Cp4.1LG18g01870 (gene) Cucurbita pepo (Zucchini) | Cucurbit Genomics Database (CuGenDB)

Overview


Name	Cp4.1LG18g01870
Type	gene
Organism	Cucurbita pepo (Cucurbita pepo (Zucchini))
Description	DUF4228 domain protein
Location	Cp4.1LG18 : 3575468 .. 3576091 (+)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGGGAATGCAATGTCTCCATGTCTTATACCCCCTTCCATTACCAAACGCCACCGCTCCTCCGCCGTGAAGCTCATATTCTCCAGCGGGCCCACCAGAATCCTCGCCGGAAGCCACCACTTCGCCGGAGAGATCATGTTCCAATTTCCCGACATGATAGTCTGCCACGCTGACTCCTTCTTCATCGGCCACCGAATTCCATCCTTAGCCATTGAAGACAAGCTTCTCGCCGGCGAAACCTACTTGGTTCTCCCCATAGACCGATTCTCCTTGAACGATGTTCTCTCAACGTCGTCGCTCGCTGCCATCGGCGCCGGGAATGAGGCGGCGGAGAAATTCTCGAGTTCGTGTCCGTTTGAGTACGTCCGAGGGCGGAATGGGAAAGCGCTGATTAAGGTCATGCCGGAGTTTATTGTTCGGTTGGTTTCTCCTGGCGGCGCGTACGGCGGAGAGGGTGGTGGGTTTTTGTGTAGCACGCCGGAGTTGAAGAAGCATTACGATCAACTCGTCGGAACATCGAAGGGGCAGGTTTGGTCGCCGTCGTTGGAGACTATTTCGGAGTATAAAATTAGGTATTCGCCCTGTAGATTTGTTGGGATTAAAGTTAAACAAAAGGAAGGCTAA

mRNA sequence

ATGGGGAATGCAATGTCTCCATGTCTTATACCCCCTTCCATTACCAAACGCCACCGCTCCTCCGCCGTGAAGCTCATATTCTCCAGCGGGCCCACCAGAATCCTCGCCGGAAGCCACCACTTCGCCGGAGAGATCATGTTCCAATTTCCCGACATGATAGTCTGCCACGCTGACTCCTTCTTCATCGGCCACCGAATTCCATCCTTAGCCATTGAAGACAAGCTTCTCGCCGGCGAAACCTACTTGGTTCTCCCCATAGACCGATTCTCCTTGAACGATGTTCTCTCAACGTCGTCGCTCGCTGCCATCGGCGCCGGGAATGAGGCGGCGGAGAAATTCTCGAGTTCGTGTCCGTTTGAGTACGTCCGAGGGCGGAATGGGAAAGCGCTGATTAAGGTCATGCCGGAGTTTATTGTTCGGTTGGTTTCTCCTGGCGGCGCGTACGGCGGAGAGGGTGGTGGGTTTTTGTGTAGCACGCCGGAGTTGAAGAAGCATTACGATCAACTCGTCGGAACATCGAAGGGGCAGGTTTGGTCGCCGTCGTTGGAGACTATTTCGGAGTATAAAATTAGGTATTCGCCCTGTAGATTTGTTGGGATTAAAGTTAAACAAAAGGAAGGCTAA

Coding sequence (CDS)

ATGGGGAATGCAATGTCTCCATGTCTTATACCCCCTTCCATTACCAAACGCCACCGCTCCTCCGCCGTGAAGCTCATATTCTCCAGCGGGCCCACCAGAATCCTCGCCGGAAGCCACCACTTCGCCGGAGAGATCATGTTCCAATTTCCCGACATGATAGTCTGCCACGCTGACTCCTTCTTCATCGGCCACCGAATTCCATCCTTAGCCATTGAAGACAAGCTTCTCGCCGGCGAAACCTACTTGGTTCTCCCCATAGACCGATTCTCCTTGAACGATGTTCTCTCAACGTCGTCGCTCGCTGCCATCGGCGCCGGGAATGAGGCGGCGGAGAAATTCTCGAGTTCGTGTCCGTTTGAGTACGTCCGAGGGCGGAATGGGAAAGCGCTGATTAAGGTCATGCCGGAGTTTATTGTTCGGTTGGTTTCTCCTGGCGGCGCGTACGGCGGAGAGGGTGGTGGGTTTTTGTGTAGCACGCCGGAGTTGAAGAAGCATTACGATCAACTCGTCGGAACATCGAAGGGGCAGGTTTGGTCGCCGTCGTTGGAGACTATTTCGGAGTATAAAATTAGGTATTCGCCCTGTAGATTTGTTGGGATTAAAGTTAAACAAAAGGAAGGCTAA

