CSPI01G24490 (gene) Wild cucumber (PI 183967)

Overview
NameCSPI01G24490
Typegene
OrganismCucumis sativus (Wild cucumber (PI 183967))
DescriptionGlycine-rich family protein
LocationChr1 : 19805868 .. 19809085 (-)
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
GAATTGGTGAAATTGAGCATAGTTGTGTGTTAGCCCAATTATTACTCTCTCATAACCTAAAAAGCCCATTTCTCTATCAGTCCATTGCCACCTACCGATGCTCATTATCCCTTCTTCCTTGTCCGCAACAACCTCCACCGCCACACCCCCATTTCACCGTCATTCACTCGCCGACACGCACCACTACCCACCACATTCCCTCCTCTTCCGCCCAGGTTATCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCAGTCTCAGTCTCTGGTTTCTAAGCCTTTTCTTTTCCTTTCTATTCTCTTTTCTTTCATCGATTCGACCAATTCGATAACTGGGTACTTTTGGAATGATCAACTGATTAAAATTACACTTGTATAGCCTCTACTTAAGCTTTTGAATTTAGGGTAGATATTACAAAAATATGGCTCTATGCGATTATGAATAGCTATTTTATCTGGTTATGTCTGGTAATTGTTATGATTCATACATGATATGAGAACTTGGATGTCAGGGTGCTGGAGTGTGGCATATGACCATAGGGTGTTTATCAAAGGATGAGCAGCATGCAGATAACTGCTACACGGAATTCTATTTGTGCCAATAAATCAATATGCCTTGTTTCTAAGTCAATATATCCATCATTCCATGCTAATCAGTCACGACGTGCTGTTGTGAATCTAAGTGCCAATGCATCTTATTTCAAGCAGGGTCTACCAGTTTTGAAGTATGAACATCGGAGGGTTGGATTAAAATATCAGCATACACCAATTGTTTCCTTATACGGTAGCAAGGGAAAGGGCAGTGATGATGGGGTGAGAGCATTTCTTAATTGTTCGTTTGTGATCATTAGATTGTCTATTCTGCTCTATTCTTCTATATGTTTCTTTCTGATATAACTATTAGTAAATTTTATTTTCTGATGCTTTGCTCTACCTAAAATACTCTGCTTGGGTTTCTTCTTTCTTCTTTCTTCTTTCTTCTTTTTCCTTTCCTTTTTTATTTTAAATTGTTATCTTTGACGTGTTAAAAGGGAAAAAAAGTTCATAATATGGTTTCTAATGTTCTCCGAATGATTGAAGGATTGGTGGAACTACGCTTCTCTGAGACTTCAGATTGTGTAACATGCTTCTTGAATTTCTCGTGTGTCATTTTCTGTTCCACTAAGCAACGGTGGATGGTCATGAAGTACATTTTAATTGCTGGAATTTTTCAAACTTGAGGAATTTAGAATGGCACTGTTAGTTCTGTTTTCCCACGAGTGTTGAATATTCATCAATATGCTTACTTTGCAAAAGTCAGCCATTGTAATCTTTTTTTTCATAAACCATTAAGGTTACTCCTTATGAAGATTGGAACATTTAACAAGAACATGTGTTTGGTTTGATATCAAGTGTCAACCATCTTTTTCACTCTTTATTTCATGAATGTTCCTCATGCTAGGAATTATTGTTGTTCATTCACTTTTCCAGAAAGTGAGCAAGTTTGTTTTCCCCCCCTAATTTCCTTTTTTGGTTCAAGTTGCTTGATATTCAATACACAATGGTAGGAGGATTTGGAGCGTTTATTCATTTAACCACTATTATGTTCATGTCCCTATTTTTGAATTTCAAATGTGCAAATGATAACCTTTGGAGTTTGACGAGTTTCTATTTGTTTAAGAGGTATCTGTTAATCTAGATATAGTAATAGTACTTTGTTTCTAGCAGGGTTCTCCATGGAAAGGTTTCGACAAAGTTGTTGAAAGTTTTAAGGGACGATCAGTAGAAGATGTCTTGCGACAACAAATTGAAAAGAAAGAGTTCTATGATGGTGGAGATGGTGGCAAAAGACCTCCAGGTGGCGGCGGCGGCAGTGGTGGTGGCGACAGCGGTGATGGTGGCGAGGATAGCTCTAGTGGATCTGAGGATTATAGTCTCACAGGAATTATGGATGAAATACTGCAAGTCATTCTGGCGACCCTCGGCTTAGTTTTCGTAGTAATATACTCATTTAACATTTTCTATTGGAAATGGCATTTCAATCAGTCTTAAAAAGTTACAACTAACCAAACAGAAAGTAGAGGAATTCACTGGTAAAAAAAGTCTCGAGTTAGCTTAATAGTACATATTTCGATGTAGGGCCTGATAACAAGGAGATTTCCTAGACTTGATATTTATAGTTAACTACTAGATCTACTGTTTTGACTCCATAAAGCATTTGATGAAGAAAATAACTGGCCTTCATATATTCAGGACTAGTAAAGTTAAACTCTAGATGTGAGCCAACAAAGTCAACCTTCACGAAATTGGATGGTAATGCTGTAAAAACCGCAACCTTTTCTCCTTTTGCTCTCTCTGTTGTCAAGTTAAGAGAAAACACAATATTCATAACTCAGAAAGCTGGAAAGGAATAAGAGTATGTACCATGAAAATCATGTTTATTTGAATACATATCTTGACATTGAATATGTACTAAATGAGGAAATTTTTTAAACATGATTGTTGGTTGTGTACTTGGGACAAGTTAATTAGTTACAAAGCTTGGCTTATGTTTTCTTGTTTGTGGTGGGCAGTACATTTATATACTCAGTGGGGAAGAGCTATCGCGATTAGCGAAGGATTACATAAAGTATCTATTTGGAGGAAGCAAGAGTGTGCGTTTGAAGCGAGCGATGTACAACTGGGGAAAGTTTTACCAAAGCCTCATGAAAAAGAAGAAATATGATCAATATTGGCTGGAGAAAGCTATTCTTAGCACTCCAACATGGTGGGATAATCCTGATAAGTATATGCCTAAGAAGGCACAGAATCAGAAACAGAATGTTGCATCAGATGATTATGATGAAACCGATTACCTAGACTCTGATTATGGTGAAATTGATTTCTAAAGTCTGATTATGGTGAAATCGATTAAGTAAAGTCTGATGATGAGGAATTCTGAATCCTTCTGCTTTTCTGTAAACCAACCTGATGTGTCTTTTTCTGCTGTCAATTTTTGTTTTCTGAGATGCTAAATTTGATATGTTATGTTGTAGGATCTTGGTGGACTGATGTACATAACATGAGATTTTGTCACTTTTTATAATTTTCTTAGTTATGTGATCTCAAAGTCTTTCTGGTGATTGGAAGCGACTTAGTCCCAATGACCATAAATCTTAGAGGCATGGGCAAGTAGTAGAGTTTGTATAGTCAAGCATGAAATTAATTTTTTTAATTGTGGAGCTCACAAATTCCTTGGCCCA

