CsGy1G023950 (gene) Cucumber (Gy14) v2 | Cucurbit Genomics Database (CuGenDB)

Overview


Name	CsGy1G023950
Type	gene
Organism	Cucumis sativus (Cucumber (Gy14) v2)
Description	glycine-rich protein
Location	Chr1 : 22671164 .. 22674434 (-)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRexonCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

GAAGGAAGGGAATTGGTGAAATTGAGCATAGTTGTGAGTTAGCCCAATTATTACTCTCTCATAACCTAAAAAGCCCATTTCTCTATCAGTCCATTGCCACCTACCGATGCTCATTATCCCTTCTTCCTTCTCCGCAACAACCTCCACCGCCACACCCCCATTCCACCGTCATTCACTCGCCGACACGCACCACTACCCACCACATTCCCTCATCTTCCGCCCAGGTTATCTCTCTCTCTCTCTCTCTCTCTCTCTCAGTCTCAGTCTCTGGTTTCTAAGCCTTTTCTTTTCCTTTCTATTCTCTTTTCTTTCATCGATTCGACCAATTCGATAACTGGGTACTTTTGGAATGATCAACTGATTAAAATTACACTTGTATAGCCTCTACTTAAGCTTTTGAATTTAGGGTAGATATTACAAAAATATGGCTCTATGCGATTATGAATAGCTATTTTATCTGGTTATGTCTGGTAATTGTTATGATTCATACATGATATGAGAACTTGGATGTCAGGGTGCTGGAGTGTGGCATATGACCATAGGGTGTTTATCAAAGGATGAGCAGCATGCAGATAACTGCTACACAGAATTCTATTTGTGCCAATAAATCAATATGCCTTGTTTCTAAGTCAATATATCCATCATTCCATGCTAATCAGTCACGACGTGCTGTTGTAAATCTAAGTGCCAATGCATCTTATTTCAAGCAGGGTCTACCAGTTTTGAAGTATGAACATCGGAGGGTTGGATTAAAATATCAGCATACACCAATTGTTTCCTTATACGGTAGCAAGGGAAAGGGCAGTGATGATGGGGTGAGAGCATTTCTTAATTGTTCGTTTGTGATCATTAGATTGTCTATTCGGCTCTATTCTTCTATATGTTTCTTTCTGATATAACTATTAGTAAATTTTATTTTCTGATGCTTTGCTCTACCTATAATACTCTGCTTGGGTTTCTTCTTTCTTCTTTCTTCTTTCTTCTTTTTCCTTTCCTTTTTTATTTTAAATTGTTATCTTTGACGTGTTAAAAGGGAAAAAAAGTTCATAATATGGTTTCTAATGTTCTCCGAATGATTGAAGGATTGGTGGAACTACGCTTCTCTGAGACTTCAGATTGTGTAACATGCTTCTTGAATTTCTCGTGTGTCATTTTCTGTTCCACTAAGCAACGGTGGATGGTCATGAAGTACATTTTAATTGCTGGAATTTTTCAAACTTGAGGAATTTAGAATGGCACTGTTAGTTCTGTTTTCCCACGAGTGTTGAATATTCATCAATATGCTTACTTTGCAAAAGTCAGCCATTGTAATCTTTTTTTTCATAAACCATTAAGGTTACTCCTTATGAAGATTGGAACATTTAACAAGAACATGTGTTTGGTTTGATATCAAGTGTCAACCATCTTTTTCACTCTTTATTTCATGAATGTTCCTCATGCTAGGAATTATTGTTGTTCATTCACTTTTCCAGAAAGTGAGCAAGTTTGTTTTCCCCCCCTAATTTCCTTTTTTGGTTCAAGTTGCTTGATATTCAATACACAATGGTAGGAGGATTTGGAGCGTTTATTCATTTAACCACTATTATGTTCATGTCCCTATTTTTGAATTTCAAATGTGCAAATGATAACCTTGGAGTTTGACGAGTTTCTATTTGTTTAAGAGGTATCTGTTAATCTAGATATAGTAATAGTACTTTGTTTCTAGCAGGGTTCTCCATGGAAAGGTTTGGACAAAGTTGTTGAAAGTTTTAAGGGACGATCAGTAGAAGATGTCTTGCGACAACAAATTGAAAAGAAAGAGTTCTATGATGGTGGAGATGGTGGCAAAAGACCTCCAGGTGGCGGCGGCGGCAGTGGTGGTGGCGACAGCGGTGATGGTGGCGAGGATAGCTCTAGTGGATCTGAGGATTATAGTCTCACAGGAATTATGGATGAAATACTGCAAGTCATTCTGGCGACCCTCGGCTTAGTTTTCGTAGTAATATACTCATTTAACATTTTCTATTGGAAATGGCATTTCAATCAGTCTTAAAAAGTTACAACTAACCAAACAGAAAGTAGAGGAATTCACTGGTAAAAAAAGTCTCGAGTTAGCTTAATAGTACATATTTCGATGTAGGGCCTGATAACAAGGAGATTTCCTAGACTTGATATTTATAGTTAACTACTAGATCTACTGTTTTGACTCCATAAAGCCTTTGATGAAGAAAATAACTGGCCTTCATATATTCAGGACTAGTAAAGTTAAACTCTAGATGTGAGCCAACAAAGTCAACCTTCACGAAATTGGATGGTAATGCTGTAAAAACCGCAACCTTTTCTCCTTTTGCTCTCTCTGTTGTCAAGTTAAGAGAAAACACAATATTCATAACTCAGAAAGCTGGAAAGGAATAAGAGTATGTACCATGAAAATCATGTTTATTTGAATACATATCTTGACATTGAATATGTACTAAATGAGGAAATTTTTTAAACATGATTGTTGGTTGTGTACTTGGGACAAGTTAATTAGTTACAAAGCTTGGCTTATGTTTTCTTGTTTGTGGTGGGCAGTACATTTATATACTCAGTGGGGAAGAGCTATCGCGATTAGCGAAGGATTACATAAAGTATCTATTTGGAGGAAGCAAGAGTGTGCGTTTGAAGCGAGCGATGTACAACTGGGGAAAGTTTTACCAAAGCCTCATGAAAAAGAAGAAATATGATCAATATTGGCTGGAGAAAGCTATTCTTAGCACTCCAACATGGTGGGATAATCCTGATAAGTATATGCCTAAGAAGGCACAGAATCAGAAACAGAATGTTGCATCAGATGATTATGATGAAACCGATTACCTAGACTCTGATTATGGTGAAATTGATTTCTAAAGTCTGATTATGGTGAAATCGATTAAGTAAAGTCTGATGATGAGGAATTCTGAATCCTTCTGCTTTTCTGTAAACCAACCTGATGTGTCTTTTTCTGCTGTCAATTTTTGTTTTCTGAGATGCTAAATTTGATATGTTATGTTGTAGGATCTTGGTGGACTGATGTACATAACATGAGATTTTGTCACTTTTTATAATGTTCTTAGTTATGTGATCTCAAAGTCTTTCTGGTGATTGGAAGCGACTTAGTCCCAATGACCATAAATCTTAGAGGCATGGGCAAGTAGTAGAGTTTGTATAGTCAAGCATGAAATTAATTTTTTTAATTGTGGAGCTCACAAATTCCTTGGCCCAAAGAGGAGCTCTCAACTCCATTATCTTCCCTAACAACTTTGAAATCTAG

mRNA sequence

GAAGGAAGGGAATTGGTGAAATTGAGCATAGTTGTGAGTTAGCCCAATTATTACTCTCTCATAACCTAAAAAGCCCATTTCTCTATCAGTCCATTGCCACCTACCGATGCTCATTATCCCTTCTTCCTTCTCCGCAACAACCTCCACCGCCACACCCCCATTCCACCGTCATTCACTCGCCGACACGCACCACTACCCACCACATTCCCTCATCTTCCGCCCAGGGTGCTGGAGTGTGGCATATGACCATAGGGTGTTTATCAAAGGATGAGCAGCATGCAGATAACTGCTACACAGAATTCTATTTGTGCCAATAAATCAATATGCCTTGTTTCTAAGTCAATATATCCATCATTCCATGCTAATCAGTCACGACGTGCTGTTGTAAATCTAAGTGCCAATGCATCTTATTTCAAGCAGGGTCTACCAGTTTTGAAGTATGAACATCGGAGGGTTGGATTAAAATATCAGCATACACCAATTGTTTCCTTATACGGTAGCAAGGGAAAGGGCAGTGATGATGGGGGTTCTCCATGGAAAGGTTTGGACAAAGTTGTTGAAAGTTTTAAGGGACGATCAGTAGAAGATGTCTTGCGACAACAAATTGAAAAGAAAGAGTTCTATGATGGTGGAGATGGTGGCAAAAGACCTCCAGGTGGCGGCGGCGGCAGTGGTGGTGGCGACAGCGGTGATGGTGGCGAGGATAGCTCTAGTGGATCTGAGGATTATAGTCTCACAGGAATTATGGATGAAATACTGCAAGTCATTCTGGCGACCCTCGGCTTAGTTTTCGTATACATTTATATACTCAGTGGGGAAGAGCTATCGCGATTAGCGAAGGATTACATAAAGTATCTATTTGGAGGAAGCAAGAGTGTGCGTTTGAAGCGAGCGATGTACAACTGGGGAAAGTTTTACCAAAGCCTCATGAAAAAGAAGAAATATGATCAATATTGGCTGGAGAAAGCTATTCTTAGCACTCCAACATGGTGGGATAATCCTGATAAGTATATGCCTAAGAAGGCACAGAATCAGAAACAGAATGTTGCATCAGATGATTATGATGAAACCGATTACCTAGACTCTGATTATGGTGAAATTGATTTCTAAAGTCTGATTATGGTGAAATCGATTAAGTAAAGTCTGATGATGAGGAATTCTGAATCCTTCTGCTTTTCTGTAAACCAACCTGATGTGTCTTTTTCTGCTGTCAATTTTTGTTTTCTGAGATGCTAAATTTGATATGTTATGTTGTAGGATCTTGGTGGACTGATGTACATAACATGAGATTTTGTCACTTTTTATAATGTTCTTAGTTATGTGATCTCAAAGTCTTTCTGGTGATTGGAAGCGACTTAGTCCCAATGACCATAAATCTTAGAGGCATGGGCAAGTAGTAGAGTTTGTATAGTCAAGCATGAAATTAATTTTTTTAATTGTGGAGCTCACAAATTCCTTGGCCCAAAGAGGAGCTCTCAACTCCATTATCTTCCCTAACAACTTTGAAATCTAG

Coding sequence (CDS)

