CsGy1G023950 (gene) Cucumber (Gy14) v2
The following sequences are available for this feature:
Legend: five_prime_UTRexonCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.GAAGGAAGGGAATTGGTGAAATTGAGCATAGTTGTGAGTTAGCCCAATTATTACTCTCTCATAACCTAAAAAGCCCATTTCTCTATCAGTCCATTGCCACCTACCGATGCTCATTATCCCTTCTTCCTTCTCCGCAACAACCTCCACCGCCACACCCCCATTCCACCGTCATTCACTCGCCGACACGCACCACTACCCACCACATTCCCTCATCTTCCGCCCAGGTTATCTCTCTCTCTCTCTCTCTCTCTCTCTCAGTCTCAGTCTCTGGTTTCTAAGCCTTTTCTTTTCCTTTCTATTCTCTTTTCTTTCATCGATTCGACCAATTCGATAACTGGGTACTTTTGGAATGATCAACTGATTAAAATTACACTTGTATAGCCTCTACTTAAGCTTTTGAATTTAGGGTAGATATTACAAAAATATGGCTCTATGCGATTATGAATAGCTATTTTATCTGGTTATGTCTGGTAATTGTTATGATTCATACATGATATGAGAACTTGGATGTCAGGGTGCTGGAGTGTGGCATATGACCATAGGGTGTTTATCAAAGGATGAGCAGCATGCAGATAACTGCTACACAGAATTCTATTTGTGCCAATAAATCAATATGCCTTGTTTCTAAGTCAATATATCCATCATTCCATGCTAATCAGTCACGACGTGCTGTTGTAAATCTAAGTGCCAATGCATCTTATTTCAAGCAGGGTCTACCAGTTTTGAAGTATGAACATCGGAGGGTTGGATTAAAATATCAGCATACACCAATTGTTTCCTTATACGGTAGCAAGGGAAAGGGCAGTGATGATGGGGTGAGAGCATTTCTTAATTGTTCGTTTGTGATCATTAGATTGTCTATTCGGCTCTATTCTTCTATATGTTTCTTTCTGATATAACTATTAGTAAATTTTATTTTCTGATGCTTTGCTCTACCTATAATACTCTGCTTGGGTTTCTTCTTTCTTCTTTCTTCTTTCTTCTTTTTCCTTTCCTTTTTTATTTTAAATTGTTATCTTTGACGTGTTAAAAGGGAAAAAAAGTTCATAATATGGTTTCTAATGTTCTCCGAATGATTGAAGGATTGGTGGAACTACGCTTCTCTGAGACTTCAGATTGTGTAACATGCTTCTTGAATTTCTCGTGTGTCATTTTCTGTTCCACTAAGCAACGGTGGATGGTCATGAAGTACATTTTAATTGCTGGAATTTTTCAAACTTGAGGAATTTAGAATGGCACTGTTAGTTCTGTTTTCCCACGAGTGTTGAATATTCATCAATATGCTTACTTTGCAAAAGTCAGCCATTGTAATCTTTTTTTTCATAAACCATTAAGGTTACTCCTTATGAAGATTGGAACATTTAACAAGAACATGTGTTTGGTTTGATATCAAGTGTCAACCATCTTTTTCACTCTTTATTTCATGAATGTTCCTCATGCTAGGAATTATTGTTGTTCATTCACTTTTCCAGAAAGTGAGCAAGTTTGTTTTCCCCCCCTAATTTCCTTTTTTGGTTCAAGTTGCTTGATATTCAATACACAATGGTAGGAGGATTTGGAGCGTTTATTCATTTAACCACTATTATGTTCATGTCCCTATTTTTGAATTTCAAATGTGCAAATGATAACCTTGGAGTTTGACGAGTTTCTATTTGTTTAAGAGGTATCTGTTAATCTAGATATAGTAATAGTACTTTGTTTCTAGCAGGGTTCTCCATGGAAAGGTTTGGACAAAGTTGTTGAAAGTTTTAAGGGACGATCAGTAGAAGATGTCTTGCGACAACAAATTGAAAAGAAAGAGTTCTATGATGGTGGAGATGGTGGCAAAAGACCTCCAGGTGGCGGCGGCGGCAGTGGTGGTGGCGACAGCGGTGATGGTGGCGAGGATAGCTCTAGTGGATCTGAGGATTATAGTCTCACAGGAATTATGGATGAAATACTGCAAGTCATTCTGGCGACCCTCGGCTTAGTTTTCGTAGTAATATACTCATTTAACATTTTCTATTGGAAATGGCATTTCAATCAGTCTTAAAAAGTTACAACTAACCAAACAGAAAGTAGAGGAATTCACTGGTAAAAAAAGTCTCGAGTTAGCTTAATAGTACATATTTCGATGTAGGGCCTGATAACAAGGAGATTTCCTAGACTTGATATTTATAGTTAACTACTAGATCTACTGTTTTGACTCCATAAAGCCTTTGATGAAGAAAATAACTGGCCTTCATATATTCAGGACTAGTAAAGTTAAACTCTAGATGTGAGCCAACAAAGTCAACCTTCACGAAATTGGATGGTAATGCTGTAAAAACCGCAACCTTTTCTCCTTTTGCTCTCTCTGTTGTCAAGTTAAGAGAAAACACAATATTCATAACTCAGAAAGCTGGAAAGGAATAAGAGTATGTACCATGAAAATCATGTTTATTTGAATACATATCTTGACATTGAATATGTACTAAATGAGGAAATTTTTTAAACATGATTGTTGGTTGTGTACTTGGGACAAGTTAATTAGTTACAAAGCTTGGCTTATGTTTTCTTGTTTGTGGTGGGCAGTACATTTATATACTCAGTGGGGAAGAGCTATCGCGATTAGCGAAGGATTACATAAAGTATCTATTTGGAGGAAGCAAGAGTGTGCGTTTGAAGCGAGCGATGTACAACTGGGGAAAGTTTTACCAAAGCCTCATGAAAAAGAAGAAATATGATCAATATTGGCTGGAGAAAGCTATTCTTAGCACTCCAACATGGTGGGATAATCCTGATAAGTATATGCCTAAGAAGGCACAGAATCAGAAACAGAATGTTGCATCAGATGATTATGATGAAACCGATTACCTAGACTCTGATTATGGTGAAATTGATTTCTAAAGTCTGATTATGGTGAAATCGATTAAGTAAAGTCTGATGATGAGGAATTCTGAATCCTTCTGCTTTTCTGTAAACCAACCTGATGTGTCTTTTTCTGCTGTCAATTTTTGTTTTCTGAGATGCTAAATTTGATATGTTATGTTGTAGGATCTTGGTGGACTGATGTACATAACATGAGATTTTGTCACTTTTTATAATGTTCTTAGTTATGTGATCTCAAAGTCTTTCTGGTGATTGGAAGCGACTTAGTCCCAATGACCATAAATCTTAGAGGCATGGGCAAGTAGTAGAGTTTGTATAGTCAAGCATGAAATTAATTTTTTTAATTGTGGAGCTCACAAATTCCTTGGCCCAAAGAGGAGCTCTCAACTCCATTATCTTCCCTAACAACTTTGAAATCTAG GAAGGAAGGGAATTGGTGAAATTGAGCATAGTTGTGAGTTAGCCCAATTATTACTCTCTCATAACCTAAAAAGCCCATTTCTCTATCAGTCCATTGCCACCTACCGATGCTCATTATCCCTTCTTCCTTCTCCGCAACAACCTCCACCGCCACACCCCCATTCCACCGTCATTCACTCGCCGACACGCACCACTACCCACCACATTCCCTCATCTTCCGCCCAGGGTGCTGGAGTGTGGCATATGACCATAGGGTGTTTATCAAAGGATGAGCAGCATGCAGATAACTGCTACACAGAATTCTATTTGTGCCAATAAATCAATATGCCTTGTTTCTAAGTCAATATATCCATCATTCCATGCTAATCAGTCACGACGTGCTGTTGTAAATCTAAGTGCCAATGCATCTTATTTCAAGCAGGGTCTACCAGTTTTGAAGTATGAACATCGGAGGGTTGGATTAAAATATCAGCATACACCAATTGTTTCCTTATACGGTAGCAAGGGAAAGGGCAGTGATGATGGGGGTTCTCCATGGAAAGGTTTGGACAAAGTTGTTGAAAGTTTTAAGGGACGATCAGTAGAAGATGTCTTGCGACAACAAATTGAAAAGAAAGAGTTCTATGATGGTGGAGATGGTGGCAAAAGACCTCCAGGTGGCGGCGGCGGCAGTGGTGGTGGCGACAGCGGTGATGGTGGCGAGGATAGCTCTAGTGGATCTGAGGATTATAGTCTCACAGGAATTATGGATGAAATACTGCAAGTCATTCTGGCGACCCTCGGCTTAGTTTTCGTATACATTTATATACTCAGTGGGGAAGAGCTATCGCGATTAGCGAAGGATTACATAAAGTATCTATTTGGAGGAAGCAAGAGTGTGCGTTTGAAGCGAGCGATGTACAACTGGGGAAAGTTTTACCAAAGCCTCATGAAAAAGAAGAAATATGATCAATATTGGCTGGAGAAAGCTATTCTTAGCACTCCAACATGGTGGGATAATCCTGATAAGTATATGCCTAAGAAGGCACAGAATCAGAAACAGAATGTTGCATCAGATGATTATGATGAAACCGATTACCTAGACTCTGATTATGGTGAAATTGATTTCTAAAGTCTGATTATGGTGAAATCGATTAAGTAAAGTCTGATGATGAGGAATTCTGAATCCTTCTGCTTTTCTGTAAACCAACCTGATGTGTCTTTTTCTGCTGTCAATTTTTGTTTTCTGAGATGCTAAATTTGATATGTTATGTTGTAGGATCTTGGTGGACTGATGTACATAACATGAGATTTTGTCACTTTTTATAATGTTCTTAGTTATGTGATCTCAAAGTCTTTCTGGTGATTGGAAGCGACTTAGTCCCAATGACCATAAATCTTAGAGGCATGGGCAAGTAGTAGAGTTTGTATAGTCAAGCATGAAATTAATTTTTTTAATTGTGGAGCTCACAAATTCCTTGGCCCAAAGAGGAGCTCTCAACTCCATTATCTTCCCTAACAACTTTGAAATCTAG