mRNA sequence

ATGAGCAGCATGCAGATAACTGCTACACGGAATTCTATTTGTGCCAATAAATCAATATGCCTTGTTTCTAAGTCAATATATCCATCATTCCATGCTAATCAGTCACGACGTGCTGTTGTGAATCTAAGTGCCAATGCATCTTATTTCAAGCAGGGTCTACCAGTTTTGAAGTATGAACATCGGAGGGTTGGATTAAAATATCAGCATACACCAATTGTTTCCTTATACGGTAGCAAGGGAAAGGGCAGTGATGATGGGGGTTCTCCATGGAAAGGTTTCGACAAAGTTGTTGAAAGTTTTAAGGGACGATCAGTAGAAGATGTCTTGCGACAACAAATTGAAAAGAAAGAGTTCTATGATGGTGGAGATGGTGGCAAAAGACCTCCAGGTGGCGGCGGCGGCAGTGGTGGTGGCGACAGCGGTGATGGTGGCGAGGATAGCTCTAGTGGATCTGAGGATTATAGTCTCACAGGAATTATGGATGAAATACTGCAAGTCATTCTGGCGACCCTCGGCTTAGTTTTCGTATACATTTATATACTCAGTGGGGAAGAGCTATCGCGATTAGCGAAGGATTACATAAAGTATCTATTTGGAGGAAGCAAGAGTGTGCGTTTGAAGCGAGCGATGTACAACTGGGGAAAGTTTTACCAAAGCCTCATGAAAAAGAAGAAATATGATCAATATTGGCTGGAGAAAGCTATTCTTAGCACTCCAACATGGTGGGATAATCCTGATAAGTATATGCCTAAGAAGGCACAGAATCAGAAACAGAATGTTGCATCAGATGATTATGATGAAACCGATTACCTAGACTCTGATTATGGTGAAATTGATTTCTAA

Coding sequence (CDS)

ATGAGCAGCATGCAGATAACTGCTACACGGAATTCTATTTGTGCCAATAAATCAATATGCCTTGTTTCTAAGTCAATATATCCATCATTCCATGCTAATCAGTCACGACGTGCTGTTGTGAATCTAAGTGCCAATGCATCTTATTTCAAGCAGGGTCTACCAGTTTTGAAGTATGAACATCGGAGGGTTGGATTAAAATATCAGCATACACCAATTGTTTCCTTATACGGTAGCAAGGGAAAGGGCAGTGATGATGGGGGTTCTCCATGGAAAGGTTTCGACAAAGTTGTTGAAAGTTTTAAGGGACGATCAGTAGAAGATGTCTTGCGACAACAAATTGAAAAGAAAGAGTTCTATGATGGTGGAGATGGTGGCAAAAGACCTCCAGGTGGCGGCGGCGGCAGTGGTGGTGGCGACAGCGGTGATGGTGGCGAGGATAGCTCTAGTGGATCTGAGGATTATAGTCTCACAGGAATTATGGATGAAATACTGCAAGTCATTCTGGCGACCCTCGGCTTAGTTTTCGTATACATTTATATACTCAGTGGGGAAGAGCTATCGCGATTAGCGAAGGATTACATAAAGTATCTATTTGGAGGAAGCAAGAGTGTGCGTTTGAAGCGAGCGATGTACAACTGGGGAAAGTTTTACCAAAGCCTCATGAAAAAGAAGAAATATGATCAATATTGGCTGGAGAAAGCTATTCTTAGCACTCCAACATGGTGGGATAATCCTGATAAGTATATGCCTAAGAAGGCACAGAATCAGAAACAGAATGTTGCATCAGATGATTATGATGAAACCGATTACCTAGACTCTGATTATGGTGAAATTGATTTCTAA
Homology
[Close]
BLAST of CSPI01G24490 vs. TrEMBL
Match: A0A0A0LVP5_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_1G534740 PE=4 SV=1)

