CsGy1G020700 (gene) Cucumber (Gy14) v2 | Cucurbit Genomics Database (CuGenDB)

Overview


Name	CsGy1G020700
Type	gene
Organism	Cucumis sativus (Cucumber (Gy14) v2)
Description	DNA polymerase epsilon subunit
Location	Chr1 : 19374591 .. 19385794 (+)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

AAGAACAAAACAAGAAATATTTATATGTTTCTATTCTATTTGTTTCAAGAAATAACTTATTTCTAAAAAAATAGGAAGAAAGTTGGAGAAAAAGTGAAGCAAAGTCTCAACCTAGAAGAATGAGCAGAAAGATAGGAGAATAGGTTGAGCCTCAGCGACTGAAACAGGTACGGCAACTTCCCCAACTGCTGAAACCCGGATACAGGAAGGAGAAGAACGGCTACGTGGACTGAGGCAGCTTCTAATGGCGCCGACTGATGGTTTGTGCGTCTTCTTATTGAAGTGTGAAATATGAGCTACTTGCTGACTCCCACTGGGTGGTAGGCTCTGGCCGGGTACCAAGAATTGAGTGAATATAGTGGGTTGGAAATCTTTGATCAAGTCAAGAGACCTTTCTCATTCCCGCAAGGACACAAGTACTTCTCCAACAAGAACTGAGAGCTACAGGAACAAGAACTAGCGGGACAAGAACTTAGTCAACACGAACAGCTACTGCAAGAGCGGCCTCTTGCCCTTGGACCACTCAAAATCAGGGAGCCACAAGGTTCGGATCCGTAGTAGTCTTTTCTTCTTCTTCCTATTCATTTGTTCTTTTTCTTCCTTTAACTGAAAACCTTTAACTGCGTTTTCTTGTTGGACTGATTACAATTGTATCTAGTAGAGCCAAAAAAGAATTTCGTCGTGAATCAACCCTCCATTTTCCAACCCCATCATCATTCCTTCACAATTATTGTGCAGAATTGCAGATTGTCTCACAGAAGAATGGACACATTAACTTTGAGGAAAAAGGTACAGAGGAAAGCTAAAATCAGAGGGTTGTACAGCATCAAACTGGAAGCTCTTGACGAGATTGTTTCCTTTGTCTCTCGTTCCCATGGCTTCGAAGATGAAGCTATAGAATTTGTTCTTGACAATCTCCATGAAGAATCTTGTACTGTTCCTTCTTCTTTCATACTACGATTATATCTTCTTTGCAATTCACCTCATTCCTTTTCATGGACAGTTTCTTTGTTTTGGCTATTGTGGCAGTGAAATCTCCAATATTAGACAAGGATGCGGTGCATCGAGTTATCAGCATTATGGTTGCAGCTGATAAAGTGGGAGAAGAAAGTCCCAATACCATTACCAGTACATCTGCTCTTTGCATCATCAACGCTTTTGATATCCCCAAGTTTCGTTATGATCCCATAAAAAAGATCTTTCTGTATGGTTTTCTCCCATTTATATTTATTTTTAATAGTTGTTAAACTAAGCATACCTGGTTAAGCATATACCTTGGGCCAAGAAGTCAGCAAAATCTCTCATTCCCATGTGTTGTTGAATACTTGAACTAAAAAAAAACTACTAGTTGGGTTTTTGGGATAATTAGACGCGGATAACTAATGCAGCTCATTGCAAAAAAGAGAGATATAATGGATTTAACTGAGAACTATCATCATCAACATTCCTTTTCTCTGCACTTGAAATCACATGTTCTTGAACCATGTACATATATATTTTTAGGCACACAGAAAACCTTCCAATTCATGGAGATGCTTCTGCTAAAGCTGCTTTATATAGAGATAGGTTTCTTTTGCTTTCCCAAAGGCTCTCTCGAGATCAGCATTTCTCCAAACCTGCTTTTGACATTGGCATGTCTCATTTTGGAAGTTGTGAGGTACTCCATTTCTCTTGACCTATGAATTGATCATGTTAGCCTTTACAATTGAACATGAGCATTTACACTAATTTTGTTTGTGATGTGTTTCCCAGATTTCTCCTATTCAATCTTTGGTGGGGCAAACAGGGAGAAAATGGGTCATGGGAGTGATCTCTCAAATGGAGGATGGCCACTTCTACTTGGAAGACCTTACCGCATCTGTGGAAATTAATTTATCTAGTGCTATATCCTTTACTGGCAACTTCTATGATGTGGAAAAATCTGAACTTGTTTGATATTTGAAGATGACATGCCCTGCAGTTTTCATTAATAGTTAGCACAAGATAACTACAGGTCTATTTACAGAGAACACCATTATTGTAGCTGAAGGAGAGATGCTCGTGGAGGGTATTTTTCAGGTTTGTAGTACCACGTTTGCCTTCAAGTTCTGTATAAATAGGTGGTTGAAATTTCCCCTTAGTGTCCTATTAGGTATTTCTAAACCCCCTTGTTTATAGAGAGAACTTACTTTCTTAAAGACATATGTAGCGTTCATTATTCTATTTTCTCTACGGATCATCCAGTTTTCCTATTAGCTGTTGCCAGGATGTACTTTGCTTACGAAGTTTTCATATTTGATCAGATTATTATGCTTGGTTACCCTTTTAAAAGGTATTATCTTTGCATATTTCCCTATATTCTTTTCAAAAAAGCTTTGCAGTTTTGGCACTTTTAATGTATAGCAGTATTTTGTTTATACTGTAACTGCTTCCTAAGTTGAACGCTTTTTGAAGTTCTTACATGCTTATGAGATGATTTTTTTTTTACAATGCTATGGGATGGATCTTAGTTCTGTTTGGTCCTGATCAGAGTTTTGTGTAAAGATACTACAGAAATATCTTGATATATTGCTATTCCTCAACGATTACAATATGAAAATACTATATGAAACAGTAAAATGATCGCGAATGATCAATCATCAAAATTACAGCCACTAATTACTGAAGTAAATCAACAGACAGAAATTCCACAAACATTCTTTCCAAACAATAACAATGGAAAATAAGAAAAAACACAAGAACCCGAACCCTCTGCTTTCCTTTCCTGCGCAAGGAGGAATGCAGCCTCTCTTCTTCTCCAGAAAATACTCGATACCTCCTTCCTTTTCTTTACTTTCTTTTATTATGATTTGCTAACTAACTACTGTGCCCCACCAGAGTGGTCCCCATCTTCATTACCACCTCCTACACTCCCACGTGTGGCCTTACTGTTATTCTTATTTCTTCTACTATATTTAAACAATATTGGAGGCCTAGCATTTTGCATGCCTAAGTTATATTTCACGTAGTTCTCAATTGGTAAGTGGATAACACCATCTTGTAGTTGGTTATTTAATATTTCGTTAGGTATCCAGAAGTTGAAATTTACTTTTGAGAGATATGAAACCTTATTTTTGTAAACAATTTTTTTTTTTTTAGCGAGTTCCGCCCACAGTCTTCTCAAAAGGTTTTGAATCTTGATAACATGAGGTTGACATTTAAGCACAACAGATTTAAATATGCAAGTGTCCTGCCTTCATCCAAAGCATATTTACTATTCAAAATTGGATTTGCTTGTGGAATTTCATTCTTGTCCTTTACTTTCTTATTGTTTTCTAGCACAAGGATACTGATGGGATACCAGTTGTTCCCAATCCCAGTAGCTGAAAATCAAATACTACTGATATTACTAAGATGAAAATAACGATAATAACTACAGGACAATATCACCGAATTCGTTTATAGCCGATTCGATGGACACTCTTCCCTCTCCTGCTATCCTTTCTTTCAAGAATATACAGAAAGATAACTTCACCAAAAGAAAAGCTCCCAGTTCTCTCTTTCACTTCCTTATTTATATTCACTCCCCACCTACAGTGGTCCCCCTGTTTCATGTGTCGCTCCACTCATTGTGGTCCCCACATGCGGTTACATAACTAACTCCTCCTCCTGCTTCTCTTTCCTATTCTTTCTCCTACTGTATTGATGTATGATGGGTGGTCTAACATTGCATTCCCGGTCCAGTTTCACCTTGTCCTCAAGGTGGAAATCGGGGAAGGATTGCTGAAAGTCATCATAGTTTTCCCATGTTGCTTCATGATGCGGTAGACCCTTCCAACTCATTAAGACTTCCCATCCTCCTTTCTCGTTTTTCTGATAACCGAAGACCTCCTGAGGCACAGCTCTCCTTTTCCGCAGTGATACCTGCCTGTATGGCCTAATCTTTAGGAACACCTTATCGCCTTCTTCAAATTCGACATGTCTTCTCTTCATATCGGCACAACTCTTCATCTTTTCTTGGGCTATGCGTAAATGTTCCTTCAAAGCACCCAAGGCTACATCTCTTTCCTTAAGTTGCTCATCTAAAGCCGAGTTGGGAGTTTCACGATCTCCATAATATATCAGGGCTGGGGGTGTTCTTCCATAGACAGCTTGGAATGGTGACACGCCTAATGATCTTTGGAATGTAGTGTTATACCAGTATTCAGCCCAAGACAACCATTTCATCCAATCTTTCGGTTTTTGCCCACGGAAGCACCTTAAATAAATTTCTACAGATCTGTTGACCACCTCTGTCTATCCATCTGTCTAGGGTGGTATGCTGTGCTTCGGTTCAACTTCGTACCAGCTAAACGAAACAACTCTTTCAAAAAATGACTCAGAAAGATCTTGTCTCGGTCAGGGACAATTGACTGTGGAAAGCCATGCAGTCTTACAACCTCCCGAACAATTCAGCTACCATCTTAGCGTCAAAAGGATGTTTAAGGCCGAGGAAGTGAGCATATTTATTGAAGCAATCCACCACTACGAATATTACTTCAAACCCCATTGATTTAGGCAGTCCTTCAATAAAATCCATGGATATATCCTCCCATACTCTATTTGGTATCTCTAGGGGGGTCAATAATCCTGCAGGTGACAATGCTAAAGTCTTATTCCGCTGACACGTAATACATTCTTCGCAATATTTTTTAACGTGAGCTTTCATTCCCACCCAAAACAACTCTCCTGTCAGCCTCTTATACGTTCTTAAGAACCCGGAATGACCTCCTAGGGCCGAGTCATGATATGTGTGCATAATAATAGGTATCAATGAAGAATTCTTCGCAATCACTAATCTCCCTTTGTATCTCAGTATTCCTTGTTGCAGAGTGTAATTCTTTACCTTCTCCTCCCTCTGAATCCTGTTGATTATATCTTGCAAGTAGTCATTCTTGTTAACCTCCTCTCTGATTACCTTTATGTCCACCAAGGTGGGGGCTGTTAGTTGGTTAAGATGGACAGTTGGTGGCACTCGTGAAAGGGCATCTGCTGCCTTGTTTTCCAAGCCCGGTTTATACACCACCTCAAATGAATAACCCAACAATTTTGCAATCCACTTCTGATATTGCGGTTGTATGACTCTCTGTTCCAGAAAGAACTTAAGTGATCGCTGATCTGTCTCAACTATGAATGTCCTTCCTAACAAATAGGGTCGCCAACGTTGGACTATCAATACTACTGCCATTAATTCCCTCTCGTATACTGGTTTGGTTCGGTCTCGCAAGGCTAGTGTATGGCTATAAAAAGCAATTGGTCTCTTGTTCTGCATTAGCACTGCCCCTACCCCATAGCCTGACGCATCTGTATCTACTTCGAATGGTGCATTAAAATCTGGAAGAGCTAATATAGGCAAGGCCATCATTGCTCGTTGAAGCTTTTCAAACGCTTCTTGTGCTCCCTCATTCCATTTAAATGATCCCAGCTTCAGTAGTTGAGTTAGAGGTGCCGCTATGGACCCATAGTGCTGTACAAAACGGCGGTAGTAACCAGTCAACCCCAGAAACCCTCTAACTTCCCGAACATTTGTTGGAGTTGGCCGTTGCTTGATTGCTCTAATTTTTTCAGGATTGACTTCTACTCCCTTTCCTGACAATGTGTCCCAAATGCTCCACATTTTAGTACGCAAAGCTGCATTTCTTTCTATTAGCAAACAGTTTATGCCTCCTCAATTCTTCCAGAACTAATTCAATGTGCTGACAATGTTCCTCTAAGTTCCTACTATAGACCAGTATATCATCGAGGAAGACCAAGACGAACTTCCTCAAGTACGATCTAAAAACCGAATTCATTAGTGATTGGAAAGTTTCTGGTGCGTTTGTGAGTCCAAACGGCATCACCAAAAACTCATAATGTCCTTCGTGAGTTCTAAAGGCCGTTTTCTCTATATCTTGACTGCACATTCTAATTGATGATATCCCGCTTTCAAGTCAATTTTGGAGAATAGATTTGCACCATTTAGCTCGTCGAACAGTTCTTCCACAACAGGGATAGGAAACTTATCTGGAATAGTTATGTTATTGAGTGCCCTGTAGTCCACGCAGAATCGCCAACTTCCGTCCTTCTTGACCAATAATACGGGGCTTGAGTAGGGGCTTGTGCTGGGACGGATAATTCCTGAGGTTAGCATTTCGTCCACCAATTTTTCCATTTCCTCCTTCTGCTGAAAAGCATACCGATAAGGCCTGACATTCACCGGATCTGCCCCTCCCCTTACGTGTATATGATGTTCGATATCCCTTCTTGGAGGTAATTCTTTGGGCCAATCGAAAACGTCATTATACTGTTTCAAGGCTGTTAGTATGCTCTCAGGTATGTTATTACTCTCTTCTGGCTCTATCTCGGCTATGTGGGCTTCCAAGGTTCTGCACTCAATCAAGTATCCCATGTCTGACTCAGTCCACGATTTAGTTAAATTCTTCAAGCTCACTTGAGTTTTGGTTAGGCTTGGATCCCCTTTTATCACTATTTTTCTGTTGTCATGGAAAAATGACATGGTTAAGTTCTTTCAGTCCATCTCAGTCACTCCCAATGAGTGTAACCATTGCATCCCAAGTATCACGTCTACCCCTCCCAGTTCCAGTGGTAGGAAGTTTTCAAGGACTGTCCACCCATTGAGATCCAACTTTACTTTTTCACACACTCCCTTGCCTTTGATGGCTGTTCCTAACCCAAGTATTACCCCATAGTTAGAAGTATCCTTTGTGGGTAATTTCAGTGTCATCACTAGTCGGTCGGATATGAAATTGTGGGTGGCTCCGCAATCCACTAGCACGACAACCTCCTTACTTTGAATTGTTCCCCTTATCTTCATGGTACTCGGATTCGTCAATCCCACTACCGAGTTAATATATAACTCCACTACTTCCCCAAGGTCATTCTGCAACTCAATAGTTTTCAATTCCTTCAAGTCATACTCGTCTTCCTCAATAATTTCTTCCTCCACGTCGTCCGCTCTTACCACGAACATACATAACTCACGTATTTCCTTCACCCTGCATTTGTGCCTGGAGTAATACTTCTCATCACATTTGAAACAGAGTCCTTTCTCCCTCTTGGCCTGGAATTCTGCGTCGAAAAGCCGTTTGGATGGTCCTTCTTTCTTAATCTCCTTTGCCGGTGATCCCCTCAGTATGATTGTTCGTATCGAAAATACCGTGTTCTCCTTATTCCCCTGTTCTTTTATAATTGAATTTGTTTTGGCCGTATTATAGGGGTAATTTGGAACTTTCGCTCCAGAATAACCGGGTAAATTTGCTTATCTCCTCAGGATCTTCCAATGTTCCACCATTTGCGCGTATCTCATCATCTCCGCTAATCCCACGGGATTGCAGAATTCCATCTCCACCTTAATCCACGGTAACAGCCCTCCCATGAACGTCTCTTCCACAATCTTTTTCGGAATGTCCGATCGGTGCCACCCACTTATCGAATAGATTCCGGTATTCCTCTACACTTGATTCCTGCTGCTGAATACGTAAGAACCGACCATATAGGGAGCCTTCACGGGATGATCGAAACGGATCAATAATCGTTCTTTTAAGTTTAACCAACAGGTAAATTTGTCTCTCTCCTCCTGCGATCGATACCAGTTGAGTGTGGGGCCTTCAAAACTGATTGTAGCGACCGTGAGTTTTCAGAATTCGTCAGTTTGTGTATTTGAAAATACCTATCTGCACGGAATAGCCATGAATCTGGGTCATCTCCATTGAATACCGACATTTCAACTTTGTTGAATTTGTTTCGATCGTTGTTATCCCCATCGCCATCACCCTTCTTCTCCATCGTGTCATTTTTAGTTTCCTTACTTGCCGAACTCTCTCCCTCCGCCGATTTTCCCGTCCATGTTTCTTGTGCCGACGAATCGATTCGTTTACCGCTCGCTAATACTCGTTCCTTGGCCATCGTCTCCATGAATATCATCACCATCTGGTGTGTTTTCTCCACTTGGGCCTGAAGGTTTTCCATGTTTTGTGACATCACCGTAAGCTTCTCTTCCATCACCGGAATTTTGTTGAGTTCTTGTTCGTGTGTGTCCCTTCTCTCTTCACTTCTGGTTTGAACCATGTTTTCCCACTTATTTCGAATCGACGTGCTCTGATACCAAGTTGATGGGATACCAGTTGTTCTCAATCCCAGTAGCCGAAAATCAAATACTACTGATATTACTAAGATGAAAATAATGATAATAACTACAGGACAATATCACCGAATTGGTTTATAGCCGATTCGATGGACACTCTTCCCTCTCCTGCTATCCTTTCTTTCAAGAATATACAGAAAGATAACTTCACCAAAAGAAAAGCTCCCTGTTCTCTCTTTCACTCCCTTATTTATATTCACTCCCCACCTACAGTGGTCCCCCTGTTTCATGTGTCGCTCCACTCATTGTGGTCCCCACATGCGGTTACATAACTAACTCCTCCTCCTGCTTCTCTTTCCTATTCTTTCTCCTACTGTATTGATGTATGATGGGTGGTCTAACAGATACCTTCCTACTCAAACGTTTTGGAAAATGTTCAGAACTTGTTTCATTGAAGTGTTTCAAATACTCTTCATCGTATTAATTATGTGTTTTTCCTGGGTGTCTATTTAGGTTGTTACGTGTGGATTTCCTCCATTAGAGGAAAGGGGCAAGTCTCTTAAATTGCTAGCAGGCCAGGACTTCTTTGGCGATGGTGTGCTACCTAAAGAGGAGACTGTATCCTCTTGTTTTGGTCTATAAAATGAATTTCTAAATAAGCATTGGAAAGGAGGGCTATAGTTGACATTTTATTGTGCTGAATTTTGGTTATTAAAGGGGTGTAAGTGCAATCAAGTTTTCCTTAATCATCAATAGCTCAGGCGTGCAGATCTGGAGAAGAAAGCAGTTAATGATATGTTTGTCATACTCTCTGACATTTGGTTGGATAGTGAAGAGGTGACAAATAGCCTTTTTATGTTTCATGTGTATTGTGTGTCTATAAAGCTTGGTGGCCTTATTAAAACTTTTTCATGTGGTAGGCCATGGGAAAACTGGAGACCATACTTGATGGTTTCGAGAATGTGGAAGTGGTTCCTTCCTTGTTTGTTTTGATGGGGAATTTTTGTTCCCATCCTTGTAATATTGCCTTTAATTCTTTCTCAAGTCTCAGGTATGTATTATCGCAATTGTTTCTGTGTTATTGAGATGAGTTCAGTGCAATAATGAGTTCAAATGTGCAGACTACAGTTTGGTAAGTTAGGAAAAATGATAGCAGCTCATCCACGATTAAATGAGCATAGCAAGTTTCTTTTTATTCCTGGTCCAGATGATGCAGGTTTGTGTTGTTATCTGTTAAGAAACTCCTCACTATGCACTATATTTTCTGAGATTTTATTTACATGGAGTTTATAGGGCCATCAACAGTTCTACCTAGGTGTGCTTTGCCGAAGTATTTAACCGAAGAGCTTCAAATGCATGTTTCAAATGCCATTTTCTCAAGTAACCCTTGCAGGTGAATACTTTGATTGCTGACTTGTAACCTTAATGGTGCTTCTAGTCTTGACTATAATATTATGTTGCATGAGGGGCTTCACTTCTACAGCTTACTTGTGAAATAAATCATTTTTTTTATTTGGAATAATTTAATAGATTTAAAGGCCAGTGTTATTGGTATGGATTTAGTTATCCAGTTTTTTTAACTATTGAATTTAGGGGGGAAAAGGTCATTTATTAACAAGTGAGAACAAAGCTACGATGAGCAAAATAAATGGTCCTCTACAAGGCGTTCTATTTTTTACTTAATTAAGAGGAATTAACCGATTTTAAGATGAGATTATGCTCCCTTTGGTGAATGCGATGCCTTTTACAGTCCTTTGGTGAATGCTATGCCTTTTACAGTCCTTTGGTGAATGCTATGCCTTTTACAGTCCTTTGGTGAATGCTATGCCTTTTACAGTCCTTTGGTGAATGCTATGCCTTTTACAGTTTTACTCCATAGTGGTGGATAATTGTCATACTTGAATGCAGGGTCAGATTCTACACTCAGGAAATTGTATTTTTCCGACAGGACTTGCTTTATAGAATGCGTCGTTCCTGTCTCATACCACCTTCCACAGAAGAAACAAGCGATCCTTTTGAGCATGTGAATTTTTTTTCTTTGCCTTTTACATTTCTGTTTTTTTTTTCTAGTTCTCTGTTTATGGATTCTACACCCTTTCGGATATTTATATATGAAGGCCTTAAGTTTTCATGATTCTCTTGCAGCTTGTTGCCACCATAACTCATCAAAGTCATCTCTGTCCTCTTCCTCTGGTTATTCAACCAATTATCTGGAATTACGACCACTGTCTTCATCTATATCCTACTCCTCATGTGGTACTTACCCATATCTCAATCTAGTGTTTTAATCGATCTATTTATACATCCAAAGTTGGATGTTCTTTCTCTCCACACCTGGAGACAGATAATGAATGAGGGTTCCGATGAATGATAAGTGTTCTACTGCGATTGAACTTTCAGATTATTATATCAATCTTTATTTGGTTTATGCAGATAGTGTTGGGGGATAGAAGTAAGCAACAAGCGTTCAAATACACAGGAATCACTTGCTTTAATCCTGGTTCCTTCACAAATGATAGCACTTTTGTGGCATATCGTCCATGCAATCAAGAAGTTGAACTGTCTGCCCTGTAAATTATTACAAAGTTTAGGCCAGATTCAAGCGGGCACACTCCTTTATGCAGCATAACAATTCGTTTAGAACATGAATGAGAAATCCTATAGCATCATTCTTTATCTTGGGAGTTGCACTATTCTTTATCTTGGGAGTTGCACTGGTGCACACCAAGAATTACCACTAGCTAGAATCTAACTCTATGCCGAAGAAGGCTTTTGTGATTTCTGTTTAGGAAAAAGTCGAAACATTGATGCAGAGTTAGGAATCTTTTTAGTTGTACAATTGTAAATCCGAATAACATATATTTTCTTTTAGATTATGTACTTTCTAACCGTGGACGATGGATTGATCAACAACTAACCTAAAAGTTCTTCACCCACCTGATGGATTTTTTTTTTTTTAGAGAAAAAGATAATTAGTTCATGCCTTATAGTGCATGTTATGTTATAATGTTATTCAAGATCAGATCATGAATACAGGTTAAGCATAATGAGGGATTTTTTATTTTTATTTTTTGGTAAGTGGTTGCCCATACTTTCAGAGAGTTGCTGAAGTGTGTAGAGCAGG

mRNA sequence

AAGAACAAAACAAGAAATATTTATATGTTTCTATTCTATTTGTTTCAAGAAATAACTTATTTCTAAAAAAATAGGAAGAAAGTTGGAGAAAAAGTGAAGCAAAGTCTCAACCTAGAAGAATGAGCAGAAAGATAGGAGAATAGGTTGAGCCTCAGCGACTGAAACAGGTACGGCAACTTCCCCAACTGCTGAAACCCGGATACAGGAAGGAGAAGAACGGCTACGTGGACTGAGGCAGCTTCTAATGGCGCCGACTGATGGTTTGTGCGTCTTCTTATTGAAGTGTGAAATATGAGCTACTTGCTGACTCCCACTGGGTGGTAGGCTCTGGCCGGGTACCAAGAATTGAGTGAATATAGTGGGTTGGAAATCTTTGATCAAGTCAAGAGACCTTTCTCATTCCCGCAAGGACACAAGTACTTCTCCAACAAGAACTGAGAGCTACAGGAACAAGAACTAGCGGGACAAGAACTTAGTCAACACGAACAGCTACTGCAAGAGCGGCCTCTTGCCCTTGGACCACTCAAAATCAGGGAGCCACAAGAATTGCAGATTGTCTCACAGAAGAATGGACACATTAACTTTGAGGAAAAAGGTACAGAGGAAAGCTAAAATCAGAGGGTTGTACAGCATCAAACTGGAAGCTCTTGACGAGATTGTTTCCTTTGTCTCTCGTTCCCATGGCTTCGAAGATGAAGCTATAGAATTTGTTCTTGACAATCTCCATGAAGAATCTTTGAAATCTCCAATATTAGACAAGGATGCGGTGCATCGAGTTATCAGCATTATGGTTGCAGCTGATAAAGTGGGAGAAGAAAGTCCCAATACCATTACCAGTACATCTGCTCTTTGCATCATCAACGCTTTTGATATCCCCAAGCACACAGAAAACCTTCCAATTCATGGAGATGCTTCTGCTAAAGCTGCTTTATATAGAGATAGGTTTCTTTTGCTTTCCCAAAGGCTCTCTCGAGATCAGCATTTCTCCAAACCTGCTTTTGACATTGGCATGTCTCATTTTGGAAGTTGTGAGATTTCTCCTATTCAATCTTTGGTGGGGCAAACAGGGAGAAAATGGGTCATGGGAGTGATCTCTCAAATGGAGGATGGCCACTTCTACTTGGAAGACCTTACCGCATCTGTGGAAATTAATTTATCTAGTGCTATATCCTTTACTGGCAACTTCTATGATGTGGAAAAATCTGAACTTGTTTGATATTTGAAGATGACATGCCCTGCAGTTTTCATTAATAGTTAGCACAAGATAACTACAGGTCTATTTACAGAGAACACCATTATTGTAGCTGAAGGAGAGATGCTCGTGGAGGGTATTTTTCAGGTTGTTACGTGTGGATTTCCTCCATTAGAGGAAAGGGGCAAGTCTCTTAAATTGCTAGCAGGCCAGGACTTCTTTGGCGATGGTGTGCTACCTAAAGAGGAGACTCTCAGGCGTGCAGATCTGGAGAAGAAAGCAGTTAATGATATGTTTGTCATACTCTCTGACATTTGGTTGGATAGTGAAGAGGCCATGGGAAAACTGGAGACCATACTTGATGGTTTCGAGAATGTGGAAGTGGTTCCTTCCTTGTTTGTTTTGATGGGGAATTTTTGTTCCCATCCTTGTAATATTGCCTTTAATTCTTTCTCAAGTCTCAGGTATGTATTATCGCAATTGTTTCTGTGTTATTGAGATGAGTTCAGTGCAATAATGAGTTCAAATGTGCAGACTACAGTTTGGTAAGTTAGGAAAAATGATAGCAGCTCATCCACGATTAAATGAGCATAGCAAGTTTCTTTTTATTCCTGGTCCAGATGATGCAGGTTTGTGTTGTTATCTGTTAAGAAACTCCTCACTATGCACTATATTTTCTGAGATTTTATTTACATGGAGTTTATAGGGCCATCAACAGTTCTACCTAGGTGTGCTTTGCCGAAGTATTTAACCGAAGAGCTTCAAATGCATGTTTCAAATGCCATTTTCTCAAGTAACCCTTGCAGGGTCAGATTCTACACTCAGGAAATTGTATTTTTCCGACAGGACTTGCTTTATAGAATGCGTCGTTCCTGTCTCATACCACCTTCCACAGAAGAAACAAGCGATCCTTTTGAGCATCTTGTTGCCACCATAACTCATCAAAGTCATCTCTGTCCTCTTCCTCTGGTTATTCAACCAATTATCTGGAATTACGACCACTGTCTTCATCTATATCCTACTCCTCATGTGATAGTGTTGGGGGATAGAAGTAAGCAACAAGCGTTCAAATACACAGGAATCACTTGCTTTAATCCTGGTTCCTTCACAAATGATAGCACTTTTGTGGCATATCGTCCATGCAATCAAGAAGTTGAACTGTCTGCCCTGTAAATTATTACAAAGTTTAGGCCAGATTCAAGCGGGCACACTCCTTTATGCAGCATAACAATTCGTTTAGAACATGAATGAGAAATCCTATAGCATCATTCTTTATCTTGGGAGTTGCACTATTCTTTATCTTGGGAGTTGCACTGGTGCACACCAAGAATTACCACTAGCTAGAATCTAACTCTATGCCGAAGAAGGCTTTTGTGATTTCTGTTTAGGAAAAAGTCGAAACATTGATGCAGAGTTAGGAATCTTTTTAGTTGTACAATTGTAAATCCGAATAACATATATTTTCTTTTAGATTATGTACTTTCTAACCGTGGACGATGGATTGATCAACAACTAACCTAAAAGTTCTTCACCCACCTGATGGATTTTTTTTTTTTTAGAGAAAAAGATAATTAGTTCATGCCTTATAGTGCATGTTATGTTATAATGTTATTCAAGATCAGATCATGAATACAGGTTAAGCATAATGAGGGATTTTTTATTTTTATTTTTTGGTAAGTGGTTGCCCATACTTTCAGAGAGTTGCTGAAGTGTGTAGAGCAGG

Coding sequence (CDS)

ATGGACACATTAACTTTGAGGAAAAAGGTACAGAGGAAAGCTAAAATCAGAGGGTTGTACAGCATCAAACTGGAAGCTCTTGACGAGATTGTTTCCTTTGTCTCTCGTTCCCATGGCTTCGAAGATGAAGCTATAGAATTTGTTCTTGACAATCTCCATGAAGAATCTTTGAAATCTCCAATATTAGACAAGGATGCGGTGCATCGAGTTATCAGCATTATGGTTGCAGCTGATAAAGTGGGAGAAGAAAGTCCCAATACCATTACCAGTACATCTGCTCTTTGCATCATCAACGCTTTTGATATCCCCAAGCACACAGAAAACCTTCCAATTCATGGAGATGCTTCTGCTAAAGCTGCTTTATATAGAGATAGGTTTCTTTTGCTTTCCCAAAGGCTCTCTCGAGATCAGCATTTCTCCAAACCTGCTTTTGACATTGGCATGTCTCATTTTGGAAGTTGTGAGATTTCTCCTATTCAATCTTTGGTGGGGCAAACAGGGAGAAAATGGGTCATGGGAGTGATCTCTCAAATGGAGGATGGCCACTTCTACTTGGAAGACCTTACCGCATCTGTGGAAATTAATTTATCTAGTGCTATATCCTTTACTGGCAACTTCTATGATGTGGAAAAATCTGAACTTGTTTGA

Protein sequence

MDTLTLRKKVQRKAKIRGLYSIKLEALDEIVSFVSRSHGFEDEAIEFVLDNLHEESLKSPILDKDAVHRVISIMVAADKVGEESPNTITSTSALCIINAFDIPKHTENLPIHGDASAKAALYRDRFLLLSQRLSRDQHFSKPAFDIGMSHFGSCEISPIQSLVGQTGRKWVMGVISQMEDGHFYLEDLTASVEINLSSAISFTGNFYDVEKSELV

Homology

[Close]

BLAST of CsGy1G020700 vs. NCBI nr
Match: KGN65523.1 (hypothetical protein Csa_1G434690 [Cucumis sativus])

HSP 1 Score: 414.8 bits (1065), Expect = 1.7e-112
Identity = 215/226 (95.13%), Postives = 215/226 (95.13%), Query Frame = 0


Query: 1   MDTLTLRKKVQRKAKIRGLYSIKLEALDEIVSFVSRSHGFEDEAIEFVLDNLHEESLKSP 60
           MDTLTLRKKVQRKAKIRGLYSIKLEALDEIVSFVSRSHGFEDEAIEFVLDNLHEESLKSP
Sbjct: 1   MDTLTLRKKVQRKAKIRGLYSIKLEALDEIVSFVSRSHGFEDEAIEFVLDNLHEESLKSP 60

Query: 61  ILDKDAVHRVISIMVAADKVGEESPNTITSTSALCIINAFDIPK-----------HTENL 120
           ILDKDAVHRVISIMVAADKVGEESPNTITSTSALCIINAFDIPK           HTENL
Sbjct: 61  ILDKDAVHRVISIMVAADKVGEESPNTITSTSALCIINAFDIPKFRYDPIKKIFLHTENL 120

Query: 121 PIHGDASAKAALYRDRFLLLSQRLSRDQHFSKPAFDIGMSHFGSCEISPIQSLVGQTGRK 180
           PIHGDASAKAALYRDRFLLLSQRLSRDQHFSKPAFDIGMSHFGSCEISPIQSLVGQTGRK
Sbjct: 121 PIHGDASAKAALYRDRFLLLSQRLSRDQHFSKPAFDIGMSHFGSCEISPIQSLVGQTGRK 180

Query: 181 WVMGVISQMEDGHFYLEDLTASVEINLSSAISFTGNFYDVEKSELV 216
           WVMGVISQMEDGHFYLEDLTASVEINLSSAISFTGNFYDVEKSELV
Sbjct: 181 WVMGVISQMEDGHFYLEDLTASVEINLSSAISFTGNFYDVEKSELV 226

[Close]

