CsGy1G030330 (gene) Cucumber (Gy14) v2 | Cucurbit Genomics Database (CuGenDB)

Overview


Name	CsGy1G030330
Type	gene
Organism	Cucumis sativus (Cucumber (Gy14) v2)
Description	Pentatricopeptide repeat-containing protein At4g28010
Location	Chr1 : 28586125 .. 28590224 (-)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDSexon

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGAATTCTCAAATCCATCTCCTCAAACGTTGCTCTGCTCGAGTTCTTCGTATCCACCCCTTTTCTTCGACCCCTTTGCCAAATTCTGTTTCCGATATCGATTCCCACTTAGTTTCCCTTTGCCAAAGTCTTACTCCACGAAACGCCAACCACGCCTTTTCTCTCTTTCATAGTGCCATAGCTTCTAATTCTCTTCCTTCTGGGTTTACCTGCAACGCACTCATGGCTGCTCTCACCAGGACGAGAAATTACCCAATGGCTTTATCTGTTTATGGTAAGATGACTTATGCAAATGTTTTTCTGGGTTTCAGATCACTTTGTTGTTTAATCGAATGCTTTGTTTATACTCGTGAAGTGAATTATGCGTTTGGGGTTCTGGGGTTGATTATTAAACAGGGTTATGTAGTTAGTACCTTTGTTTTCAATGTTATGCTCACGGGGTTGTGTCGAATTGGGGATGTAGAGAGAGCAATTGAGTCGTTTCATGAAATGAAAAGATTTTCGGTATTACCAGATGTGATTACTTATAATGTGCTCATGAACGGACTTTGCAAGAATGAGAAATTTGAAGAAGCGCTTCGATTTCTTGACGAAATGGAGGTGATTTGCCAGCCGAATATGGTGACATATACGACCATGGTGGATGGGCTTTGTAAGGGTGGAAGATTACAAATAGCAGAGGGTTTATTGGAGAGAATGAAGAAGAAGGGATTGCAAGCGGATGTTGTTATGTATAGTGCAGTTATAAGTGGTTTTTGTAACAATGGAAATTCCTCTAGGGGAAAAGAACTCTTCAATGAGATGCTAGAGATGGGAATTTGTCCTAATGTAGTTACATATAGTTGTTTGATGCATGGTTTATGTAAGGAAGGGCAATGGGAGGAAGCAAAGGCAATGCTGAATCTTATGACGGACCGTGGTATTTGCCCTGATGTTGTCACTTATACATGTTTGATCGACGGGCTTTGCAAAAATGGGAGAGCTAAGCAAGCCTTGAACATATTAAATCTGATGCTAGAGAAAGGTGAAGAACCTAATACTGTCACTTATAATGTTCTTCTAGATGGTCTGTGCAAAGGGGGACTAATAGAGGAGTCCTGTAAAGTCATGGATAGTATGATCAAGAAGGGGAAGAATCCTGATATTGTTACTTATAATACTTTGCTCGTAGGACTTTGCAAGGATGGGAAGGTTGATGAAGGAATTTTACTTTTTAATTCAACATTGAAGGATAACTGCCATATTAAACCTGATATTGTCACCTTTAATATGTTGATTCAAGGGCTCTGTAATGAAGGTCGTGTTGAGGAGGCTGTGGAGATCTTTAATACAATGACAGAACAAAGAATCTATGGCGACTTAATGACTTTCAATTTACTAATTGGAGGTTATCTCACAGCAGGAATGATCAACAAGGCTATGGAAATGTGGAAGCATGTATTAAACTTGGGGTTTGTTCCTAATTCAAATACCTACAGTGTAATGATTAAAGGACTTTGTGGCTTGGGTATGATTAGCATTGCTAAAGGACTTTTTGGCAGAATGAGAATACATGGGCCTAATCCAACTGTGATCGATTACAATACATTGATTTCATCCATGTGCAAGGAAGGTAGTATAGAACAAGCTAAGAGGTTGTTTCAAGAAATGAGTAATGTAAATCTAGAACCAGATATTATTACATTCAATACCATAATCAATGGATCTCTAAAAGCTGGGGATTTGTCGTATTTCCAAGAGCTACTAATGGAAATGGTTGGAAAAGGCTTAGCTCCAGATGCTGTAACATTTTCAACTTTAATTAATCGATTATCAAAAAGTGGTCTGATGTCTGAAGCTAAAATTGTTTTTGAGAAATTGATTGCTTGTGGCTTGACTCCAGATGTCTTTGTATATGATTCCTTACTAAAGGCATATCGTTTAAACAATGAAACTGCAGAAATTATTGGCTTGCTCAACGATATGGCCAAAAAGAGTGTTGTTCTTGACCAAGAATTAACTTGCACCATCTTAACATGCCTTTGCCAGAGTTCAGATCATGCTGCTATCTTGGATTCCCTGCCAAACTTTTCACAACCAACATCGGATGGAAAACAAATAACATGCAGTGAATTGTTGCTTAGACTTCATAAATCTCATCCAGAGCTTAAGTTACCTGTTGAAAATTAAAGACCAAATCTAATTTCTTAAGATCAGACTTGGTATCTTATCATCTGTTCTCTGCGAGTCCTTTATTCTTGCTATTTCATATCCTTGATCAAGGTTCACCTCCCAAACAATCTTTTTCAAGTAAGTCATTTTGCACGTTTCCCTTTTTTAATACTGACTTCTCTTACTGTCTTGTAATGTGTACAAGTTTTCTTTTAGCAACAATTTATCCATTTTGTCTCTGGCCTCTCACTCTTCCTTTTCAATTTTCCATTTGCTTCCATAATAGCATGAAAACGTCGAGTTCTAAATGAATAGATTTTCAGTTTCCATGCTGGGGATGATAAAAGCATTGAAGGAAATAAGAATAAGGATATCAAGGTGGTAACTGAGGGACTAGGTTTCTTTTCTAACGATGATACTCAGTTATACAGAATTACATTACCCTGGTCAAAATTAAATACCAATCAGGCAATACTAATATGTTCATTGAAGTATTCAATATTCAAAATTGTAGTAAAATAGATCTTCAGGGAGTTTTAGCTCTAGTTTATGATTTCGTGTACTTTTGTTTATGATTAATCATGCAGAGTTTCTTAAAATTATTGCATATAGCTGCTTCACATTTGGTTAACATCAACCATTACCAGTACATCTTTGGAGATGTATGACAGATATAATTGTTGTGGTAGTATGTTTTTTAATTTTCACGTGATTTCTGAGAGTAGACTTGCACTTCAGGAGGATGTGCTCATGGTGCTACTAAAGAATGGTGGACTAATGGGAGCGAGTGTGGTTCAATGTTCCATTGCTATGGTGTTGACAGTGTCGATCTATGATGAGGAGTCTTGTATACATTTATAGCATTTGAAGAGGATGTTCAGCTCTACACTTCTACATTTATCATCACTCTTGTGGGAAGAATTCTGTTGGTCCATTGGGATAAGGCTATGTTGTGTTTGGCCCCCATCTGCATTTCTCAGCAACATCTGTTGGGCATGTTCCAAATCCAGAAGGGTAGAAACTGTAAAAGGTAATCAATGCTTTCCACTTTCTCTTTATTGGTTTGAAGGCAAAGGAGAGGCAGGTCGCATGGCGTGGAAATGAATTTACGACATGTCTATGAGTGATCGTGATTCTAAAATGATTCATTTTTGTGATTTTTAAAAATCACTCTATAAAATGTTTTTACATATTCAAAATCAATTTTTACAGCACTGAAGAAAAAATGTGTTTACAAGTTTCATTCAACATGACAAAAGTAAATTTAGTTATTTCATTATCACTCGTAAACATGCACTTAAAACTGGCGATATATTTAAAACAGAAACGTTATCAAAAAGATCTCTAGGATGATCTCTAAGATTCCACAGTTTTGCTGGGATTGAAGACAAGTTAGGAGATTTTGCTACGTCAACGGAAGAAGCTAAGTTCTTGTTCTTTGTTGTAAGCCTGTGATTTGAAAGATGATTTTTTTCTATTGAATTTAGAACTTAAATAACATTATTGTACAACTTGTGTGTGGAATAGATCTTGTTCGGCCTATAAGTTAAATATCTTACCAGTCATCTTAGCAACTAAATATTAATAGGGTTAGATGGTGGTTGTTTGAGAATAGCTGAGACGTTCACAAGTTAACATCAACACTCTTTTTTTACATTTAGTGATGTTACAACTTTAGCTTTGGTAGACCCATTCAAAAGATGCTATACATATTTTGTAACTATGGGTACAGATGTACATGTTTGTGTAAATGAAGTTATCATAAATTTTGACATAACTTCGTTTTTAAGTATAGCATTAGAAAAATGTATTTACCATTTCTCATGAAGTATTGAAGTGGCAGGATGCTATGTTGATTGATAGTCATAAAAGAACAGAGTAGATTTATAATTATTATTATCATTCAATTAGGTGGAGGGAAATTGGATCACATCCCTCGTGATCACTAA

mRNA sequence

ATGAATTCTCAAATCCATCTCCTCAAACGTTGCTCTGCTCGAGTTCTTCGTATCCACCCCTTTTCTTCGACCCCTTTGCCAAATTCTGTTTCCGATATCGATTCCCACTTAGTTTCCCTTTGCCAAAGTCTTACTCCACGAAACGCCAACCACGCCTTTTCTCTCTTTCATAGTGCCATAGCTTCTAATTCTCTTCCTTCTGGGTTTACCTGCAACGCACTCATGGCTGCTCTCACCAGGACGAGAAATTACCCAATGGCTTTATCTGTTTATGGTAAGATGACTTATGCAAATGTTTTTCTGGGTTTCAGATCACTTTGTTGTTTAATCGAATGCTTTGTTTATACTCGTGAAGTGAATTATGCGTTTGGGGTTCTGGGGTTGATTATTAAACAGGGTTATGTAGTTAGTACCTTTGTTTTCAATGTTATGCTCACGGGGTTGTGTCGAATTGGGGATGTAGAGAGAGCAATTGAGTCGTTTCATGAAATGAAAAGATTTTCGGTATTACCAGATGTGATTACTTATAATGTGCTCATGAACGGACTTTGCAAGAATGAGAAATTTGAAGAAGCGCTTCGATTTCTTGACGAAATGGAGGTGATTTGCCAGCCGAATATGGTGACATATACGACCATGGTGGATGGGCTTTGTAAGGGTGGAAGATTACAAATAGCAGAGGGTTTATTGGAGAGAATGAAGAAGAAGGGATTGCAAGCGGATGTTGTTATGTATAGTGCAGTTATAAGTGGTTTTTGTAACAATGGAAATTCCTCTAGGGGAAAAGAACTCTTCAATGAGATGCTAGAGATGGGAATTTGTCCTAATGTAGTTACATATAGTTGTTTGATGCATGGTTTATGTAAGGAAGGGCAATGGGAGGAAGCAAAGGCAATGCTGAATCTTATGACGGACCGTGGTATTTGCCCTGATGTTGTCACTTATACATGTTTGATCGACGGGCTTTGCAAAAATGGGAGAGCTAAGCAAGCCTTGAACATATTAAATCTGATGCTAGAGAAAGGTGAAGAACCTAATACTGTCACTTATAATGTTCTTCTAGATGGTCTGTGCAAAGGGGGACTAATAGAGGAGTCCTGTAAAGTCATGGATAGTATGATCAAGAAGGGGAAGAATCCTGATATTGTTACTTATAATACTTTGCTCGTAGGACTTTGCAAGGATGGGAAGGTTGATGAAGGAATTTTACTTTTTAATTCAACATTGAAGGATAACTGCCATATTAAACCTGATATTGTCACCTTTAATATGTTGATTCAAGGGCTCTGTAATGAAGGTCGTGTTGAGGAGGCTGTGGAGATCTTTAATACAATGACAGAACAAAGAATCTATGGCGACTTAATGACTTTCAATTTACTAATTGGAGGTTATCTCACAGCAGGAATGATCAACAAGGCTATGGAAATGTGGAAGCATGTATTAAACTTGGGGTTTGTTCCTAATTCAAATACCTACAGTGTAATGATTAAAGGACTTTGTGGCTTGGGTATGATTAGCATTGCTAAAGGACTTTTTGGCAGAATGAGAATACATGGGCCTAATCCAACTGTGATCGATTACAATACATTGATTTCATCCATGTGCAAGGAAGGTAGTATAGAACAAGCTAAGAGGTTGTTTCAAGAAATGAGTAATGTAAATCTAGAACCAGATATTATTACATTCAATACCATAATCAATGGATCTCTAAAAGCTGGGGATTTGTCGTATTTCCAAGAGCTACTAATGGAAATGGTTGGAAAAGGCTTAGCTCCAGATGCTGTAACATTTTCAACTTTAATTAATCGATTATCAAAAAGTGGTCTGATGTCTGAAGCTAAAATTGTTTTTGAGAAATTGATTGCTTGTGGCTTGACTCCAGATGTCTTTGTATATGATTCCTTACTAAAGGCATATCGTTTAAACAATGAAACTGCAGAAATTATTGGCTTGCTCAACGATATGGCCAAAAAGAGTGTTGTTCTTGACCAAGAATTAACTTGCACCATCTTAACATGCCTTTGCCAGAGTTCAGATCATGCTGCTATCTTGGATTCCCTGCCAAACTTTTCACAACCAACATCGGATGGAAAACAAATAACATGCAGTGAATTGTTGCTTAGACTTCATAAATCTCATCCAGAGCTTAAGTTACCTGAGGATGTGCTCATGGTGCTACTAAAGAATGGTGGACTAATGGGAGCGAGTGTGGTTCAATGTTCCATTGCTATGGTGTTGACAGTGTCGATCTATGATGAGGAGTCTTGTGGAGGGAAATTGGATCACATCCCTCGTGATCACTAA