Protein sequence

MGNAMSPCLIPPSITKRHRSSAVKLIFSSGPTRILAGSHHFAGEIMFQFPDMIVCHADSFFIGHRIPSLAIEDKLLAGETYLVLPIDRFSLNDVLSTSSLAAIGAGNEAAEKFSSSCPFEYVRGRNGKALIKVMPEFIVRLVSPGGAYGGEGGGFLCSTPELKKHYDQLVGTSKGQVWSPSLETISEYKIRYSPCRFVGIKVKQKEG

Homology

[Close]

BLAST of Cp4.1LG18g01870 vs. TrEMBL
Match: A0A0A0LZV5_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_1G627480 PE=4 SV=1)

HSP 1 Score: 334.7 bits (857), Expect = 7.9e-89
Identity = 162/212 (76.42%), Postives = 183/212 (86.32%), Query Frame = 1


Query: 1   MGNAMSPCLIPPSITKRHRS-SAVKLIFSSGPTRILAGSHHFAGEIMFQFPDMIVCHADS 60
           MGNA+SPCL+  SI++ HR  S VKL+F++GPT+ LAG HHFAGEIMFQFPDM+VCHA+S
Sbjct: 1   MGNAVSPCLLSISISRCHRRPSTVKLVFTNGPTKFLAGDHHFAGEIMFQFPDMMVCHAES 60

Query: 61  FFIGHRIPSLAIEDKLLAGETYLVLPIDRFSLNDVLSTSSLAAIGAGNEAAEKFSSSCPF 120
           FFIGH IPSL+I+D+L+AGETYL+LPIDRF+  DVLSTSSLA IGAGN + EKFS  CPF
Sbjct: 61  FFIGHPIPSLSIDDQLIAGETYLILPIDRFASVDVLSTSSLATIGAGNMSVEKFSGPCPF 120

Query: 121 EYVRGRNGKALIKVMPEFIVRLVSPGGAYGGE----GGGFLCSTPELKKHYDQLVGTSKG 180
           EYVRG NGK LIKVMPEFIVRL+S     GGE    GGGFLCSTPELKKHYDQLVG++KG
Sbjct: 121 EYVRGTNGKVLIKVMPEFIVRLISQAAMDGGESEGGGGGFLCSTPELKKHYDQLVGSTKG 180

Query: 181 QVWSPSLETISEYKIRYSPCRFVGIKVKQKEG 208
           QVWSP LETISEYKIRYSPCRFVG K+KQKEG
Sbjct: 181 QVWSPKLETISEYKIRYSPCRFVGFKLKQKEG 212

[Close]

BLAST of Cp4.1LG18g01870 vs. TrEMBL
Match: A0A061GTT2_THECC (Uncharacterized protein OS=Theobroma cacao GN=TCM_040942 PE=4 SV=1)

HSP 1 Score: 245.7 bits (626), Expect = 4.8e-62
Identity = 127/208 (61.06%), Postives = 153/208 (73.56%), Query Frame = 1


Query: 1   MGNAMSPCLIPPSITKRHRSSAVKLIFSSGPTRILAGSHHFAGEIMFQFPDMIVCHADSF 60
           MGN++SPC  P S       S VKLIF  G TRIL G H  AGE+MF+FPD +VCHADSF
Sbjct: 1   MGNSISPCFHPNS------RSLVKLIFWEGNTRILTGKH-IAGEVMFEFPDRMVCHADSF 60

Query: 61  FIGHRIPSLAIEDKLLAGETYLVLPIDRFSLNDVLSTSSLAAIGAGNEAAEKFSSSCPFE 120
           FIGH IP+L I+D+L+ G+TY VLP+DRF+ N VLS SSLAA+ +  + +      CPFE
Sbjct: 61  FIGHPIPALGIDDELMPGQTYFVLPLDRFACN-VLSASSLAALNSSPKPSPINFGDCPFE 120

