CsaV3_1G032270 (gene) Cucumber (Chinese Long) v3 | Cucurbit Genomics Database (CuGenDB)

Overview


Name	CsaV3_1G032270
Type	gene
Organism	Cucumis sativus (Cucumber (Chinese Long) v3)
Description	DNA polymerase epsilon subunit
Location	chr1 : 19226991 .. 19238108 (+)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonpolypeptideCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

GTTTCAAGAAATAACTTATTTCTAAAAAAATAGGAAGAAAGTTGGAGAAAAAGTGAAGCAAAGTCTCAACCTAGAAGAATGAGCAGAAAGATAGGAGAATAGGTTGAGCCTCAGCGACTGAAACAGGTACGGCAACTTCCCCAACTGCTGAAACCCGGATACAGGAAGGAGAAGAACGGCTACGTGGACTGAGGCAGCTTCTAATGGCGCCGACTGATGGTTTGTGCGTCTTCTTATTGAAGTGTGAAATATGAGCTACTTGCTGACTCCCACTGGGTGGTAGGCTCTGGCCGGGTACCAAGAATTGAGTGAATATAGTGGGTTGGAAATCTTTGATCAAGTCAAGAGACCTTTCTCATTCCCGCAAGGACACAAGTACTTCTCCAACAAGAACTGAGAGCTACAGGAACAAGAACTAGCGGGACAAGAACTTAGTCAACACGAACAGCTACTGCAAGAGCGGCCTCTTGCCCTTGGACCACTCAAAATCAGGGAGCCACAAGGTTCGGATCCGTAGTAGTCTTTTCTTCTTCTTCCTATTCATTTGTTCTTTTTCTTCCTTTAACTGAAAACCTTTAACTGCGTTTTCTTGTTGGACTGATTACAATTGTATCTAGTAGAGCCAAAAAAGAATTTCGTCGTGAATCAACCCTCCATTTTCCAACCCCATCATCATTCCTTCACAATTATTGTGCAGAATTGCAGATTGTCTCACAGAAGAATGGACACATTAACTTTGAGGAAAAAGGTACAGAGGAAAGCTAAAATCAGAGGGTTGTACAGCATCAAACTGGAAGCTCTTGACGAGATTGTTTCCTTTGTCTCTCGTTCCCATGGCTTCGAAGATGAAGCTATAGAATTTGTTCTTGACAATCTCCATGAAGAATCTTGTACTGTTCCTTCTTCTTTCATACTACGATTATATCTTCTTTGCAATTCACCTCATTCCTTTTCATGGACAGTTTCTTTGTTTTGGCTATTGTGGCAGTGAAATCTCCAATATTAGACAAGGATGCGGTGCATCGAGTTATCAGCATTATGGTTGCAGCTGATAAAGTGGGAGAAGAAAGTCCCAATACCATTACCAGTACATCTGCTCTTTGCATCATCAACGCTTTTGATATCCCCAAGTTTCGTTATGATCCCATAAAAAAGATCTTTCTGTATGGTTTTCTCCCATTTATATTTATTTTTAATAGTTGTTAAACTAAGCATACCTGGTTAAGCATATACCTTGGGCCAAGAAGTCAGCAAAATCTCTCATTCCCATGTGTTGTTGAATACTTGAACTAAAAAAAAACTACTAGTTGGGTTTTTGGGATAATTAGACGCGGATAACTAATGCAGCTCATTGCAAAAAAGAGAGATATAATGGATTTAACTGAGAACTATCATCATCAACATTCCTTTTCTCTGCACTTGAAATCACATGTTCTTGAACCATGTACATATATATTTTTAGGCACACAGAAAACCTTCCAATTCATGGAGATGCTTCTGCTAAAGCTGCTTTATATAGAGATAGGTTTCTTTTGCTTTCCCAAAGGCTCTCTCGAGATCAGCATTTCTCCAAACCTGCTTTTGACATTGGCATGTCTCATTTTGGAAGTTGTGAGGTACTCCATTTCTCTTGACCTATGAATTGATCATGTTAGCCTTTACAATTGAACATGAGCATTTACACTAATTTTGTTTGTGATGTGTTTCCCAGATTTCTCCTATTCAATCTTTGGTGGGGCAAACAGGGAGAAAATGGGTCATGGGAGTGATCTCTCAAATGGAGGATGGCCACTTCTACTTGGAAGACCTTACCGCATCTGTGGAAATTAATTTATCTAGTGCTATATCCTTTACTGGCAACTTCTATGATGTGGAAAAATCTGAACTTGTTTGATATTTGAAGATGACATGCCCTGCAGTTTTCATTAATAGTTAGCACAAGATAACTACAGGTCTATTTACAGAGAACACCATTATTGTAGCTGAAGGAGAGATGCTCGTGGAGGGTATTTTTCAGGTTTGTAGTACCACGTTTGCCTTCAAGTTCTGTATAAATAGGTGGTTGAAATTTCCCCTTAGTGTCCTATTAGGTATTTCTAAACCCCCTTGTTTATAGAGAGAACTTACTTTCTTAAAGACATATGTAGCGTTCATTATTCTATTTTCTCTACGGATCATCCAGTTTTCCTATTAGCTGTTGCCAGGATGTACTTTGCTTACGAAGTTTTCATATTTGATCAGATTATTATGCTTGGTTACCCTTTTAAAAGGTATTATCTTTGCATATTTCCCTATATTCTTTTCAAAAAAGCTTTGCAGTTTTGGCACTTTTAATGTATAGCAGTATTTTGTTTATACTGTAACTGCTTCCTAAGTTGAACGCTTTTTGAAGTTCTTACATGCTTATGAGATGATTTTTTTTTTACAATGCTATGGGATGGATCTTAGTTCTGTTTGGTCCTGATCAGAGTTTTGTGTAAAGATACTACAGAAATATCTTGATATATTGCTATTCCTCAACGATTACAATATGAAAATACTATATGAAACAGTAAAATGATCGCGAATGATCAATCATCAAAATTACAGCCACTAATTACTGAAGTAAATCAACAGACAGAAATTCCACAAACATTCTTTCCAAACAATAACAATGGAAAATAAGAAAAAACACAAGAACCCGAACCCTCTGCTTTCCTTTCCTGCGCAAGGAGGAATGCAGCCTCTCTTCTTCTCCAGAAAATACTCGATACCTCCTTCCTTTTCTTTACTTTCTTTTATTATGATTTGCTAACTAACTACTGTGCCCCACCAGAGTGGTCCCCATCTTCATTACCACCTCCTACACTCCCACGTGTGGCCTTACTGTTATTCTTATTTCTTCTACTATATTTAAACAATATTGGAGGCCTAGCATTTTGCATGCCTAAGTTATATTTCACGTAGTTCTCAATTGGTAAGTGGATAACACCATCTTGTAGTTGGTTATTTAATATTTCGTTAGGTATCCAGAAGTTGAAATTTACTTTTGAGAGATATGAAACCTTATTTTTGTAAACAATTTTTTTTTTTTTAGCGAGTTCCGCCCACAGTCTTCTCAAAAGGTTTTGAATCTTGATAACATGAGGTTGACATTTAAGCACAACAGATTTAAATATGCAAGTGTCCTGCCTTCATCCAAAGCATATTTACTATTCAAAATTGGATTTGCTTGTGGAATTTCATTCTTGTCCTTTACTTTCTTATTGTTTTCTAGCACAAGGATACTGATGGGATACCAGTTGTTCCCAATCCCAGTAGCTGAAAATCAAATACTACTGATATTACTAAGATGAAAATAACGATAATAACTACAGGACAATATCACCGAATTCGTTTATAGCCGATTCGATGGACACTCTTCCCTCTCCTGCTATCCTTTCTTTCAAGAATATACAGAAAGATAACTTCACCAAAAGAAAAGCTCCCAGTTCTCTCTTTCACTTCCTTATTTATATTCACTCCCCACCTACAGTGGTCCCCCTGTTTCATGTGTCGCTCCACTCATTGTGGTCCCCACATGCGGTTACATAACTAACTCCTCCTCCTGCTTCTCTTTCCTATTCTTTCTCCTACTGTATTGATGTATGATGGGTGGTCTAACATTGCATTCCCGGTCCAGTTTCACCTTGTCCTCAAGGTGGAAATCGGGGAAGGATTGCTGAAAGTCATCATAGTTTTCCCATGTTGCTTCATGATGCGGTAGACCCTTCCAACTCATTAAGACTTCCCATCCTCCTTTCTCGTTTTTCTGATAACCGAAGACCTCCTGAGGCACAGCTCTCCTTTTCCGCAGTGATACCTGCCTGTATGGCCTAATCTTTAGGAACACCTTATCGCCTTCTTCAAATTCGACATGTCTTCTCTTCATATCGGCACAACTCTTCATCTTTTCTTGGGCTATGCGTAAATGTTCCTTCAAAGCACCCAAGGCTACATCTCTTTCCTTAAGTTGCTCATCTAAAGCCGAGTTGGGAGTTTCACGATCTCCATAATATATCAGGGCTGGGGGTGTTCTTCCATAGACAGCTTGGAATGGTGACACGCCTAATGATCTTTGGAATGTAGTGTTATACCAGTATTCAGCCCAAGACAACCATTTCATCCAATCTTTCGGTTTTTGCCCACGGAAGCACCTTAAATAAATTTCTACAGATCTGTTGACCACCTCTGTCTATCCATCTGTCTAGGGGTGGTATGCTGTGCTTCGGTTCAACTTCGTACCAGCTAAACGAAACAACTCTTTCAAAAAATGACTCAGAAAGATCTTGTCTCGGTCAGGGACAATTGACTGTGGAAAGCCATGCAGTCTTACAACCTCCCGAACAATTCAGCTACCATCTTAGCGTCAAAAGGATGTTTAAGGCCGAGGAAGTGAGCATATTTATTGAAGCAATCCACCACTACGAATATTACTTCAAACCCCATTGATTTAGGCAGTCCTTCAATAAAATCCATGGATATATCCTCCCATACTCTATTTGGTATCTCTAGGGGGGTCAATAATCCTGCAGGTGACAATGCTAAAGTCTTATTCCGCTGACACGTAATACATTCTTCGCAATATTTTTTAACGTGAGCTTTCATTCCCACCCAAAACAACTCTCCTGTCAGCCTCTTATACGTTCTTAAGAACCCGGAATGACCTCCTAGGGCCGAGTCATGATATGTGTGCATAATAATAGGTATCAATGAAGAATTCTTCGCAATCACTAATCTCCCTTTGTATCTCAGTATTCCTTGTTGCAGAGTGTAATTCTTTACCTTCTCCTCCCTCTGAATCCTGTTGATTATATCTTGCAAGTAGTCATTCTTGTTAACCTCCTCTCTGATTACCTTTATGTCCACCAAGGTGGGGGCTGTTAGTTGGTTAAGATGGACAGTTGGTGGCACTCGTGAAAGGGCATCTGCTGCCTTGTTTTCCAAGCCCGGTTTATACACCACCTCAAATGAATAACCCAACAATTTTGCAATCCACTTCTGATATTGCGGTTGTATGACTCTCTGTTCCAGAAAGAACTTAAGTGATCGCTGATCTGTCTCAACTATGAATGTCCTTCCTAACAAATAGGGTCGCCAACGTTGGACTATCAATACTACTGCCATTAATTCCCTCTCGTATACTGGTTTGGTTCGGTCTCGCAAGGCTAGTGTATGGCTATAAAAAGCAATTGGTCTCTTGTTCTGCATTAGCACTGCCCCTACCCCATAGCCTGACGCATCTGTATCTACTTCGAATGGTGCATTAAAATCTGGAAGAGCTAATATAGGCAAGGCCATCATTGCTCGTTGAAGCTTTTCAAACGCTTCTTGTGCTCCCTCATTCCATTTAAATGATCCCAGCTTCAGTAGTTGAGTTAGAGGTGCCGCTATGGACCCATAGTGCTGTACAAAACGGCGGTAGTAACCAGTCAACCCCAGAAACCCTCTAACTTCCCGAACATTTGTTGGAGTTGGCCGTTGCTTGATTGCTCTAATTTTTTCAGGATTGACTTCTACTCCCTTTCCTGACAATGTGTCCCAAATGCTCCACATTTTAGTACGCAAAGCTGCATTTCTTTCTATTAGCAAACAGTTTATGCCTCCTCAATTCTTCCAGAACTAATTCAATGTGCTGACAATGTTCCTCTAAGTTCCTACTATAGACCAGTATATCATCGAGGAAGACCAAGACGAACTTCCTCAAGTACGATCTAAAAACCGAATTCATTAGTGATTGGAAAGTTTCTGGTGCGTTTGTGAGTCCAAACGGCATCACCAAAAACTCATAATGTCCTTCGTGAGTTCTAAAGGCCGTTTTCTCTATATCTTGACTGCACATTCTAATTGATGATATCCCGCTTTCAAGTCAATTTTGGAGAATAGATTTGCACCATTTAGCTCGTCGAACAGTTCTTCCACAACAGGGATAGGAAACTTATCTGGAATAGTTATGTTATTGAGTGCCCTGTAGTCCACGCAGAATCGCCAACTTCCGTCCTTCTTGACCAATAATACGGGGCTTGAGTAGGGGCTTGTGCTGGGACGGATAATTCCTGAGGTTAGCATTTCGTCCACCAATTTTTCCATTTCCTCCTTCTGCTGAAAAGCATACCGATAAGGCCTGACATTCACCGGATCTGCCCCTCCCCTTACGTGTATATGATGTTCGATATCCCTTCTTGGAGGTAATTCTTTGGGCCAATCGAAAACGTCATTATACTGTTTCAAGGCTGTTAGTATGCTCTCAGGTATGTTATTACTCTCTTCTGGCTCTATCTCGGCTATGTGGGCTTCCAAGGTTCTGCACTCAATCAAGTATCCCATGTCTGACTCAGTCCACGATTTAGTTAAATTCTTCAAGCTCACTTGAGTTTTGGTTAGGCTTGGATCCCCTTTTATCACTATTTTTCTGTTGTCATGGAAAAATGACATGGTTAAGTTCTTTCAGTCCATCTCAGTCACTCCCAATGAGTGTAACCATTGCATCCCAAGTATCACGTCTACCCCTCCCAGTTCCAGTGGTAGGAAGTTTTCAAGGACTGTCCACCCATTGAGATCCAACTTTACTTTTTCACACACTCCCTTGCCTTTGATGGCTGTTCCTAACCCAAGTATTACCCCATAGTTAGAAGTATCCTTTGTGGGTAATTTCAGTGTCATCACTAGTCGGTCGGATATGAAATTGTGGGTGGCTCCGCAATCCACTAGCACGACAACCTCCTTACTTTGAATTGTTCCCCTTATCTTCATGGTACTCGGATTCGTCAATCCCACTACCGAGTTAATATATAACTCCACTACTTCCCCAAGGTCATTCTGCAACTCAATAGTTTTCAATTCCTTCAAGTCATACTCGTCTTCCTCAATAATTTCTTCCTCCACGTCGTCCGCTCTTACCACGAACATACATAACTCACGTATTTCCTTCACCCTGCATTTGTGCCTGGAGTAATACTTCTCATCACATTTGAAACAGAGTCCTTTCTCCCTCTTGGCCTGGAATTCTGCGTCGAAAAGCCGTTTGGATGGTCCTTCTTTCTTAATCTCCTTTGCCGGTGATCCCCTCAGTATGATTGTTCGTATCGAAAATACCGTGTTCTCCTTATTCCCCTGTTCTTTTATAATTGAATTTGTTTTGGCCGTATTATAGGGGTAATTTGGAACTTTCGCTCCAGAATAACCGGGTAAATTTGCTTATCTCCTCAGGATCTTCCAATGTTCCACCATTTGCGCGTATCTCATCATCTCCGCTAATCCCACGGGATTGCAGAATTCCATCTCCACCTTAATCCACGGTAACAGCCCTCCCATGAACGTCTCTTCCACAATCTTTTTCGGAATGTCCGATCGGTGCCACCCACTTATCGAATAGATTCCGGTATTCCTCTACACTTGATTCCTGCTGCTGAATACGTAAGAACCGACCATATAGGGAGCCTTCACGGGATGATCGAAACGGATCAATAATCGTTCTTTTAAGTTTAACCAACAGGTAAATTTGTCTCTCTCCTCCTGCGATCGATACCAGTTGAGTGTGGGGCCTTCAAAACTGATTGTAGCGACCGTGAGTTTTCAGAATTCGTCAGTTTGTGTATTTGAAAATACCTATCTGCACGGAATAGCCATGAATCTGGGTCATCTCCATTGAATACCGACATTTCAACTTTGTTGAATTTGTTTCGATCGTTGTTATCCCCATCGCCATCACCCTTCTTCTCCATCGTGTCATTTTTAGTTTCCTTACTTGCCGAACTCTCTCCCTCCGCCGATTTTCCCGTCCATGTTTCTTGTGCCGACGAATCGATTCGTTTACCGCTCGCTAATACTCGTTCCTTGGCCATCGTCTCCATGAATATCATCACCATCTGGTGTGTTTTCTCCACTTGGGCCTGAAGGTTTTCCATGTTTTGTGACATCACCGTAAGCTTCTCTTCCATCACCGGAATTTTGTTGAGTTCTTGTTCGTGTGTGTCCCTTCTCTCTTCACTTCTGGTTTGAACCATGTTTTCCCACTTATTTCGAATCGACGTGCTCTGATACCAAGTTGATGGGATACCAGTTGTTCTCAATCCCAGTAGCCGAAAATCAAATACTACTGATATTACTAAGATGAAAATAATGATAATAACTACAGGACAATATCACCGAATTGGTTTATAGCCGATTCGATGGACACTCTTCCCTCTCCTGCTATCCTTTCTTTCAAGAATATACAGAAAGATAACTTCACCAAAAGAAAAGCTCCCTGTTCTCTCTTTCACTCCCTTATTTATATTCACTCCCCACCTACAGTGGTCCCCCTGTTTCATGTGTCGCTCCACTCATTGTGGTCCCCACATGCGGTTACATAACTAACTCCTCCTCCTGCTTCTCTTTCCTATTCTTTCTCCTACTGTATTGATGTATGATGGGTGGTCTAACAGATACCTTCCTACTCAAACGTTTTGGAAAATGTTCAGAACTTGTTTCATTGAAGTGTTTCAAATACTCTTCATCGTATTAATTATGTGTTTTTCCTGGGTGTCTATTTAGGTTGTTACGTGTGGATTTCCTCCATTAGAGGAAAGGGGCAAGTCTCTTAAATTGCTAGCAGGCCAGGACTTCTTTGGCGATGGTGTGCTACCTAAAGAGGAGACTGTATCCTCTTGTTTTGGTCTATAAAATGAATTTCTAAATAAGCATTGGAAAGGAGGGCTATAGTTGACATTTTATTGTGCTGAATTTTGGTTATTAAAGGGGTGTAAGTGCAATCAAGTTTTCCTTAATCATCAATAGCTCAGGCGTGCAGATCTGGAGAAGAAAGCAGTTAATGATATGTTTGTCATACTCTCTGACATTTGGTTGGATAGTGAAGAGGTGACAAATAGCCTTTTTATGTTTCATGTGTATTGTGTGTCTATAAAGCTTGGTGGCCTTATTAAAACTTTTTCATGTGGTAGGCCATGGGAAAACTGGAGACCATACTTGATGGTTTCGAGAATGTGGAAGTGGTTCCTTCCTTGTTTGTTTTGATGGGGAATTTTTGTTCCCATCCTTGTAATATTGCCTTTAATTCTTTCTCAAGTCTCAGGTATGTATTATCGCAATTGTTTCTGTGTTATTGAGATGAGTTCAGTGCAATAATGAGTTCAAATGTGCAGACTACAGTTTGGTAAGTTAGGAAAAATGATAGCAGCTCATCCACGATTAAATGAGCATAGCAAGTTTCTTTTTATTCCTGGTCCAGATGATGCAGGTTTGTGTTGTTATCTGTTAAGAAACTCCTCACTATGCACTATATTTTCTGAGATTTTATTTACATGGAGTTTATAGGGCCATCAACAGTTCTACCTAGGTGTGCTTTGCCGAAGTATTTAACCGAAGAGCTTCAAATGCATGTTTCAAATGCCATTTTCTCAAGTAACCCTTGCAGGTGAATACTTTGATTGCTGACTTGTAACCTTAATGGTGCTTCTAGTCTTGACTATAATATTATGTTGCATGAGGGGCTTCACTTCTACAGCTTACTTGTGAAATAAATCATTTTTTTTATTTGGAATAATTTAATAGATTTAAAGGCCAGTGTTATTGGTATGGATTTAGTTATCCAGTTTTTTTAACTATTGAATTTAGGGGGGAAAAGGTCATTTATTAACAAGTGAGAACAAAGCTACGATGAGCAAAATAAATGGTCCTCTACAAGGCGTTCTATTTTTTACTTAATTAAGAGGAATTAACCGATTTTAAGATGAGATTATGCTCCCTTTGGTGAATGCGATGCCTTTTACAGTCCTTTGGTGAATGCTATGCCTTTTACAGTCCTTTGGTGAATGCTATGCCTTTTACAGTCCTTTGGTGAATGCTATGCCTTTTACAGTCCTTTGGTGAATGCTATGCCTTTTACAGTTTTACTCCATAGTGGTGGATAATTGTCATACTTGAATGCAGGGTCAGATTCTACACTCAGGAAATTGTATTTTTCCGACAGGACTTGCTTTATAGAATGCGTCGTTCCTGTCTCATACCACCTTCCACAGAAGAAACAAGCGATCCTTTTGAGCATGTGAATTTTTTTTCTTTGCCTTTTACATTTCTGTTTTTTTTTTCTAGTTCTCTGTTTATGGATTCTACACCCTTTCGGATATTTATATATGAAGGCCTTAAGTTTTCATGATTCTCTTGCAGCTTGTTGCCACCATAACTCATCAAAGTCATCTCTGTCCTCTTCCTCTGGTTATTCAACCAATTATCTGGAATTACGACCACTGTCTTCATCTATATCCTACTCCTCATGTGGTACTTACCCATATCTCAATCTAGTGTTTTAATCGATCTATTTATACATCCAAAGTTGGATGTTCTTTCTCTCCACACCTGGAGACAGATAATGAATGAGGGTTCCGATGAATGATAAGTGTTCTACTGCGATTGAACTTTCAGATTATTATATCAATCTTTATTTGGTTTATGCAGATAGTGTTGGGGGATAGAAGTAAGCAACAAGCGTTCAAATACACAGGAATCACTTGCTTTAATCCTGGTTCCTTCACAAATGATAGCACTTTTGTGGCATATCGTCCATGCAATCAAGAAGTTGAACTGTCTGCCCTGTAAATTATTACAAAGTTTAGGCCAGATTCAAGCGGGCACACTCCTTTATGCAGCATAACAATTCGTTTAGAACATGAATGAGAAATCCTATAGCATCATTCTTTATCTTGGGAGTTGCACTATTCTTTATCTTGGGAGTTGCACTGGTGCACACCAAGAATTACCACTAGCTAGAATCTAACTCTATGCCGAAGAAGGCTTTTGTGATTTCTGTTTAGGAAAAAGTCGAAACATTGATGCAGAGTTAGGAATCTTTTTAGTTGTACAATTGTAAATCCGAATAACATATATTTTCTTTTAGATTATGTACTTTCTAACCGTGGACGATGGATTGATCAACAACTAACCTAAAAGTTCTTCACCCACCTGATGGATTTTTTTTTTTTTAGAGAAAAAGATAATTAGTTCATGCCTTATAGTGCATGTTATGTTATAATGTTATTCAAGATCAGATCATGAATACAGGTTAAGCATAATGAGGGATTTTTTATTTTTATTTTTTGGTAA