Coding sequence (CDS)

ATGAATTCTCAAATCCATCTCCTCAAACGTTGCTCTGCTCGAGTTCTTCGTATCCACCCCTTTTCTTCGACCCCTTTGCCAAATTCTGTTTCCGATATCGATTCCCACTTAGTTTCCCTTTGCCAAAGTCTTACTCCACGAAACGCCAACCACGCCTTTTCTCTCTTTCATAGTGCCATAGCTTCTAATTCTCTTCCTTCTGGGTTTACCTGCAACGCACTCATGGCTGCTCTCACCAGGACGAGAAATTACCCAATGGCTTTATCTGTTTATGGTAAGATGACTTATGCAAATGTTTTTCTGGGTTTCAGATCACTTTGTTGTTTAATCGAATGCTTTGTTTATACTCGTGAAGTGAATTATGCGTTTGGGGTTCTGGGGTTGATTATTAAACAGGGTTATGTAGTTAGTACCTTTGTTTTCAATGTTATGCTCACGGGGTTGTGTCGAATTGGGGATGTAGAGAGAGCAATTGAGTCGTTTCATGAAATGAAAAGATTTTCGGTATTACCAGATGTGATTACTTATAATGTGCTCATGAACGGACTTTGCAAGAATGAGAAATTTGAAGAAGCGCTTCGATTTCTTGACGAAATGGAGGTGATTTGCCAGCCGAATATGGTGACATATACGACCATGGTGGATGGGCTTTGTAAGGGTGGAAGATTACAAATAGCAGAGGGTTTATTGGAGAGAATGAAGAAGAAGGGATTGCAAGCGGATGTTGTTATGTATAGTGCAGTTATAAGTGGTTTTTGTAACAATGGAAATTCCTCTAGGGGAAAAGAACTCTTCAATGAGATGCTAGAGATGGGAATTTGTCCTAATGTAGTTACATATAGTTGTTTGATGCATGGTTTATGTAAGGAAGGGCAATGGGAGGAAGCAAAGGCAATGCTGAATCTTATGACGGACCGTGGTATTTGCCCTGATGTTGTCACTTATACATGTTTGATCGACGGGCTTTGCAAAAATGGGAGAGCTAAGCAAGCCTTGAACATATTAAATCTGATGCTAGAGAAAGGTGAAGAACCTAATACTGTCACTTATAATGTTCTTCTAGATGGTCTGTGCAAAGGGGGACTAATAGAGGAGTCCTGTAAAGTCATGGATAGTATGATCAAGAAGGGGAAGAATCCTGATATTGTTACTTATAATACTTTGCTCGTAGGACTTTGCAAGGATGGGAAGGTTGATGAAGGAATTTTACTTTTTAATTCAACATTGAAGGATAACTGCCATATTAAACCTGATATTGTCACCTTTAATATGTTGATTCAAGGGCTCTGTAATGAAGGTCGTGTTGAGGAGGCTGTGGAGATCTTTAATACAATGACAGAACAAAGAATCTATGGCGACTTAATGACTTTCAATTTACTAATTGGAGGTTATCTCACAGCAGGAATGATCAACAAGGCTATGGAAATGTGGAAGCATGTATTAAACTTGGGGTTTGTTCCTAATTCAAATACCTACAGTGTAATGATTAAAGGACTTTGTGGCTTGGGTATGATTAGCATTGCTAAAGGACTTTTTGGCAGAATGAGAATACATGGGCCTAATCCAACTGTGATCGATTACAATACATTGATTTCATCCATGTGCAAGGAAGGTAGTATAGAACAAGCTAAGAGGTTGTTTCAAGAAATGAGTAATGTAAATCTAGAACCAGATATTATTACATTCAATACCATAATCAATGGATCTCTAAAAGCTGGGGATTTGTCGTATTTCCAAGAGCTACTAATGGAAATGGTTGGAAAAGGCTTAGCTCCAGATGCTGTAACATTTTCAACTTTAATTAATCGATTATCAAAAAGTGGTCTGATGTCTGAAGCTAAAATTGTTTTTGAGAAATTGATTGCTTGTGGCTTGACTCCAGATGTCTTTGTATATGATTCCTTACTAAAGGCATATCGTTTAAACAATGAAACTGCAGAAATTATTGGCTTGCTCAACGATATGGCCAAAAAGAGTGTTGTTCTTGACCAAGAATTAACTTGCACCATCTTAACATGCCTTTGCCAGAGTTCAGATCATGCTGCTATCTTGGATTCCCTGCCAAACTTTTCACAACCAACATCGGATGGAAAACAAATAACATGCAGTGAATTGTTGCTTAGACTTCATAAATCTCATCCAGAGCTTAAGTTACCTGAGGATGTGCTCATGGTGCTACTAAAGAATGGTGGACTAATGGGAGCGAGTGTGGTTCAATGTTCCATTGCTATGGTGTTGACAGTGTCGATCTATGATGAGGAGTCTTGTGGAGGGAAATTGGATCACATCCCTCGTGATCACTAA

Protein sequence

MNSQIHLLKRCSARVLRIHPFSSTPLPNSVSDIDSHLVSLCQSLTPRNANHAFSLFHSAIASNSLPSGFTCNALMAALTRTRNYPMALSVYGKMTYANVFLGFRSLCCLIECFVYTREVNYAFGVLGLIIKQGYVVSTFVFNVMLTGLCRIGDVERAIESFHEMKRFSVLPDVITYNVLMNGLCKNEKFEEALRFLDEMEVICQPNMVTYTTMVDGLCKGGRLQIAEGLLERMKKKGLQADVVMYSAVISGFCNNGNSSRGKELFNEMLEMGICPNVVTYSCLMHGLCKEGQWEEAKAMLNLMTDRGICPDVVTYTCLIDGLCKNGRAKQALNILNLMLEKGEEPNTVTYNVLLDGLCKGGLIEESCKVMDSMIKKGKNPDIVTYNTLLVGLCKDGKVDEGILLFNSTLKDNCHIKPDIVTFNMLIQGLCNEGRVEEAVEIFNTMTEQRIYGDLMTFNLLIGGYLTAGMINKAMEMWKHVLNLGFVPNSNTYSVMIKGLCGLGMISIAKGLFGRMRIHGPNPTVIDYNTLISSMCKEGSIEQAKRLFQEMSNVNLEPDIITFNTIINGSLKAGDLSYFQELLMEMVGKGLAPDAVTFSTLINRLSKSGLMSEAKIVFEKLIACGLTPDVFVYDSLLKAYRLNNETAEIIGLLNDMAKKSVVLDQELTCTILTCLCQSSDHAAILDSLPNFSQPTSDGKQITCSELLLRLHKSHPELKLPEDVLMVLLKNGGLMGASVVQCSIAMVLTVSIYDEESCGGKLDHIPRDH