Query: 121 YVRGRNGKALIKVMPEFIVRLV--SPGGAYGGEGGGFLCSTPELKKHYDQLVGTSKGQVW 180
           Y++G NG+ LIKV+PEFI RL+  S     G  G  FLCSTPELKKHY+ LVG SK QVW
Sbjct: 121 YIKGSNGRVLIKVVPEFITRLINRSREEEIGSPGNSFLCSTPELKKHYEMLVG-SKEQVW 180

Query: 181 SPSLETISEYKIRYSPCRFVGIKVKQKE 207
           SP LETISEYKIR+SPCRF+G++ KQKE
Sbjct: 181 SPKLETISEYKIRFSPCRFIGLEWKQKE 199

[Close]

BLAST of Cp4.1LG18g01870 vs. TrEMBL
Match: A0A0D2N954_GOSRA (Uncharacterized protein OS=Gossypium raimondii GN=B456_001G134300 PE=4 SV=1)

HSP 1 Score: 245.0 bits (624), Expect = 8.2e-62
Identity = 126/206 (61.17%), Postives = 149/206 (72.33%), Query Frame = 1


Query: 1   MGNAMSPCLIPPSITKRHRSSAVKLIFSSGPTRILAGSHHFAGEIMFQFPDMIVCHADSF 60
           MGN++SPC  P      +  S+VKLIF  G TRIL G H  AGE+MF+FPD +VCHADSF
Sbjct: 1   MGNSISPCFHP------NPRSSVKLIFWEGNTRILTGKH-IAGEVMFEFPDKMVCHADSF 60

Query: 61  FIGHRIPSLAIEDKLLAGETYLVLPIDRFSLNDVLSTSSLAAIGAGNEAAEKFSSSCPFE 120
           FIGH IP L I+D L+ G+TY VLP+DRF   +VLS SSLAA+ +  + A      CPFE
Sbjct: 61  FIGHPIPVLGIDDDLMPGQTYFVLPLDRFPCMNVLSASSLAALKSSPKPAPINFGDCPFE 120

Query: 121 YVRGRNGKALIKVMPEFIVRLVSPGGAYGGEGGGFLCSTPELKKHYDQLVGTSKGQVWSP 180
           YV+G NG+ LIKV+PEFI  L+  G    G    FLCSTPELKKHYD LVG SK QVWSP
Sbjct: 121 YVKGSNGRVLIKVLPEFITSLIH-GSKEEGSENSFLCSTPELKKHYDMLVG-SKEQVWSP 180

Query: 181 SLETISEYKIRYSPCRFVGIKVKQKE 207
            LETISEYKIR+SPCRF+G++ KQKE
Sbjct: 181 KLETISEYKIRFSPCRFIGLEWKQKE 197

[Close]

BLAST of Cp4.1LG18g01870 vs. TrEMBL
Match: D7T157_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VIT_06s0009g03470 PE=4 SV=1)

HSP 1 Score: 239.6 bits (610), Expect = 3.4e-60
Identity = 121/208 (58.17%), Postives = 153/208 (73.56%), Query Frame = 1


Query: 1   MGNAMSPCLIPPSITKRHRSSAVKLIFSSGPTRILAGSHHFAGEIMFQFPDMIVCHADSF 60
           MGNA+SPC       K+   S+VKL+F  G TRIL G H  AGEIMF+FPD +VCHADSF
Sbjct: 1   MGNAVSPCF------KQSSKSSVKLVFWEGTTRILTGKH-LAGEIMFEFPDRMVCHADSF 60

Query: 61  FIGHRIPSLAIEDKLLAGETYLVLPIDRFSLNDVLSTSSLAAIGAGNEAAEKFSSSCPFE 120
           FIG  +P+LAI+D+L+  +TY VLPID F+ N VLS SSL+A  +  + +    S CP E
Sbjct: 61  FIGRVVPALAIDDELIPAQTYFVLPIDLFACN-VLSASSLSAFTSSPKPSPIKFSECPLE 120

Query: 121 YVRGRNGKALIKVMPEFIVRLVSPGGAYG--GEGGGFLCSTPELKKHYDQLVGTSKGQVW 180
           Y++G NG+ +IKVMPEFI +L++ G   G       FLCSTPEL+KHY+QLVG SKGQVW
Sbjct: 121 YIKGSNGRVMIKVMPEFITKLITTGKEDGCSSPNNSFLCSTPELQKHYEQLVG-SKGQVW 180