BLAST of CsGy1G020700 vs. NCBI nr
Match: XP_011657177.1 (PREDICTED: DNA polymerase epsilon subunit 2 [Cucumis sativus])

HSP 1 Score: 386.0 bits (990), Expect = 8.6e-104
Identity = 202/217 (93.09%), Postives = 202/217 (93.09%), Query Frame = 0


Query: 1   MDTLTLRKKVQRKAKIRGLYSIKLEALDEIVSFVSRSHGFEDEAIEFVLDNLHEESLKSP 60
           MDTLTLRKKVQRKAKIRGLYSIKLEALDEIVSFVSRSHGFEDEAIEFVLDNLHEESLKSP
Sbjct: 1   MDTLTLRKKVQRKAKIRGLYSIKLEALDEIVSFVSRSHGFEDEAIEFVLDNLHEESLKSP 60

Query: 61  ILDKDAVHRVISIMVAADKVGEESPNTITSTSALCIINAFDIPK-----------HTENL 120
           ILDKDAVHRVISIMVAADKVGEESPNTITSTSALCIINAFDIPK           HTENL
Sbjct: 61  ILDKDAVHRVISIMVAADKVGEESPNTITSTSALCIINAFDIPKFRYDPIKKIFLHTENL 120

Query: 121 PIHGDASAKAALYRDRFLLLSQRLSRDQHFSKPAFDIGMSHFGSCEISPIQSLVGQTGRK 180
           PIHGDASAKAALYRDRFLLLSQRLSRDQHFSKPAFDIGMSHFGSCEISPIQSLVGQTGRK
Sbjct: 121 PIHGDASAKAALYRDRFLLLSQRLSRDQHFSKPAFDIGMSHFGSCEISPIQSLVGQTGRK 180

Query: 181 WVMGVISQMEDGHFYLEDLTASVEINLSSAISFTGNF 207
           WVMGVISQMEDGHFYLEDLTASVEINLSSA   TG F
Sbjct: 181 WVMGVISQMEDGHFYLEDLTASVEINLSSAKITTGLF 217

[Close]

BLAST of CsGy1G020700 vs. NCBI nr
Match: XP_016899382.1 (PREDICTED: LOW QUALITY PROTEIN: DNA polymerase epsilon subunit 2 [Cucumis melo])

HSP 1 Score: 344.0 bits (881), Expect = 3.8e-91
Identity = 180/218 (82.57%), Postives = 191/218 (87.61%), Query Frame = 0


Query: 1   MDTLTLRKKVQRKAKIRGLYSIKLEALDEIVSFVSRSHGFEDEAIEFVLDNLHEESLKSP 60
           MD LTLRKKVQRKAKIRGLYSIKLEALDEIVSFVSR HGFED+AIE VLD+LHEESLKSP
Sbjct: 1   MDALTLRKKVQRKAKIRGLYSIKLEALDEIVSFVSRFHGFEDDAIELVLDDLHEESLKSP 60

Query: 61  ILDKDAVHRVISIMVAADKVGEESPNTITSTSALCIINAFDIPK------------HTEN 120
           IL+KD VHRVIS ++AA++  E SPNTITST+ALCII+AFDI K            HT +
Sbjct: 61  ILEKDGVHRVISKLLAAEEAEEASPNTITSTTALCIIDAFDISKFRYDPIKKIFHRHTGD 120

Query: 121 LPIHGDASAKAALYRDRFLLLSQRLSRDQHFSKPAFDIGMSHFGSCEISPIQSLVGQTGR 180
           LPIHGDA AKAALYRDRFLLLSQRLSRDQHFSKPAFDIGMSHFGSCEISPIQSLVGQTGR
Sbjct: 121 LPIHGDAPAKAALYRDRFLLLSQRLSRDQHFSKPAFDIGMSHFGSCEISPIQSLVGQTGR 180

Query: 181 KWVMGVISQMEDGHFYLEDLTASVEINLSSAISFTGNF 207
           KWVMGVISQMEDGHFYLEDLTASVEINLS+A   TG F
Sbjct: 181 KWVMGVISQMEDGHFYLEDLTASVEINLSNAKITTGLF 218

[Close]

BLAST of CsGy1G020700 vs. NCBI nr
Match: XP_023525784.1 (DNA polymerase epsilon subunit B [Cucurbita pepo subsp. pepo])

HSP 1 Score: 321.2 bits (822), Expect = 2.6e-84
Identity = 170/218 (77.98%), Postives = 186/218 (85.32%), Query Frame = 0


Query: 1   MDTLTLRKKVQRKAKIRGLYSIKLEALDEIVSFVSRSHGFEDEAIEFVLDNLHEESLKSP 60
           MD  TLR+KVQRK+KIRG YSIKL+AL EIVSF SR  G ED+AI+ VLD+LH+ESL+S 
Sbjct: 1   MDESTLRRKVQRKSKIRG-YSIKLDALAEIVSFASRFDGCEDDAIDLVLDHLHDESLQSS 60

Query: 61  ILDKDAVHRVISIMVAADKVGEESPNTITSTSALCIINAFDIPK------------HTEN 120
           I+DKDAVHRV+SI++AAD+ GEE P+T TSTSALCII+AFDI K            HT +
Sbjct: 61  IIDKDAVHRVVSILLAADEAGEECPDTSTSTSALCIIDAFDISKFRYDPIKKIFYMHTGS 120

Query: 121 LPIHGDASAKAALYRDRFLLLSQRLSRDQHFSKPAFDIGMSHFGSCEISPIQSLVGQTGR 180
           LPIHGDASAKAALYRDRFLLLSQRLSRDQHFSKPAFD GMSHFGSCEISPIQSLVGQTGR
Sbjct: 121 LPIHGDASAKAALYRDRFLLLSQRLSRDQHFSKPAFDTGMSHFGSCEISPIQSLVGQTGR 180

Query: 181 KWVMGVISQMEDGHFYLEDLTASVEINLSSAISFTGNF 207
           KWVMGVISQMEDGHFYLEDLTASVEINLSSA   TG F
Sbjct: 181 KWVMGVISQMEDGHFYLEDLTASVEINLSSAKITTGLF 217

[Close]

BLAST of CsGy1G020700 vs. NCBI nr
Match: XP_022998323.1 (DNA polymerase epsilon subunit B [Cucurbita maxima])

HSP 1 Score: 320.9 bits (821), Expect = 3.4e-84
Identity = 170/218 (77.98%), Postives = 186/218 (85.32%), Query Frame = 0


Query: 1   MDTLTLRKKVQRKAKIRGLYSIKLEALDEIVSFVSRSHGFEDEAIEFVLDNLHEESLKSP 60
           MD  TLR+KVQRK+KIRG YSIKL+AL EIVSF SR  G ED+AI+ VLD+LH+ESL+S 
Sbjct: 1   MDESTLRRKVQRKSKIRG-YSIKLDALAEIVSFASRFDGCEDDAIDLVLDHLHDESLQSS 60

Query: 61  ILDKDAVHRVISIMVAADKVGEESPNTITSTSALCIINAFDIPK------------HTEN 120
           I+DKDAVHRV+SI++AAD+ GEE P+T TSTSALCII+AFDI K            HT +
Sbjct: 61  IIDKDAVHRVVSILLAADEAGEECPDTSTSTSALCIIDAFDISKYRYDPIKKIFYMHTGS 120

Query: 121 LPIHGDASAKAALYRDRFLLLSQRLSRDQHFSKPAFDIGMSHFGSCEISPIQSLVGQTGR 180
           LPIHGDASAKAALYRDRFLLLSQRLSRDQHFSKPAFD GMSHFGSCEISPIQSLVGQTGR
Sbjct: 121 LPIHGDASAKAALYRDRFLLLSQRLSRDQHFSKPAFDSGMSHFGSCEISPIQSLVGQTGR 180

Query: 181 KWVMGVISQMEDGHFYLEDLTASVEINLSSAISFTGNF 207
           KWVMGVISQMEDGHFYLEDLTASVEINLSSA   TG F
Sbjct: 181 KWVMGVISQMEDGHFYLEDLTASVEINLSSAKITTGLF 217

[Close]

BLAST of CsGy1G020700 vs. TAIR10
Match: AT5G22110.1 (DNA polymerase epsilon subunit B2)

HSP 1 Score: 202.6 bits (514), Expect = 2.4e-52
Identity = 117/213 (54.93%), Postives = 151/213 (70.89%), Query Frame = 0


Query: 7   RKKVQRKAKIRGLYSIKLEALDEIVSFVSRSHGFED-EAIEFVLDNLHEESLKSPILDKD 66
           RKK+Q+K K RG Y++K +ALDEI+ F  +    +D EAI+ +LDNL +E+ KS  +D +
Sbjct: 8   RKKIQKKFKNRG-YNLKFDALDEILVFADQFPDDDDGEAIDLLLDNL-QETHKSSTVDAE 67