Homology

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BLAST of CsGy1G030330 vs. NCBI nr
Match: XP_011660167.1 (PREDICTED: pentatricopeptide repeat-containing protein At4g28010 [Cucumis sativus])

HSP 1 Score: 374.8 bits (961), Expect = 7.1e-100
Identity = 719/719 (100.00%), Postives = 719/719 (100.00%), Query Frame = 0


Query: 1   MNSQIHLLKRCSARVLRIHPFSSTPLPNSVSDIDSHLVSLCQSLTPRNANHAFSLFHSAI 60
           MNSQIHLLKRCSARVLRIHPFSSTPLPNSVSDIDSHLVSLCQSLTPRNANHAFSLFHSAI
Sbjct: 1   MNSQIHLLKRCSARVLRIHPFSSTPLPNSVSDIDSHLVSLCQSLTPRNANHAFSLFHSAI 60

Query: 61  ASNSLPSGFTCNALMAALTRTRNYPMALSVYGKMTYANVFLGFRSLCCLIECFVYTREVN 120
           ASNSLPSGFTCNALMAALTRTRNYPMALSVYGKMTYANVFLGFRSLCCLIECFVYTREVN
Sbjct: 61  ASNSLPSGFTCNALMAALTRTRNYPMALSVYGKMTYANVFLGFRSLCCLIECFVYTREVN 120

Query: 121 YAFGVLGLIIKQGYVVSTFVFNVMLTGLCRIGDVERAIESFHEMKRFSVLPDVXXXXXXX 180
           YAFGVLGLIIKQGYVVSTFVFNVMLTGLCRIGDVERAIESFHEMKRFSVLPDVXXXXXXX
Sbjct: 121 YAFGVLGLIIKQGYVVSTFVFNVMLTGLCRIGDVERAIESFHEMKRFSVLPDVXXXXXXX 180

Query: 181 XXXXXXXXXXXXXXXXXXXEVICQXXXXXXXXXXXXXXXXXXXXXXXXXXXXXKKKGLXX 240
           XXXXXXXXXXXXXXXXXXXEVICQXXXXXXXXXXXXXXXXXXXXXXXXXXXXXKKKGLXX
Sbjct: 181 XXXXXXXXXXXXXXXXXXXEVICQXXXXXXXXXXXXXXXXXXXXXXXXXXXXXKKKGLXX 240

Query: 241 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 300
           XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
Sbjct: 241 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 300

Query: 301 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 360
           XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
Sbjct: 301 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 360

Query: 361 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXDNCHIXXXXX 420
           XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXDNCHIXXXXX
Sbjct: 361 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXDNCHIXXXXX 420

Query: 421 XXXXXXXXXXXXXXXXXXXXXXXXXTEQRXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 480
           XXXXXXXXXXXXXXXXXXXXXXXXXTEQRXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
Sbjct: 421 XXXXXXXXXXXXXXXXXXXXXXXXXTEQRXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 480

Query: 481 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 540
           XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
Sbjct: 481 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 540

Query: 541 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 600
           XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
Sbjct: 541 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 600

Query: 601 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXYRLNNETAEIIGLLNDMAKKSV 660
           XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXYRLNNETAEIIGLLNDMAKKSV
Sbjct: 601 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXYRLNNETAEIIGLLNDMAKKSV 660

Query: 661 VLDQELTCTILTCLCQSSDHAAILDSLPNFSQPTSDGKQITCSELLLRLHKSHPELKLP 720
           VLDQELTCTILTCLCQSSDHAAILDSLPNFSQPTSDGKQITCSELLLRLHKSHPELKLP
Sbjct: 661 VLDQELTCTILTCLCQSSDHAAILDSLPNFSQPTSDGKQITCSELLLRLHKSHPELKLP 719

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BLAST of CsGy1G030330 vs. NCBI nr
Match: KGN66556.1 (hypothetical protein Csa_1G629130 [Cucumis sativus])

HSP 1 Score: 346.3 bits (887), Expect = 2.7e-91
Identity = 204/204 (100.00%), Postives = 204/204 (100.00%), Query Frame = 0


Query: 1   MNSQIHLLKRCSARVLRIHPFSSTPLPNSVSDIDSHLVSLCQSLTPRNANHAFSLFHSAI 60
           MNSQIHLLKRCSARVLRIHPFSSTPLPNSVSDIDSHLVSLCQSLTPRNANHAFSLFHSAI
Sbjct: 1   MNSQIHLLKRCSARVLRIHPFSSTPLPNSVSDIDSHLVSLCQSLTPRNANHAFSLFHSAI 60

Query: 61  ASNSLPSGFTCNALMAALTRTRNYPMALSVYGKMTYANVFLGFRSLCCLIECFVYTREVN 120
           ASNSLPSGFTCNALMAALTRTRNYPMALSVYGKMTYANVFLGFRSLCCLIECFVYTREVN
Sbjct: 61  ASNSLPSGFTCNALMAALTRTRNYPMALSVYGKMTYANVFLGFRSLCCLIECFVYTREVN 120

Query: 121 YAFGVLGLIIKQGYVVSTFVFNVMLTGLCRIGDVERAIESFHEMKRFSVLPDVXXXXXXX 180
           YAFGVLGLIIKQGYVVSTFVFNVMLTGLCRIGDVERAIESFHEMKRFSVLPDVXXXXXXX
Sbjct: 121 YAFGVLGLIIKQGYVVSTFVFNVMLTGLCRIGDVERAIESFHEMKRFSVLPDVXXXXXXX 180

Query: 181 XXXXXXXXXXXXXXXXXXXEVICQ 205
           XXXXXXXXXXXXXXXXXXXEVICQ
Sbjct: 181 XXXXXXXXXXXXXXXXXXXEVICQ 204

[Close]

BLAST of CsGy1G030330 vs. NCBI nr
Match: XP_008450333.1 (PREDICTED: pentatricopeptide repeat-containing protein At4g28010 [Cucumis melo] >XP_008450334.1 PREDICTED: pentatricopeptide repeat-containing protein At4g28010 [Cucumis melo] >XP_008450335.1 PREDICTED: pentatricopeptide repeat-containing protein At4g28010 [Cucumis melo] >XP_008450337.1 PREDICTED: pentatricopeptide repeat-containing protein At4g28010 [Cucumis melo] >XP_016900904.1 PREDICTED: pentatricopeptide repeat-containing protein At4g28010 [Cucumis melo])

HSP 1 Score: 314.3 bits (804), Expect = 1.1e-81
Identity = 157/169 (92.90%), Postives = 162/169 (95.86%), Query Frame = 0


Query: 1   MNSQIHLLKRCSARVLRIHPFSSTPLPNSVSDIDSHLVSLCQSLTPRNANHAFSLFHSAI 60
           MNSQ HLLKRCSARVLRIHPFSSTPLPNSVSD+DSHLVSLCQ+LTPRNANHAFSLFH++I
Sbjct: 1   MNSQTHLLKRCSARVLRIHPFSSTPLPNSVSDVDSHLVSLCQNLTPRNANHAFSLFHTSI 60