ATGAGCAGCATGCAGATAACTGCTACACAGAATTCTATTTGTGCCAATAAATCAATATGCCTTGTTTCTAAGTCAATATATCCATCATTCCATGCTAATCAGTCACGACGTGCTGTTGTAAATCTAAGTGCCAATGCATCTTATTTCAAGCAGGGTCTACCAGTTTTGAAGTATGAACATCGGAGGGTTGGATTAAAATATCAGCATACACCAATTGTTTCCTTATACGGTAGCAAGGGAAAGGGCAGTGATGATGGGGGTTCTCCATGGAAAGGTTTGGACAAAGTTGTTGAAAGTTTTAAGGGACGATCAGTAGAAGATGTCTTGCGACAACAAATTGAAAAGAAAGAGTTCTATGATGGTGGAGATGGTGGCAAAAGACCTCCAGGTGGCGGCGGCGGCAGTGGTGGTGGCGACAGCGGTGATGGTGGCGAGGATAGCTCTAGTGGATCTGAGGATTATAGTCTCACAGGAATTATGGATGAAATACTGCAAGTCATTCTGGCGACCCTCGGCTTAGTTTTCGTATACATTTATATACTCAGTGGGGAAGAGCTATCGCGATTAGCGAAGGATTACATAAAGTATCTATTTGGAGGAAGCAAGAGTGTGCGTTTGAAGCGAGCGATGTACAACTGGGGAAAGTTTTACCAAAGCCTCATGAAAAAGAAGAAATATGATCAATATTGGCTGGAGAAAGCTATTCTTAGCACTCCAACATGGTGGGATAATCCTGATAAGTATATGCCTAAGAAGGCACAGAATCAGAAACAGAATGTTGCATCAGATGATTATGATGAAACCGATTACCTAGACTCTGATTATGGTGAAATTGATTTCTAA

Protein sequence

MSSMQITATQNSICANKSICLVSKSIYPSFHANQSRRAVVNLSANASYFKQGLPVLKYEHRRVGLKYQHTPIVSLYGSKGKGSDDGGSPWKGLDKVVESFKGRSVEDVLRQQIEKKEFYDGGDGGKRPPGGGGGSGGGDSGDGGEDSSSGSEDYSLTGIMDEILQVILATLGLVFVYIYILSGEELSRLAKDYIKYLFGGSKSVRLKRAMYNWGKFYQSLMKKKKYDQYWLEKAILSTPTWWDNPDKYMPKKAQNQKQNVASDDYDETDYLDSDYGEIDF

Homology

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BLAST of CsGy1G023950 vs. NCBI nr
Match: XP_004145228.1 (PREDICTED: uncharacterized protein LOC101222813 [Cucumis sativus] >KGN65868.1 hypothetical protein Csa_1G534740 [Cucumis sativus])

HSP 1 Score: 462.2 bits (1188), Expect = 1.2e-126
Identity = 280/280 (100.00%), Postives = 280/280 (100.00%), Query Frame = 0


Query: 1   MSSMQITATQNSICANKSICLVSKSIYPSFHANQSRRAVVNLSANASYFKQGLPVLKYEH 60
           MSSMQITATQNSICANKSICLVSKSIYPSFHANQSRRAVVNLSANASYFKQGLPVLKYEH
Sbjct: 1   MSSMQITATQNSICANKSICLVSKSIYPSFHANQSRRAVVNLSANASYFKQGLPVLKYEH 60

Query: 61  RRVGLKYQHTPIVSLYGSKGKGSDDGGSPWKGLDKVVESFKGRSVEDVLRQQIEXXXXXX 120
           RRVGLKYQHTPIVSLYGSKGKGSDDGGSPWKGLDKVVESFKGRSVEDVLRQQIEXXXXXX
Sbjct: 61  RRVGLKYQHTPIVSLYGSKGKGSDDGGSPWKGLDKVVESFKGRSVEDVLRQQIEXXXXXX 120

Query: 121 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXYSLTGIMDEILQVILATLGLVFVYIYI 180
           XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXYSLTGIMDEILQVILATLGLVFVYIYI
Sbjct: 121 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXYSLTGIMDEILQVILATLGLVFVYIYI 180

Query: 181 LSGEELSRLAKDYIKYLFGGSKSVRLKRAMYNWGKFYQSLMKKKKYDQYWLEKAILSTPT 240
           LSGEELSRLAKDYIKYLFGGSKSVRLKRAMYNWGKFYQSLMKKKKYDQYWLEKAILSTPT
Sbjct: 181 LSGEELSRLAKDYIKYLFGGSKSVRLKRAMYNWGKFYQSLMKKKKYDQYWLEKAILSTPT 240

Query: 241 WWDNPDKYMPKKAQNQKQNVASDDYDETDYLDSDYGEIDF 281
           WWDNPDKYMPKKAQNQKQNVASDDYDETDYLDSDYGEIDF
Sbjct: 241 WWDNPDKYMPKKAQNQKQNVASDDYDETDYLDSDYGEIDF 280

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BLAST of CsGy1G023950 vs. NCBI nr
Match: XP_008444591.1 (PREDICTED: uncharacterized protein LOC103487859 [Cucumis melo])

HSP 1 Score: 342.8 bits (878), Expect = 1.1e-90
Identity = 219/277 (79.06%), Postives = 243/277 (87.73%), Query Frame = 0


Query: 1   MSSMQITATQNSICANKSICLVSKSIYPSFHANQSRRAVVNLSANASYFKQGLPVLKYEH 60
           MSSMQITATQNSICANKSICLVSKSIYPSFHANQS RAVVNLSANASYFKQGLP+LKY+H
Sbjct: 1   MSSMQITATQNSICANKSICLVSKSIYPSFHANQSLRAVVNLSANASYFKQGLPILKYKH 60

Query: 61  RRVGLKYQHTPIVSLYGSKGKGSDDGGSPWKGLDKVVESF-KGRSVEDVLRQQIE--XXX 120
           RRVGLK+QHTPIVSL+GSKGKGSDDGGSPWK  DKVVESF KG SVEDVLR+QIE  XXX
Sbjct: 61  RRVGLKHQHTPIVSLFGSKGKGSDDGGSPWKAFDKVVESFKKGGSVEDVLRKQIEXXXXX 120

