CsGy1G025200 (gene) Cucumber (Gy14) v2
The following sequences are available for this feature:
Legend: five_prime_UTRexonCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.CTTCTTTCTTCTTGGTTAATTTTCCTCACTCTCTCCCTTTCAGTCCAATGGCTTCCCCAATTAGCTTCCTCCCCATTGCTCTCGCTCTTGCTGTCTTGCTCCGCTGCCCCTCAGGTCATCTCCATGTCATTCGGGAACTCAAACCCGATACAGTTTTCCCCTTTTATTTTTCGTTTTCTTAATCGAAAGTTTGCATGGTATTGGTTTTTTATTTGAAGAAGAAGATGGTTTTAAGTAATTCTCATGATATGATCTATTTGTGTGGTGTTTTCTGAATTGTGACAGTTTATAGTGATGATCAGGAGATTCCTGGACAAATGGTGGTTGAAGGCTTCAAATGTTTTGACAATAAGTTTGTGAGTTTTTCTTATCCCTTTTAATTATTTTTCTTAAGATGATGAGTTGCATAATGTTTTGTTTATTATTTTTATAAGCTTTTATTGTTTTTAATAGATATACAATGGTTGTGAAAGTGCTTATAGATTGAACCCAAGTGGGAGTTTCAATGTCCCTCCCGAGGCTACTAACCTATTTTGCAATGGACCATGTTTGATCGAAACACAACTTCTGCTCAACTGCCTTGACAACACTTTTCAAAACTTCTTGTTCTACAACAAAGCCACCGCACAAAGCGTTCGAAACGCCCTCCGTGTTGGCTGCAGCTACTCGAGCCAAAGAGGTAGGCCATACGTTGTTGGCCAGCTACGTACCTTATGTTAACTTACAGAATGTGTATTATTGCTAATTTATATAAAAAAAAGAATTGTTATGTAAATAGTTTAGAATGATATAATTTGTAACACATGATCATCTTATTTGCCATTTGTTGTTTAATTGATTTAGGGAACTTCAATCAAGGATTGTTCATGCAAGGTGAATTTAGTGAAGCTCACACCTTCCAAAAATGGTTCATCCTCCATTATTCTCTTCTTTTTCTTGTTGGGTGTTGTTGTTTTCTCATCTTATAACAATATCTTGATACTAATATACATAAAAAAGAACACTACATTTATTGACATCATAACATTACTCTATTTGAGACTCTCAATATGTACTCTTCTCTCTTTGTAAATTTACACTTCACTCTTCTTTCTTCAAAGGCAAAGAAACGCAGCCAAACCCATTTCTCTCCATTTTGTTTGTTTCTCTTTGCTTGTGAG CTTCTTTCTTCTTGGTTAATTTTCCTCACTCTCTCCCTTTCAGTCCAATGGCTTCCCCAATTAGCTTCCTCCCCATTGCTCTCGCTCTTGCTGTCTTGCTCCGCTGCCCCTCAGTTTATAGTGATGATCAGGAGATTCCTGGACAAATGGTGGTTGAAGGCTTCAAATGTTTTGACAATAAGTTTATATACAATGGTTGTGAAAGTGCTTATAGATTGAACCCAAGTGGGAGTTTCAATGTCCCTCCCGAGGCTACTAACCTATTTTGCAATGGACCATGTTTGATCGAAACACAACTTCTGCTCAACTGCCTTGACAACACTTTTCAAAACTTCTTGTTCTACAACAAAGCCACCGCACAAAGCGTTCGAAACGCCCTCCGTGTTGGCTGCAGCTACTCGAGCCAAAGAGGGAACTTCAATCAAGGATTGTTCATGCAAGGTGAATTTAGTGAAGCTCACACCTTCCAAAAATGGTTCATCCTCCATTATTCTCTTCTTTTTCTTGTTGGGTGTTGTTGTTTTCTCATCTTATAACAATATCTTGATACTAATATACATAAAAAAGAACACTACATTTATTGACATCATAACATTACTCTATTTGAGACTCTCAATATGTACTCTTCTCTCTTTGTAAATTTACACTTCACTCTTCTTTCTTCAAAGGCAAAGAAACGCAGCCAAACCCATTTCTCTCCATTTTGTTTGTTTCTCTTTGCTTGTGAG ATGGCTTCCCCAATTAGCTTCCTCCCCATTGCTCTCGCTCTTGCTGTCTTGCTCCGCTGCCCCTCAGTTTATAGTGATGATCAGGAGATTCCTGGACAAATGGTGGTTGAAGGCTTCAAATGTTTTGACAATAAGTTTATATACAATGGTTGTGAAAGTGCTTATAGATTGAACCCAAGTGGGAGTTTCAATGTCCCTCCCGAGGCTACTAACCTATTTTGCAATGGACCATGTTTGATCGAAACACAACTTCTGCTCAACTGCCTTGACAACACTTTTCAAAACTTCTTGTTCTACAACAAAGCCACCGCACAAAGCGTTCGAAACGCCCTCCGTGTTGGCTGCAGCTACTCGAGCCAAAGAGGGAACTTCAATCAAGGATTGTTCATGCAAGGTGAATTTAGTGAAGCTCACACCTTCCAAAAATGGTTCATCCTCCATTATTCTCTTCTTTTTCTTGTTGGGTGTTGTTGTTTTCTCATCTTATAA MASPISFLPIALALAVLLRCPSVYSDDQEIPGQMVVEGFKCFDNKFIYNGCESAYRLNPSGSFNVPPEATNLFCNGPCLIETQLLLNCLDNTFQNFLFYNKATAQSVRNALRVGCSYSSQRGNFNQGLFMQGEFSEAHTFQKWFILHYSLLFLVGCCCFLIL
BLAST of CsGy1G025200 vs. NCBI nr
Match: KGN66014.1 (hypothetical protein Csa_1G561940 [Cucumis sativus]) HSP 1 Score: 316.6 bits (810), Expect = 4.8e-83 Identity = 156/169 (92.31%), Postives = 157/169 (92.90%), Query Frame = 0
BLAST of CsGy1G025200 vs. NCBI nr
Match: XP_004135766.2 (PREDICTED: uncharacterized protein LOC101204762 [Cucumis sativus]) HSP 1 Score: 294.7 bits (753), Expect = 2.0e-76 Identity = 141/144 (97.92%), Postives = 142/144 (98.61%), Query Frame = 0