Query: 61  ASNSLPSGFTCNALMAALTRTRNYPMALSVYGKMTYANVFLGFRSLCCLIECFVYTREVN 120
           ASNSLPSG TCN LMAALTRTRNYPMALSVYGKMT ANVFLGFRSLCCLIECF+YTREVN
Sbjct: 61  ASNSLPSGLTCNFLMAALTRTRNYPMALSVYGKMTDANVFLGFRSLCCLIECFIYTREVN 120

Query: 121 YAFGVLGLIIKQGYVVSTFVFNVMLTGLCRIGDVERAIESFHEMKRFSV 170
            AFGVLGLIIKQGYVVSTFVFNVMLTGLCRIGDVERAI  FHEMKRFSV
Sbjct: 121 SAFGVLGLIIKQGYVVSTFVFNVMLTGLCRIGDVERAIGLFHEMKRFSV 169

[Close]

BLAST of CsGy1G030330 vs. NCBI nr
Match: XP_022961234.1 (pentatricopeptide repeat-containing protein At4g28010-like [Cucurbita moschata] >XP_022961235.1 pentatricopeptide repeat-containing protein At4g28010-like [Cucurbita moschata])

HSP 1 Score: 300.8 bits (769), Expect = 1.3e-77
Identity = 151/176 (85.80%), Postives = 162/176 (92.05%), Query Frame = 0


Query: 1   MNSQIHLLKRCSARVLRIH---PFSSTPLPNSVSDIDSHLVSLCQSLTPRNANHAFSLFH 60
           MNSQ HLLKRC  RVLRIH   PFSS PLPNSVSDIDSHLVSLC++LTPRNAN AFS+FH
Sbjct: 1   MNSQAHLLKRCPVRVLRIHYIQPFSSIPLPNSVSDIDSHLVSLCKNLTPRNANEAFSVFH 60

Query: 61  SAIASNSLPSGFTCNALMAALTRTRNYPMALSVYGKMTYANVFLGFRSLCCLIECFVYTR 120
           SAIASNSLPSG TCN+LMAALTRTRNY MALSVYGKM++ANVF+GFRSLCCLIECFVYTR
Sbjct: 61  SAIASNSLPSGLTCNSLMAALTRTRNYEMALSVYGKMSFANVFVGFRSLCCLIECFVYTR 120

Query: 121 EVNYAFGVLGLIIKQGYVVSTFVFNVMLTGLCRIGDVERAIESFHEMKRFSVLPDV 174
            V +AFGV+GLIIKQGY+VSTFVFNVMLTGLCRIGDV+RA E FHEMKRFSVLPDV
Sbjct: 121 GVKFAFGVVGLIIKQGYIVSTFVFNVMLTGLCRIGDVKRATELFHEMKRFSVLPDV 176

[Close]

BLAST of CsGy1G030330 vs. NCBI nr
Match: XP_023516928.1 (pentatricopeptide repeat-containing protein At4g28010-like [Cucurbita pepo subsp. pepo] >XP_023516929.1 pentatricopeptide repeat-containing protein At4g28010-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 297.0 bits (759), Expect = 1.9e-76
Identity = 147/176 (83.52%), Postives = 162/176 (92.05%), Query Frame = 0


Query: 1   MNSQIHLLKRCSARVLRIH---PFSSTPLPNSVSDIDSHLVSLCQSLTPRNANHAFSLFH 60
           MN+Q HLLKRC  RVLRIH   PFSS PLPNSV+DIDSHL+SLC++LTPRNAN AFS+FH
Sbjct: 1   MNAQAHLLKRCPVRVLRIHYIQPFSSIPLPNSVNDIDSHLISLCKNLTPRNANEAFSVFH 60

Query: 61  SAIASNSLPSGFTCNALMAALTRTRNYPMALSVYGKMTYANVFLGFRSLCCLIECFVYTR 120
           +AIASNSLPSG TCN+LMAALTRTRNY MALSVYGKM++ANVF+GFRSLCCLIECFVYTR
Sbjct: 61  NAIASNSLPSGLTCNSLMAALTRTRNYEMALSVYGKMSFANVFVGFRSLCCLIECFVYTR 120

Query: 121 EVNYAFGVLGLIIKQGYVVSTFVFNVMLTGLCRIGDVERAIESFHEMKRFSVLPDV 174
            V +AFGV+GLIIKQGY+VSTFVFNVMLTGLCRIGDV+RA E FHEMKRFSVLPDV
Sbjct: 121 GVKFAFGVVGLIIKQGYIVSTFVFNVMLTGLCRIGDVKRATELFHEMKRFSVLPDV 176

[Close]

BLAST of CsGy1G030330 vs. TAIR10
Match: AT4G28010.1 (Tetratricopeptide repeat (TPR)-like superfamily protein)

HSP 1 Score: 56.2 bits (134), Expect = 1.0e-07
Identity = 37/95 (38.95%), Postives = 54/95 (56.84%), Query Frame = 0


Query: 18  IHPFSSTPLPNSVSDIDSHLVSLCQSLTPRNANHAFSLFHSAIASNSLPSGFTCNALMAA 77
           ++P   + L N+ S+ ++ L SLC+   P+  N A S+F  A+ S S    F  N LMA 
Sbjct: 24  LNPRVYSKLVNAFSETETKLRSLCEDSNPQLKN-AVSVFQQAVDSGS-SLAFAGNNLMAK 83

Query: 78  LTRTRNYPMALSVYGKMTYANVFLGFRSLCCLIEC 113
           L R+RN+ +A S Y KM   + F+ F SL  L+EC
Sbjct: 84  LVRSRNHELAFSFYRKMLETDTFINFVSLSGLLEC 116

[Close]

BLAST of CsGy1G030330 vs. TAIR10
Match: AT1G12775.1 (Pentatricopeptide repeat (PPR) superfamily protein)

HSP 1 Score: 53.1 bits (126), Expect = 8.6e-07
Identity = 32/106 (30.19%), Postives = 52/106 (49.06%), Query Frame = 0


Query: 35  SHLVSLCQSLTPRNANHAFSLFHSAIASNSLPSGFTCNALMAALTRTRNYPMALSVYGKM 94
           S+   L   L    A+ A  LF   I S  LP+    N L +A+ +T+ Y + L++  +M
Sbjct: 55  SYRDKLSSGLVGIKADDAVDLFRDMIQSRPLPTVIDFNRLFSAIAKTKQYELVLALCKQM 114

Query: 95  TYANVFLGFRSLCCLIECFVYTREVNYAFGVLGLIIKQGYVVSTFV 141
               +     +L  +I CF   R+++YAF  +G I+K GY   T +
Sbjct: 115 ESKGIAHSIYTLSIMINCFCRCRKLSYAFSTMGKIMKLGYEPDTVI 160

[Close]

BLAST of CsGy1G030330 vs. Swiss-Prot
Match: sp|Q9SUD8|PP340_ARATH (Pentatricopeptide repeat-containing protein At4g28010 OS=Arabidopsis thaliana OX=3702 GN=At4g28010 PE=2 SV=1)