mRNA sequence

ATGGACACATTAACTTTGAGGAAAAAGGTACAGAGGAAAGCTAAAATCAGAGGGTTGTACAGCATCAAACTGGAAGCTCTTGACGAGATTGTTTCCTTTGTCTCTCGTTCCCATGGCTTCGAAGATGAAGCTATAGAATTTGTTCTTGACAATCTCCATGAAGAATCTTTGAAATCTCCAATATTAGACAAGGATGCGGTGCATCGAGTTATCAGCATTATGGTTGCAGCTGATAAAGTGGGAGAAGAAAGTCCCAATACCATTACCAGTACATCTGCTCTTTGCATCATCAACGCTTTTGATATCCCCAAGTTTCGTTATGATCCCATAAAAAAGATCTTTCTGCACACAGAAAACCTTCCAATTCATGGAGATGCTTCTGCTAAAGCTGCTTTATATAGAGATAGGTTTCTTTTGCTTTCCCAAAGGCTCTCTCGAGATCAGCATTTCTCCAAACCTGCTTTTGACATTGGCATGTCTCATTTTGGAAGTTGTGAGATTTCTCCTATTCAATCTTTGGTGGGGCAAACAGGGAGAAAATGGGTCATGGGAGTGATCTCTCAAATGGAGGATGGCCACTTCTACTTGGAAGACCTTACCGCATCTGTGGAAATTAATTTATCTAGTGCTAAGATAACTACAGGTCTATTTACAGAGAACACCATTATTGTAGCTGAAGGAGAGATGCTCGTGGAGGGTATTTTTCAGGTTGTTACGTGTGGATTTCCTCCATTAGAGGAAAGGGGCAAGTCTCTTAAATTGCTAGCAGGCCAGGACTTCTTTGGCGATGGTGTGCTACCTAAAGAGGAGACTCTCAGGCGTGCAGATCTGGAGAAGAAAGCAGTTAATGATATGTTTGTCATACTCTCTGACATTTGGTTGGATAGTGAAGAGGCCATGGGAAAACTGGAGACCATACTTGATGGTTTCGAGAATGTGGAAGTGGTTCCTTCCTTGTTTGTTTTGATGGGGAATTTTTGTTCCCATCCTTGTAATATTGCCTTTAATTCTTTCTCAAGTCTCAGACTACAGTTTGGTAAGTTAGGAAAAATGATAGCAGCTCATCCACGATTAAATGAGCATAGCAAGTTTCTTTTTATTCCTGGTCCAGATGATGCAGGGCCATCAACAGTTCTACCTAGGTGTGCTTTGCCGAAGTATTTAACCGAAGAGCTTCAAATGCATGTTTCAAATGCCATTTTCTCAAGTAACCCTTGCAGGGTCAGATTCTACACTCAGGAAATTGTATTTTTCCGACAGGACTTGCTTTATAGAATGCGTCGTTCCTGTCTCATACCACCTTCCACAGAAGAAACAAGCGATCCTTTTGAGCATCTTGTTGCCACCATAACTCATCAAAGTCATCTCTGTCCTCTTCCTCTGGTTATTCAACCAATTATCTGGAATTACGACCACTGTCTTCATCTATATCCTACTCCTCATGTGATAGTGTTGGGGGATAGAAGTAAGCAACAAGCGTTCAAATACACAGGAATCACTTGCTTTAATCCTGGTTCCTTCACAAATGATAGCACTTTTGTGGCATATCGTCCATGCAATCAAGAAGTTGAACTGTCTGCCCTGTAA

Coding sequence (CDS)