Query: 121 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXYSLTGIMDEILQVILATLGLVFVY 180
           XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX   +SL   +DE LQV+LATLG +F+Y
Sbjct: 121 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAKDFSLAEALDETLQVVLATLGFIFMY 180

Query: 181 IYILSGEELSRLAKDYIKYLFGGSKSVRLKRAMYNWGKFYQSLMKKKKYDQYWLEKAILS 240
            Y+L+GEE++RL KDYIKY FGGSKSVRL+RAMY WG+FYQ L  KKKYD++WLEKAI++
Sbjct: 181 FYLLNGEEVTRLLKDYIKYRFGGSKSVRLRRAMYEWGRFYQRLTAKKKYDEFWLEKAIIN 240

Query: 241 TPTWWDNPDKYMPK-----KAQNQKQNVASDDYDETD 270
           TPTWWD+PD Y        KA+NQ++N ASDD  ETD
Sbjct: 241 TPTWWDHPDNYRHAAMAYGKAENQEKNFASDDDGETD 277

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BLAST of CsGy1G023950 vs. NCBI nr
Match: XP_022140099.1 (uncharacterized protein LOC111010834 [Momordica charantia])

HSP 1 Score: 315.1 bits (806), Expect = 2.4e-82
Identity = 202/282 (71.63%), Postives = 231/282 (81.91%), Query Frame = 0


Query: 1   MSSMQITATQNSICANKSICLVSKSIYPSFHANQSRRAVVNLSANASYFKQGLPVLKYEH 60
           MSSMQITATQNSIC+++SIC+ SKSIYPSF A +SR A+VNLSANASYFKQGLPVLKY+H
Sbjct: 1   MSSMQITATQNSICSSRSICIASKSIYPSFRATRSRSALVNLSANASYFKQGLPVLKYKH 60

Query: 61  RRVGLKYQHTPIVSLYGSKGKGSDDGGSPWKGLDKVVESF-KGRSVEDVLRQQIEXXXXX 120
           RR GL +QHTPIVSL+GSKGK S DGGSPWK  DKVVE+F KGRSVEDVLRQQIE     
Sbjct: 61  RRAGLNHQHTPIVSLFGSKGKESGDGGSPWKTFDKVVENFKKGRSVEDVLRQQIE----- 120

Query: 121 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXYSLTGIMDEILQVILATLGLVFVYIY 180
               XXXXXXXXXXXXXXXXXXXXXXXXXXXXXX     I+DE LQVILAT+G +F+YIY
Sbjct: 121 ----XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXIIDETLQVILATIGFIFLYIY 180

Query: 181 ILSGEELSRLAKDYIKYLFGGSKSVRLKRAMYNWGKFYQSLMKKKKYDQYWLEKAILSTP 240
           I+SGEEL+RLAKDYIK++FGGSKSVRLKRAMY WG+FYQ L +KK+YD+YWLEKAI++TP
Sbjct: 181 IISGEELTRLAKDYIKFVFGGSKSVRLKRAMYKWGRFYQKLTEKKQYDEYWLEKAIINTP 240

Query: 241 TWWDNPDK-------YMPKKAQNQKQNVASDDYDETDYLDSD 275
           TWWD+PDK       YM  + +NQ      +D  E D  +SD
Sbjct: 241 TWWDHPDKYRRAVMDYMESQYENQHSASNVNDDAEMDVSNSD 273

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BLAST of CsGy1G023950 vs. NCBI nr
Match: XP_022955156.1 (uncharacterized protein LOC111457207 [Cucurbita moschata])

HSP 1 Score: 283.9 bits (725), Expect = 6.0e-73
Identity = 180/249 (72.29%), Postives = 206/249 (82.73%), Query Frame = 0


Query: 2   SSMQITATQNSICANKSICLVSKSIYPSFHANQSRRAVVNLSANASYFKQGLPVLKYEHR 61
           S MQITATQNS+C NKSICLVSKS YPSF A+Q+R A VN SANASY K+GLPVLKY+HR
Sbjct: 3   SMMQITATQNSLCPNKSICLVSKSTYPSFLASQTRSAFVNPSANASYLKKGLPVLKYDHR 62

Query: 62  RVGLKYQHTPIVSLYGSKGKGSDDGGSPWKGLDKVVESF-KGRSVEDVLRQQIEXXXXXX 121
           RVGLK+++TPI SL+GSKGK + DGGSPWK  DKVVE+F KGRSVED+LRQQIE      
Sbjct: 63  RVGLKHRYTPIASLFGSKGKDNADGGSPWKAFDKVVENFKKGRSVEDILRQQIENKDFYD 122

Query: 122 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXYSLTGIMDEILQVILATLGLVFVYIYI 181
           XXXXXXXXXXXXXXXXXXXXXXXXXXXX      S+ GI++E + V+LAT+GLV VYIYI
Sbjct: 123 XXXXXXXXXXXXXXXXXXXXXXXXXXXXP-----SILGILEETMHVVLATIGLVLVYIYI 182

Query: 182 LSGEELSRLAKDYIKYLFGGSKSVRLKRAMYNWGKFY-QSLMKKKKYDQYWLEKAILSTP 241
           + G+EL  LAKDYIKYLFG  +S RLK AMY+WGKFY +   KK K D+YWLEKAIL+TP
Sbjct: 183 IEGQELVLLAKDYIKYLFGADRSARLKSAMYSWGKFYKRRTQKKPKPDEYWLEKAILNTP 242