Query: 67  AVHRVISIMVAADKVGEESPNTITSTSALCIINAFDIPK------------HTENLPIHG 126
           +V  +I+ ++ A    EE     TS S+L II+AF +PK            HT +LPIHG
Sbjct: 68  SVRGLINRLLGAHNAPEE---PTTSASSLAIIDAFLVPKFGYDSVKKKFNEHTSSLPIHG 127

Query: 127 DASAKAALYRDRFLLLSQRLSRDQHFSKPAFDIGMSHFGSCEISPIQSLVGQTGRKWVMG 186
           +ASAK ALYR+RF+LLSQR+SR +HFS+PAFD  MS F + EIS IQSL+ Q GRKWVMG
Sbjct: 128 EASAKTALYRERFMLLSQRVSRAEHFSRPAFDAEMSQFENNEISSIQSLISQRGRKWVMG 187

Query: 187 VISQMEDGHFYLEDLTASVEINLSSAISFTGNF 207
           VISQ+EDGHFYLEDL+ASVEI+LS A   TG F
Sbjct: 188 VISQLEDGHFYLEDLSASVEIDLSKAKITTGFF 215

[Close]

BLAST of CsGy1G020700 vs. Swiss-Prot
Match: sp|Q500V9|DPB2_ARATH (DNA polymerase epsilon subunit B OS=Arabidopsis thaliana OX=3702 GN=DPB2 PE=1 SV=1)

HSP 1 Score: 202.6 bits (514), Expect = 4.4e-51
Identity = 117/213 (54.93%), Postives = 151/213 (70.89%), Query Frame = 0


Query: 7   RKKVQRKAKIRGLYSIKLEALDEIVSFVSRSHGFED-EAIEFVLDNLHEESLKSPILDKD 66
           RKK+Q+K K RG Y++K +ALDEI+ F  +    +D EAI+ +LDNL +E+ KS  +D +
Sbjct: 8   RKKIQKKFKNRG-YNLKFDALDEILVFADQFPDDDDGEAIDLLLDNL-QETHKSSTVDAE 67

Query: 67  AVHRVISIMVAADKVGEESPNTITSTSALCIINAFDIPK------------HTENLPIHG 126
           +V  +I+ ++ A    EE     TS S+L II+AF +PK            HT +LPIHG
Sbjct: 68  SVRGLINRLLGAHNAPEE---PTTSASSLAIIDAFLVPKFGYDSVKKKFNEHTSSLPIHG 127

Query: 127 DASAKAALYRDRFLLLSQRLSRDQHFSKPAFDIGMSHFGSCEISPIQSLVGQTGRKWVMG 186
           +ASAK ALYR+RF+LLSQR+SR +HFS+PAFD  MS F + EIS IQSL+ Q GRKWVMG
Sbjct: 128 EASAKTALYRERFMLLSQRVSRAEHFSRPAFDAEMSQFENNEISSIQSLISQRGRKWVMG 187

Query: 187 VISQMEDGHFYLEDLTASVEINLSSAISFTGNF 207
           VISQ+EDGHFYLEDL+ASVEI+LS A   TG F
Sbjct: 188 VISQLEDGHFYLEDLSASVEIDLSKAKITTGFF 215

[Close]

BLAST of CsGy1G020700 vs. Swiss-Prot
Match: sp|Q54Y85|DPOE2_DICDI (DNA polymerase epsilon subunit 2 OS=Dictyostelium discoideum OX=44689 GN=pole2 PE=3 SV=1)

HSP 1 Score: 90.9 bits (224), Expect = 1.9e-17
Identity = 64/207 (30.92%), Postives = 114/207 (55.07%), Query Frame = 0


Query: 7   RKKVQRKAKIRGLYSIKLEALDEIVSFVSRSHGFEDEAIEFVLDNLHEESLKSPILDK-D 66
           +K++ +   + G +SIK +A+  I++ + ++ G++   I  ++DNL +   KS  L   +
Sbjct: 6   KKQITKSFSLTG-FSIKADAMKCIINRI-KNEGYD---ITQLIDNLLKNLDKSQYLQTIE 65

Query: 67  AVHRVISIMVAADKVGEESPNTITSTSALCIINAFDIPK-----------HTENL--PIH 126
              ++I  + ++D + +E         AL +I+AF+ P             +EN    +H
Sbjct: 66  GCFKLIDTINSSDAIEKE---------ALKVIDAFNTPLFNFDSNSKQFIKSENFDRSLH 125

Query: 127 GDASAKAALYRDRFLLLSQRLSRDQHFSKPAFDIGMSHFGSCEISPIQSLVGQTGRKWVM 186
           G +++K+ LYR R+L + QR  R+ +FS P             I+P+ SL+G TGRK V+
Sbjct: 126 GSSNSKSDLYRKRYLKVLQRTERNDYFSTPVLASDKLKNEYQTITPLSSLLGNTGRKHVL 185

Query: 187 GVISQMEDGHFYLEDLTASVEINLSSA 200
           G ISQ+E+  FY+EDL  +V+I++S A
Sbjct: 186 GTISQIEEDQFYIEDLNTNVKIDISKA 198

[Close]

BLAST of CsGy1G020700 vs. Swiss-Prot
Match: sp|A7YWS7|DPOE2_BOVIN (DNA polymerase epsilon subunit 2 OS=Bos taurus OX=9913 GN=POLE2 PE=2 SV=1)

HSP 1 Score: 76.6 bits (187), Expect = 3.7e-13
Identity = 62/220 (28.18%), Postives = 111/220 (50.45%), Query Frame = 0


Query: 6   LRKKVQRKAKIRGLYSIKLEALDEIVSFVSRSHGFE-DEAIEFVLDNLHEESLKSPILDK 65
           LR +     K+RGL  ++ EA+  +   +   +  E ++A+E ++D + ++ L S ++++
Sbjct: 6   LRSRALSAFKLRGL-MLRGEAVKYLTEALQSINEIELEDALEKIIDAVEKQPLSSNMIER 65

Query: 66  DAVHRVISIMVAADKVGEESPNTITSTSALCIINAFDIPKHTEN------LP-------- 125
             V    ++   +  V E      T      II AFDIP+   N      LP        
Sbjct: 66  SVVE--AAVQECSQSVDE------TIDHIFNIIGAFDIPRFVYNSERKKFLPLLMTNHPA 125

Query: 126 --IHGDASAKAALYRDRFLLLSQRLSRDQHFSKPAFDIGMSHFGS-CEISPIQSLVGQT- 185
             + G A  KA L+R+R+ +L QR  R + F+ P         GS  ++  I++L+G T 
Sbjct: 126 PNLFGTARDKAELFRERYTILHQRTHRHELFTPPVIGSHPDESGSKFQLKTIETLLGSTS 185

Query: 186 --GRKWVMGVISQMEDGHFYLEDLTASVEINLSSAISFTG 205
             G   V+G+I+Q+++G F+LED T +++++LS A   +G
Sbjct: 186 KIGDVIVLGMITQLKEGKFFLEDPTGTIQLDLSKAQFHSG 216

[Close]

BLAST of CsGy1G020700 vs. Swiss-Prot
Match: sp|O54956|DPOE2_MOUSE (DNA polymerase epsilon subunit 2 OS=Mus musculus OX=10090 GN=Pole2 PE=2 SV=2)

HSP 1 Score: 72.8 bits (177), Expect = 5.3e-12
Identity = 62/220 (28.18%), Postives = 106/220 (48.18%), Query Frame = 0


Query: 6   LRKKVQRKAKIRGLYSIKLEALDEIVSFVSRSHGFE-DEAIEFVLDNLHEESLKSPILDK 65
           LR +     K+RGL  ++ EA   +   +      E +E +  ++D + ++ L S ++++
Sbjct: 6   LRSRTVSAFKLRGLL-LRSEATKYLTEALQSVTELELEENLGKIIDAVEKQPLSSNMIER 65

Query: 66  DAVHRVISIMVAADKVGEESPNTITSTSALCIINAFDIPKHTEN------LP-------- 125
             V        A  +  +    TI       II AFDIP+   N      LP        
Sbjct: 66  SVVE------AAVQECSQSMDETI--EHVFNIIGAFDIPRFIYNSERKKFLPLSMTNHAA 125

Query: 126 --IHGDASAKAALYRDRFLLLSQRLSRDQHFSKPAFDIGMSHFGS-CEISPIQSLVGQT- 185
             + G A  KA LY +R+ +L QR  R + F+ P     +   GS  ++  I++L+G T 
Sbjct: 126 PTLFGTARDKAELYLERYTILHQRTHRHELFTPPVIGSHLEESGSKFQLKTIETLLGSTS 185

