CsGy1G025460.1 (mRNA) Cucumber (Gy14) v2
The following sequences are available for this feature:
Legend: CDSexon Hold the cursor over a type above to highlight its positions in the sequence below.ATGTGTCCGAACACGATGGCTCCAACCAACACCACTGCCCCTTCAGAAGAAAACAAGAAGAAGAGATCAGCCTCAGCCTCAGCCTCGTCCGGTGAAGCTCAAGTTCAAGGAGATGCCAAGAGAAGCTGCCATGGCTCTTCTTCTTTTCCAATTGATCAGTATGTCTTCTTTTTAATCTTCATCTGTAACAATAGTTCTTCTAGTAATATTAAGCTTGTGGTATTTTAGGCATTAATTATTTTATTTTGATTTTTGTATAGTTCTGGATTTGGCTCCTCAGTTGATAATTTGATTGTTGGAGAAGGAGTTAATGGTTTTGTTGAGAAATGGAAAGAATTCGAGCCTGCGTATCGGCAAAAGGTATAGAACTATTTTGATTTAGTTATGTGTTCTGAATGTTTGTGCAAAAATCAAACGATCTCCATTCTCTCCAATAATCCATTTTGCATTTTTCAGGTTTTCAAGGACATGAATACCATGGCGCAGTCTATTCTTTCACCCATCACAATGTCAGTGTTTTAATTACACAATTTATATCATATGTTTTCAATTTATTGTCCTTTACATTGGTGGCCTCTTAATGATCTCATCAACTTTTCCATTCTGTTCCCTAGTAGATATGTTTCGTTTTATAATTCATTTTTCGTCTGTTAAACAGTTAACTGATGATAGCTATTATTAGTGATACCTTTCAATTTAATAAATGATTGTTTTGTATATAATTTTTTAAAATTTTCTCACGTTGAAAACTACCATTAGTGAATAAAATTAATGATAACTTAAAAGTTGATTAGAATTAGTGGGCTTGACTCTTACATTATTTTTTAAAATAATTAATATAGAAGTTTTTTTTTTTCTTTTTTACTCCTTATTACATTGTAGTTTTTTTTTTCGGTTCTCGAGTTTAATTTTCACGTAAGCCTTGGTTTCGTGTTTATTGCTTTTAGTACTAGTCATAAGATGTTGTAGGCCTTTTAACCCTTAATCTCTTAAGTTTTAACTTTAGAGATATATGATTGTCCAAACCTTAGCTTTAACCATGACCATGAGGTCATAGGATGATCCAAGCTAAGTCTTAACCTCACCCTCACCCGTTTCTTTAGTCTTAGAGTTATACAGGCTTTGAGCCTAAACCTATATTCTAATTTTCTGCCTCTTCTATAACACATTGATATATGTTCTCTATATGTGAAATTTATAATTGGCTATGATCATTGATATGAGTTTTATAAATGATAGAACACATCTATTGATGATAGAAGTTTATCACACATACATTTTGTAAAAGCTAAGGAAAAGTTTTATATCTATATATATATGATAAAAGGTTTAATTATATATATGTATTCACTGTTTGATTATTTGATCACCTTCATCGTACAGTTCTCTTTATAAAATGCTGGAGGATATCTGCTTTAATCGGACTTTAGCTCTTTCACAAATTGTGATTCCTTTTCATATAAAATTTGGTACGGTTATTATGTGTGTTTTTGTTACATAATATTTAACAAACTGTTTAATTTAATTTCTGTCCAAATTTAAAAATTATTAATAGAGAAAACAACATGAGAGTGGGAAAAGAAGTAACATGAAAGTTGATATTTGTGATGCCACAAATTTCAACACTCTATCATCTCCACGGGTCCATTGTGGTATGCTTCAGCCAAGTTCTTCATCCTCGATGAAGATTCCGATTCTGGAAATCGTCGAAAATTCATCAAAGATGTTTGTTTGGGAGTCGAAATTACAAATGAAAATTCATTAGTCCAGTTTGGTATGACTATTGGATATAAGTCGTTAATTCCAAACCCTTTAGATTTATGGTTAAACGAGAGAGAGGTATAATCAATATTTCTCATTTCTCTCCTTACAGGAAAGATGGTGCAATACACAACTTATCCTTTTTCCAAGGGATAAGCCAAAATGCAATGGAGATTGTGGGTGATTTCTTCGAGGATTATTATCGTCAAATGGGTCATACCTATATGAAAAAGGTACGTTACAATCTTTTTCTCTTTATCTTAAGCACACAATACTTGTATAAATATATGTAGAGTTGCATCTATTTTTTATTTTTTATTTTTTATTTTTTATACCACTCCAACCACGCACCTAACAAAAACCTTAACACTTTGAAAAATGAAAAGGTAGAAGAAGAAAGAAAAATTTATCATACAAACAATTGTGGTTCAACTCATCATGGTATGGTGGACTGTAAAATGATTGGTGGAACCGTTATAAAATTAAATCACCAAACAAAAAACGTAAAAGAAAAAACACGTAAATGAAGAGAGAATTGATATATAAATTTATATGATTCATTAATATTATTGTGTTAGCTTCGTTCCAACGATTTTATTAGAGAAAATGTATACTCATAGGACTAGAAAATTTACAGGGTGTTCTTCTTTAAACCTAAATCATAATTGTAAATAACTTGAAATAATATTAAATATGATGAATATAATTTCTCATTAGGGTTTTAGTGCTCCGAATCTTCACTGAGGCACGTTACCCTTGGACTCCTGCTGGCTTTGACCGATTAACAAGACTCCTTATTTGATTGATTGTAGTATGCTAGTGATAATTTCAAGGCATTTCCACCTACACTTATAATGCACATTAGAAGGTTATAAATGCACACAACCAAGAGTCGACGAGCACTTTTGTCAGCAAAATCCAGAATAACTCAAACACTTGTTGGTAAAGTTATTATAAGTCCTTTTGGCGTACGTGTTTCAACAGTAGTTAACATTCCCACGATGACTTTTTTAAAATTCATTGAATTATTTTGTAATTCTTTGGAACTTTCTGATTGTGATTCAGAACTAATTCATAAGGTCGTTTAAAGTAAGTTTTAATTAATTTGTTCATTTTGAATAGTTTTTTAGATAAAAGTTAAGGTTTTGAAGTGAGATCCAAATATTGAAATCTTGTTTTAATAATTCAGGAGGCTTCCAAAGAGCATAAGAGCACTACTCGAAGAAAAATAGGTAAGTAAGTTTCTAGCTACCTGGTTGGGCTTGGTTGTTATGTGTCATTCTGTTATTGTAGTTTATTTTTGCTATGTATAGATAAAATGCATGGCTCATGTGAACTGATTCTGAAATAGGAATCAATGATTGTTCTGCGATCTGGTTGGAATACGCCTGGATGCTTCTTAAAATGTTGTGTGCCATTCTGTTTACATGGTTGAACACACCTAAATGTTGGATGTTATGATTATGCTTTCTATCACGTGTGTCAATTGTTTCTGACTTGTTTGAGTGATAAGTATCATGTATGGGATGTGAAACATGATAAGTAAATCATGTATGAGTTGTGGAGTATGACGCGCGTAAATCATGTATGATTTGTGGAGCATGATGCACGTAAATCATGGGTTGCAAAATATGACACGTAAATCATGTATGTGTTAAGGAGTATGACACTTATGTCATGTATGGGTTACAAAACATAACATTAAATCATTATGGGTACAGTGTTATGGAGCATGATATGTAAATCGTGTATAGGTGACCAAGCATGACAAGTAAATCATGCATGAGTGATAGAACGTCATGACCTTAAATCATGTGCATGCACGTGTGATTTGCATGTCACAGTTCATGTGTAGCAAAATTTTAATTGTGATTAATCTTTCTGTAAAACCAAGCATCTTTTATTATTGTGTTCAACATGATCATGTCTAGCATGTATATTATTGTTTGATGGTTTCTTAGGTATGAGCTACTTTTTGTACGTGTTGTGTATTGACACCCCAAGTCTTTTGTAGGTGAAGATGAGAACTACAACACTGGAGGTAGTGGTGAAGAGGAGACATGA ATGTGTCCGAACACGATGGCTCCAACCAACACCACTGCCCCTTCAGAAGAAAACAAGAAGAAGAGATCAGCCTCAGCCTCAGCCTCGTCCGGTGAAGCTCAAGTTCAAGGAGATGCCAAGAGAAGCTGCCATGGCTCTTCTTCTTTTCCAATTGATCATTCTGGATTTGGCTCCTCAGTTGATAATTTGATTGTTGGAGAAGGAGTTAATGGTTTTGTTGAGAAATGGAAAGAATTCGAGCCTGCGTATCGGCAAAAGGTTTTCAAGGACATGAATACCATGGCGCAGTCTATTCTTTCACCCATCACAATGAAAGATGGTGCAATACACAACTTATCCTTTTTCCAAGGGATAAGCCAAAATGCAATGGAGATTGTGGGTGATTTCTTCGAGGATTATTATCGTCAAATGGGTCATACCTATATGAAAAAGGAGGCTTCCAAAGAGCATAAGAGCACTACTCGAAGAAAAATAGGTGAAGATGAGAACTACAACACTGGAGGTAGTGGTGAAGAGGAGACATGA ATGTGTCCGAACACGATGGCTCCAACCAACACCACTGCCCCTTCAGAAGAAAACAAGAAGAAGAGATCAGCCTCAGCCTCAGCCTCGTCCGGTGAAGCTCAAGTTCAAGGAGATGCCAAGAGAAGCTGCCATGGCTCTTCTTCTTTTCCAATTGATCATTCTGGATTTGGCTCCTCAGTTGATAATTTGATTGTTGGAGAAGGAGTTAATGGTTTTGTTGAGAAATGGAAAGAATTCGAGCCTGCGTATCGGCAAAAGGTTTTCAAGGACATGAATACCATGGCGCAGTCTATTCTTTCACCCATCACAATGAAAGATGGTGCAATACACAACTTATCCTTTTTCCAAGGGATAAGCCAAAATGCAATGGAGATTGTGGGTGATTTCTTCGAGGATTATTATCGTCAAATGGGTCATACCTATATGAAAAAGGAGGCTTCCAAAGAGCATAAGAGCACTACTCGAAGAAAAATAGGTGAAGATGAGAACTACAACACTGGAGGTAGTGGTGAAGAGGAGACATGA MCPNTMAPTNTTAPSEENKKKRSASASASSGEAQVQGDAKRSCHGSSSFPIDHSGFGSSVDNLIVGEGVNGFVEKWKEFEPAYRQKVFKDMNTMAQSILSPITMKDGAIHNLSFFQGISQNAMEIVGDFFEDYYRQMGHTYMKKEASKEHKSTTRRKIGEDENYNTGGSGEEET