HSP 1 Score: 541.2 bits (1393), Expect = 7.5e-151
Identity = 278/280 (99.29%), Postives = 279/280 (99.64%), Query Frame = 1 

Query: 1   MSSMQITATRNSICANKSICLVSKSIYPSFHANQSRRAVVNLSANASYFKQGLPVLKYEH 60
           MSSMQITAT+NSICANKSICLVSKSIYPSFHANQSRRAVVNLSANASYFKQGLPVLKYEH
Sbjct: 1   MSSMQITATQNSICANKSICLVSKSIYPSFHANQSRRAVVNLSANASYFKQGLPVLKYEH 60

Query: 61  RRVGLKYQHTPIVSLYGSKGKGSDDGGSPWKGFDKVVESFKGRSVEDVLRQQIEKKEFYD 120
           RRVGLKYQHTPIVSLYGSKGKGSDDGGSPWKG DKVVESFKGRSVEDVLRQQIEKKEFYD
Sbjct: 61  RRVGLKYQHTPIVSLYGSKGKGSDDGGSPWKGLDKVVESFKGRSVEDVLRQQIEKKEFYD 120

Query: 121 GGDGGKRPPGGGGGSGGGDSGDGGEDSSSGSEDYSLTGIMDEILQVILATLGLVFVYIYI 180
           GGDGGKRPPGGGGGSGGGDSGDGGEDSSSGSEDYSLTGIMDEILQVILATLGLVFVYIYI
Sbjct: 121 GGDGGKRPPGGGGGSGGGDSGDGGEDSSSGSEDYSLTGIMDEILQVILATLGLVFVYIYI 180

Query: 181 LSGEELSRLAKDYIKYLFGGSKSVRLKRAMYNWGKFYQSLMKKKKYDQYWLEKAILSTPT 240
           LSGEELSRLAKDYIKYLFGGSKSVRLKRAMYNWGKFYQSLMKKKKYDQYWLEKAILSTPT
Sbjct: 181 LSGEELSRLAKDYIKYLFGGSKSVRLKRAMYNWGKFYQSLMKKKKYDQYWLEKAILSTPT 240

Query: 241 WWDNPDKYMPKKAQNQKQNVASDDYDETDYLDSDYGEIDF 281
           WWDNPDKYMPKKAQNQKQNVASDDYDETDYLDSDYGEIDF
Sbjct: 241 WWDNPDKYMPKKAQNQKQNVASDDYDETDYLDSDYGEIDF 280

[Close]
BLAST of CSPI01G24490 vs. TrEMBL
Match: A0A061GV93_THECC (Chloroplast, nucleus, chloroplast envelope, putative OS=Theobroma cacao GN=TCM_041392 PE=4 SV=1)

HSP 1 Score: 212.6 bits (540), Expect = 6.1e-52
Identity = 123/228 (53.95%), Postives = 163/228 (71.49%), Query Frame = 1 

Query: 50  KQGLPVLKYE-HRRVGLKYQHTPIVSLYGSKGKGSDDGGSPWKGFDKVVESF-KGRSVED 109
           +Q  P+LK++ +  +    Q TP+  L G      D+ GSPWK  +K + +F K +SVED
Sbjct: 54  QQFAPLLKHKRYASLSKCRQGTPLCRLGGEDKSAGDNEGSPWKAIEKAIGNFRKEQSVED 113

Query: 110 VLRQQIEKKEFYDGGDGGKRPPGGGGGSGGGDSGDGGEDSSSGSEDYSLTGIMDEILQVI 169
           VLRQQI+K+E+YD G G K PP GGGG+GGG  G GG      SED  L+GI+DE LQVI
Sbjct: 114 VLRQQIQKQEYYDEGSG-KYPPRGGGGNGGGGDGSGG------SEDEGLSGILDETLQVI 173

Query: 170 LATLGLVFVYIYILSGEELSRLAKDYIKYLFGGSKSVRLKRAMYNWGKFYQSLMKKKKYD 229
           LAT+G +F+Y+YI++GEEL+RLAKDYIK+LFGG+KSVRL+ AMY W KF++ L +KK+YD
Sbjct: 174 LATIGFIFLYVYIITGEELARLAKDYIKFLFGGNKSVRLRHAMYKWRKFFEKLTEKKEYD 233

Query: 230 QYWLEKAILSTPTWWDNPDKYMPKKAQNQKQNVASDDYDETDYLDSDY 276
           QYWLEKAI++TPTW+D P KY  ++  N    + SDD D+ D  D +Y
Sbjct: 234 QYWLEKAIITTPTWYDIPGKY--RRVLN--SYLESDDDDDDDDDDDEY 270