Query: 181 SPSLETISEYKIRYSPCRFVGIKVKQKE 207
           SP LETISEYK+RYSPCRF+G++ ++KE
Sbjct: 181 SPKLETISEYKLRYSPCRFIGLEWREKE 199

[Close]

BLAST of Cp4.1LG18g01870 vs. TrEMBL
Match: B9GG89_POPTR (Uncharacterized protein OS=Populus trichocarpa GN=POPTR_0001s28310g PE=4 SV=1)

HSP 1 Score: 239.6 bits (610), Expect = 3.4e-60
Identity = 127/212 (59.91%), Postives = 153/212 (72.17%), Query Frame = 1


Query: 1   MGNAMSPCLIPPSITKRHRSSAVKLIFSSGPTRILAGSH-HFAGEIMFQFPDMIVCHADS 60
           MGNA+SPC    S     R+S VKLIF  G TRIL GS  H AGEIMF+ PDM+VCHADS
Sbjct: 1   MGNAVSPCFHQSS-----RASFVKLIFWEGTTRILTGSSKHIAGEIMFENPDMMVCHADS 60

Query: 61  FFIGHRIPSLAIEDKLLAGETYLVLPIDRFSLNDVLSTSSLAAIGAGNEAAEKFSSSCPF 120
           FFIG  +PSLAI+D+L+ G+TY VLP+DRF+ N VLS SSLAA  +  +         PF
Sbjct: 61  FFIGQPVPSLAIDDELMPGQTYFVLPLDRFAFN-VLSASSLAAFSSSPKRTPINFGESPF 120

Query: 121 EYVRGRNGKALIKVMPEFIVRLVSPGG-----AYGGEGGGFLCSTPELKKHYDQLVGTSK 180
           +Y++G +G+ LIKV+PEFI RLV+ GG        G    FLCSTPELKKHY+QLVG SK
Sbjct: 121 QYLKGADGRVLIKVVPEFIARLVNKGGDQDQTGSTGPTNSFLCSTPELKKHYEQLVG-SK 180

Query: 181 GQVWSPSLETISEYKIRYSPCRFVGIKVKQKE 207
            Q WSP L+TISEYK+RYSPCRF+G++ KQKE
Sbjct: 181 EQTWSPKLDTISEYKLRYSPCRFIGLEWKQKE 205

[Close]

BLAST of Cp4.1LG18g01870 vs. TAIR10
Match: AT5G12340.1 (AT5G12340.1 unknown protein)

HSP 1 Score: 175.3 bits (443), Expect = 4.0e-44
Identity = 102/223 (45.74%), Postives = 133/223 (59.64%), Query Frame = 1


Query: 1   MGNAMSPCLIPPSITKRHRSSAVKLIFSSGPTRILAG-SHHFAGEIMFQFPDMIVCHADS 60
           MG ++     P  I +R +     + F    T+ L G   H AGEIMF+FPD IVCHADS
Sbjct: 1   MGRSLINSCFP--IIRRRQGIVTLVFFEHVSTKTLCGFKKHVAGEIMFEFPDQIVCHADS 60

Query: 61  FFIGHRIPSLAIEDKLLAGETYLVLPIDRFSLNDVLSTSSLAAIGAGNEAAEKF------ 120
           F+IG +IP+LA++D L+ G+TY VLPI+RF    +L+TS L+   +  E           
Sbjct: 61  FYIGRQIPALAMDDYLIPGQTYFVLPIERFQYK-ILTTSCLSIFNSNLENVRSNTPPLNF 120

Query: 121 ---SSSCPFEYVRGRNGKALIKVMPEFIVRLVSPG-------GAYGGEGGGFLCSTPELK 180
              SS  PFEY +G NGK LIKV PEFI+ L+              GE    +C++PELK
Sbjct: 121 TAPSSPPPFEYSQGPNGKILIKVSPEFIISLICKNRNIREEEATSCGENSA-ICNSPELK 180

Query: 181 KHYDQLVGTSKGQVWSPSLETISEYKIRYSPCRFVGIKVKQKE 207
           K YDQLVGT +  +WSP+L+TISE+KIR SP RF G+  KQ E
Sbjct: 181 KQYDQLVGT-REHMWSPNLQTISEHKIRVSPLRFFGLNRKQDE 218

[Close]

BLAST of Cp4.1LG18g01870 vs. TAIR10
Match: AT1G28190.1 (AT1G28190.1 unknown protein)