Query: 242 TWWDNPDKY 249
           TWWD+PDKY
Sbjct: 243 TWWDHPDKY 246

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BLAST of CsGy1G023950 vs. NCBI nr
Match: XP_023542514.1 (uncharacterized protein LOC111802398 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 282.3 bits (721), Expect = 1.7e-72
Identity = 177/249 (71.08%), Postives = 204/249 (81.93%), Query Frame = 0


Query: 2   SSMQITATQNSICANKSICLVSKSIYPSFHANQSRRAVVNLSANASYFKQGLPVLKYEHR 61
           S MQITATQNS+C NKSICLVSKS+YPSF A+Q+R A VN SANASY K+GLPVLKY+HR
Sbjct: 3   SMMQITATQNSLCPNKSICLVSKSMYPSFLASQTRSAFVNPSANASYLKKGLPVLKYDHR 62

Query: 62  RVGLKYQHTPIVSLYGSKGKGSDDGGSPWKGLDKVVESF-KGRSVEDVLRQQIEXXXXXX 121
           RVGLK+++TPI SL+GSKGK S DG SPWK  DKVVE+F KGRSVED+LRQQIE      
Sbjct: 63  RVGLKHRYTPIASLFGSKGKDSGDGASPWKAFDKVVENFKKGRSVEDILRQQIENKDFYD 122

Query: 122 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXYSLTGIMDEILQVILATLGLVFVYIYI 181
           XXXXXXXXXXXXXXXXXXXXXXXXXX        S+ GI++E + V+LAT+GLV VYIYI
Sbjct: 123 XXXXXXXXXXXXXXXXXXXXXXXXXXEGP-----SILGILEETMHVVLATIGLVLVYIYI 182

Query: 182 LSGEELSRLAKDYIKYLFGGSKSVRLKRAMYNWGKFYQSLMKKK-KYDQYWLEKAILSTP 241
           + G+EL  L KDYIKYLFG  +S RLK AMY+WGKFY+   +KK K D+YWLEKAIL+TP
Sbjct: 183 IEGQELVLLVKDYIKYLFGADQSARLKSAMYSWGKFYKRRTRKKPKPDEYWLEKAILNTP 242

Query: 242 TWWDNPDKY 249
           TWWD+PDKY
Sbjct: 243 TWWDHPDKY 246

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BLAST of CsGy1G023950 vs. TAIR10
Match: AT2G43630.1 (FUNCTIONS IN: molecular_function unknown)

HSP 1 Score: 142.1 bits (357), Expect = 5.1e-34
Identity = 118/231 (51.08%), Postives = 156/231 (67.53%), Query Frame = 0


Query: 20  CLVSKSIYPSFHANQSRRAVVNLSANASYFKQGLPVLKYEHRRVGLKYQHTPIVSLYGSK 79
           C+ S  I  S   +   R    L A A+   Q  P+L +  R    K + +  V L+G K
Sbjct: 23  CISSVPIRSSVRFDHFPRTSFTLRATAAVSTQFSPLLDHRRRLPTGKSKQSSAVCLFGGK 82

Query: 80  GK--GSDDGGSPWKGLDKVVESFKGRSVEDVLRQQIEXXXXXXXXXXXXXXXXXXXXXXX 139
            K  GSD+  SPWK ++K +     +SVED+LR+QI+         XXXXXXXXXXXXXX
Sbjct: 83  DKPDGSDE-ISPWKAIEKAMGK---KSVEDMLREQIQ-KKDFYDTDXXXXXXXXXXXXXX 142

Query: 140 XXXXXXXXXXXXXXXXYSLTGIMDEILQVILATLGLVFVYIYILSGEELSRLAKDYIKYL 199
           XXXXXXXXXXXXXXXX  L GI DE LQV+LATLG +F+Y YI++GEEL +LA+DYI++L
Sbjct: 143 XXXXXXXXXXXXXXXXXGLAGIADETLQVVLATLGFIFLYTYIITGEELVKLARDYIRFL 202

Query: 200 FGGSKSVRLKRAMYNWGKFYQSLMKKKKYDQYWLEKAILSTPTWWDNPDKY 249
            G  K+VRL RAM +W  F + + +++ YD+YWLEKAI++TPTW+D+P+KY
Sbjct: 203 MGRPKTVRLTRAMDSWNGFLEKMSRQRVYDEYWLEKAIINTPTWYDSPEKY 248

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BLAST of CsGy1G023950 vs. TAIR10
Match: AT3G59640.1 (glycine-rich protein)

HSP 1 Score: 104.8 bits (260), Expect = 9.1e-23
Identity = 97/239 (40.59%), Postives = 137/239 (57.32%), Query Frame = 0


Query: 6   ITATQNSICANKSICL-------VSKSIYPS---FHANQSRRAVVNLSANASYFKQGLPV 65
           +++TQ ++C     C        VS + + S   F      +  +  SA++S   Q  P+
Sbjct: 1   MSSTQANLCRPSLFCARTTQTRHVSSAPFMSSLRFDYRPLPKLAIRASASSSMSSQFSPL 60

Query: 66  LKYEHRRVGLKYQHTPIVSLYGSKGK--GSDDGGSPWKGLDKVVESFKGRSVEDVLRQQI 125
             +  R      +  P+V L G K K  GS++  S W+ ++K +     +SVED+LR+QI
Sbjct: 61  QNHRCR----NQRQGPVVCLLGGKDKSNGSNELSSTWEAIEKAMGK---KSVEDMLREQI 120

Query: 126 EXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXYSLTGIMDEILQVILATLGL 185
           +                  XXXXXXXXXXXXXXXXXXXXX  L    DE LQV+LATLG 
Sbjct: 121 Q------KKDTGGIPPRGRXXXXXXXXXXXXXXXXXXXXXXXLASFGDETLQVVLATLGF 180

