CsGy1G030180 (gene) Cucumber (Gy14) v2
The following sequences are available for this feature:
Legend: CDS Hold the cursor over a type above to highlight its positions in the sequence below.ATGGGCAATGCAGTCTCTCCATGTCTTCTCTCTATTTCCATCTCTCGCTGCCACCGTCGTCCCTCCACCGTGAAGCTCGTCTTCACCAATGGCCCCACTAAATTCCTCGCCGGGGACCACCACTTCGCCGGTGAGATCATGTTCCAATTTCCTGACATGATGGTCTGCCATGCTGAATCCTTCTTCATCGGTCACCCGATCCCATCTCTATCCATCGACGACCAGCTTATTGCTGGCGAAACTTACTTGATTCTCCCCATCGACCGGTTCGCCTCCGTCGACGTTCTCTCTACCTCGTCCCTCGCCACGATTGGTGCAGGTAACATGTCGGTGGAGAAATTCTCCGGTCCGTGTCCGTTCGAGTACGTACGAGGCACAAATGGTAAAGTTTTGATTAAGGTGATGCCGGAGTTTATTGTTAGGTTGATATCTCAGGCAGCCATGGACGGTGGAGAAAGCGAAGGAGGAGGTGGTGGGTTTCTTTGTAGTACGCCGGAGTTGAAGAAACATTACGATCAACTTGTTGGATCAACGAAAGGGCAAGTTTGGTCGCCGAAATTGGAGACTATTTCGGAGTATAAAATTAGGTATTCGCCTTGTAGATTTGTAGGGTTTAAACTTAAACAAAAAGAAGGCTAA ATGGGCAATGCAGTCTCTCCATGTCTTCTCTCTATTTCCATCTCTCGCTGCCACCGTCGTCCCTCCACCGTGAAGCTCGTCTTCACCAATGGCCCCACTAAATTCCTCGCCGGGGACCACCACTTCGCCGGTGAGATCATGTTCCAATTTCCTGACATGATGGTCTGCCATGCTGAATCCTTCTTCATCGGTCACCCGATCCCATCTCTATCCATCGACGACCAGCTTATTGCTGGCGAAACTTACTTGATTCTCCCCATCGACCGGTTCGCCTCCGTCGACGTTCTCTCTACCTCGTCCCTCGCCACGATTGGTGCAGGTAACATGTCGGTGGAGAAATTCTCCGGTCCGTGTCCGTTCGAGTACGTACGAGGCACAAATGGTAAAGTTTTGATTAAGGTGATGCCGGAGTTTATTGTTAGGTTGATATCTCAGGCAGCCATGGACGGTGGAGAAAGCGAAGGAGGAGGTGGTGGGTTTCTTTGTAGTACGCCGGAGTTGAAGAAACATTACGATCAACTTGTTGGATCAACGAAAGGGCAAGTTTGGTCGCCGAAATTGGAGACTATTTCGGAGTATAAAATTAGGTATTCGCCTTGTAGATTTGTAGGGTTTAAACTTAAACAAAAAGAAGGCTAA ATGGGCAATGCAGTCTCTCCATGTCTTCTCTCTATTTCCATCTCTCGCTGCCACCGTCGTCCCTCCACCGTGAAGCTCGTCTTCACCAATGGCCCCACTAAATTCCTCGCCGGGGACCACCACTTCGCCGGTGAGATCATGTTCCAATTTCCTGACATGATGGTCTGCCATGCTGAATCCTTCTTCATCGGTCACCCGATCCCATCTCTATCCATCGACGACCAGCTTATTGCTGGCGAAACTTACTTGATTCTCCCCATCGACCGGTTCGCCTCCGTCGACGTTCTCTCTACCTCGTCCCTCGCCACGATTGGTGCAGGTAACATGTCGGTGGAGAAATTCTCCGGTCCGTGTCCGTTCGAGTACGTACGAGGCACAAATGGTAAAGTTTTGATTAAGGTGATGCCGGAGTTTATTGTTAGGTTGATATCTCAGGCAGCCATGGACGGTGGAGAAAGCGAAGGAGGAGGTGGTGGGTTTCTTTGTAGTACGCCGGAGTTGAAGAAACATTACGATCAACTTGTTGGATCAACGAAAGGGCAAGTTTGGTCGCCGAAATTGGAGACTATTTCGGAGTATAAAATTAGGTATTCGCCTTGTAGATTTGTAGGGTTTAAACTTAAACAAAAAGAAGGCTAA MGNAVSPCLLSISISRCHRRPSTVKLVFTNGPTKFLAGDHHFAGEIMFQFPDMMVCHAESFFIGHPIPSLSIDDQLIAGETYLILPIDRFASVDVLSTSSLATIGAGNMSVEKFSGPCPFEYVRGTNGKVLIKVMPEFIVRLISQAAMDGGESEGGGGGFLCSTPELKKHYDQLVGSTKGQVWSPKLETISEYKIRYSPCRFVGFKLKQKEG
BLAST of CsGy1G030180 vs. NCBI nr
Match: XP_004139126.1 (PREDICTED: uncharacterized protein LOC101216872 [Cucumis sativus] >KGN66539.1 hypothetical protein Csa_1G627480 [Cucumis sativus]) HSP 1 Score: 438.3 bits (1126), Expect = 1.4e-119 Identity = 212/212 (100.00%), Postives = 212/212 (100.00%), Query Frame = 0
BLAST of CsGy1G030180 vs. NCBI nr
Match: XP_008450347.1 (PREDICTED: uncharacterized protein LOC103491983 [Cucumis melo]) HSP 1 Score: 377.1 bits (967), Expect = 3.9e-101 Identity = 183/212 (86.32%), Postives = 191/212 (90.09%), Query Frame = 0
BLAST of CsGy1G030180 vs. NCBI nr