HSP 1 Score: 78.2 bits (191), Expect = 6.7e-15
Identity = 61/193 (31.61%), Postives = 89/193 (46.11%), Query Frame = 1


Query: 12  PSITKRHRSSAVKLIFSSGPTRILAGSHHFAGEIMFQFPDMIVCHADSFFIGHRIPSLAI 71
           P   +      +KL+ S G  ++         E+   FP   +C +D  +IG + P L+ 
Sbjct: 28  PRPDRTSNGGRIKLVRSDGSLQVY-DRPVVVSELTKDFPKHKICRSDLLYIGQKTPVLSE 87

Query: 72  EDKLLAGETYLVLPIDRFSLNDV--LSTSSLAAIGAGNEAAEKFSSSC-PFEYVRGRNGK 131
            + L  G  Y +LP D F  ND+  L+ ++L     G    +K      PF   +G  G+
Sbjct: 88  TETLKLGLNYFLLPSDFFK-NDLSFLTIATLKTPQNGGVLVKKTQQQPQPFLIQKGEKGE 147

Query: 132 AL-IKVMPEFIVRLVSPGGAY-----------GGEGGGFLCSTPELKKHYDQLVGTSKGQ 190
            L I+V  EF+  L+  G              GGEG G +C+T +LKK Y QLVG  +  
Sbjct: 148 RLRIRVSEEFVSELMMEGKKNRVNEEEEEEEGGGEGEGRVCTTVKLKKDYVQLVGLRR-- 207

[Close]

BLAST of Cp4.1LG18g01870 vs. NCBI nr
Match: gi|659098910|ref|XP_008450347.1| (PREDICTED: uncharacterized protein LOC103491983 [Cucumis melo])

HSP 1 Score: 343.6 bits (880), Expect = 2.4e-91
Identity = 167/212 (78.77%), Postives = 186/212 (87.74%), Query Frame = 1


Query: 1   MGNAMSPCLIPPSIT-KRHRSSAVKLIFSSGPTRILAGSHHFAGEIMFQFPDMIVCHADS 60
           MGNA+SPCLI  SI+ +RHR SAVKL+F+ GPT+ L G+HHFAGEIMFQFPDM+VCHA+S
Sbjct: 1   MGNAVSPCLISISISLRRHRPSAVKLVFTDGPTKFLVGNHHFAGEIMFQFPDMMVCHAES 60

Query: 61  FFIGHRIPSLAIEDKLLAGETYLVLPIDRFSLNDVLSTSSLAAIGAGNEAAEKFSSSCPF 120
           FFIGH IPSL+I+D+LL GETYLVLPIDRF+  DVLSTSSLA IGAGN +AEKFS  CPF
Sbjct: 61  FFIGHPIPSLSIDDELLVGETYLVLPIDRFASVDVLSTSSLAMIGAGNMSAEKFSGPCPF 120

Query: 121 EYVRGRNGKALIKVMPEFIVRLVSP----GGAYGGEGGGFLCSTPELKKHYDQLVGTSKG 180
           EYVRG NG+ LIKVMPEFIVRL+SP    GG  GG GGGFLCSTPELKKHYDQLVG++KG
Sbjct: 121 EYVRGTNGRVLIKVMPEFIVRLISPAAVDGGESGGGGGGFLCSTPELKKHYDQLVGSTKG 180

Query: 181 QVWSPSLETISEYKIRYSPCRFVGIKVKQKEG 208
           QVWSP LETISEYKIRYSPCRFVG K+KQKEG
Sbjct: 181 QVWSPKLETISEYKIRYSPCRFVGFKLKQKEG 212

[Close]

BLAST of Cp4.1LG18g01870 vs. NCBI nr
Match: gi|449442715|ref|XP_004139126.1| (PREDICTED: uncharacterized protein LOC101216872 [Cucumis sativus])

HSP 1 Score: 334.7 bits (857), Expect = 1.1e-88
Identity = 162/212 (76.42%), Postives = 183/212 (86.32%), Query Frame = 1


Query: 1   MGNAMSPCLIPPSITKRHRS-SAVKLIFSSGPTRILAGSHHFAGEIMFQFPDMIVCHADS 60
           MGNA+SPCL+  SI++ HR  S VKL+F++GPT+ LAG HHFAGEIMFQFPDM+VCHA+S
Sbjct: 1   MGNAVSPCLLSISISRCHRRPSTVKLVFTNGPTKFLAGDHHFAGEIMFQFPDMMVCHAES 60