Query: 186 VFVYIYILSGEELSRLAKDYIKYLFGGSKSVRLKRAMYNWGKFYQSLMKKKKYDQYWLE 233
           +F+Y YI++GEEL RLA+DYI+YL G  KSVRL R M  W +F++ + +KK Y++YWL+
Sbjct: 181 IFLYFYIINGEELFRLARDYIRYLIGRPKSVRLTRVMEGWSRFFEKMSRKKVYNEYWLK 226

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BLAST of CsGy1G023950 vs. TrEMBL
Match: tr|A0A0A0LVP5|A0A0A0LVP5_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_1G534740 PE=4 SV=1)

HSP 1 Score: 462.2 bits (1188), Expect = 8.1e-127
Identity = 280/280 (100.00%), Postives = 280/280 (100.00%), Query Frame = 0


Query: 1   MSSMQITATQNSICANKSICLVSKSIYPSFHANQSRRAVVNLSANASYFKQGLPVLKYEH 60
           MSSMQITATQNSICANKSICLVSKSIYPSFHANQSRRAVVNLSANASYFKQGLPVLKYEH
Sbjct: 1   MSSMQITATQNSICANKSICLVSKSIYPSFHANQSRRAVVNLSANASYFKQGLPVLKYEH 60

Query: 61  RRVGLKYQHTPIVSLYGSKGKGSDDGGSPWKGLDKVVESFKGRSVEDVLRQQIEXXXXXX 120
           RRVGLKYQHTPIVSLYGSKGKGSDDGGSPWKGLDKVVESFKGRSVEDVLRQQIEXXXXXX
Sbjct: 61  RRVGLKYQHTPIVSLYGSKGKGSDDGGSPWKGLDKVVESFKGRSVEDVLRQQIEXXXXXX 120

Query: 121 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXYSLTGIMDEILQVILATLGLVFVYIYI 180
           XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXYSLTGIMDEILQVILATLGLVFVYIYI
Sbjct: 121 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXYSLTGIMDEILQVILATLGLVFVYIYI 180

Query: 181 LSGEELSRLAKDYIKYLFGGSKSVRLKRAMYNWGKFYQSLMKKKKYDQYWLEKAILSTPT 240
           LSGEELSRLAKDYIKYLFGGSKSVRLKRAMYNWGKFYQSLMKKKKYDQYWLEKAILSTPT
Sbjct: 181 LSGEELSRLAKDYIKYLFGGSKSVRLKRAMYNWGKFYQSLMKKKKYDQYWLEKAILSTPT 240

Query: 241 WWDNPDKYMPKKAQNQKQNVASDDYDETDYLDSDYGEIDF 281
           WWDNPDKYMPKKAQNQKQNVASDDYDETDYLDSDYGEIDF
Sbjct: 241 WWDNPDKYMPKKAQNQKQNVASDDYDETDYLDSDYGEIDF 280

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BLAST of CsGy1G023950 vs. TrEMBL
Match: tr|A0A1S3BA69|A0A1S3BA69_CUCME (uncharacterized protein LOC103487859 OS=Cucumis melo OX=3656 GN=LOC103487859 PE=4 SV=1)

HSP 1 Score: 342.8 bits (878), Expect = 7.2e-91
Identity = 219/277 (79.06%), Postives = 243/277 (87.73%), Query Frame = 0


Query: 1   MSSMQITATQNSICANKSICLVSKSIYPSFHANQSRRAVVNLSANASYFKQGLPVLKYEH 60
           MSSMQITATQNSICANKSICLVSKSIYPSFHANQS RAVVNLSANASYFKQGLP+LKY+H
Sbjct: 1   MSSMQITATQNSICANKSICLVSKSIYPSFHANQSLRAVVNLSANASYFKQGLPILKYKH 60

Query: 61  RRVGLKYQHTPIVSLYGSKGKGSDDGGSPWKGLDKVVESF-KGRSVEDVLRQQIE--XXX 120
           RRVGLK+QHTPIVSL+GSKGKGSDDGGSPWK  DKVVESF KG SVEDVLR+QIE  XXX
Sbjct: 61  RRVGLKHQHTPIVSLFGSKGKGSDDGGSPWKAFDKVVESFKKGGSVEDVLRKQIEXXXXX 120

Query: 121 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXYSLTGIMDEILQVILATLGLVFVY 180
           XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX   +SL   +DE LQV+LATLG +F+Y
Sbjct: 121 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAKDFSLAEALDETLQVVLATLGFIFMY 180

Query: 181 IYILSGEELSRLAKDYIKYLFGGSKSVRLKRAMYNWGKFYQSLMKKKKYDQYWLEKAILS 240
            Y+L+GEE++RL KDYIKY FGGSKSVRL+RAMY WG+FYQ L  KKKYD++WLEKAI++
Sbjct: 181 FYLLNGEEVTRLLKDYIKYRFGGSKSVRLRRAMYEWGRFYQRLTAKKKYDEFWLEKAIIN 240

Query: 241 TPTWWDNPDKYMPK-----KAQNQKQNVASDDYDETD 270
           TPTWWD+PD Y        KA+NQ++N ASDD  ETD
Sbjct: 241 TPTWWDHPDNYRHAAMAYGKAENQEKNFASDDDGETD 277

[Close]

BLAST of CsGy1G023950 vs. TrEMBL
Match: tr|A0A2P4KWK7|A0A2P4KWK7_QUESU (Uncharacterized protein OS=Quercus suber OX=58331 GN=CFP56_31071 PE=4 SV=1)

HSP 1 Score: 189.9 bits (481), Expect = 7.8e-45
Identity = 142/252 (56.35%), Postives = 174/252 (69.05%), Query Frame = 0