HSP 1 Score: 56.2 bits (134), Expect = 1.8e-06
Identity = 37/95 (38.95%), Postives = 54/95 (56.84%), Query Frame = 0


Query: 18  IHPFSSTPLPNSVSDIDSHLVSLCQSLTPRNANHAFSLFHSAIASNSLPSGFTCNALMAA 77
           ++P   + L N+ S+ ++ L SLC+   P+  N A S+F  A+ S S    F  N LMA 
Sbjct: 24  LNPRVYSKLVNAFSETETKLRSLCEDSNPQLKN-AVSVFQQAVDSGS-SLAFAGNNLMAK 83

Query: 78  LTRTRNYPMALSVYGKMTYANVFLGFRSLCCLIEC 113
           L R+RN+ +A S Y KM   + F+ F SL  L+EC
Sbjct: 84  LVRSRNHELAFSFYRKMLETDTFINFVSLSGLLEC 116

[Close]

BLAST of CsGy1G030330 vs. Swiss-Prot
Match: sp|Q9LPX2|PPR39_ARATH (Pentatricopeptide repeat-containing protein At1g12775, mitochondrial OS=Arabidopsis thaliana OX=3702 GN=At1g12775 PE=2 SV=1)

HSP 1 Score: 53.1 bits (126), Expect = 1.5e-05
Identity = 32/106 (30.19%), Postives = 52/106 (49.06%), Query Frame = 0


Query: 35  SHLVSLCQSLTPRNANHAFSLFHSAIASNSLPSGFTCNALMAALTRTRNYPMALSVYGKM 94
           S+   L   L    A+ A  LF   I S  LP+    N L +A+ +T+ Y + L++  +M
Sbjct: 55  SYRDKLSSGLVGIKADDAVDLFRDMIQSRPLPTVIDFNRLFSAIAKTKQYELVLALCKQM 114

Query: 95  TYANVFLGFRSLCCLIECFVYTREVNYAFGVLGLIIKQGYVVSTFV 141
               +     +L  +I CF   R+++YAF  +G I+K GY   T +
Sbjct: 115 ESKGIAHSIYTLSIMINCFCRCRKLSYAFSTMGKIMKLGYEPDTVI 160

[Close]

BLAST of CsGy1G030330 vs. TrEMBL
Match: tr|A0A0A0M2Y3|A0A0A0M2Y3_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_1G629130 PE=4 SV=1)

HSP 1 Score: 346.3 bits (887), Expect = 1.8e-91
Identity = 204/204 (100.00%), Postives = 204/204 (100.00%), Query Frame = 0


Query: 1   MNSQIHLLKRCSARVLRIHPFSSTPLPNSVSDIDSHLVSLCQSLTPRNANHAFSLFHSAI 60
           MNSQIHLLKRCSARVLRIHPFSSTPLPNSVSDIDSHLVSLCQSLTPRNANHAFSLFHSAI
Sbjct: 1   MNSQIHLLKRCSARVLRIHPFSSTPLPNSVSDIDSHLVSLCQSLTPRNANHAFSLFHSAI 60

Query: 61  ASNSLPSGFTCNALMAALTRTRNYPMALSVYGKMTYANVFLGFRSLCCLIECFVYTREVN 120
           ASNSLPSGFTCNALMAALTRTRNYPMALSVYGKMTYANVFLGFRSLCCLIECFVYTREVN
Sbjct: 61  ASNSLPSGFTCNALMAALTRTRNYPMALSVYGKMTYANVFLGFRSLCCLIECFVYTREVN 120

Query: 121 YAFGVLGLIIKQGYVVSTFVFNVMLTGLCRIGDVERAIESFHEMKRFSVLPDVXXXXXXX 180
           YAFGVLGLIIKQGYVVSTFVFNVMLTGLCRIGDVERAIESFHEMKRFSVLPDVXXXXXXX
Sbjct: 121 YAFGVLGLIIKQGYVVSTFVFNVMLTGLCRIGDVERAIESFHEMKRFSVLPDVXXXXXXX 180

Query: 181 XXXXXXXXXXXXXXXXXXXEVICQ 205
           XXXXXXXXXXXXXXXXXXXEVICQ
Sbjct: 181 XXXXXXXXXXXXXXXXXXXEVICQ 204

[Close]

BLAST of CsGy1G030330 vs. TrEMBL
Match: tr|A0A1S3BP21|A0A1S3BP21_CUCME (pentatricopeptide repeat-containing protein At4g28010 OS=Cucumis melo OX=3656 GN=LOC103491973 PE=4 SV=1)

HSP 1 Score: 314.3 bits (804), Expect = 7.5e-82
Identity = 157/169 (92.90%), Postives = 162/169 (95.86%), Query Frame = 0


Query: 1   MNSQIHLLKRCSARVLRIHPFSSTPLPNSVSDIDSHLVSLCQSLTPRNANHAFSLFHSAI 60
           MNSQ HLLKRCSARVLRIHPFSSTPLPNSVSD+DSHLVSLCQ+LTPRNANHAFSLFH++I
Sbjct: 1   MNSQTHLLKRCSARVLRIHPFSSTPLPNSVSDVDSHLVSLCQNLTPRNANHAFSLFHTSI 60

Query: 61  ASNSLPSGFTCNALMAALTRTRNYPMALSVYGKMTYANVFLGFRSLCCLIECFVYTREVN 120
           ASNSLPSG TCN LMAALTRTRNYPMALSVYGKMT ANVFLGFRSLCCLIECF+YTREVN
Sbjct: 61  ASNSLPSGLTCNFLMAALTRTRNYPMALSVYGKMTDANVFLGFRSLCCLIECFIYTREVN 120

Query: 121 YAFGVLGLIIKQGYVVSTFVFNVMLTGLCRIGDVERAIESFHEMKRFSV 170
            AFGVLGLIIKQGYVVSTFVFNVMLTGLCRIGDVERAI  FHEMKRFSV
Sbjct: 121 SAFGVLGLIIKQGYVVSTFVFNVMLTGLCRIGDVERAIGLFHEMKRFSV 169

[Close]

BLAST of CsGy1G030330 vs. TrEMBL
Match: tr|A0A0A0LXI9|A0A0A0LXI9_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_1G629120 PE=4 SV=1)

HSP 1 Score: 165.2 bits (417), Expect = 5.6e-37
Identity = 81/81 (100.00%), Postives = 81/81 (100.00%), Query Frame = 0


Query: 639 YRLNNETAEIIGLLNDMAKKSVVLDQELTCTILTCLCQSSDHAAILDSLPNFSQPTSDGK 698
           YRLNNETAEIIGLLNDMAKKSVVLDQELTCTILTCLCQSSDHAAILDSLPNFSQPTSDGK
Sbjct: 195 YRLNNETAEIIGLLNDMAKKSVVLDQELTCTILTCLCQSSDHAAILDSLPNFSQPTSDGK 254