ATGGACACATTAACTTTGAGGAAAAAGGTACAGAGGAAAGCTAAAATCAGAGGGTTGTACAGCATCAAACTGGAAGCTCTTGACGAGATTGTTTCCTTTGTCTCTCGTTCCCATGGCTTCGAAGATGAAGCTATAGAATTTGTTCTTGACAATCTCCATGAAGAATCTTTGAAATCTCCAATATTAGACAAGGATGCGGTGCATCGAGTTATCAGCATTATGGTTGCAGCTGATAAAGTGGGAGAAGAAAGTCCCAATACCATTACCAGTACATCTGCTCTTTGCATCATCAACGCTTTTGATATCCCCAAGTTTCGTTATGATCCCATAAAAAAGATCTTTCTGCACACAGAAAACCTTCCAATTCATGGAGATGCTTCTGCTAAAGCTGCTTTATATAGAGATAGGTTTCTTTTGCTTTCCCAAAGGCTCTCTCGAGATCAGCATTTCTCCAAACCTGCTTTTGACATTGGCATGTCTCATTTTGGAAGTTGTGAGATTTCTCCTATTCAATCTTTGGTGGGGCAAACAGGGAGAAAATGGGTCATGGGAGTGATCTCTCAAATGGAGGATGGCCACTTCTACTTGGAAGACCTTACCGCATCTGTGGAAATTAATTTATCTAGTGCTAAGATAACTACAGGTCTATTTACAGAGAACACCATTATTGTAGCTGAAGGAGAGATGCTCGTGGAGGGTATTTTTCAGGTTGTTACGTGTGGATTTCCTCCATTAGAGGAAAGGGGCAAGTCTCTTAAATTGCTAGCAGGCCAGGACTTCTTTGGCGATGGTGTGCTACCTAAAGAGGAGACTCTCAGGCGTGCAGATCTGGAGAAGAAAGCAGTTAATGATATGTTTGTCATACTCTCTGACATTTGGTTGGATAGTGAAGAGGCCATGGGAAAACTGGAGACCATACTTGATGGTTTCGAGAATGTGGAAGTGGTTCCTTCCTTGTTTGTTTTGATGGGGAATTTTTGTTCCCATCCTTGTAATATTGCCTTTAATTCTTTCTCAAGTCTCAGACTACAGTTTGGTAAGTTAGGAAAAATGATAGCAGCTCATCCACGATTAAATGAGCATAGCAAGTTTCTTTTTATTCCTGGTCCAGATGATGCAGGGCCATCAACAGTTCTACCTAGGTGTGCTTTGCCGAAGTATTTAACCGAAGAGCTTCAAATGCATGTTTCAAATGCCATTTTCTCAAGTAACCCTTGCAGGGTCAGATTCTACACTCAGGAAATTGTATTTTTCCGACAGGACTTGCTTTATAGAATGCGTCGTTCCTGTCTCATACCACCTTCCACAGAAGAAACAAGCGATCCTTTTGAGCATCTTGTTGCCACCATAACTCATCAAAGTCATCTCTGTCCTCTTCCTCTGGTTATTCAACCAATTATCTGGAATTACGACCACTGTCTTCATCTATATCCTACTCCTCATGTGATAGTGTTGGGGGATAGAAGTAAGCAACAAGCGTTCAAATACACAGGAATCACTTGCTTTAATCCTGGTTCCTTCACAAATGATAGCACTTTTGTGGCATATCGTCCATGCAATCAAGAAGTTGAACTGTCTGCCCTGTAA

Protein sequence

MDTLTLRKKVQRKAKIRGLYSIKLEALDEIVSFVSRSHGFEDEAIEFVLDNLHEESLKSPILDKDAVHRVISIMVAADKVGEESPNTITSTSALCIINAFDIPKFRYDPIKKIFLHTENLPIHGDASAKAALYRDRFLLLSQRLSRDQHFSKPAFDIGMSHFGSCEISPIQSLVGQTGRKWVMGVISQMEDGHFYLEDLTASVEINLSSAKITTGLFTENTIIVAEGEMLVEGIFQVVTCGFPPLEERGKSLKLLAGQDFFGDGVLPKEETLRRADLEKKAVNDMFVILSDIWLDSEEAMGKLETILDGFENVEVVPSLFVLMGNFCSHPCNIAFNSFSSLRLQFGKLGKMIAAHPRLNEHSKFLFIPGPDDAGPSTVLPRCALPKYLTEELQMHVSNAIFSSNPCRVRFYTQEIVFFRQDLLYRMRRSCLIPPSTEETSDPFEHLVATITHQSHLCPLPLVIQPIIWNYDHCLHLYPTPHVIVLGDRSKQQAFKYTGITCFNPGSFTNDSTFVAYRPCNQEVELSAL

Homology

[Close]

BLAST of CsaV3_1G032270 vs. NCBI nr
Match: XP_011657177.1 (PREDICTED: DNA polymerase epsilon subunit 2 [Cucumis sativus])

HSP 1 Score: 1072.4 bits (2772), Expect = 4.8e-310
Identity = 528/528 (100.00%), Postives = 528/528 (100.00%), Query Frame = 0


Query: 1   MDTLTLRKKVQRKAKIRGLYSIKLEALDEIVSFVSRSHGFEDEAIEFVLDNLHEESLKSP 60
           MDTLTLRKKVQRKAKIRGLYSIKLEALDEIVSFVSRSHGFEDEAIEFVLDNLHEESLKSP
Sbjct: 1   MDTLTLRKKVQRKAKIRGLYSIKLEALDEIVSFVSRSHGFEDEAIEFVLDNLHEESLKSP 60

Query: 61  ILDKDAVHRVISIMVAADKVGEESPNTITSTSALCIINAFDIPKFRYDPIKKIFLHTENL 120
           ILDKDAVHRVISIMVAADKVGEESPNTITSTSALCIINAFDIPKFRYDPIKKIFLHTENL
Sbjct: 61  ILDKDAVHRVISIMVAADKVGEESPNTITSTSALCIINAFDIPKFRYDPIKKIFLHTENL 120

Query: 121 PIHGDASAKAALYRDRFLLLSQRLSRDQHFSKPAFDIGMSHFGSCEISPIQSLVGQTGRK 180
           PIHGDASAKAALYRDRFLLLSQRLSRDQHFSKPAFDIGMSHFGSCEISPIQSLVGQTGRK
Sbjct: 121 PIHGDASAKAALYRDRFLLLSQRLSRDQHFSKPAFDIGMSHFGSCEISPIQSLVGQTGRK 180

Query: 181 WVMGVISQMEDGHFYLEDLTASVEINLSSAKITTGLFTENTIIVAEGEMLVEGIFQVVTC 240
           WVMGVISQMEDGHFYLEDLTASVEINLSSAKITTGLFTENTIIVAEGEMLVEGIFQVVTC
Sbjct: 181 WVMGVISQMEDGHFYLEDLTASVEINLSSAKITTGLFTENTIIVAEGEMLVEGIFQVVTC 240

Query: 241 GFPPLEERGKSLKLLAGQDFFGDGVLPKEETLRRADLEKKAVNDMFVILSDIWLDSEEAM 300
           GFPPLEERGKSLKLLAGQDFFGDGVLPKEETLRRADLEKKAVNDMFVILSDIWLDSEEAM
Sbjct: 241 GFPPLEERGKSLKLLAGQDFFGDGVLPKEETLRRADLEKKAVNDMFVILSDIWLDSEEAM 300

Query: 301 GKLETILDGFENVEVVPSLFVLMGNFCSHPCNIAFNSFSSLRLQFGKLGKMIAAHPRLNE 360
           GKLETILDGFENVEVVPSLFVLMGNFCSHPCNIAFNSFSSLRLQFGKLGKMIAAHPRLNE
Sbjct: 301 GKLETILDGFENVEVVPSLFVLMGNFCSHPCNIAFNSFSSLRLQFGKLGKMIAAHPRLNE 360

Query: 361 HSKFLFIPGPDDAGPSTVLPRCALPKYLTEELQMHVSNAIFSSNPCRVRFYTQEIVFFRQ 420
           HSKFLFIPGPDDAGPSTVLPRCALPKYLTEELQMHVSNAIFSSNPCRVRFYTQEIVFFRQ
Sbjct: 361 HSKFLFIPGPDDAGPSTVLPRCALPKYLTEELQMHVSNAIFSSNPCRVRFYTQEIVFFRQ 420

Query: 421 DLLYRMRRSCLIPPSTEETSDPFEHLVATITHQSHLCPLPLVIQPIIWNYDHCLHLYPTP 480
           DLLYRMRRSCLIPPSTEETSDPFEHLVATITHQSHLCPLPLVIQPIIWNYDHCLHLYPTP
Sbjct: 421 DLLYRMRRSCLIPPSTEETSDPFEHLVATITHQSHLCPLPLVIQPIIWNYDHCLHLYPTP 480