Query: 1   MSSMQITATQNSICAN---KSICLVSKSIYPSFHANQSRRAVVNLSANASYFKQGLPVLK 60
           MS+MQITA Q  IC      S  L S          +  R  ++ + NAS  +Q +PV  
Sbjct: 1   MSTMQITAYQPKICVRHIPHSYRLPSNPCILPTLPKRVPRTSLSTNVNASRHQQCVPV-- 60

Query: 61  YEHRRVGLKYQHTPIVSLYGSKGK-GSDDGGSPWKGLDKVVESFKGRSVEDVLRQQIEXX 120
                   KYQ +  V L+G KGK G ++GGSPW     ++  FKG+SVEDVLRQQI XX
Sbjct: 61  -------SKYQQSMPVCLFGGKGKTGGENGGSPWNAFQNILGRFKGKSVEDVLRQQIXXX 120

Query: 121 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXYSLTGIMDEILQVILATLGLVFV 180
           XXXXXXXXXXXXXXXXXXXXXXXXXXX            L GI+DE +QVILAT+G +F+
Sbjct: 121 XXXXXXXXXXXXXXXXXXXXXXXXXXXDE---------DLAGIIDETVQVILATIGFIFM 180

Query: 181 YIYILSGEELSRLAKDYIKYLFGGSKSVRLKRAMYNWGKFYQSLMKKKKYDQYWLEKAIL 240
           Y+YI+SGEE++RLAKDYIKYLFGGS+S RLKRAMY WG+FY+ L +KK  D +WLEKAI+
Sbjct: 181 YVYIISGEEMARLAKDYIKYLFGGSQSARLKRAMYKWGRFYKKLTEKKVVDPFWLEKAII 234

Query: 241 STPTWWDNPDKY 249
           +TPTWWD+P+KY
Sbjct: 241 NTPTWWDSPEKY 234

[Close]

BLAST of CsGy1G023950 vs. TrEMBL
Match: tr|A0A251R0R7|A0A251R0R7_PRUPE (Uncharacterized protein OS=Prunus persica OX=3760 GN=PRUPE_1G205800 PE=4 SV=1)

HSP 1 Score: 188.0 bits (476), Expect = 3.0e-44
Identity = 143/261 (54.79%), Postives = 181/261 (69.35%), Query Frame = 0


Query: 1   MSSMQITATQNSICANKSICLVSKSIYPSFHANQSRRAVVNLSANASYFKQGLPVLKYEH 60
           MS+ QIT++Q SIC   +    S+++ PS          +  + NAS  +Q +PVLK + 
Sbjct: 1   MSTFQITSSQPSICFRNT----SQALRPS--PKLLVPTCLQPTYNASIRQQRMPVLKAQQ 60

Query: 61  RRVGLKYQHTPIVSLYGSKGKG-SDDGGSPWKGLDKVVESF-KGRSVEDVLRQQIEXXXX 120
            RV  KY  +  V L G KGK  S D GSPWK L+K + +  K +S+EDVLRQQIE    
Sbjct: 61  CRVLSKYHQSAPVCLLGGKGKSESGDEGSPWKALEKAMGNLKKDQSIEDVLRQQIE---R 120

Query: 121 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXYSLTGIMDEILQVILATLGLVFVYI 180
                   XXXXXXXXXXXXXXXXXXXXXXXXXXX  L GIMDE LQVILAT+G +F+Y 
Sbjct: 121 NEFYEERGXXXXXXXXXXXXXXXXXXXXXXXXXXXXGLAGIMDETLQVILATVGFLFLYF 180

Query: 181 YILSGEELSRLAKDYIKYLFGGSKSVRLKRAMYNWGKFYQSLMKKKKYDQYWLEKAILST 240
           YI+SGEE +RLAKDYIK+L  GSKS+RL+R+MY WG+FY++L +KK YD++WLEKAI++T
Sbjct: 181 YIISGEEWTRLAKDYIKFLLSGSKSIRLQRSMYKWGRFYKNLTEKKYYDKFWLEKAIITT 240

Query: 241 PTWWDNPDKYMPKKAQNQKQN 260
           PTWWD+P+KY      N + N
Sbjct: 241 PTWWDSPEKYRHIVRSNLESN 252

[Close]

BLAST of CsGy1G023950 vs. TrEMBL
Match: tr|A0A2P6QUA4|A0A2P6QUA4_ROSCH (Uncharacterized protein OS=Rosa chinensis OX=74649 GN=RchiOBHm_Chr4g0406201 PE=4 SV=1)

HSP 1 Score: 182.2 bits (461), Expect = 1.6e-42
Identity = 146/254 (57.48%), Postives = 183/254 (72.05%), Query Frame = 0


Query: 1   MSSMQITATQNSI---CANKSICLVSKSIYPSFHANQS-RRAVVNLSANASYFKQGLPVL 60
           MS++QI++    I    +++S+ L SK      HA  +  R  +  + NAS  ++ + VL
Sbjct: 1   MSTVQISSCNPCIRLRNSSQSLRLPSKPYILPIHAKHALLRNPLVATCNASIQQRCMTVL 60

Query: 61  KYEHRRVGLKYQHTPIVSLYGSKGK-GSDDGGSPWKGLDKVVESFKGR-SVEDVLRQQIE 120
           K +  R    YQ +  V L G KGK GSDD  SPWK L+K + + K   S+EDVLRQQIE
Sbjct: 61  KNQRCRAVSTYQQSFPVCLLGGKGKNGSDDEASPWKSLEKAMSNLKKESSIEDVLRQQIE 120

Query: 121 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXYSLTGIMDEILQVILATLGLV 180
                 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX    GI+DE LQVILAT+G +
Sbjct: 121 -----KXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGFAGIIDETLQVILATIGFI 180

Query: 181 FVYIYILSGEELSRLAKDYIKYLFGGSKSVRLKRAMYNWGKFYQSLMKKKKYDQYWLEKA 240
           F+Y+YI++GEE +RLAKDY+K+LF GS+SVRLKRAMY WG+FYQ L +KK YD++WLEKA
Sbjct: 181 FLYVYIITGEEWARLAKDYLKFLFSGSESVRLKRAMYKWGRFYQKLTEKKVYDKFWLEKA 240

Query: 241 ILSTPTWWDNPDKY 249
           I+STPTWWD+P KY
Sbjct: 241 IISTPTWWDSPAKY 249

The following BLAST results are available for this feature:

BLAST of CsGy1G023950 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_004145228.1	1.2e-126	100.00	PREDICTED: uncharacterized protein LOC101222813 [Cucumis sativus] >KGN65868.1 hy...	[more]
XP_008444591.1	1.1e-90	79.06	PREDICTED: uncharacterized protein LOC103487859 [Cucumis melo]	[more]
XP_022140099.1	2.4e-82	71.63	uncharacterized protein LOC111010834 [Momordica charantia]	[more]
XP_022955156.1	6.0e-73	72.29	uncharacterized protein LOC111457207 [Cucurbita moschata]	[more]
XP_023542514.1	1.7e-72	71.08	uncharacterized protein LOC111802398 [Cucurbita pepo subsp. pepo]	[more]

BLAST of CsGy1G023950 vs. TAIR10


Match Name	E-value	Identity	Description
AT2G43630.1	5.1e-34	51.08	FUNCTIONS IN: molecular_function unknown	[more]
AT3G59640.1	9.1e-23	40.59	glycine-rich protein	[more]

BLAST of CsGy1G023950 vs. Swiss-Prot


Match Name	E-value	Identity	Description

BLAST of CsGy1G023950 vs. TrEMBL


Match Name	E-value	Identity	Description
tr\|A0A0A0LVP5\|A0A0A0LVP5_CUCSA	8.1e-127	100.00	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_1G534740 PE=4 SV=1	[more]
tr\|A0A1S3BA69\|A0A1S3BA69_CUCME	7.2e-91	79.06	uncharacterized protein LOC103487859 OS=Cucumis melo OX=3656 GN=LOC103487859 PE=...	[more]
tr\|A0A2P4KWK7\|A0A2P4KWK7_QUESU	7.8e-45	56.35	Uncharacterized protein OS=Quercus suber OX=58331 GN=CFP56_31071 PE=4 SV=1	[more]
tr\|A0A251R0R7\|A0A251R0R7_PRUPE	3.0e-44	54.79	Uncharacterized protein OS=Prunus persica OX=3760 GN=PRUPE_1G205800 PE=4 SV=1	[more]
tr\|A0A2P6QUA4\|A0A2P6QUA4_ROSCH	1.6e-42	57.48	Uncharacterized protein OS=Rosa chinensis OX=74649 GN=RchiOBHm_Chr4g0406201 PE=4...	[more]

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0008150	biological_process
cellular_component	GO:0016021	integral component of membrane
molecular_function	GO:0003674	molecular_function

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CsGy1G023950.1	CsGy1G023950.1	mRNA

InterPro

Analysis Name: InterPro Annotations of cucumber Gy14 genome (v2)
Date Performed: 2018-09-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 265..280
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 252..280
None	No IPR available	PANTHER	PTHR35483	FAMILY NOT NAMED	coord: 1..260
None	No IPR available	PANTHER	PTHR35483:SF1	GLYCINE-RICH PROTEIN	coord: 1..260

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
CsGy1G023950	Cla019560	Watermelon (97103) v1	cgybwmB027
CsGy1G023950	Csa1G534740	Cucumber (Chinese Long) v2	cgybcuB002
CsGy1G023950	MELO3C002758	Melon (DHL92) v3.5.1	cgybmeB025
CsGy1G023950	ClCG03G006580	Watermelon (Charleston Gray)	cgybwcgB046
CsGy1G023950	CSPI01G24490	Wild cucumber (PI 183967)	cgybcpiB002
CsGy1G023950	CmaCh18G004850	Cucurbita maxima (Rimu)	cgybcmaB087
CsGy1G023950	CmoCh18G004610	Cucurbita moschata (Rifu)	cgybcmoB083
CsGy1G023950	Lsi02G009120	Bottle gourd (USVL1VR-Ls)	cgyblsiB019
CsGy1G023950	Cp4.1LG09g07480	Cucurbita pepo (Zucchini)	cgybcpeB019
CsGy1G023950	MELO3C002758.2	Melon (DHL92) v3.6.1	cgybmedB023
CsGy1G023950	CsaV3_1G036770	Cucumber (Chinese Long) v3	cgybcucB001
CsGy1G023950	Cla97C03G057870	Watermelon (97103) v2	cgybwmbB045
CsGy1G023950	Bhi08G001663	Wax gourd	cgybwgoB052

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:


Gene	Organism	Block
CsGy1G023950	Cucurbita maxima (Rimu)	cgybcmaB076
CsGy1G023950	Cucurbita moschata (Rifu)	cgybcmoB070
CsGy1G023950	Cucurbita pepo (Zucchini)	cgybcpeB072
CsGy1G023950	Melon (DHL92) v3.6.1	cgybmedB012
CsGy1G023950	Silver-seed gourd	carcgybB0220
CsGy1G023950	Silver-seed gourd	carcgybB0405
CsGy1G023950	Silver-seed gourd	carcgybB0429
CsGy1G023950	Wax gourd	cgybwgoB037