Query: 699 QITCSELLLRLHKSHPELKLP 720
           QITCSELLLRLHKSHPELKLP
Sbjct: 255 QITCSELLLRLHKSHPELKLP 275

[Close]

BLAST of CsGy1G030330 vs. TrEMBL
Match: tr|A0A251RHV0|A0A251RHV0_PRUPE (Uncharacterized protein OS=Prunus persica OX=3760 GN=PRUPE_1G547200 PE=4 SV=1)

HSP 1 Score: 138.7 bits (348), Expect = 5.7e-29
Identity = 74/152 (48.68%), Postives = 99/152 (65.13%), Query Frame = 0


Query: 21  FSSTPLPNSVSDIDSHLVSLCQSLTPRNANHAFSLFHSAIASNSLPSGFTCNALMAALTR 80
           FSS P   S SDI++ L  LC    P+  + A SLF  +I S+ LPSG TCN L+  LTR
Sbjct: 27  FSSIPSTYSCSDIETQLRFLCDKSNPQ-ISEAVSLFQGSIDSDRLPSGGTCNLLVHTLTR 86

Query: 81  TRNYPMALSVYGKMTYANVFLGFRSLCCLIECFVYTREVNYAFGVLGLIIKQGYVVSTFV 140
           ++NY +A SVY KMT+  +F  F SL CL+ CFV T    +A GVLGL++K+G+ ++ +V
Sbjct: 87  SKNYELAFSVYSKMTHVGIFPSFISLSCLVACFVNTNHAKFAPGVLGLVLKRGFQLNVYV 146

Query: 141 FNVMLTGLCRIGDVERAIESFHEMKRFSVLPD 173
            N+ML GLC  G+VE+A+E F  M R  V PD
Sbjct: 147 VNLMLKGLCSNGEVEKAMELFSVMGRNCVTPD 177

[Close]

BLAST of CsGy1G030330 vs. TrEMBL
Match: tr|A0A067L445|A0A067L445_JATCU (Uncharacterized protein OS=Jatropha curcas OX=180498 GN=JCGZ_22758 PE=4 SV=1)

HSP 1 Score: 126.3 bits (316), Expect = 2.9e-25
Identity = 70/156 (44.87%), Postives = 103/156 (66.03%), Query Frame = 0


Query: 18  IHPFSSTPLPNSVSDIDSHLVSLCQSLTPRNANHAFSLFHSAIASNSLPSGFTCNALMAA 77
           IH F    L +S+SD+++ L  LC+   P+  + A S+FH AI S+   S   C +L+A+
Sbjct: 21  IHSF-HCKLFSSLSDVEAQLRFLCEEPNPQ-LSEAVSVFHRAIDSSLFLSESACTSLIAS 80

Query: 78  LTRTRNYPMALSVYGKMTYANVFLGFRSLCCLIECFVYTREVNYAFGVLGLIIKQGYVVS 137
           L +++NY +A SVY KMT+  +   F SL  LI+CFV+ +++N+AF VLGLI+K+G+VVS
Sbjct: 81  LVKSKNYELAFSVYIKMTHVGILPSFISLSRLIDCFVHIQKLNFAFAVLGLILKRGFVVS 140

Query: 138 TFVFNVMLTGLCRIGDVERAIESFHEMKRFSVLPDV 174
           +++ N+ML GLCR G    AI    EMKR  V PD+
Sbjct: 141 SYIMNLMLKGLCRNGKAFEAIYLLREMKRSLVSPDI 174

The following BLAST results are available for this feature:

BLAST of CsGy1G030330 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_011660167.1	7.1e-100	100.00	PREDICTED: pentatricopeptide repeat-containing protein At4g28010 [Cucumis sativu...	[more]
KGN66556.1	2.7e-91	100.00	hypothetical protein Csa_1G629130 [Cucumis sativus]	[more]
XP_008450333.1	1.1e-81	92.90	PREDICTED: pentatricopeptide repeat-containing protein At4g28010 [Cucumis melo] ...	[more]
XP_022961234.1	1.3e-77	85.80	pentatricopeptide repeat-containing protein At4g28010-like [Cucurbita moschata] ...	[more]
XP_023516928.1	1.9e-76	83.52	pentatricopeptide repeat-containing protein At4g28010-like [Cucurbita pepo subsp...	[more]

BLAST of CsGy1G030330 vs. TAIR10


Match Name	E-value	Identity	Description
AT4G28010.1	1.0e-07	38.95	Tetratricopeptide repeat (TPR)-like superfamily protein	[more]
AT1G12775.1	8.6e-07	30.19	Pentatricopeptide repeat (PPR) superfamily protein	[more]

BLAST of CsGy1G030330 vs. Swiss-Prot


Match Name	E-value	Identity	Description
sp\|Q9SUD8\|PP340_ARATH	1.8e-06	38.95	Pentatricopeptide repeat-containing protein At4g28010 OS=Arabidopsis thaliana OX...	[more]
sp\|Q9LPX2\|PPR39_ARATH	1.5e-05	30.19	Pentatricopeptide repeat-containing protein At1g12775, mitochondrial OS=Arabidop...	[more]

BLAST of CsGy1G030330 vs. TrEMBL


Match Name	E-value	Identity	Description
tr\|A0A0A0M2Y3\|A0A0A0M2Y3_CUCSA	1.8e-91	100.00	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_1G629130 PE=4 SV=1	[more]
tr\|A0A1S3BP21\|A0A1S3BP21_CUCME	7.5e-82	92.90	pentatricopeptide repeat-containing protein At4g28010 OS=Cucumis melo OX=3656 GN...	[more]
tr\|A0A0A0LXI9\|A0A0A0LXI9_CUCSA	5.6e-37	100.00	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_1G629120 PE=4 SV=1	[more]
tr\|A0A251RHV0\|A0A251RHV0_PRUPE	5.7e-29	48.68	Uncharacterized protein OS=Prunus persica OX=3760 GN=PRUPE_1G547200 PE=4 SV=1	[more]
tr\|A0A067L445\|A0A067L445_JATCU	2.9e-25	44.87	Uncharacterized protein OS=Jatropha curcas OX=180498 GN=JCGZ_22758 PE=4 SV=1	[more]

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **Molecular Function**
Term	Definition
GO:0005515	protein binding

Vocabulary: **INTERPRO**
Term	Definition
IPR002885	Pentatricopeptide_repeat
IPR011990	TPR-like_helical_dom_sf

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0008150	biological_process
cellular_component	GO:0016021	integral component of membrane
cellular_component	GO:0005575	cellular_component
molecular_function	GO:0003674	molecular_function
molecular_function	GO:0005515	protein binding

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CsGy1G030330.1	CsGy1G030330.1	mRNA