Query: 481 HVIVLGDRSKQQAFKYTGITCFNPGSFTNDSTFVAYRPCNQEVELSAL 529
           HVIVLGDRSKQQAFKYTGITCFNPGSFTNDSTFVAYRPCNQEVELSAL
Sbjct: 481 HVIVLGDRSKQQAFKYTGITCFNPGSFTNDSTFVAYRPCNQEVELSAL 528

[Close]

BLAST of CsaV3_1G032270 vs. NCBI nr
Match: XP_016899382.1 (PREDICTED: LOW QUALITY PROTEIN: DNA polymerase epsilon subunit 2 [Cucumis melo])

HSP 1 Score: 1006.9 bits (2602), Expect = 2.5e-290
Identity = 497/529 (93.95%), Postives = 510/529 (96.41%), Query Frame = 0


Query: 1   MDTLTLRKKVQRKAKIRGLYSIKLEALDEIVSFVSRSHGFEDEAIEFVLDNLHEESLKSP 60
           MD LTLRKKVQRKAKIRGLYSIKLEALDEIVSFVSR HGFED+AIE VLD+LHEESLKSP
Sbjct: 1   MDALTLRKKVQRKAKIRGLYSIKLEALDEIVSFVSRFHGFEDDAIELVLDDLHEESLKSP 60

Query: 61  ILDKDAVHRVISIMVAADKVGEESPNTITSTSALCIINAFDIPKFRYDPIKKIF-LHTEN 120
           IL+KD VHRVIS ++AA++  E SPNTITST+ALCII+AFDI KFRYDPIKKIF  HT +
Sbjct: 61  ILEKDGVHRVISKLLAAEEAEEASPNTITSTTALCIIDAFDISKFRYDPIKKIFHRHTGD 120

Query: 121 LPIHGDASAKAALYRDRFLLLSQRLSRDQHFSKPAFDIGMSHFGSCEISPIQSLVGQTGR 180
           LPIHGDA AKAALYRDRFLLLSQRLSRDQHFSKPAFDIGMSHFGSCEISPIQSLVGQTGR
Sbjct: 121 LPIHGDAPAKAALYRDRFLLLSQRLSRDQHFSKPAFDIGMSHFGSCEISPIQSLVGQTGR 180

Query: 181 KWVMGVISQMEDGHFYLEDLTASVEINLSSAKITTGLFTENTIIVAEGEMLVEGIFQVVT 240
           KWVMGVISQMEDGHFYLEDLTASVEINLS+AKITTGLFTENTIIVAEGEMLVEGIFQVVT
Sbjct: 181 KWVMGVISQMEDGHFYLEDLTASVEINLSNAKITTGLFTENTIIVAEGEMLVEGIFQVVT 240

Query: 241 CGFPPLEERGKSLKLLAGQDFFGDGVLPKEETLRRADLEKKAVNDMFVILSDIWLDSEEA 300
           CGFPPLEER KSLKLLAGQDFFG GVLPKEETLR ADLEKKAVNDMFVILSDIWLDSEEA
Sbjct: 241 CGFPPLEERDKSLKLLAGQDFFGGGVLPKEETLRLADLEKKAVNDMFVILSDIWLDSEEA 300

Query: 301 MGKLETILDGFENVEVVPSLFVLMGNFCSHPCNIAFNSFSSLRLQFGKLGKMIAAHPRLN 360
           MGKLETILDGFENVEVVPSLFVLMGNFCSHPCNIAFNSFSSLRLQFGKLGKMIAAHPRLN
Sbjct: 301 MGKLETILDGFENVEVVPSLFVLMGNFCSHPCNIAFNSFSSLRLQFGKLGKMIAAHPRLN 360

Query: 361 EHSKFLFIPGPDDAGPSTVLPRCALPKYLTEELQMHVSNAIFSSNPCRVRFYTQEIVFFR 420
           +HSKF FIPGPDDAGPSTVLPRCALPKYLTEELQ+HV NA FSSNPCRVRFYTQEIVFFR
Sbjct: 361 KHSKFXFIPGPDDAGPSTVLPRCALPKYLTEELQVHVPNATFSSNPCRVRFYTQEIVFFR 420

Query: 421 QDLLYRMRRSCLIPPSTEETSDPFEHLVATITHQSHLCPLPLVIQPIIWNYDHCLHLYPT 480
           QDLLYRMRRSCLIPPSTEETSDPFEHLVATITHQSHLCPLPLVIQPIIWNYDHCLHLYPT
Sbjct: 421 QDLLYRMRRSCLIPPSTEETSDPFEHLVATITHQSHLCPLPLVIQPIIWNYDHCLHLYPT 480

Query: 481 PHVIVLGDRSKQQAFKYTGITCFNPGSFTNDSTFVAYRPCNQEVELSAL 529
           PHVIVLGDRSKQQAFKYTGITCFNPGSFTNDSTFVAYRPCNQEVELSAL
Sbjct: 481 PHVIVLGDRSKQQAFKYTGITCFNPGSFTNDSTFVAYRPCNQEVELSAL 529

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BLAST of CsaV3_1G032270 vs. NCBI nr
Match: XP_023525784.1 (DNA polymerase epsilon subunit B [Cucurbita pepo subsp. pepo])

HSP 1 Score: 971.8 bits (2511), Expect = 9.0e-280
Identity = 478/529 (90.36%), Postives = 503/529 (95.09%), Query Frame = 0


Query: 1   MDTLTLRKKVQRKAKIRGLYSIKLEALDEIVSFVSRSHGFEDEAIEFVLDNLHEESLKSP 60
           MD  TLR+KVQRK+KIRG YSIKL+AL EIVSF SR  G ED+AI+ VLD+LH+ESL+S 
Sbjct: 1   MDESTLRRKVQRKSKIRG-YSIKLDALAEIVSFASRFDGCEDDAIDLVLDHLHDESLQSS 60

Query: 61  ILDKDAVHRVISIMVAADKVGEESPNTITSTSALCIINAFDIPKFRYDPIKKIF-LHTEN 120
           I+DKDAVHRV+SI++AAD+ GEE P+T TSTSALCII+AFDI KFRYDPIKKIF +HT +
Sbjct: 61  IIDKDAVHRVVSILLAADEAGEECPDTSTSTSALCIIDAFDISKFRYDPIKKIFYMHTGS 120

Query: 121 LPIHGDASAKAALYRDRFLLLSQRLSRDQHFSKPAFDIGMSHFGSCEISPIQSLVGQTGR 180
           LPIHGDASAKAALYRDRFLLLSQRLSRDQHFSKPAFD GMSHFGSCEISPIQSLVGQTGR
Sbjct: 121 LPIHGDASAKAALYRDRFLLLSQRLSRDQHFSKPAFDTGMSHFGSCEISPIQSLVGQTGR 180

Query: 181 KWVMGVISQMEDGHFYLEDLTASVEINLSSAKITTGLFTENTIIVAEGEMLVEGIFQVVT 240
           KWVMGVISQMEDGHFYLEDLTASVEINLSSAKITTGLFTENTI+VAEGEMLVEGIF+V+T
Sbjct: 181 KWVMGVISQMEDGHFYLEDLTASVEINLSSAKITTGLFTENTIVVAEGEMLVEGIFKVIT 240

Query: 241 CGFPPLEERGKSLKLLAGQDFFGDGVLPKEETLRRADLEKKAVNDMFVILSDIWLDSEEA 300
           CGFPPLE+R KSLKLLAGQDFFG G L KEETLR ADLEK+AVNDMFVILSDIWLDSEEA
Sbjct: 241 CGFPPLEDRDKSLKLLAGQDFFGGGSLTKEETLRLADLEKRAVNDMFVILSDIWLDSEEA 300