[Close]
BLAST of CSPI01G24490 vs. TrEMBL
Match: W9R3D7_9ROSA (Uncharacterized protein OS=Morus notabilis GN=L484_018130 PE=4 SV=1)

HSP 1 Score: 211.8 bits (538), Expect = 1.0e-51
Identity = 132/290 (45.52%), Postives = 180/290 (62.07%), Query Frame = 1 

Query: 1   MSSMQITAT--RNSICANKSICLVSKSIYPS---FHANQSRRAVVNLSANASYFKQGLPV 60
           M++ QI+A   R +IC   +     + + PS   F+  Q  +  + LS++        PV
Sbjct: 1   MNTAQISACQPRTAICGRNAFGFQLRKLKPSNLGFYGRQVPKTCLKLSSHGHGRLFCAPV 60

Query: 61  LKYEHRRVGLKYQHTPIVSLYGSKGKGSDDGGSPWKGFDKVVESFKGRSVEDVLRQQIEK 120
           LK          + + +V L  SK  G ++ GSPWK F+K + + KG+S+EDVLRQQIEK
Sbjct: 61  LKS---------RRSSLVCL--SKTGGDNEEGSPWKAFEKAMGNLKGQSIEDVLRQQIEK 120

Query: 121 KEFYDGGDGGKRPPGGGGGSGGGDSGDGGEDSSSGSEDYSLTGIMDEILQVILATLGLVF 180
            EF    DGG  PP GG G GGG     G D S GSED  L+G++DE LQV+LAT+G + 
Sbjct: 121 GEFATDRDGGGGPPSGGSGGGGG-----GADGSGGSEDEGLSGVLDETLQVVLATVGFIL 180

Query: 181 VYIYILSGEELSRLAKDYIKYLFGGSKSVRLKRAMYNWGKFYQSLMKKKKYDQYWLEKAI 240
           +YIYI+SGEEL +LAKDY+KY F G++SVRLKRAMY W +F+Q L +KK+YD YWLEK I
Sbjct: 181 LYIYIISGEELIKLAKDYLKYFFKGTESVRLKRAMYQWRRFFQKLTEKKEYDPYWLEKEI 240

Query: 241 LSTPTWWDNPDKY--MPKKAQNQKQNVASDDYDETDYLDS---DYGEIDF 281
           ++TPTWWD+P+KY  + + +         D Y+E++  DS    Y E DF
Sbjct: 241 INTPTWWDSPEKYRHILRPSTPSTSKSPPDSYEESNSFDSYEESYREDDF 274

[Close]
BLAST of CSPI01G24490 vs. TrEMBL
Match: A0A0D2W9I6_GOSRA (Uncharacterized protein OS=Gossypium raimondii GN=B456_013G257700 PE=4 SV=1)

HSP 1 Score: 211.1 bits (536), Expect = 1.8e-51
Identity = 124/227 (54.63%), Postives = 159/227 (70.04%), Query Frame = 1 

Query: 50  KQGLPVLKYEHRR---VGLKYQHTPIVSLYGSKGKGSDDGGSPWKGFDKVVESF-KGRSV 109
           +Q  P+LK  H+R   V    Q T I    G      D+ GSPWK  +K + +F K +S+
Sbjct: 55  QQFAPLLK--HKRCVSVSKCRQGTTICKFGGQDKPAGDNEGSPWKSIEKAIGNFGKKQSI 114

Query: 110 EDVLRQQIEKKEFYDGGDGGKRPPGGGGGSGGGDSGDGGEDSSSGSEDYSLTGIMDEILQ 169
           EDVLRQQIEK+++YD G G   P GGGGGS GG  G G       SED  L+GI+DE +Q
Sbjct: 115 EDVLRQQIEKQDYYDEGSGQNPPRGGGGGSSGGGDGFGE------SEDEGLSGILDETVQ 174

Query: 170 VILATLGLVFVYIYILSGEELSRLAKDYIKYLFGGSKSVRLKRAMYNWGKFYQSLMKKKK 229
           VILATLG +F+Y+YI++GEEL+RLAKDYIKYLFGGSKSVRLKR MY W KF++ L +KK+
Sbjct: 175 VILATLGFIFLYVYIITGEELARLAKDYIKYLFGGSKSVRLKRTMYKWSKFFEKLTEKKE 234

Query: 230 YDQYWLEKAILSTPTWWDNPDKYMPKKAQNQKQNVASDDYDETDYLD 273
           YD++WLEKAI++TPTW+D+PDKY  ++  N    +  DD DE+DY D
Sbjct: 235 YDKFWLEKAIITTPTWYDSPDKY--RRVLN--SYIEYDDEDESDYDD 269

[Close]
BLAST of CSPI01G24490 vs. TrEMBL
Match: A0A059DE39_EUCGR (Uncharacterized protein OS=Eucalyptus grandis GN=EUGRSUZ_A01325 PE=4 SV=1)

HSP 1 Score: 210.7 bits (535), Expect = 2.3e-51
Identity = 120/220 (54.55%), Postives = 156/220 (70.91%), Query Frame = 1 

