CsGy1G025460 (gene) Cucumber (Gy14) v2

NameCsGy1G025460
Typegene
OrganismCucumis sativus (Cucumber (Gy14) v2)
DescriptionUncharacterized protein
LocationChr1 : 24380825 .. 24384649 (-)
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDSexon
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGTGTCCGAACACGATGGCTCCAACCAACACCACTGCCCCTTCAGAAGAAAACAAGAAGAAGAGATCAGCCTCAGCCTCAGCCTCGTCCGGTGAAGCTCAAGTTCAAGGAGATGCCAAGAGAAGCTGCCATGGCTCTTCTTCTTTTCCAATTGATCAGTATGTCTTCTTTTTAATCTTCATCTGTAACAATAGTTCTTCTAGTAATATTAAGCTTGTGGTATTTTAGGCATTAATTATTTTATTTTGATTTTTGTATAGTTCTGGATTTGGCTCCTCAGTTGATAATTTGATTGTTGGAGAAGGAGTTAATGGTTTTGTTGAGAAATGGAAAGAATTCGAGCCTGCGTATCGGCAAAAGGTATAGAACTATTTTGATTTAGTTATGTGTTCTGAATGTTTGTGCAAAAATCAAACGATCTCCATTCTCTCCAATAATCCATTTTGCATTTTTCAGGTTTTCAAGGACATGAATACCATGGCGCAGTCTATTCTTTCACCCATCACAATGTCAGTGTTTTAATTACACAATTTATATCATATGTTTTCAATTTATTGTCCTTTACATTGGTGGCCTCTTAATGATCTCATCAACTTTTCCATTCTGTTCCCTAGTAGATATGTTTCGTTTTATAATTCATTTTTCGTCTGTTAAACAGTTAACTGATGATAGCTATTATTAGTGATACCTTTCAATTTAATAAATGATTGTTTTGTATATAATTTTTTAAAATTTTCTCACGTTGAAAACTACCATTAGTGAATAAAATTAATGATAACTTAAAAGTTGATTAGAATTAGTGGGCTTGACTCTTACATTATTTTTTAAAATAATTAATATAGAAGTTTTTTTTTTTCTTTTTTACTCCTTATTACATTGTAGTTTTTTTTTTCGGTTCTCGAGTTTAATTTTCACGTAAGCCTTGGTTTCGTGTTTATTGCTTTTAGTACTAGTCATAAGATGTTGTAGGCCTTTTAACCCTTAATCTCTTAAGTTTTAACTTTAGAGATATATGATTGTCCAAACCTTAGCTTTAACCATGACCATGAGGTCATAGGATGATCCAAGCTAAGTCTTAACCTCACCCTCACCCGTTTCTTTAGTCTTAGAGTTATACAGGCTTTGAGCCTAAACCTATATTCTAATTTTCTGCCTCTTCTATAACACATTGATATATGTTCTCTATATGTGAAATTTATAATTGGCTATGATCATTGATATGAGTTTTATAAATGATAGAACACATCTATTGATGATAGAAGTTTATCACACATACATTTTGTAAAAGCTAAGGAAAAGTTTTATATCTATATATATATGATAAAAGGTTTAATTATATATATGTATTCACTGTTTGATTATTTGATCACCTTCATCGTACAGTTCTCTTTATAAAATGCTGGAGGATATCTGCTTTAATCGGACTTTAGCTCTTTCACAAATTGTGATTCCTTTTCATATAAAATTTGGTACGGTTATTATGTGTGTTTTTGTTACATAATATTTAACAAACTGTTTAATTTAATTTCTGTCCAAATTTAAAAATTATTAATAGAGAAAACAACATGAGAGTGGGAAAAGAAGTAACATGAAAGTTGATATTTGTGATGCCACAAATTTCAACACTCTATCATCTCCACGGGTCCATTGTGGTATGCTTCAGCCAAGTTCTTCATCCTCGATGAAGATTCCGATTCTGGAAATCGTCGAAAATTCATCAAAGATGTTTGTTTGGGAGTCGAAATTACAAATGAAAATTCATTAGTCCAGTTTGGTATGACTATTGGATATAAGTCGTTAATTCCAAACCCTTTAGATTTATGGTTAAACGAGAGAGAGGTATAATCAATATTTCTCATTTCTCTCCTTACAGGAAAGATGGTGCAATACACAACTTATCCTTTTTCCAAGGGATAAGCCAAAATGCAATGGAGATTGTGGGTGATTTCTTCGAGGATTATTATCGTCAAATGGGTCATACCTATATGAAAAAGGTACGTTACAATCTTTTTCTCTTTATCTTAAGCACACAATACTTGTATAAATATATGTAGAGTTGCATCTATTTTTTATTTTTTATTTTTTATTTTTTATACCACTCCAACCACGCACCTAACAAAAACCTTAACACTTTGAAAAATGAAAAGGTAGAAGAAGAAAGAAAAATTTATCATACAAACAATTGTGGTTCAACTCATCATGGTATGGTGGACTGTAAAATGATTGGTGGAACCGTTATAAAATTAAATCACCAAACAAAAAACGTAAAAGAAAAAACACGTAAATGAAGAGAGAATTGATATATAAATTTATATGATTCATTAATATTATTGTGTTAGCTTCGTTCCAACGATTTTATTAGAGAAAATGTATACTCATAGGACTAGAAAATTTACAGGGTGTTCTTCTTTAAACCTAAATCATAATTGTAAATAACTTGAAATAATATTAAATATGATGAATATAATTTCTCATTAGGGTTTTAGTGCTCCGAATCTTCACTGAGGCACGTTACCCTTGGACTCCTGCTGGCTTTGACCGATTAACAAGACTCCTTATTTGATTGATTGTAGTATGCTAGTGATAATTTCAAGGCATTTCCACCTACACTTATAATGCACATTAGAAGGTTATAAATGCACACAACCAAGAGTCGACGAGCACTTTTGTCAGCAAAATCCAGAATAACTCAAACACTTGTTGGTAAAGTTATTATAAGTCCTTTTGGCGTACGTGTTTCAACAGTAGTTAACATTCCCACGATGACTTTTTTAAAATTCATTGAATTATTTTGTAATTCTTTGGAACTTTCTGATTGTGATTCAGAACTAATTCATAAGGTCGTTTAAAGTAAGTTTTAATTAATTTGTTCATTTTGAATAGTTTTTTAGATAAAAGTTAAGGTTTTGAAGTGAGATCCAAATATTGAAATCTTGTTTTAATAATTCAGGAGGCTTCCAAAGAGCATAAGAGCACTACTCGAAGAAAAATAGGTAAGTAAGTTTCTAGCTACCTGGTTGGGCTTGGTTGTTATGTGTCATTCTGTTATTGTAGTTTATTTTTGCTATGTATAGATAAAATGCATGGCTCATGTGAACTGATTCTGAAATAGGAATCAATGATTGTTCTGCGATCTGGTTGGAATACGCCTGGATGCTTCTTAAAATGTTGTGTGCCATTCTGTTTACATGGTTGAACACACCTAAATGTTGGATGTTATGATTATGCTTTCTATCACGTGTGTCAATTGTTTCTGACTTGTTTGAGTGATAAGTATCATGTATGGGATGTGAAACATGATAAGTAAATCATGTATGAGTTGTGGAGTATGACGCGCGTAAATCATGTATGATTTGTGGAGCATGATGCACGTAAATCATGGGTTGCAAAATATGACACGTAAATCATGTATGTGTTAAGGAGTATGACACTTATGTCATGTATGGGTTACAAAACATAACATTAAATCATTATGGGTACAGTGTTATGGAGCATGATATGTAAATCGTGTATAGGTGACCAAGCATGACAAGTAAATCATGCATGAGTGATAGAACGTCATGACCTTAAATCATGTGCATGCACGTGTGATTTGCATGTCACAGTTCATGTGTAGCAAAATTTTAATTGTGATTAATCTTTCTGTAAAACCAAGCATCTTTTATTATTGTGTTCAACATGATCATGTCTAGCATGTATATTATTGTTTGATGGTTTCTTAGGTATGAGCTACTTTTTGTACGTGTTGTGTATTGACACCCCAAGTCTTTTGTAGGTGAAGATGAGAACTACAACACTGGAGGTAGTGGTGAAGAGGAGACATGA