Query: 61  FFIGHRIPSLAIEDKLLAGETYLVLPIDRFSLNDVLSTSSLAAIGAGNEAAEKFSSSCPF 120
           FFIGH IPSL+I+D+L+AGETYL+LPIDRF+  DVLSTSSLA IGAGN + EKFS  CPF
Sbjct: 61  FFIGHPIPSLSIDDQLIAGETYLILPIDRFASVDVLSTSSLATIGAGNMSVEKFSGPCPF 120

Query: 121 EYVRGRNGKALIKVMPEFIVRLVSPGGAYGGE----GGGFLCSTPELKKHYDQLVGTSKG 180
           EYVRG NGK LIKVMPEFIVRL+S     GGE    GGGFLCSTPELKKHYDQLVG++KG
Sbjct: 121 EYVRGTNGKVLIKVMPEFIVRLISQAAMDGGESEGGGGGFLCSTPELKKHYDQLVGSTKG 180

Query: 181 QVWSPSLETISEYKIRYSPCRFVGIKVKQKEG 208
           QVWSP LETISEYKIRYSPCRFVG K+KQKEG
Sbjct: 181 QVWSPKLETISEYKIRYSPCRFVGFKLKQKEG 212

[Close]

BLAST of Cp4.1LG18g01870 vs. NCBI nr
Match: gi|590584873|ref|XP_007015297.1| (Uncharacterized protein TCM_040942 [Theobroma cacao])

HSP 1 Score: 245.7 bits (626), Expect = 6.9e-62
Identity = 127/208 (61.06%), Postives = 153/208 (73.56%), Query Frame = 1


Query: 1   MGNAMSPCLIPPSITKRHRSSAVKLIFSSGPTRILAGSHHFAGEIMFQFPDMIVCHADSF 60
           MGN++SPC  P S       S VKLIF  G TRIL G H  AGE+MF+FPD +VCHADSF
Sbjct: 1   MGNSISPCFHPNS------RSLVKLIFWEGNTRILTGKH-IAGEVMFEFPDRMVCHADSF 60

Query: 61  FIGHRIPSLAIEDKLLAGETYLVLPIDRFSLNDVLSTSSLAAIGAGNEAAEKFSSSCPFE 120
           FIGH IP+L I+D+L+ G+TY VLP+DRF+ N VLS SSLAA+ +  + +      CPFE
Sbjct: 61  FIGHPIPALGIDDELMPGQTYFVLPLDRFACN-VLSASSLAALNSSPKPSPINFGDCPFE 120

Query: 121 YVRGRNGKALIKVMPEFIVRLV--SPGGAYGGEGGGFLCSTPELKKHYDQLVGTSKGQVW 180
           Y++G NG+ LIKV+PEFI RL+  S     G  G  FLCSTPELKKHY+ LVG SK QVW
Sbjct: 121 YIKGSNGRVLIKVVPEFITRLINRSREEEIGSPGNSFLCSTPELKKHYEMLVG-SKEQVW 180

Query: 181 SPSLETISEYKIRYSPCRFVGIKVKQKE 207
           SP LETISEYKIR+SPCRF+G++ KQKE
Sbjct: 181 SPKLETISEYKIRFSPCRFIGLEWKQKE 199

[Close]

BLAST of Cp4.1LG18g01870 vs. NCBI nr
Match: gi|823129352|ref|XP_012447741.1| (PREDICTED: uncharacterized protein LOC105770917 [Gossypium raimondii])

HSP 1 Score: 245.0 bits (624), Expect = 1.2e-61
Identity = 126/206 (61.17%), Postives = 149/206 (72.33%), Query Frame = 1


Query: 1   MGNAMSPCLIPPSITKRHRSSAVKLIFSSGPTRILAGSHHFAGEIMFQFPDMIVCHADSF 60
           MGN++SPC  P      +  S+VKLIF  G TRIL G H  AGE+MF+FPD +VCHADSF
Sbjct: 1   MGNSISPCFHP------NPRSSVKLIFWEGNTRILTGKH-IAGEVMFEFPDKMVCHADSF 60