ATGAGCAGCATGCAGATAACTGCTACACAGAATTCTATTTGTGCCAATAAATCAATATGCCTTGTTTCTAAGTCAATATATCCATCATTCCATGCTAATCAGTCACGACGTGCTGTTGTAAATCTAAGTGCCAATGCATCTTATTTCAAGCAGGGTCTACCAGTTTTGAAGTATGAACATCGGAGGGTTGGATTAAAATATCAGCATACACCAATTGTTTCCTTATACGGTAGCAAGGGAAAGGGCAGTGATGATGGGGGTTCTCCATGGAAAGGTTTGGACAAAGTTGTTGAAAGTTTTAAGGGACGATCAGTAGAAGATGTCTTGCGACAACAAATTGAAAAGAAAGAGTTCTATGATGGTGGAGATGGTGGCAAAAGACCTCCAGGTGGCGGCGGCGGCAGTGGTGGTGGCGACAGCGGTGATGGTGGCGAGGATAGCTCTAGTGGATCTGAGGATTATAGTCTCACAGGAATTATGGATGAAATACTGCAAGTCATTCTGGCGACCCTCGGCTTAGTTTTCGTATACATTTATATACTCAGTGGGGAAGAGCTATCGCGATTAGCGAAGGATTACATAAAGTATCTATTTGGAGGAAGCAAGAGTGTGCGTTTGAAGCGAGCGATGTACAACTGGGGAAAGTTTTACCAAAGCCTCATGAAAAAGAAGAAATATGATCAATATTGGCTGGAGAAAGCTATTCTTAGCACTCCAACATGGTGGGATAATCCTGATAAGTATATGCCTAAGAAGGCACAGAATCAGAAACAGAATGTTGCATCAGATGATTATGATGAAACCGATTACCTAGACTCTGATTATGGTGAAATTGATTTCTAA MSSMQITATQNSICANKSICLVSKSIYPSFHANQSRRAVVNLSANASYFKQGLPVLKYEHRRVGLKYQHTPIVSLYGSKGKGSDDGGSPWKGLDKVVESFKGRSVEDVLRQQIEKKEFYDGGDGGKRPPGGGGGSGGGDSGDGGEDSSSGSEDYSLTGIMDEILQVILATLGLVFVYIYILSGEELSRLAKDYIKYLFGGSKSVRLKRAMYNWGKFYQSLMKKKKYDQYWLEKAILSTPTWWDNPDKYMPKKAQNQKQNVASDDYDETDYLDSDYGEIDF
BLAST of CsGy1G023950 vs. NCBI nr
Match: XP_004145228.1 (PREDICTED: uncharacterized protein LOC101222813 [Cucumis sativus] >KGN65868.1 hypothetical protein Csa_1G534740 [Cucumis sativus]) HSP 1 Score: 462.2 bits (1188), Expect = 1.2e-126 Identity = 280/280 (100.00%), Postives = 280/280 (100.00%), Query Frame = 0
BLAST of CsGy1G023950 vs. NCBI nr
Match: XP_008444591.1 (PREDICTED: uncharacterized protein LOC103487859 [Cucumis melo]) HSP 1 Score: 342.8 bits (878), Expect = 1.1e-90 Identity = 219/277 (79.06%), Postives = 243/277 (87.73%), Query Frame = 0
BLAST of CsGy1G023950 vs. NCBI nr
Match: XP_022140099.1 (uncharacterized protein LOC111010834 [Momordica charantia]) HSP 1 Score: 315.1 bits (806), Expect = 2.4e-82 Identity = 202/282 (71.63%), Postives = 231/282 (81.91%), Query Frame = 0
BLAST of CsGy1G023950 vs. NCBI nr
Match: XP_022955156.1 (uncharacterized protein LOC111457207 [Cucurbita moschata]) HSP 1 Score: 283.9 bits (725), Expect = 6.0e-73 Identity = 180/249 (72.29%), Postives = 206/249 (82.73%), Query Frame = 0
BLAST of CsGy1G023950 vs. NCBI nr