BLAST of CsGy1G025200 vs. NCBI nr
Match: XP_008450550.1 (PREDICTED: uncharacterized protein LOC103492117 [Cucumis melo]) HSP 1 Score: 290.4 bits (742), Expect = 3.7e-75 Identity = 142/162 (87.65%), Postives = 149/162 (91.98%), Query Frame = 0
BLAST of CsGy1G025200 vs. NCBI nr
Match: XP_022158829.1 (uncharacterized protein LOC111025289 [Momordica charantia]) HSP 1 Score: 238.4 bits (607), Expect = 1.7e-59 Identity = 117/161 (72.67%), Postives = 136/161 (84.47%), Query Frame = 0
BLAST of CsGy1G025200 vs. NCBI nr
Match: XP_022989485.1 (uncharacterized protein LOC111486529 [Cucurbita maxima]) HSP 1 Score: 217.6 bits (553), Expect = 3.1e-53 Identity = 107/160 (66.88%), Postives = 123/160 (76.88%), Query Frame = 0
BLAST of CsGy1G025200 vs. TAIR10
Match: AT1G56320.1 (BEST Arabidopsis thaliana protein match is: Glycine-rich protein family (TAIR:AT5G49350.2)) HSP 1 Score: 122.5 bits (306), Expect = 2.4e-28 Identity = 54/101 (53.47%), Postives = 69/101 (68.32%), Query Frame = 0
BLAST of CsGy1G025200 vs. TAIR10
Match: AT5G49350.1 (Glycine-rich protein family) HSP 1 Score: 95.1 bits (235), Expect = 4.2e-20 Identity = 38/95 (40.00%), Postives = 57/95 (60.00%), Query Frame = 0
BLAST of CsGy1G025200 vs. TrEMBL
Match: tr|A0A0A0LYD5|A0A0A0LYD5_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_1G561940 PE=4 SV=1) HSP 1 Score: 316.6 bits (810), Expect = 3.2e-83 Identity = 156/169 (92.31%), Postives = 157/169 (92.90%), Query Frame = 0
BLAST of CsGy1G025200 vs. TrEMBL
Match: tr|A0A1S3BPH6|A0A1S3BPH6_CUCME (uncharacterized protein LOC103492117 OS=Cucumis melo OX=3656 GN=LOC103492117 PE=4 SV=1) HSP 1 Score: 290.4 bits (742), Expect = 2.5e-75 Identity = 142/162 (87.65%), Postives = 149/162 (91.98%), Query Frame = 0
BLAST of CsGy1G025200 vs. TrEMBL
Match: tr|A0A2I4EMS4|A0A2I4EMS4_9ROSI (uncharacterized protein LOC108991012 OS=Juglans regia OX=51240 GN=LOC108991012 PE=4 SV=1) HSP 1 Score: 159.8 bits (403), Expect = 5.0e-36 Identity = 79/143 (55.24%), Postives = 94/143 (65.73%), Query Frame = 0
BLAST of CsGy1G025200 vs. TrEMBL
Match: tr|G7I9G7|G7I9G7_MEDTR (Uncharacterized protein OS=Medicago truncatula OX=3880 GN=11412322 PE=4 SV=2) HSP 1 Score: 154.1 bits (388), Expect = 2.7e-34 Identity = 72/132 (54.55%), Postives = 91/132 (68.94%), Query Frame = 0
BLAST of CsGy1G025200 vs. TrEMBL
Match: tr|K7LJG9|K7LJG9_SOYBN (Uncharacterized protein OS=Glycine max OX=3847 GN=GLYMA_10G147900 PE=4 SV=1) HSP 1 Score: 153.7 bits (387), Expect = 3.6e-34 Identity = 69/128 (53.91%), Postives = 91/128 (71.09%), Query Frame = 0
The following BLAST results are available for this feature:
GO Assignments
This gene is annotated with the following GO terms.
The following mRNA feature(s) are a part of this gene:
Analysis Name: InterPro Annotations of cucumber Gy14 genome (v2)
Date Performed: 2018-09-25
The following gene(s) are orthologous to this gene:
The following gene(s) are paralogous to this gene: None The following block(s) are covering this gene:
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