Query: 61  FIGHRIPSLAIEDKLLAGETYLVLPIDRFSLNDVLSTSSLAAIGAGNEAAEKFSSSCPFE 120
           FIGH IP L I+D L+ G+TY VLP+DRF   +VLS SSLAA+ +  + A      CPFE
Sbjct: 61  FIGHPIPVLGIDDDLMPGQTYFVLPLDRFPCMNVLSASSLAALKSSPKPAPINFGDCPFE 120

Query: 121 YVRGRNGKALIKVMPEFIVRLVSPGGAYGGEGGGFLCSTPELKKHYDQLVGTSKGQVWSP 180
           YV+G NG+ LIKV+PEFI  L+  G    G    FLCSTPELKKHYD LVG SK QVWSP
Sbjct: 121 YVKGSNGRVLIKVLPEFITSLIH-GSKEEGSENSFLCSTPELKKHYDMLVG-SKEQVWSP 180

Query: 181 SLETISEYKIRYSPCRFVGIKVKQKE 207
            LETISEYKIR+SPCRF+G++ KQKE
Sbjct: 181 KLETISEYKIRFSPCRFIGLEWKQKE 197

[Close]

BLAST of Cp4.1LG18g01870 vs. NCBI nr
Match: gi|1009171508|ref|XP_015866775.1| (PREDICTED: uncharacterized protein LOC107404338 [Ziziphus jujuba])

HSP 1 Score: 245.0 bits (624), Expect = 1.2e-61
Identity = 128/217 (58.99%), Postives = 157/217 (72.35%), Query Frame = 1


Query: 1   MGNAMSPCLIPPSITKRHRSSAVKLIFSSGPTRILAGSHHFAGEIMFQFPDMIVCHADSF 60
           MGNA+SPC       ++  +SAVKLIF  G TRIL G  H AGEIMF+FPD +VCHADSF
Sbjct: 1   MGNAVSPCF------QQSSNSAVKLIFWEGNTRILRGGRHLAGEIMFEFPDQMVCHADSF 60

Query: 61  FIGHRIPSLAIEDKLLAGETYLVLPIDRFSLNDVLSTSSLAAIGAG--NEAAEKFSSSCP 120
           FIGH IP+LAI+D+L  G+TY VLPIDRF+   VLS SSL+A+ +   N  A     +CP
Sbjct: 61  FIGHPIPALAIDDELARGQTYFVLPIDRFACR-VLSASSLSALSSSSPNNKAPINFGNCP 120

Query: 121 FEYVRGRNGKALIKVMPEFIVRLVSPGGAYGGEGGG---------FLCSTPELKKHYDQL 180
           FEY++G NG+ LIKVMPEFI RL++ G     + G          FLCSTPEL+KHY+QL
Sbjct: 121 FEYLKGSNGRVLIKVMPEFITRLITRGNNVNDQIGSNSNSPSNNKFLCSTPELQKHYEQL 180

Query: 181 VGTSKGQVWSPSLETISEYKIRYSPCRFVGIKVKQKE 207
           VG SK Q+WSP LETISE+KIR+SPCRF+G++ KQKE
Sbjct: 181 VG-SKEQLWSPKLETISEHKIRFSPCRFIGLEWKQKE 209

The following BLAST results are available for this feature:

BLAST of Cp4.1LG18g01870 vs. Swiss-Prot


Match Name	E-value	Identity	Description

BLAST of Cp4.1LG18g01870 vs. TrEMBL


Match Name	E-value	Identity	Description
A0A0A0LZV5_CUCSA	7.9e-89	76.42	Uncharacterized protein OS=Cucumis sativus GN=Csa_1G627480 PE=4 SV=1	[more]
A0A061GTT2_THECC	4.8e-62	61.06	Uncharacterized protein OS=Theobroma cacao GN=TCM_040942 PE=4 SV=1	[more]
A0A0D2N954_GOSRA	8.2e-62	61.17	Uncharacterized protein OS=Gossypium raimondii GN=B456_001G134300 PE=4 SV=1	[more]
D7T157_VITVI	3.4e-60	58.17	Putative uncharacterized protein OS=Vitis vinifera GN=VIT_06s0009g03470 PE=4 SV=...	[more]
B9GG89_POPTR	3.4e-60	59.91	Uncharacterized protein OS=Populus trichocarpa GN=POPTR_0001s28310g PE=4 SV=1	[more]