Query: 32  ANQSRRAVVNLSANASYFKQGLPVLKYEHRRVGLKYQHTPIVSLYGS-KGKG-SDDGGSP 91
           AN+S    + LSA      Q +PV K+  R   L Y+    + L+G  KGK  S++ GS 
Sbjct: 38  ANRSSGTSLKLSAEKLVSPQFMPVPKHGPRLPVLSYRRLVPLGLFGGGKGKSDSENEGSA 97

Query: 92  WKGFDKVVESF-KGRSVEDVLRQQIEKKEFYDGGDGGKRPPGGGGGSGGGDSGDGGEDSS 151
           WK  +K + SF K  S+EDVLR+QIEK++FYD G  GK P GG GGSGG  SG G     
Sbjct: 98  WKSLEKAMGSFRKDPSIEDVLRKQIEKQDFYDDGGSGKGPTGGAGGSGGSGSGGG----F 157

Query: 152 SGSEDYSLTGIMDEILQVILATLGLVFVYIYILSGEELSRLAKDYIKYLFGGSKSVRLKR 211
            G++D    GIM+E LQV+LATLG +F+YIYI+SGEEL RLAKDY+KYLFGGS+SVRLKR
Sbjct: 158 GGTDDEGFAGIMEETLQVVLATLGFIFLYIYIISGEELFRLAKDYMKYLFGGSQSVRLKR 217

Query: 212 AMYNWGKFYQSLMKKKKYDQYWLEKAILSTPTWWDNPDKY 249
           A+Y WG+F + + +K++ D+YWLEKAI++TPTWWD+P+KY
Sbjct: 218 ALYQWGRFKKKMTEKEEVDKYWLEKAIINTPTWWDSPEKY 253

[Close]
BLAST of CSPI01G24490 vs. TAIR10
Match: AT2G43630.1 (AT2G43630.1 FUNCTIONS IN: molecular_function unknown)

HSP 1 Score: 179.1 bits (453), Expect = 3.8e-45
Identity = 112/263 (42.59%), Postives = 159/263 (60.46%), Query Frame = 1 

Query: 20  CLVSKSIYPSFHANQSRRAVVNLSANASYFKQGLPVLKYEHRRVGLKYQHTPIVSLYGSK 79
           C+ S  I  S   +   R    L A A+   Q  P+L +  R    K + +  V L+G K
Sbjct: 23  CISSVPIRSSVRFDHFPRTSFTLRATAAVSTQFSPLLDHRRRLPTGKSKQSSAVCLFGGK 82

Query: 80  GK--GSDDGGSPWKGFDKVVESFKGRSVEDVLRQQIEKKEFYDGGDGGKRPPGGGGGSGG 139
            K  GSD+  SPWK  +K +     +SVED+LR+QI+KK+FYD   GG  PP GGG  GG
Sbjct: 83  DKPDGSDEI-SPWKAIEKAMGK---KSVEDMLREQIQKKDFYDTDSGGNMPPRGGGSGGG 142

Query: 140 GDSGDGGEDSSSGSEDYSLTGIMDEILQVILATLGLVFVYIYILSGEELSRLAKDYIKYL 199
           G +G+      SG ED  L GI DE LQV+LATLG +F+Y YI++GEEL +LA+DYI++L
Sbjct: 143 GGNGE-ERPEGSGGEDGGLAGIADETLQVVLATLGFIFLYTYIITGEELVKLARDYIRFL 202

Query: 200 FGGSKSVRLKRAMYNWGKFYQSLMKKKKYDQYWLEKAILSTPTWWDNPDKYMPKKAQNQK 259
            G  K+VRL RAM +W  F + + +++ YD+YWLEKAI++TPTW+D+P+KY       + 
Sbjct: 203 MGRPKTVRLTRAMDSWNGFLEKMSRQRVYDEYWLEKAIINTPTWYDSPEKY------RRV 262

Query: 260 QNVASDDYDETDYLDSDYGEIDF 281
                D   +  Y++S+  E+ +
Sbjct: 263 IKAYVDSNSDEAYVESNSDEVSY 274

[Close]
BLAST of CSPI01G24490 vs. TAIR10
Match: AT3G59640.1 (AT3G59640.1 glycine-rich protein)

HSP 1 Score: 130.2 bits (326), Expect = 2.0e-30
Identity = 98/239 (41.00%), Postives = 137/239 (57.32%), Query Frame = 1 

Query: 1   MSSMQITATRNSI-CANKSICL-VSKSIYPS---FHANQSRRAVVNLSANASYFKQGLPV 60
           MSS Q    R S+ CA  +    VS + + S   F      +  +  SA++S   Q  P+
Sbjct: 1   MSSTQANLCRPSLFCARTTQTRHVSSAPFMSSLRFDYRPLPKLAIRASASSSMSSQFSPL 60

Query: 61  LKYEHRRVGLKYQHTPIVSLYGSKGK--GSDDGGSPWKGFDKVVESFKGRSVEDVLRQQI 120
             +  R      +  P+V L G K K  GS++  S W+  +K +     +SVED+LR+QI
Sbjct: 61  QNHRCRN----QRQGPVVCLLGGKDKSNGSNELSSTWEAIEKAMGK---KSVEDMLREQI 120