Query: 186 --GRKWVMGVISQMEDGHFYLEDLTASVEINLSSAISFTG 205
             G   V+G+I+Q+++G F+LED T +V+++LS A   +G
Sbjct: 186 KVGDVIVLGMITQLKEGKFFLEDPTGTVQLDLSKAQFHSG 216

[Close]

BLAST of CsGy1G020700 vs. Swiss-Prot
Match: sp|P56282|DPOE2_HUMAN (DNA polymerase epsilon subunit 2 OS=Homo sapiens OX=9606 GN=POLE2 PE=1 SV=2)

HSP 1 Score: 70.9 bits (172), Expect = 2.0e-11
Identity = 59/220 (26.82%), Postives = 108/220 (49.09%), Query Frame = 0


Query: 6   LRKKVQRKAKIRGLYSIKLEALDEIVSFVSRSHGFE-DEAIEFVLDNLHEESLKSPILDK 65
           LR +     K+RGL  ++ EA+  +   +      E ++ +E +++ + ++ L S ++++
Sbjct: 6   LRSRALSAFKLRGLL-LRGEAIKYLTEALQSISELELEDKLEKIINAVEKQPLSSNMIER 65

Query: 66  DAVHRVISIMVAADKVGEESPNTITSTSALCIINAFDIPKHTEN------LP-------- 125
             V    ++   +  V E      T      II AFDIP+   N      LP        
Sbjct: 66  SVVE--AAVQECSQSVDE------TIEHVFNIIGAFDIPRFVYNSERKKFLPLLMTNHPA 125

Query: 126 --IHGDASAKAALYRDRFLLLSQRLSRDQHFSKPAFDIGMSHFGS-CEISPIQSLVGQT- 185
             + G    KA ++R+R+ +L QR  R + F+ P         GS  ++  I++L+G T 
Sbjct: 126 PNLFGTPRDKAEMFRERYTILHQRTHRHELFTPPVIGSHPDESGSKFQLKTIETLLGSTT 185

Query: 186 --GRKWVMGVISQMEDGHFYLEDLTASVEINLSSAISFTG 205
             G   V+G+I+Q+++G F+LED T +V+++LS A   +G
Sbjct: 186 KIGDAIVLGMITQLKEGKFFLEDPTGTVQLDLSKAQFHSG 216

[Close]

BLAST of CsGy1G020700 vs. TrEMBL
Match: tr|A0A0A0LUV9|A0A0A0LUV9_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_1G434690 PE=4 SV=1)

HSP 1 Score: 414.8 bits (1065), Expect = 1.1e-112
Identity = 215/226 (95.13%), Postives = 215/226 (95.13%), Query Frame = 0


Query: 1   MDTLTLRKKVQRKAKIRGLYSIKLEALDEIVSFVSRSHGFEDEAIEFVLDNLHEESLKSP 60
           MDTLTLRKKVQRKAKIRGLYSIKLEALDEIVSFVSRSHGFEDEAIEFVLDNLHEESLKSP
Sbjct: 1   MDTLTLRKKVQRKAKIRGLYSIKLEALDEIVSFVSRSHGFEDEAIEFVLDNLHEESLKSP 60

Query: 61  ILDKDAVHRVISIMVAADKVGEESPNTITSTSALCIINAFDIPK-----------HTENL 120
           ILDKDAVHRVISIMVAADKVGEESPNTITSTSALCIINAFDIPK           HTENL
Sbjct: 61  ILDKDAVHRVISIMVAADKVGEESPNTITSTSALCIINAFDIPKFRYDPIKKIFLHTENL 120

Query: 121 PIHGDASAKAALYRDRFLLLSQRLSRDQHFSKPAFDIGMSHFGSCEISPIQSLVGQTGRK 180
           PIHGDASAKAALYRDRFLLLSQRLSRDQHFSKPAFDIGMSHFGSCEISPIQSLVGQTGRK
Sbjct: 121 PIHGDASAKAALYRDRFLLLSQRLSRDQHFSKPAFDIGMSHFGSCEISPIQSLVGQTGRK 180

Query: 181 WVMGVISQMEDGHFYLEDLTASVEINLSSAISFTGNFYDVEKSELV 216
           WVMGVISQMEDGHFYLEDLTASVEINLSSAISFTGNFYDVEKSELV
Sbjct: 181 WVMGVISQMEDGHFYLEDLTASVEINLSSAISFTGNFYDVEKSELV 226

[Close]

BLAST of CsGy1G020700 vs. TrEMBL
Match: tr|A0A1S4DTQ5|A0A1S4DTQ5_CUCME (DNA polymerase epsilon subunit OS=Cucumis melo OX=3656 GN=LOC103501415 PE=3 SV=1)

HSP 1 Score: 344.0 bits (881), Expect = 2.5e-91
Identity = 180/218 (82.57%), Postives = 191/218 (87.61%), Query Frame = 0


Query: 1   MDTLTLRKKVQRKAKIRGLYSIKLEALDEIVSFVSRSHGFEDEAIEFVLDNLHEESLKSP 60
           MD LTLRKKVQRKAKIRGLYSIKLEALDEIVSFVSR HGFED+AIE VLD+LHEESLKSP
Sbjct: 1   MDALTLRKKVQRKAKIRGLYSIKLEALDEIVSFVSRFHGFEDDAIELVLDDLHEESLKSP 60

Query: 61  ILDKDAVHRVISIMVAADKVGEESPNTITSTSALCIINAFDIPK------------HTEN 120
           IL+KD VHRVIS ++AA++  E SPNTITST+ALCII+AFDI K            HT +
Sbjct: 61  ILEKDGVHRVISKLLAAEEAEEASPNTITSTTALCIIDAFDISKFRYDPIKKIFHRHTGD 120

Query: 121 LPIHGDASAKAALYRDRFLLLSQRLSRDQHFSKPAFDIGMSHFGSCEISPIQSLVGQTGR 180
           LPIHGDA AKAALYRDRFLLLSQRLSRDQHFSKPAFDIGMSHFGSCEISPIQSLVGQTGR
Sbjct: 121 LPIHGDAPAKAALYRDRFLLLSQRLSRDQHFSKPAFDIGMSHFGSCEISPIQSLVGQTGR 180

Query: 181 KWVMGVISQMEDGHFYLEDLTASVEINLSSAISFTGNF 207
           KWVMGVISQMEDGHFYLEDLTASVEINLS+A   TG F
Sbjct: 181 KWVMGVISQMEDGHFYLEDLTASVEINLSNAKITTGLF 218

[Close]

BLAST of CsGy1G020700 vs. TrEMBL
Match: tr|A0A2I4GYY1|A0A2I4GYY1_9ROSI (DNA polymerase epsilon subunit OS=Juglans regia OX=51240 GN=LOC109012089 PE=3 SV=1)

HSP 1 Score: 270.4 bits (690), Expect = 3.5e-69
Identity = 140/225 (62.22%), Postives = 176/225 (78.22%), Query Frame = 0


Query: 1   MDTLTLRKKVQRKAKIRGLYSIKLEALDEIVSFVSRSHGFEDEAIEFVLDNLHEESLKSP 60
           M++ T+RKKV+RK KIRG Y++K+EALDEI+SFV+R  G +D+A++ +LD L  ESLKS 
Sbjct: 1   MNSSTIRKKVERKCKIRG-YTLKVEALDEILSFVNRFQGAQDDALDLLLDQLEHESLKSS 60

Query: 61  ILDKDAVHRVISIMVAADKVGEESPNTI-----TSTSALCIINAFDIPK----------- 120
           I+DKD VHRV+S+++ A+   E+ P+       +S S++ +I+AF +PK           
Sbjct: 61  IIDKDPVHRVVSLLLEAEAAAEDGPDIDGVTGGSSASSIRVIDAFLVPKFRYDPIKKIFY 120

Query: 121 -HTENLPIHGDASAKAALYRDRFLLLSQRLSRDQHFSKPAFDIGMSHFGSCEISPIQSLV 180
            HT  LPIHG+ASAKAALY+DRFL+L QRL+RDQHFSKPAFD  MSHFGSCEISPIQSLV
Sbjct: 121 EHTGGLPIHGEASAKAALYKDRFLMLFQRLARDQHFSKPAFDTEMSHFGSCEISPIQSLV 180

Query: 181 GQTGRKWVMGVISQMEDGHFYLEDLTASVEINLSSAISFTGNFYD 209
           GQTGR+WVMGVISQ+EDGHFYLEDLTASVEINLS+A   TG F +
Sbjct: 181 GQTGRRWVMGVISQLEDGHFYLEDLTASVEINLSNAKITTGFFLE 224