BLAST of Cp4.1LG18g01870 vs. TAIR10


Match Name	E-value	Identity	Description
AT5G12340.1	4.0e-44	45.74	unknown protein	[more]
AT1G28190.1	6.7e-15	31.61	unknown protein	[more]

BLAST of Cp4.1LG18g01870 vs. NCBI nr


Match Name	E-value	Identity	Description
gi\|659098910\|ref\|XP_008450347.1\|	2.4e-91	78.77	PREDICTED: uncharacterized protein LOC103491983 [Cucumis melo]	[more]
gi\|449442715\|ref\|XP_004139126.1\|	1.1e-88	76.42	PREDICTED: uncharacterized protein LOC101216872 [Cucumis sativus]	[more]
gi\|590584873\|ref\|XP_007015297.1\|	6.9e-62	61.06	Uncharacterized protein TCM_040942 [Theobroma cacao]	[more]
gi\|823129352\|ref\|XP_012447741.1\|	1.2e-61	61.17	PREDICTED: uncharacterized protein LOC105770917 [Gossypium raimondii]	[more]
gi\|1009171508\|ref\|XP_015866775.1\|	1.2e-61	58.99	PREDICTED: uncharacterized protein LOC107404338 [Ziziphus jujuba]	[more]

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **INTERPRO**
Term	Definition
IPR025322	DUF4228_plant

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0008150	biological_process
cellular_component	GO:0005575	cellular_component
molecular_function	GO:0003674	molecular_function

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Cp4.1LG18g01870.1	Cp4.1LG18g01870.1	mRNA

InterPro

Analysis Name: InterPro Annotations of Cucurbita pepo
Date Performed: 2017-12-02


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR025322	Protein of unknown function DUF4228, plant	PFAM	PF14009	DUF4228	coord: 1..187 score: 5.4
None	No IPR available	PANTHER	PTHR33052	FAMILY NOT NAMED	coord: 2..206 score: 1.6
None	No IPR available	PANTHER	PTHR33052:SF4	SUBFAMILY NOT NAMED	coord: 2..206 score: 1.6

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
Cp4.1LG18g01870	CmaCh10G008970	Cucurbita maxima (Rimu)	cmacpeB080
Cp4.1LG18g01870	CmaCh11G008790	Cucurbita maxima (Rimu)	cmacpeB126
Cp4.1LG18g01870	CmoCh10G009340	Cucurbita moschata (Rifu)	cmocpeB055
Cp4.1LG18g01870	CmoCh11G008880	Cucurbita moschata (Rifu)	cmocpeB104
Cp4.1LG18g01870	Csa1G627480	Cucumber (Chinese Long) v2	cpecuB349
Cp4.1LG18g01870	MELO3C015127	Melon (DHL92) v3.5.1	cpemeB329
Cp4.1LG18g01870	ClCG03G012660	Watermelon (Charleston Gray)	cpewcgB327
Cp4.1LG18g01870	CSPI01G30920	Wild cucumber (PI 183967)	cpecpiB350
Cp4.1LG18g01870	Lsi06G005740	Bottle gourd (USVL1VR-Ls)	cpelsiB299
Cp4.1LG18g01870	MELO3C015127.2	Melon (DHL92) v3.6.1	cpemedB387
Cp4.1LG18g01870	CsaV3_1G043320	Cucumber (Chinese Long) v3	cpecucB0428
Cp4.1LG18g01870	Bhi02G001254	Wax gourd	cpewgoB0468
Cp4.1LG18g01870	CsGy1G030180	Cucumber (Gy14) v2	cgybcpeB039
Cp4.1LG18g01870	Carg17863	Silver-seed gourd	carcpeB1341
Cp4.1LG18g01870	Carg25419	Silver-seed gourd	carcpeB0595

The following gene(s) are paralogous to this gene:


Gene	Paralogue	Organism	Block
Cp4.1LG18g01870	Cp4.1LG04g12390	Cucurbita pepo (Zucchini)	cpecpeB363

The following block(s) are covering this gene:


Gene	Organism	Block
Cp4.1LG18g01870	Cucurbita pepo (Zucchini)	cpecpeB369
Cp4.1LG18g01870	Cucurbita maxima (Rimu)	cmacpeB632
Cp4.1LG18g01870	Cucurbita moschata (Rifu)	cmocpeB581
Cp4.1LG18g01870	Watermelon (97103) v1	cpewmB356