mRNA sequence

ATGTGTCCGAACACGATGGCTCCAACCAACACCACTGCCCCTTCAGAAGAAAACAAGAAGAAGAGATCAGCCTCAGCCTCAGCCTCGTCCGGTGAAGCTCAAGTTCAAGGAGATGCCAAGAGAAGCTGCCATGGCTCTTCTTCTTTTCCAATTGATCATTCTGGATTTGGCTCCTCAGTTGATAATTTGATTGTTGGAGAAGGAGTTAATGGTTTTGTTGAGAAATGGAAAGAATTCGAGCCTGCGTATCGGCAAAAGGTTTTCAAGGACATGAATACCATGGCGCAGTCTATTCTTTCACCCATCACAATGAAAGATGGTGCAATACACAACTTATCCTTTTTCCAAGGGATAAGCCAAAATGCAATGGAGATTGTGGGTGATTTCTTCGAGGATTATTATCGTCAAATGGGTCATACCTATATGAAAAAGGAGGCTTCCAAAGAGCATAAGAGCACTACTCGAAGAAAAATAGGTGAAGATGAGAACTACAACACTGGAGGTAGTGGTGAAGAGGAGACATGA

Coding sequence (CDS)

ATGTGTCCGAACACGATGGCTCCAACCAACACCACTGCCCCTTCAGAAGAAAACAAGAAGAAGAGATCAGCCTCAGCCTCAGCCTCGTCCGGTGAAGCTCAAGTTCAAGGAGATGCCAAGAGAAGCTGCCATGGCTCTTCTTCTTTTCCAATTGATCATTCTGGATTTGGCTCCTCAGTTGATAATTTGATTGTTGGAGAAGGAGTTAATGGTTTTGTTGAGAAATGGAAAGAATTCGAGCCTGCGTATCGGCAAAAGGTTTTCAAGGACATGAATACCATGGCGCAGTCTATTCTTTCACCCATCACAATGAAAGATGGTGCAATACACAACTTATCCTTTTTCCAAGGGATAAGCCAAAATGCAATGGAGATTGTGGGTGATTTCTTCGAGGATTATTATCGTCAAATGGGTCATACCTATATGAAAAAGGAGGCTTCCAAAGAGCATAAGAGCACTACTCGAAGAAAAATAGGTGAAGATGAGAACTACAACACTGGAGGTAGTGGTGAAGAGGAGACATGA

Protein sequence

MCPNTMAPTNTTAPSEENKKKRSASASASSGEAQVQGDAKRSCHGSSSFPIDHSGFGSSVDNLIVGEGVNGFVEKWKEFEPAYRQKVFKDMNTMAQSILSPITMKDGAIHNLSFFQGISQNAMEIVGDFFEDYYRQMGHTYMKKEASKEHKSTTRRKIGEDENYNTGGSGEEET
BLAST of CsGy1G025460 vs. NCBI nr
Match: XP_004135592.1 (PREDICTED: uncharacterized protein LOC101221597 [Cucumis sativus])

HSP 1 Score: 299.3 bits (765), Expect = 8.6e-78
Identity = 174/174 (100.00%), Postives = 174/174 (100.00%), Query Frame = 0

Query: 1   MCPNTMAPTNTTAXXXXXXXXXXXXXXXXXXXXXXXGDAKRSCHGSSSFPIDHSGFGSSV 60
           MCPNTMAPTNTTAXXXXXXXXXXXXXXXXXXXXXXXGDAKRSCHGSSSFPIDHSGFGSSV
Sbjct: 1   MCPNTMAPTNTTAXXXXXXXXXXXXXXXXXXXXXXXGDAKRSCHGSSSFPIDHSGFGSSV 60

Query: 61  DNLIVGEGVNGFVEKWKEFEPAYRQKVFKDMNTMAQSILSPITMKDGAIHNLSFFQGISQ 120
           DNLIVGEGVNGFVEKWKEFEPAYRQKVFKDMNTMAQSILSPITMKDGAIHNLSFFQGISQ
Sbjct: 61  DNLIVGEGVNGFVEKWKEFEPAYRQKVFKDMNTMAQSILSPITMKDGAIHNLSFFQGISQ 120

Query: 121 NAMEIVGDFFEDYYRQMGHTYMKKEASKEHKSTTRRKIGEDENYNTGGSGEEET 175
           NAMEIVGDFFEDYYRQMGHTYMKKEASKEHKSTTRRKIGEDENYNTGGSGEEET
Sbjct: 121 NAMEIVGDFFEDYYRQMGHTYMKKEASKEHKSTTRRKIGEDENYNTGGSGEEET 174

BLAST of CsGy1G025460 vs. NCBI nr
Match: KGN66036.1 (hypothetical protein Csa_1G569140 [Cucumis sativus])

HSP 1 Score: 245.7 bits (626), Expect = 1.1e-61
Identity = 145/145 (100.00%), Postives = 145/145 (100.00%), Query Frame = 0

Query: 1   MCPNTMAPTNTTAXXXXXXXXXXXXXXXXXXXXXXXGDAKRSCHGSSSFPIDHSGFGSSV 60
           MCPNTMAPTNTTAXXXXXXXXXXXXXXXXXXXXXXXGDAKRSCHGSSSFPIDHSGFGSSV
Sbjct: 1   MCPNTMAPTNTTAXXXXXXXXXXXXXXXXXXXXXXXGDAKRSCHGSSSFPIDHSGFGSSV 60