Query: 121 EKKEFYDGGDGGKRPPGGGGGSGGGDSGDGGEDSSSGSEDYSLTGIMDEILQVILATLGL 180
           +KK+      GG  P G GGG GG + G+ G   SSG ED  L    DE LQV+LATLG 
Sbjct: 121 QKKD-----TGGIPPRGRGGGGGGRNGGNNGSGGSSG-EDGGLASFGDETLQVVLATLGF 180

Query: 181 VFVYIYILSGEELSRLAKDYIKYLFGGSKSVRLKRAMYNWGKFYQSLMKKKKYDQYWLE 233
           +F+Y YI++GEEL RLA+DYI+YL G  KSVRL R M  W +F++ + +KK Y++YWL+
Sbjct: 181 IFLYFYIINGEELFRLARDYIRYLIGRPKSVRLTRVMEGWSRFFEKMSRKKVYNEYWLK 226

[Close]
BLAST of CSPI01G24490 vs. NCBI nr
Match: gi|449454973|ref|XP_004145228.1| (PREDICTED: uncharacterized protein LOC101222813 [Cucumis sativus])

HSP 1 Score: 541.2 bits (1393), Expect = 1.1e-150
Identity = 278/280 (99.29%), Postives = 279/280 (99.64%), Query Frame = 1 

Query: 1   MSSMQITATRNSICANKSICLVSKSIYPSFHANQSRRAVVNLSANASYFKQGLPVLKYEH 60
           MSSMQITAT+NSICANKSICLVSKSIYPSFHANQSRRAVVNLSANASYFKQGLPVLKYEH
Sbjct: 1   MSSMQITATQNSICANKSICLVSKSIYPSFHANQSRRAVVNLSANASYFKQGLPVLKYEH 60

Query: 61  RRVGLKYQHTPIVSLYGSKGKGSDDGGSPWKGFDKVVESFKGRSVEDVLRQQIEKKEFYD 120
           RRVGLKYQHTPIVSLYGSKGKGSDDGGSPWKG DKVVESFKGRSVEDVLRQQIEKKEFYD
Sbjct: 61  RRVGLKYQHTPIVSLYGSKGKGSDDGGSPWKGLDKVVESFKGRSVEDVLRQQIEKKEFYD 120

Query: 121 GGDGGKRPPGGGGGSGGGDSGDGGEDSSSGSEDYSLTGIMDEILQVILATLGLVFVYIYI 180
           GGDGGKRPPGGGGGSGGGDSGDGGEDSSSGSEDYSLTGIMDEILQVILATLGLVFVYIYI
Sbjct: 121 GGDGGKRPPGGGGGSGGGDSGDGGEDSSSGSEDYSLTGIMDEILQVILATLGLVFVYIYI 180

Query: 181 LSGEELSRLAKDYIKYLFGGSKSVRLKRAMYNWGKFYQSLMKKKKYDQYWLEKAILSTPT 240
           LSGEELSRLAKDYIKYLFGGSKSVRLKRAMYNWGKFYQSLMKKKKYDQYWLEKAILSTPT
Sbjct: 181 LSGEELSRLAKDYIKYLFGGSKSVRLKRAMYNWGKFYQSLMKKKKYDQYWLEKAILSTPT 240

Query: 241 WWDNPDKYMPKKAQNQKQNVASDDYDETDYLDSDYGEIDF 281
           WWDNPDKYMPKKAQNQKQNVASDDYDETDYLDSDYGEIDF
Sbjct: 241 WWDNPDKYMPKKAQNQKQNVASDDYDETDYLDSDYGEIDF 280

[Close]
BLAST of CSPI01G24490 vs. NCBI nr
Match: gi|659068470|ref|XP_008444591.1| (PREDICTED: uncharacterized protein LOC103487859 [Cucumis melo])

HSP 1 Score: 411.0 bits (1055), Expect = 1.7e-111
Identity = 214/277 (77.26%), Postives = 242/277 (87.36%), Query Frame = 1 

Query: 1   MSSMQITATRNSICANKSICLVSKSIYPSFHANQSRRAVVNLSANASYFKQGLPVLKYEH 60
           MSSMQITAT+NSICANKSICLVSKSIYPSFHANQS RAVVNLSANASYFKQGLP+LKY+H
Sbjct: 1   MSSMQITATQNSICANKSICLVSKSIYPSFHANQSLRAVVNLSANASYFKQGLPILKYKH 60

Query: 61  RRVGLKYQHTPIVSLYGSKGKGSDDGGSPWKGFDKVVESF-KGRSVEDVLRQQIEKKEFY 120
           RRVGLK+QHTPIVSL+GSKGKGSDDGGSPWK FDKVVESF KG SVEDVLR+QIEKKEFY
Sbjct: 61  RRVGLKHQHTPIVSLFGSKGKGSDDGGSPWKAFDKVVESFKKGGSVEDVLRKQIEKKEFY 120

Query: 121 DGGDGGKRPP--GGGGGSGGGDSGDGGEDSSSGSEDYSLTGIMDEILQVILATLGLVFVY 180
           DGGDGG+RPP  GGGGG GGG  G G EDSSSG++D+SL   +DE LQV+LATLG +F+Y
Sbjct: 121 DGGDGGRRPPSGGGGGGGGGGGGGSGSEDSSSGAKDFSLAEALDETLQVVLATLGFIFMY 180