Query: 301 MGKLETILDGFENVEVVPSLFVLMGNFCSHPCNIAFNSFSSLRLQFGKLGKMIAAHPRLN 360
           MGKLETILDGFENVE+VPSLFVLMGNFCS PCN+AFNS+SSLRLQFGKLGKMIAA PRL 
Sbjct: 301 MGKLETILDGFENVEIVPSLFVLMGNFCSRPCNLAFNSYSSLRLQFGKLGKMIAARPRLK 360

Query: 361 EHSKFLFIPGPDDAGPSTVLPRCALPKYLTEELQMHVSNAIFSSNPCRVRFYTQEIVFFR 420
           EHSKFLFIPGPDDAGPSTVLPRCALPKYLTEELQMHV NAIFSSNPCRVRFYTQEIVFFR
Sbjct: 361 EHSKFLFIPGPDDAGPSTVLPRCALPKYLTEELQMHVPNAIFSSNPCRVRFYTQEIVFFR 420

Query: 421 QDLLYRMRRSCLIPPSTEETSDPFEHLVATITHQSHLCPLPLVIQPIIWNYDHCLHLYPT 480
           QDLLYRMRRSCLIPPSTEETSDPFEHLVATITHQSHLCPLPLVIQPIIWNYDHCLHLYPT
Sbjct: 421 QDLLYRMRRSCLIPPSTEETSDPFEHLVATITHQSHLCPLPLVIQPIIWNYDHCLHLYPT 480

Query: 481 PHVIVLGDRSKQQAFKYTGITCFNPGSFTNDSTFVAYRPCNQEVELSAL 529
           PHVIVLGDRSKQQAFKYTGITCFNPGSFTNDSTFVAYRPCNQEVELSAL
Sbjct: 481 PHVIVLGDRSKQQAFKYTGITCFNPGSFTNDSTFVAYRPCNQEVELSAL 528

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BLAST of CsaV3_1G032270 vs. NCBI nr
Match: XP_022949454.1 (DNA polymerase epsilon subunit B [Cucurbita moschata])

HSP 1 Score: 968.8 bits (2503), Expect = 7.7e-279
Identity = 476/529 (89.98%), Postives = 503/529 (95.09%), Query Frame = 0


Query: 1   MDTLTLRKKVQRKAKIRGLYSIKLEALDEIVSFVSRSHGFEDEAIEFVLDNLHEESLKSP 60
           MD  TLR+KVQRK+KIRG YSIKL+AL EIVSF SR  G ED+AI+ VLD+LH+ESL+S 
Sbjct: 1   MDESTLRRKVQRKSKIRG-YSIKLDALAEIVSFASRFDGCEDDAIDLVLDHLHDESLQSS 60

Query: 61  ILDKDAVHRVISIMVAADKVGEESPNTITSTSALCIINAFDIPKFRYDPIKKIF-LHTEN 120
           I+DKDAVHRV+SI++AAD+ GEE P+T TSTSALCII+AFDI K+RYDPIKKIF +HT +
Sbjct: 61  IIDKDAVHRVVSILLAADEAGEECPDTSTSTSALCIIDAFDISKYRYDPIKKIFYMHTGS 120

Query: 121 LPIHGDASAKAALYRDRFLLLSQRLSRDQHFSKPAFDIGMSHFGSCEISPIQSLVGQTGR 180
           LPIHGDASAKAALYRDRFLLLSQRLSRDQHFSKPAFD GMSHFGSCEISPIQSLVGQTGR
Sbjct: 121 LPIHGDASAKAALYRDRFLLLSQRLSRDQHFSKPAFDSGMSHFGSCEISPIQSLVGQTGR 180

Query: 181 KWVMGVISQMEDGHFYLEDLTASVEINLSSAKITTGLFTENTIIVAEGEMLVEGIFQVVT 240
           KWVMGVISQMEDGHF+LEDLTASVEINLSSAKITTGLFTENTI+VAEGEMLVEGIF+V+T
Sbjct: 181 KWVMGVISQMEDGHFFLEDLTASVEINLSSAKITTGLFTENTIVVAEGEMLVEGIFKVIT 240

Query: 241 CGFPPLEERGKSLKLLAGQDFFGDGVLPKEETLRRADLEKKAVNDMFVILSDIWLDSEEA 300
           CGFPPLE+R KSLKLLAGQDFFG G L KEETLR ADLEK+AVNDMFVILSDIWLDSEEA
Sbjct: 241 CGFPPLEDRDKSLKLLAGQDFFGGGSLTKEETLRLADLEKRAVNDMFVILSDIWLDSEEA 300

Query: 301 MGKLETILDGFENVEVVPSLFVLMGNFCSHPCNIAFNSFSSLRLQFGKLGKMIAAHPRLN 360
           MGKLETILDGFENVE+VPSLFVLMGNFCS PCN+AFNS+SSLRLQFGKLGKMIAA PRL 
Sbjct: 301 MGKLETILDGFENVEIVPSLFVLMGNFCSRPCNLAFNSYSSLRLQFGKLGKMIAARPRLK 360

Query: 361 EHSKFLFIPGPDDAGPSTVLPRCALPKYLTEELQMHVSNAIFSSNPCRVRFYTQEIVFFR 420
           EHSKFLFIPGPDDAGPSTVLPRCALPKYLTEELQMHV NAIFSSNPCRVRFYTQEIVFFR
Sbjct: 361 EHSKFLFIPGPDDAGPSTVLPRCALPKYLTEELQMHVPNAIFSSNPCRVRFYTQEIVFFR 420

Query: 421 QDLLYRMRRSCLIPPSTEETSDPFEHLVATITHQSHLCPLPLVIQPIIWNYDHCLHLYPT 480
           QDLLYRMRRSCLIPPSTEETSDPFEHLVATITHQSHLCPLPLVIQPIIWNYDHCLHLYPT
Sbjct: 421 QDLLYRMRRSCLIPPSTEETSDPFEHLVATITHQSHLCPLPLVIQPIIWNYDHCLHLYPT 480

Query: 481 PHVIVLGDRSKQQAFKYTGITCFNPGSFTNDSTFVAYRPCNQEVELSAL 529
           PHVIVLGDRSKQQAFKYTGITCFNPGSFTNDSTFVAYRPCNQEVELSAL
Sbjct: 481 PHVIVLGDRSKQQAFKYTGITCFNPGSFTNDSTFVAYRPCNQEVELSAL 528

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BLAST of CsaV3_1G032270 vs. NCBI nr
Match: XP_022998323.1 (DNA polymerase epsilon subunit B [Cucurbita maxima])

HSP 1 Score: 968.4 bits (2502), Expect = 1.0e-278
Identity = 474/529 (89.60%), Postives = 503/529 (95.09%), Query Frame = 0


Query: 1   MDTLTLRKKVQRKAKIRGLYSIKLEALDEIVSFVSRSHGFEDEAIEFVLDNLHEESLKSP 60
           MD  TLR+KVQRK+KIRG YSIKL+AL EIVSF SR  G ED+AI+ VLD+LH+ESL+S 
Sbjct: 1   MDESTLRRKVQRKSKIRG-YSIKLDALAEIVSFASRFDGCEDDAIDLVLDHLHDESLQSS 60