BLAST of CsGy1G025460.1 vs. NCBI nr
Match: XP_004135592.1 (PREDICTED: uncharacterized protein LOC101221597 [Cucumis sativus]) HSP 1 Score: 299.3 bits (765), Expect = 8.6e-78 Identity = 174/174 (100.00%), Postives = 174/174 (100.00%), Query Frame = 0
BLAST of CsGy1G025460.1 vs. NCBI nr
Match: KGN66036.1 (hypothetical protein Csa_1G569140 [Cucumis sativus]) HSP 1 Score: 245.7 bits (626), Expect = 1.1e-61 Identity = 145/145 (100.00%), Postives = 145/145 (100.00%), Query Frame = 0
BLAST of CsGy1G025460.1 vs. NCBI nr
Match: XP_008450596.1 (PREDICTED: uncharacterized protein LOC103492138 isoform X1 [Cucumis melo]) HSP 1 Score: 120.2 bits (300), Expect = 7.1e-24 Identity = 81/158 (51.27%), Postives = 105/158 (66.46%), Query Frame = 0
BLAST of CsGy1G025460.1 vs. NCBI nr
Match: XP_008450598.1 (PREDICTED: uncharacterized protein LOC103492138 isoform X2 [Cucumis melo]) HSP 1 Score: 71.2 bits (173), Expect = 3.8e-09 Identity = 50/97 (51.55%), Postives = 61/97 (62.89%), Query Frame = 0
BLAST of CsGy1G025460.1 vs. TrEMBL
Match: tr|A0A0A0M1H1|A0A0A0M1H1_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_1G569140 PE=4 SV=1) HSP 1 Score: 245.7 bits (626), Expect = 7.4e-62 Identity = 145/145 (100.00%), Postives = 145/145 (100.00%), Query Frame = 0
BLAST of CsGy1G025460.1 vs. TrEMBL
Match: tr|A0A1S3BPK9|A0A1S3BPK9_CUCME (uncharacterized protein LOC103492138 isoform X1 OS=Cucumis melo OX=3656 GN=LOC103492138 PE=4 SV=1) HSP 1 Score: 120.2 bits (300), Expect = 4.7e-24 Identity = 81/158 (51.27%), Postives = 105/158 (66.46%), Query Frame = 0
BLAST of CsGy1G025460.1 vs. TrEMBL
Match: tr|A0A1S3BQ80|A0A1S3BQ80_CUCME (uncharacterized protein LOC103492138 isoform X2 OS=Cucumis melo OX=3656 GN=LOC103492138 PE=4 SV=1) HSP 1 Score: 71.2 bits (173), Expect = 2.5e-09 Identity = 50/97 (51.55%), Postives = 61/97 (62.89%), Query Frame = 0
The following BLAST results are available for this feature:
GO Assignments
This mRNA is annotated with the following GO terms.
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following exon feature(s) are a part of this mRNA:
Analysis Name: InterPro Annotations of cucumber Gy14 genome (v2)
Date Performed: 2018-09-25
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