Query: 181 IYILSGEELSRLAKDYIKYLFGGSKSVRLKRAMYNWGKFYQSLMKKKKYDQYWLEKAILS 240
            Y+L+GEE++RL KDYIKY FGGSKSVRL+RAMY WG+FYQ L  KKKYD++WLEKAI++
Sbjct: 181 FYLLNGEEVTRLLKDYIKYRFGGSKSVRLRRAMYEWGRFYQRLTAKKKYDEFWLEKAIIN 240

Query: 241 TPTWWDNPDKYMPK-----KAQNQKQNVASDDYDETD 270
           TPTWWD+PD Y        KA+NQ++N ASDD  ETD
Sbjct: 241 TPTWWDHPDNYRHAAMAYGKAENQEKNFASDDDGETD 277

[Close]
BLAST of CSPI01G24490 vs. NCBI nr
Match: gi|470148585|ref|XP_004309837.1| (PREDICTED: uncharacterized protein LOC101292863 [Fragaria vesca subsp. vesca])

HSP 1 Score: 222.6 bits (566), Expect = 8.5e-55
Identity = 133/253 (52.57%), Postives = 166/253 (65.61%), Query Frame = 1 

Query: 1   MSSMQITATRNSICANK---SICLVSKSIYPSFHANQSRRAVVNLSANASYFKQGLPVLK 60
           MS + I++   SIC      S+ L +K       A    R  +  +  A+  ++ + VLK
Sbjct: 1   MSIVPISSCNPSICLRHNSISLRLPTKPCILPIRAKHVLRNPLVATCKAAVQQRCMTVLK 60

Query: 61  YEHRRVGLKYQHTPIVSLYGSKGK-GSDDGGSPWKGFDKVVESFKGR-SVEDVLRQQIEK 120
               R     QH+  V L G KGK GSD+ GSPWK  +K + + K   S+EDVLRQQIEK
Sbjct: 61  NNRCRAASTSQHSLPVCLLGGKGKNGSDNEGSPWKSLEKAMGNLKKESSIEDVLRQQIEK 120

Query: 121 KEFYDGGDGGKRPPGGGGGSGGGDSGDGGEDSSSGSEDYSLTGIMDEILQVILATLGLVF 180
            EFY+  D G R  GG GG G G  G GG D S GSED    GI+DE LQVILAT+G +F
Sbjct: 121 NEFYEDKDSGTR-GGGSGGGGNGGGGGGGADPSGGSEDEGFAGIIDETLQVILATIGFIF 180

Query: 181 VYIYILSGEELSRLAKDYIKYLFGGSKSVRLKRAMYNWGKFYQSLMKKKKYDQYWLEKAI 240
           +Y+YI+ GEE +RLAKDY+KYLF GS+SVRL+RAMYNWG+FYQ L +KK YD+YWLEKAI
Sbjct: 181 LYVYIIDGEEWTRLAKDYLKYLFSGSESVRLRRAMYNWGRFYQKLTEKKVYDKYWLEKAI 240

Query: 241 LSTPTWWDNPDKY 249
           +STPTWWD+P KY
Sbjct: 241 ISTPTWWDSPAKY 252

[Close]
BLAST of CSPI01G24490 vs. NCBI nr
Match: gi|802554775|ref|XP_012065076.1| (PREDICTED: uncharacterized protein LOC105628287 [Jatropha curcas])

HSP 1 Score: 217.6 bits (553), Expect = 2.7e-53
Identity = 124/211 (58.77%), Postives = 155/211 (73.46%), Query Frame = 1 

Query: 40  VNLSANASYFKQGLPVLKYEHRRVGLKYQHTPIVSLYGSKGKGS-DDGGSPWKGFDKVVE 99
           + L++NA  F     V +++ R   +KYQ    V L G K K   D+GGS W  F+K+ E
Sbjct: 39  LKLASNALIFHHNGLVSRHQQRETVMKYQQRSPVCLLGGKDKSEKDNGGSGWNPFEKLTE 98

Query: 100 SFKGRSVEDVLRQQIEKKEFYDGGDGGKRPPGGGGGSGGGDSGDG-GEDSSSGSEDYSLT 159
           SFKG+S+EDVLRQQ+EK EFYDGG G K PP GGGGSGG  SGDG GE     SED  + 
Sbjct: 99  SFKGQSIEDVLRQQLEKGEFYDGGSG-KNPPRGGGGSGG--SGDGYGE-----SEDEGIA 158

Query: 160 GIMDEILQVILATLGLVFVYIYILSGEELSRLAKDYIKYLFGGSKSVRLKRAMYNWGKFY 219
           GI+DE LQV+LAT+G +F+Y+YI+SGEEL+RLAKDYIKYL  GSKSVRLKRAMY W +FY
Sbjct: 159 GIIDETLQVVLATIGFIFLYVYIISGEELTRLAKDYIKYLLRGSKSVRLKRAMYKWKRFY 218