Query: 61  DNLIVGEGVNGFVEKWKEFEPAYRQKVFKDMNTMAQSILSPITMKDGAIHNLSFFQGISQ 120
           DNLIVGEGVNGFVEKWKEFEPAYRQKVFKDMNTMAQSILSPITMKDGAIHNLSFFQGISQ
Sbjct: 61  DNLIVGEGVNGFVEKWKEFEPAYRQKVFKDMNTMAQSILSPITMKDGAIHNLSFFQGISQ 120

Query: 121 NAMEIVGDFFEDYYRQMGHTYMKKE 146
           NAMEIVGDFFEDYYRQMGHTYMKKE
Sbjct: 121 NAMEIVGDFFEDYYRQMGHTYMKKE 145

BLAST of CsGy1G025460 vs. NCBI nr
Match: XP_008450596.1 (PREDICTED: uncharacterized protein LOC103492138 isoform X1 [Cucumis melo])

HSP 1 Score: 120.2 bits (300), Expect = 7.1e-24
Identity = 81/158 (51.27%), Postives = 105/158 (66.46%), Query Frame = 0

Query: 37  GDAKRSCHG-SSSFPIDHSGFGSSVDNLIVGEGVNGFVEKWK-EFEPAYRQKVFKDMNTM 96
           G AKRS HG SSSFPID+      +D+  + EG    V+KWK ++E A+R++V KD+++ 
Sbjct: 35  GAAKRSSHGSSSSFPIDYGFDFVIIDDPKIEEG----VKKWKLDYEAAFRRQVAKDIDSR 94

Query: 97  AQSILSPITMKDGA--IH-NLSFFQGISQNAMEIVGDFFEDYYRQMGHTYMKKEAS-KEH 156
           A ++LSP+TM+DGA  +H N SF QGISQ  MEIVGDFFED+  QMG T  +KEAS KEH
Sbjct: 95  ALALLSPLTMEDGATQLHDNSSFIQGISQKGMEIVGDFFEDFC-QMGRTIPEKEASTKEH 154

Query: 157 KSTTRRK----------------IGEDENYNTGGSGEE 173
           KST R+K                +GE E+YN GG+GEE
Sbjct: 155 KSTPRKKGEDENYVDNGGATPSFVGEGEDYNLGGAGEE 187

BLAST of CsGy1G025460 vs. NCBI nr
Match: XP_008450598.1 (PREDICTED: uncharacterized protein LOC103492138 isoform X2 [Cucumis melo])

HSP 1 Score: 71.2 bits (173), Expect = 3.8e-09
Identity = 50/97 (51.55%), Postives = 61/97 (62.89%), Query Frame = 0

Query: 96  QSILSPITMKDGA--IH-NLSFFQGISQNAMEIVGDFFEDYYRQMGHTYMKKEAS-KEHK 155
           +  +SP+  +DGA  +H N SF QGISQ  MEIVGDFFED+  QMG T  +KEAS KEHK
Sbjct: 56  EKFISPVG-EDGATQLHDNSSFIQGISQKGMEIVGDFFEDFC-QMGRTIPEKEASTKEHK 115

Query: 156 STTRRK----------------IGEDENYNTGGSGEE 173
           ST R+K                +GE E+YN GG+GEE
Sbjct: 116 STPRKKGEDENYVDNGGATPSFVGEGEDYNLGGAGEE 150

BLAST of CsGy1G025460 vs. TrEMBL
Match: tr|A0A0A0M1H1|A0A0A0M1H1_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_1G569140 PE=4 SV=1)

HSP 1 Score: 245.7 bits (626), Expect = 7.4e-62
Identity = 145/145 (100.00%), Postives = 145/145 (100.00%), Query Frame = 0

Query: 1   MCPNTMAPTNTTAXXXXXXXXXXXXXXXXXXXXXXXGDAKRSCHGSSSFPIDHSGFGSSV 60
           MCPNTMAPTNTTAXXXXXXXXXXXXXXXXXXXXXXXGDAKRSCHGSSSFPIDHSGFGSSV
Sbjct: 1   MCPNTMAPTNTTAXXXXXXXXXXXXXXXXXXXXXXXGDAKRSCHGSSSFPIDHSGFGSSV 60

Query: 61  DNLIVGEGVNGFVEKWKEFEPAYRQKVFKDMNTMAQSILSPITMKDGAIHNLSFFQGISQ 120
           DNLIVGEGVNGFVEKWKEFEPAYRQKVFKDMNTMAQSILSPITMKDGAIHNLSFFQGISQ
Sbjct: 61  DNLIVGEGVNGFVEKWKEFEPAYRQKVFKDMNTMAQSILSPITMKDGAIHNLSFFQGISQ 120