InterPro

Analysis Name: InterPro Annotations of cucumber Gy14 genome (v2)
Date Performed: 2018-09-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR011990	Tetratricopeptide-like helical domain superfamily	GENE3D	G3DSA:1.25.40.10		coord: 164..238 e-value: 3.1E-24 score: 87.5 coord: 374..448 e-value: 2.6E-21 score: 77.9 coord: 518..586 e-value: 7.9E-18 score: 66.6 coord: 449..517 e-value: 2.9E-13 score: 51.7
IPR011990	Tetratricopeptide-like helical domain superfamily	GENE3D	G3DSA:1.25.40.10		coord: 28..163 e-value: 1.6E-17 score: 66.0 coord: 254..373 e-value: 8.5E-42 score: 145.7
IPR011990	Tetratricopeptide-like helical domain superfamily	GENE3D	G3DSA:1.25.40.10		coord: 588..686 e-value: 1.9E-17 score: 65.1
IPR002885	Pentatricopeptide repeat	PFAM	PF01535	PPR	coord: 69..95 e-value: 0.036 score: 14.2
IPR002885	Pentatricopeptide repeat	TIGRFAM	TIGR00756	TIGR00756	coord: 383..414 e-value: 1.2E-5 score: 23.1 coord: 313..347 e-value: 9.9E-10 score: 36.0 coord: 208..241 e-value: 1.0E-7 score: 29.7 coord: 348..381 e-value: 2.3E-8 score: 31.7 coord: 420..453 e-value: 1.5E-8 score: 32.3 coord: 595..629 e-value: 5.4E-4 score: 18.0 coord: 140..173 e-value: 1.1E-6 score: 26.4 coord: 491..522 e-value: 6.0E-4 score: 17.8 coord: 456..488 e-value: 1.3E-5 score: 23.1 coord: 243..277 e-value: 2.6E-9 score: 34.7 coord: 278..312 e-value: 9.2E-12 score: 42.4 coord: 527..559 e-value: 7.8E-9 score: 33.2 coord: 174..200 e-value: 4.8E-8 score: 30.7
IPR002885	Pentatricopeptide repeat	PFAM	PF13041	PPR_2	coord: 275..324 e-value: 3.9E-19 score: 68.4 coord: 345..394 e-value: 6.5E-16 score: 58.1 coord: 171..219 e-value: 4.4E-16 score: 58.7 coord: 522..568 e-value: 8.7E-14 score: 51.3 coord: 453..500 e-value: 3.7E-12 score: 46.1
IPR002885	Pentatricopeptide repeat	PFAM	PF12854	PPR_1	coord: 588..619 e-value: 1.6E-6 score: 27.6 coord: 133..165 e-value: 3.6E-6 score: 26.5 coord: 236..268 e-value: 3.3E-8 score: 33.0 coord: 415..446 e-value: 2.3E-13 score: 49.5
IPR002885	Pentatricopeptide repeat	PROSITE	PS51375	PPR	coord: 628..662 score: 7.98
IPR002885	Pentatricopeptide repeat	PROSITE	PS51375	PPR	coord: 558..592 score: 10.38
IPR002885	Pentatricopeptide repeat	PROSITE	PS51375	PPR	coord: 311..345 score: 13.077
IPR002885	Pentatricopeptide repeat	PROSITE	PS51375	PPR	coord: 276..310 score: 13.515
IPR002885	Pentatricopeptide repeat	PROSITE	PS51375	PPR	coord: 593..627 score: 11.038
IPR002885	Pentatricopeptide repeat	PROSITE	PS51375	PPR	coord: 241..275 score: 12.693
IPR002885	Pentatricopeptide repeat	PROSITE	PS51375	PPR	coord: 381..415 score: 10.643
IPR002885	Pentatricopeptide repeat	PROSITE	PS51375	PPR	coord: 67..101 score: 7.651
IPR002885	Pentatricopeptide repeat	PROSITE	PS51375	PPR	coord: 172..202 score: 11.17
IPR002885	Pentatricopeptide repeat	PROSITE	PS51375	PPR	coord: 206..240 score: 12.54
IPR002885	Pentatricopeptide repeat	PROSITE	PS51375	PPR	coord: 488..522 score: 10.446
IPR002885	Pentatricopeptide repeat	PROSITE	PS51375	PPR	coord: 453..487 score: 10.928
IPR002885	Pentatricopeptide repeat	PROSITE	PS51375	PPR	coord: 523..557 score: 12.014
IPR002885	Pentatricopeptide repeat	PROSITE	PS51375	PPR	coord: 418..452 score: 11.849
IPR002885	Pentatricopeptide repeat	PROSITE	PS51375	PPR	coord: 346..380 score: 12.649
IPR002885	Pentatricopeptide repeat	PROSITE	PS51375	PPR	coord: 137..171 score: 11.805
None	No IPR available	PANTHER	PTHR44149	FAMILY NOT NAMED	coord: 340..509 coord: 491..675 coord: 203..377 coord: 65..276
None	No IPR available	PANTHER	PTHR44149:SF3	SUBFAMILY NOT NAMED	coord: 340..509 coord: 491..675 coord: 203..377 coord: 65..276
None	No IPR available	SUPERFAMILY	SSF81901	HCP-like	coord: 242..447

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
CsGy1G030330	Cla007352	Watermelon (97103) v1	cgybwmB024
CsGy1G030330	Csa1G629120	Cucumber (Chinese Long) v2	cgybcuB002
CsGy1G030330	MELO3C015109	Melon (DHL92) v3.5.1	cgybmeB038
CsGy1G030330	ClCG03G012530	Watermelon (Charleston Gray)	cgybwcgB043
CsGy1G030330	CSPI01G31110	Wild cucumber (PI 183967)	cgybcpiB002
CsGy1G030330	CmaCh10G008850	Cucurbita maxima (Rimu)	cgybcmaB013
CsGy1G030330	CmoCh10G009240	Cucurbita moschata (Rifu)	cgybcmoB013
CsGy1G030330	Lsi06G005850	Bottle gourd (USVL1VR-Ls)	cgyblsiB055
CsGy1G030330	Cp4.1LG18g02040	Cucurbita pepo (Zucchini)	cgybcpeB039
CsGy1G030330	MELO3C015109.2	Melon (DHL92) v3.6.1	cgybmedB032
CsGy1G030330	CsaV3_1G043500	Cucumber (Chinese Long) v3	cgybcucB001
CsGy1G030330	Cla97C03G062830	Watermelon (97103) v2	cgybwmbB041
CsGy1G030330	Bhi02G001237	Wax gourd	cgybwgoB094
CsGy1G030330	Carg17854	Silver-seed gourd	carcgybB0955

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:


Gene	Organism	Block
CsGy1G030330	Silver-seed gourd	carcgybB0878
CsGy1G030330	Silver-seed gourd	carcgybB0905
CsGy1G030330	Cucurbita maxima (Rimu)	cgybcmaB027
CsGy1G030330	Cucurbita maxima (Rimu)	cgybcmaB120
CsGy1G030330	Cucurbita moschata (Rifu)	cgybcmoB027
CsGy1G030330	Cucurbita moschata (Rifu)	cgybcmoB110
CsGy1G030330	Cucurbita pepo (Zucchini)	cgybcpeB125
CsGy1G030330	Cucurbita pepo (Zucchini)	cgybcpeB137