Match: XP_022961145.1 (uncharacterized protein LOC111461744 [Cucurbita moschata]) HSP 1 Score: 337.8 bits (865), Expect = 2.7e-89 Identity = 163/212 (76.89%), Postives = 183/212 (86.32%), Query Frame = 0
BLAST of CsGy1G030180 vs. NCBI nr
Match: XP_023516713.1 (uncharacterized protein LOC111780520 [Cucurbita pepo subsp. pepo]) HSP 1 Score: 336.3 bits (861), Expect = 7.7e-89 Identity = 162/212 (76.42%), Postives = 183/212 (86.32%), Query Frame = 0
BLAST of CsGy1G030180 vs. NCBI nr
Match: XP_022988214.1 (uncharacterized protein LOC111485518 [Cucurbita maxima]) HSP 1 Score: 335.9 bits (860), Expect = 1.0e-88 Identity = 161/212 (75.94%), Postives = 182/212 (85.85%), Query Frame = 0
BLAST of CsGy1G030180 vs. TAIR10
Match: AT5G12340.1 (unknown protein) HSP 1 Score: 179.5 bits (454), Expect = 2.2e-45 Identity = 101/206 (49.03%), Postives = 131/206 (63.59%), Query Frame = 0
BLAST of CsGy1G030180 vs. TAIR10
Match: AT1G28190.1 (unknown protein) HSP 1 Score: 70.9 bits (172), Expect = 1.1e-12 Identity = 52/160 (32.50%), Postives = 78/160 (48.75%), Query Frame = 0
BLAST of CsGy1G030180 vs. TrEMBL
Match: tr|A0A0A0LZV5|A0A0A0LZV5_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_1G627480 PE=4 SV=1) HSP 1 Score: 438.3 bits (1126), Expect = 9.5e-120 Identity = 212/212 (100.00%), Postives = 212/212 (100.00%), Query Frame = 0
BLAST of CsGy1G030180 vs. TrEMBL
Match: tr|A0A1S3BP11|A0A1S3BP11_CUCME (uncharacterized protein LOC103491983 OS=Cucumis melo OX=3656 GN=LOC103491983 PE=4 SV=1) HSP 1 Score: 377.1 bits (967), Expect = 2.6e-101 Identity = 183/212 (86.32%), Postives = 191/212 (90.09%), Query Frame = 0
BLAST of CsGy1G030180 vs. TrEMBL
Match: tr|A0A1U8P8V9|A0A1U8P8V9_GOSHI (uncharacterized protein LOC107956515 OS=Gossypium hirsutum OX=3635 GN=LOC107956515 PE=4 SV=1) HSP 1 Score: 253.1 bits (645), Expect = 5.7e-64 Identity = 128/212 (60.38%), Postives = 152/212 (71.70%), Query Frame = 0
BLAST of CsGy1G030180 vs. TrEMBL
Match: tr|A0A2P5R4C4|A0A2P5R4C4_GOSBA (Uncharacterized protein OS=Gossypium barbadense OX=3634 GN=GOBAR_AA08237 PE=4 SV=1) HSP 1 Score: 253.1 bits (645), Expect = 5.7e-64 Identity = 128/212 (60.38%), Postives = 152/212 (71.70%), Query Frame = 0
BLAST of CsGy1G030180 vs. TrEMBL
Match: tr|A0A0D2N954|A0A0D2N954_GOSRA (Uncharacterized protein OS=Gossypium raimondii OX=29730 GN=B456_001G134300 PE=4 SV=1) HSP 1 Score: 253.1 bits (645), Expect = 5.7e-64 Identity = 128/212 (60.38%), Postives = 152/212 (71.70%), Query Frame = 0
The following BLAST results are available for this feature:
The following terms have been associated with this gene:
GO Assignments
This gene is annotated with the following GO terms.
The following mRNA feature(s) are a part of this gene:
Analysis Name: InterPro Annotations of cucumber Gy14 genome (v2)
Date Performed: 2018-09-25
The following gene(s) are orthologous to this gene: The following gene(s) are paralogous to this gene: None The following block(s) are covering this gene:
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