Query: 121 NAMEIVGDFFEDYYRQMGHTYMKKE 146
           NAMEIVGDFFEDYYRQMGHTYMKKE
Sbjct: 121 NAMEIVGDFFEDYYRQMGHTYMKKE 145

BLAST of CsGy1G025460 vs. TrEMBL
Match: tr|A0A1S3BPK9|A0A1S3BPK9_CUCME (uncharacterized protein LOC103492138 isoform X1 OS=Cucumis melo OX=3656 GN=LOC103492138 PE=4 SV=1)

HSP 1 Score: 120.2 bits (300), Expect = 4.7e-24
Identity = 81/158 (51.27%), Postives = 105/158 (66.46%), Query Frame = 0

Query: 37  GDAKRSCHG-SSSFPIDHSGFGSSVDNLIVGEGVNGFVEKWK-EFEPAYRQKVFKDMNTM 96
           G AKRS HG SSSFPID+      +D+  + EG    V+KWK ++E A+R++V KD+++ 
Sbjct: 35  GAAKRSSHGSSSSFPIDYGFDFVIIDDPKIEEG----VKKWKLDYEAAFRRQVAKDIDSR 94

Query: 97  AQSILSPITMKDGA--IH-NLSFFQGISQNAMEIVGDFFEDYYRQMGHTYMKKEAS-KEH 156
           A ++LSP+TM+DGA  +H N SF QGISQ  MEIVGDFFED+  QMG T  +KEAS KEH
Sbjct: 95  ALALLSPLTMEDGATQLHDNSSFIQGISQKGMEIVGDFFEDFC-QMGRTIPEKEASTKEH 154

Query: 157 KSTTRRK----------------IGEDENYNTGGSGEE 173
           KST R+K                +GE E+YN GG+GEE
Sbjct: 155 KSTPRKKGEDENYVDNGGATPSFVGEGEDYNLGGAGEE 187

BLAST of CsGy1G025460 vs. TrEMBL
Match: tr|A0A1S3BQ80|A0A1S3BQ80_CUCME (uncharacterized protein LOC103492138 isoform X2 OS=Cucumis melo OX=3656 GN=LOC103492138 PE=4 SV=1)

HSP 1 Score: 71.2 bits (173), Expect = 2.5e-09
Identity = 50/97 (51.55%), Postives = 61/97 (62.89%), Query Frame = 0

Query: 96  QSILSPITMKDGA--IH-NLSFFQGISQNAMEIVGDFFEDYYRQMGHTYMKKEAS-KEHK 155
           +  +SP+  +DGA  +H N SF QGISQ  MEIVGDFFED+  QMG T  +KEAS KEHK
Sbjct: 56  EKFISPVG-EDGATQLHDNSSFIQGISQKGMEIVGDFFEDFC-QMGRTIPEKEASTKEHK 115

Query: 156 STTRRK----------------IGEDENYNTGGSGEE 173
           ST R+K                +GE E+YN GG+GEE
Sbjct: 116 STPRKKGEDENYVDNGGATPSFVGEGEDYNLGGAGEE 150

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
XP_004135592.18.6e-78100.00PREDICTED: uncharacterized protein LOC101221597 [Cucumis sativus][more]
KGN66036.11.1e-61100.00hypothetical protein Csa_1G569140 [Cucumis sativus][more]
XP_008450596.17.1e-2451.27PREDICTED: uncharacterized protein LOC103492138 isoform X1 [Cucumis melo][more]
XP_008450598.13.8e-0951.55PREDICTED: uncharacterized protein LOC103492138 isoform X2 [Cucumis melo][more]
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
tr|A0A0A0M1H1|A0A0A0M1H1_CUCSA7.4e-62100.00Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_1G569140 PE=4 SV=1[more]
tr|A0A1S3BPK9|A0A1S3BPK9_CUCME4.7e-2451.27uncharacterized protein LOC103492138 isoform X1 OS=Cucumis melo OX=3656 GN=LOC10... [more]
tr|A0A1S3BQ80|A0A1S3BQ80_CUCME2.5e-0951.55uncharacterized protein LOC103492138 isoform X2 OS=Cucumis melo OX=3656 GN=LOC10... [more]
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0008150 biological_process
cellular_component GO:0005575 cellular_component
molecular_function GO:0003674 molecular_function

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
CsGy1G025460.1CsGy1G025460.1mRNA


Analysis Name: InterPro Annotations of cucumber Gy14 genome (v2)
Date Performed: 2018-09-25
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 143..174
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 143..162

The following gene(s) are paralogous to this gene:

None