Query: 220 QSLMKKKKYDQYWLEKAILSTPTWWDNPDKY 249
           Q L +KK+ D+ WLE+AI++TPT +D+P KY
Sbjct: 219 QKLTEKKEIDKMWLERAIINTPTIYDSPAKY 241

[Close]
BLAST of CSPI01G24490 vs. NCBI nr
Match: gi|590586778|ref|XP_007015797.1| (Chloroplast, nucleus, chloroplast envelope, putative [Theobroma cacao])

HSP 1 Score: 212.6 bits (540), Expect = 8.8e-52
Identity = 123/228 (53.95%), Postives = 163/228 (71.49%), Query Frame = 1 

Query: 50  KQGLPVLKYE-HRRVGLKYQHTPIVSLYGSKGKGSDDGGSPWKGFDKVVESF-KGRSVED 109
           +Q  P+LK++ +  +    Q TP+  L G      D+ GSPWK  +K + +F K +SVED
Sbjct: 54  QQFAPLLKHKRYASLSKCRQGTPLCRLGGEDKSAGDNEGSPWKAIEKAIGNFRKEQSVED 113

Query: 110 VLRQQIEKKEFYDGGDGGKRPPGGGGGSGGGDSGDGGEDSSSGSEDYSLTGIMDEILQVI 169
           VLRQQI+K+E+YD G G K PP GGGG+GGG  G GG      SED  L+GI+DE LQVI
Sbjct: 114 VLRQQIQKQEYYDEGSG-KYPPRGGGGNGGGGDGSGG------SEDEGLSGILDETLQVI 173

Query: 170 LATLGLVFVYIYILSGEELSRLAKDYIKYLFGGSKSVRLKRAMYNWGKFYQSLMKKKKYD 229
           LAT+G +F+Y+YI++GEEL+RLAKDYIK+LFGG+KSVRL+ AMY W KF++ L +KK+YD
Sbjct: 174 LATIGFIFLYVYIITGEELARLAKDYIKFLFGGNKSVRLRHAMYKWRKFFEKLTEKKEYD 233

Query: 230 QYWLEKAILSTPTWWDNPDKYMPKKAQNQKQNVASDDYDETDYLDSDY 276
           QYWLEKAI++TPTW+D P KY  ++  N    + SDD D+ D  D +Y
Sbjct: 234 QYWLEKAIITTPTWYDIPGKY--RRVLN--SYLESDDDDDDDDDDDEY 270

The following BLAST results are available for this feature:
BLAST of CSPI01G24490 vs. Swiss-Prot
Match NameE-valueIdentityDescription
BLAST of CSPI01G24490 vs. TrEMBL
Match NameE-valueIdentityDescription
A0A0A0LVP5_CUCSA7.5e-15199.29Uncharacterized protein OS=Cucumis sativus GN=Csa_1G534740 PE=4 SV=1[more]
A0A061GV93_THECC6.1e-5253.95Chloroplast, nucleus, chloroplast envelope, putative OS=Theobroma cacao GN=TCM_0... [more]
W9R3D7_9ROSA1.0e-5145.52Uncharacterized protein OS=Morus notabilis GN=L484_018130 PE=4 SV=1[more]
A0A0D2W9I6_GOSRA1.8e-5154.63Uncharacterized protein OS=Gossypium raimondii GN=B456_013G257700 PE=4 SV=1[more]
A0A059DE39_EUCGR2.3e-5154.55Uncharacterized protein OS=Eucalyptus grandis GN=EUGRSUZ_A01325 PE=4 SV=1[more]
BLAST of CSPI01G24490 vs. TAIR10
Match NameE-valueIdentityDescription
AT2G43630.13.8e-4542.59 FUNCTIONS IN: molecular_function unknown[more]
AT3G59640.12.0e-3041.00 glycine-rich protein[more]
BLAST of CSPI01G24490 vs. NCBI nr
Match NameE-valueIdentityDescription
gi|449454973|ref|XP_004145228.1|1.1e-15099.29PREDICTED: uncharacterized protein LOC101222813 [Cucumis sativus][more]
gi|659068470|ref|XP_008444591.1|1.7e-11177.26PREDICTED: uncharacterized protein LOC103487859 [Cucumis melo][more]
gi|470148585|ref|XP_004309837.1|8.5e-5552.57PREDICTED: uncharacterized protein LOC101292863 [Fragaria vesca subsp. vesca][more]
gi|802554775|ref|XP_012065076.1|2.7e-5358.77PREDICTED: uncharacterized protein LOC105628287 [Jatropha curcas][more]
gi|590586778|ref|XP_007015797.1|8.8e-5253.95Chloroplast, nucleus, chloroplast envelope, putative [Theobroma cacao][more]
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: INTERPRO
TermDefinition
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0008150 biological_process
cellular_component GO:0005575 cellular_component
cellular_component GO:0016021 integral component of membrane
molecular_function GO:0003674 molecular_function
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
CSPI01G24490.1CSPI01G24490.1mRNA


InterPro
Analysis Name: InterPro Annotations of cucumber (PI183967)
Date Performed: 2017-01-17
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePANTHERPTHR35483FAMILY NOT NAMEDcoord: 1..267
score: 9.2
NoneNo IPR availablePANTHERPTHR35483:SF1GLYCINE-RICH PROTEINcoord: 1..267
score: 9.2