[Close]

BLAST of CsGy1G020700 vs. TrEMBL
Match: tr|A0A2I4GYY9|A0A2I4GYY9_9ROSI (DNA polymerase epsilon subunit OS=Juglans regia OX=51240 GN=LOC109012089 PE=3 SV=1)

HSP 1 Score: 270.4 bits (690), Expect = 3.5e-69
Identity = 140/225 (62.22%), Postives = 176/225 (78.22%), Query Frame = 0


Query: 1   MDTLTLRKKVQRKAKIRGLYSIKLEALDEIVSFVSRSHGFEDEAIEFVLDNLHEESLKSP 60
           M++ T+RKKV+RK KIRG Y++K+EALDEI+SFV+R  G +D+A++ +LD L  ESLKS 
Sbjct: 1   MNSSTIRKKVERKCKIRG-YTLKVEALDEILSFVNRFQGAQDDALDLLLDQLEHESLKSS 60

Query: 61  ILDKDAVHRVISIMVAADKVGEESPNTI-----TSTSALCIINAFDIPK----------- 120
           I+DKD VHRV+S+++ A+   E+ P+       +S S++ +I+AF +PK           
Sbjct: 61  IIDKDPVHRVVSLLLEAEAAAEDGPDIDGVTGGSSASSIRVIDAFLVPKFRYDPIKKIFY 120

Query: 121 -HTENLPIHGDASAKAALYRDRFLLLSQRLSRDQHFSKPAFDIGMSHFGSCEISPIQSLV 180
            HT  LPIHG+ASAKAALY+DRFL+L QRL+RDQHFSKPAFD  MSHFGSCEISPIQSLV
Sbjct: 121 EHTGGLPIHGEASAKAALYKDRFLMLFQRLARDQHFSKPAFDTEMSHFGSCEISPIQSLV 180

Query: 181 GQTGRKWVMGVISQMEDGHFYLEDLTASVEINLSSAISFTGNFYD 209
           GQTGR+WVMGVISQ+EDGHFYLEDLTASVEINLS+A   TG F +
Sbjct: 181 GQTGRRWVMGVISQLEDGHFYLEDLTASVEINLSNAKITTGFFLE 224

[Close]

BLAST of CsGy1G020700 vs. TrEMBL
Match: tr|A5AMH8|A5AMH8_VITVI (DNA polymerase epsilon subunit OS=Vitis vinifera OX=29760 GN=VITISV_038180 PE=3 SV=1)

HSP 1 Score: 266.9 bits (681), Expect = 3.9e-68
Identity = 140/209 (66.99%), Postives = 169/209 (80.86%), Query Frame = 0


Query: 7   RKKVQRKAKIRGLYSIKLEALDEIVSFVSRSHGFEDEAIEFVLDNLHEESLKSPILDKDA 66
           RKKVQRK KIRG Y++K+EALDEI+SF+S     EDEAI+ +LD L  ESLKS ILDK++
Sbjct: 6   RKKVQRKFKIRG-YTLKVEALDEILSFLSHFQDAEDEAIDLLLDELENESLKSSILDKES 65

Query: 67  VHRVISIMVAADKVGEESPNTITSTSALCIINAFDIPK------------HTENLPIHGD 126
           VHRV+S+++ A+   EE+P  I++ SAL I++AF + K            +T  L IHGD
Sbjct: 66  VHRVVSLLLEAEAAVEETPGAISTRSALRIVDAFLMSKFCYDPIKKIFYENTGRLAIHGD 125

Query: 127 ASAKAALYRDRFLLLSQRLSRDQHFSKPAFDIGMSHFGSCEISPIQSLVGQTGRKWVMGV 186
           ASAK+ALYR+RFLLL QRLSRDQHFSKPAFD  MSHFGSCEISPIQSL+GQTG++WVMGV
Sbjct: 126 ASAKSALYRNRFLLLFQRLSRDQHFSKPAFDTEMSHFGSCEISPIQSLIGQTGKRWVMGV 185

Query: 187 ISQMEDGHFYLEDLTASVEINLSSAISFT 204
           ISQ+EDGHF+LEDLTASVEINLS+AISFT
Sbjct: 186 ISQLEDGHFFLEDLTASVEINLSNAISFT 213

The following BLAST results are available for this feature:

BLAST of CsGy1G020700 vs. NCBI nr


Match Name	E-value	Identity	Description
KGN65523.1	1.7e-112	95.13	hypothetical protein Csa_1G434690 [Cucumis sativus]	[more]
XP_011657177.1	8.6e-104	93.09	PREDICTED: DNA polymerase epsilon subunit 2 [Cucumis sativus]	[more]
XP_016899382.1	3.8e-91	82.57	PREDICTED: LOW QUALITY PROTEIN: DNA polymerase epsilon subunit 2 [Cucumis melo]	[more]
XP_023525784.1	2.6e-84	77.98	DNA polymerase epsilon subunit B [Cucurbita pepo subsp. pepo]	[more]
XP_022998323.1	3.4e-84	77.98	DNA polymerase epsilon subunit B [Cucurbita maxima]	[more]

BLAST of CsGy1G020700 vs. TAIR10


Match Name	E-value	Identity	Description
AT5G22110.1	2.4e-52	54.93	DNA polymerase epsilon subunit B2	[more]

BLAST of CsGy1G020700 vs. Swiss-Prot


Match Name	E-value	Identity	Description
sp\|Q500V9\|DPB2_ARATH	4.4e-51	54.93	DNA polymerase epsilon subunit B OS=Arabidopsis thaliana OX=3702 GN=DPB2 PE=1 SV...	[more]
sp\|Q54Y85\|DPOE2_DICDI	1.9e-17	30.92	DNA polymerase epsilon subunit 2 OS=Dictyostelium discoideum OX=44689 GN=pole2 P...	[more]
sp\|A7YWS7\|DPOE2_BOVIN	3.7e-13	28.18	DNA polymerase epsilon subunit 2 OS=Bos taurus OX=9913 GN=POLE2 PE=2 SV=1	[more]
sp\|O54956\|DPOE2_MOUSE	5.3e-12	28.18	DNA polymerase epsilon subunit 2 OS=Mus musculus OX=10090 GN=Pole2 PE=2 SV=2	[more]
sp\|P56282\|DPOE2_HUMAN	2.0e-11	26.82	DNA polymerase epsilon subunit 2 OS=Homo sapiens OX=9606 GN=POLE2 PE=1 SV=2	[more]

BLAST of CsGy1G020700 vs. TrEMBL


Match Name	E-value	Identity	Description
tr\|A0A0A0LUV9\|A0A0A0LUV9_CUCSA	1.1e-112	95.13	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_1G434690 PE=4 SV=1	[more]
tr\|A0A1S4DTQ5\|A0A1S4DTQ5_CUCME	2.5e-91	82.57	DNA polymerase epsilon subunit OS=Cucumis melo OX=3656 GN=LOC103501415 PE=3 SV=1	[more]
tr\|A0A2I4GYY1\|A0A2I4GYY1_9ROSI	3.5e-69	62.22	DNA polymerase epsilon subunit OS=Juglans regia OX=51240 GN=LOC109012089 PE=3 SV...	[more]
tr\|A0A2I4GYY9\|A0A2I4GYY9_9ROSI	3.5e-69	62.22	DNA polymerase epsilon subunit OS=Juglans regia OX=51240 GN=LOC109012089 PE=3 SV...	[more]
tr\|A5AMH8\|A5AMH8_VITVI	3.9e-68	66.99	DNA polymerase epsilon subunit OS=Vitis vinifera OX=29760 GN=VITISV_038180 PE=3 ...	[more]

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0071897	DNA biosynthetic process
biological_process	GO:0006261	DNA-dependent DNA replication
biological_process	GO:0009793	embryo development ending in seed dormancy
biological_process	GO:0051781	positive regulation of cell division
cellular_component	GO:0008622	epsilon DNA polymerase complex
molecular_function	GO:0003677	DNA binding
molecular_function	GO:0003887	DNA-directed DNA polymerase activity
molecular_function	GO:0070182	DNA polymerase binding

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CsGy1G020700.1	CsGy1G020700.1	mRNA

InterPro

Analysis Name: InterPro Annotations of cucumber Gy14 genome (v2)
Date Performed: 2018-09-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	PANTHER	PTHR12708	DNA POLYMERASE EPSILON SUBUNIT B	coord: 4..207

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
CsGy1G020700	Csa1G434690	Cucumber (Chinese Long) v2	cgybcuB002
CsGy1G020700	CSPI01G20940	Wild cucumber (PI 183967)	cgybcpiB002
CsGy1G020700	CsaV3_1G032270	Cucumber (Chinese Long) v3	cgybcucB001

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:

None