Match: XP_023542514.1 (uncharacterized protein LOC111802398 [Cucurbita pepo subsp. pepo]) HSP 1 Score: 282.3 bits (721), Expect = 1.7e-72 Identity = 177/249 (71.08%), Postives = 204/249 (81.93%), Query Frame = 0
BLAST of CsGy1G023950 vs. TAIR10
Match: AT2G43630.1 (FUNCTIONS IN: molecular_function unknown) HSP 1 Score: 142.1 bits (357), Expect = 5.1e-34 Identity = 118/231 (51.08%), Postives = 156/231 (67.53%), Query Frame = 0
BLAST of CsGy1G023950 vs. TAIR10
Match: AT3G59640.1 (glycine-rich protein) HSP 1 Score: 104.8 bits (260), Expect = 9.1e-23 Identity = 97/239 (40.59%), Postives = 137/239 (57.32%), Query Frame = 0
BLAST of CsGy1G023950 vs. TrEMBL
Match: tr|A0A0A0LVP5|A0A0A0LVP5_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_1G534740 PE=4 SV=1) HSP 1 Score: 462.2 bits (1188), Expect = 8.1e-127 Identity = 280/280 (100.00%), Postives = 280/280 (100.00%), Query Frame = 0
BLAST of CsGy1G023950 vs. TrEMBL
Match: tr|A0A1S3BA69|A0A1S3BA69_CUCME (uncharacterized protein LOC103487859 OS=Cucumis melo OX=3656 GN=LOC103487859 PE=4 SV=1) HSP 1 Score: 342.8 bits (878), Expect = 7.2e-91 Identity = 219/277 (79.06%), Postives = 243/277 (87.73%), Query Frame = 0
BLAST of CsGy1G023950 vs. TrEMBL
Match: tr|A0A2P4KWK7|A0A2P4KWK7_QUESU (Uncharacterized protein OS=Quercus suber OX=58331 GN=CFP56_31071 PE=4 SV=1) HSP 1 Score: 189.9 bits (481), Expect = 7.8e-45 Identity = 142/252 (56.35%), Postives = 174/252 (69.05%), Query Frame = 0
BLAST of CsGy1G023950 vs. TrEMBL
Match: tr|A0A251R0R7|A0A251R0R7_PRUPE (Uncharacterized protein OS=Prunus persica OX=3760 GN=PRUPE_1G205800 PE=4 SV=1) HSP 1 Score: 188.0 bits (476), Expect = 3.0e-44 Identity = 143/261 (54.79%), Postives = 181/261 (69.35%), Query Frame = 0
BLAST of CsGy1G023950 vs. TrEMBL
Match: tr|A0A2P6QUA4|A0A2P6QUA4_ROSCH (Uncharacterized protein OS=Rosa chinensis OX=74649 GN=RchiOBHm_Chr4g0406201 PE=4 SV=1) HSP 1 Score: 182.2 bits (461), Expect = 1.6e-42 Identity = 146/254 (57.48%), Postives = 183/254 (72.05%), Query Frame = 0
The following BLAST results are available for this feature:
GO Assignments
This gene is annotated with the following GO terms.
The following mRNA feature(s) are a part of this gene:
Analysis Name: InterPro Annotations of cucumber Gy14 genome (v2)
Date Performed: 2018-09-25
The following gene(s) are orthologous to this gene:
The following gene(s) are paralogous to this gene: None The following block(s) are covering this gene:
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