Query: 61  ILDKDAVHRVISIMVAADKVGEESPNTITSTSALCIINAFDIPKFRYDPIKKIF-LHTEN 120
           I+DKDAVHRV+SI++AAD+ GEE P+T TSTSALCII+AFDI K+RYDPIKKIF +HT +
Sbjct: 61  IIDKDAVHRVVSILLAADEAGEECPDTSTSTSALCIIDAFDISKYRYDPIKKIFYMHTGS 120

Query: 121 LPIHGDASAKAALYRDRFLLLSQRLSRDQHFSKPAFDIGMSHFGSCEISPIQSLVGQTGR 180
           LPIHGDASAKAALYRDRFLLLSQRLSRDQHFSKPAFD GMSHFGSCEISPIQSLVGQTGR
Sbjct: 121 LPIHGDASAKAALYRDRFLLLSQRLSRDQHFSKPAFDSGMSHFGSCEISPIQSLVGQTGR 180

Query: 181 KWVMGVISQMEDGHFYLEDLTASVEINLSSAKITTGLFTENTIIVAEGEMLVEGIFQVVT 240
           KWVMGVISQMEDGHFYLEDLTASVEINLSSAKITTGLFTENT++VAEGEMLVEGIF+V+T
Sbjct: 181 KWVMGVISQMEDGHFYLEDLTASVEINLSSAKITTGLFTENTVVVAEGEMLVEGIFKVIT 240

Query: 241 CGFPPLEERGKSLKLLAGQDFFGDGVLPKEETLRRADLEKKAVNDMFVILSDIWLDSEEA 300
           CGFPPLE+R KSLKLLAGQDFFG G L KEETLR ADLEK+A+NDMFVILSDIWLDSEEA
Sbjct: 241 CGFPPLEDRDKSLKLLAGQDFFGGGSLTKEETLRLADLEKRAINDMFVILSDIWLDSEEA 300

Query: 301 MGKLETILDGFENVEVVPSLFVLMGNFCSHPCNIAFNSFSSLRLQFGKLGKMIAAHPRLN 360
           MGKLETILDGFENVE+VPSLFVLMGNFCS PCN+AFNS+SSLRLQFGKLGKMIA+ PRL 
Sbjct: 301 MGKLETILDGFENVEIVPSLFVLMGNFCSRPCNLAFNSYSSLRLQFGKLGKMIASRPRLK 360

Query: 361 EHSKFLFIPGPDDAGPSTVLPRCALPKYLTEELQMHVSNAIFSSNPCRVRFYTQEIVFFR 420
           EHSKFLFIPGPDDAGPSTVLPRCALPKYLTEELQMHV NAIFSSNPCRVRFYTQEIVFFR
Sbjct: 361 EHSKFLFIPGPDDAGPSTVLPRCALPKYLTEELQMHVPNAIFSSNPCRVRFYTQEIVFFR 420

Query: 421 QDLLYRMRRSCLIPPSTEETSDPFEHLVATITHQSHLCPLPLVIQPIIWNYDHCLHLYPT 480
           QDLLYRMRRSCLIPPSTEETSDPFEHLVATITHQSHLCPLPLVIQPIIWNYDHCLHLYPT
Sbjct: 421 QDLLYRMRRSCLIPPSTEETSDPFEHLVATITHQSHLCPLPLVIQPIIWNYDHCLHLYPT 480

Query: 481 PHVIVLGDRSKQQAFKYTGITCFNPGSFTNDSTFVAYRPCNQEVELSAL 529
           PHVIVLGDRSKQQAFKYTGITCFNPGSFTNDSTFVAYRPCNQEVELSAL
Sbjct: 481 PHVIVLGDRSKQQAFKYTGITCFNPGSFTNDSTFVAYRPCNQEVELSAL 528

[Close]

BLAST of CsaV3_1G032270 vs. TAIR10
Match: AT5G22110.1 (DNA polymerase epsilon subunit B2)

HSP 1 Score: 736.9 bits (1901), Expect = 8.9e-213
Identity = 365/524 (69.66%), Postives = 432/524 (82.44%), Query Frame = 0


Query: 7   RKKVQRKAKIRGLYSIKLEALDEIVSFVSRSHGFED-EAIEFVLDNLHEESLKSPILDKD 66
           RKK+Q+K K RG Y++K +ALDEI+ F  +    +D EAI+ +LDNL +E+ KS  +D +
Sbjct: 8   RKKIQKKFKNRG-YNLKFDALDEILVFADQFPDDDDGEAIDLLLDNL-QETHKSSTVDAE 67

Query: 67  AVHRVISIMVAADKVGEESPNTITSTSALCIINAFDIPKFRYDPIKKIF-LHTENLPIHG 126
           +V  +I+ ++ A    EE     TS S+L II+AF +PKF YD +KK F  HT +LPIHG
Sbjct: 68  SVRGLINRLLGAHNAPEE---PTTSASSLAIIDAFLVPKFGYDSVKKKFNEHTSSLPIHG 127

Query: 127 DASAKAALYRDRFLLLSQRLSRDQHFSKPAFDIGMSHFGSCEISPIQSLVGQTGRKWVMG 186
           +ASAK ALYR+RF+LLSQR+SR +HFS+PAFD  MS F + EIS IQSL+ Q GRKWVMG
Sbjct: 128 EASAKTALYRERFMLLSQRVSRAEHFSRPAFDAEMSQFENNEISSIQSLISQRGRKWVMG 187

Query: 187 VISQMEDGHFYLEDLTASVEINLSSAKITTGLFTENTIIVAEGEMLVEGIFQVVTCGFPP 246
           VISQ+EDGHFYLEDL+ASVEI+LS AKITTG FTENTII+AEGEM V GIFQV+TCGFPP
Sbjct: 188 VISQLEDGHFYLEDLSASVEIDLSKAKITTGFFTENTIILAEGEMQVNGIFQVITCGFPP 247

Query: 247 LEERGKSLKLLAGQDFFGDGVLPKEETLRRADLEKKAVNDMFVILSDIWLDSEEAMGKLE 306
           LE+R K+LK  +  DFFG G L KEE ++ ADLE++AVND FVILSDIWLD EE M KLE
Sbjct: 248 LEDRDKTLKAHSEYDFFGGGTLTKEEMIKLADLERQAVNDTFVILSDIWLDDEEVMRKLE 307

Query: 307 TILDGFENVEVVPSLFVLMGNFCSHPCNIAFNSFSSLRLQFGKLGKMIAAHPRLNEHSKF 366
           T+LDGFE+VE VPSLFV MGNFCS PCN++F S+SSLR QFGKLG+MI  HPRL E+S+F
Sbjct: 308 TVLDGFESVETVPSLFVFMGNFCSRPCNLSFGSYSSLREQFGKLGRMIGNHPRLKENSRF 367

Query: 367 LFIPGPDDAGPSTVLPRCALPKYLTEELQMHVSNAIFSSNPCRVRFYTQEIVFFRQDLLY 426
           LFIPGP+DAGPSTVLPRCALPKYLTEEL+  + NAIFSSNPCRV+FY QEIVFFRQDLLY
Sbjct: 368 LFIPGPEDAGPSTVLPRCALPKYLTEELRNIIPNAIFSSNPCRVKFYNQEIVFFRQDLLY 427

Query: 427 RMRRSCLIPPSTEETSDPFEHLVATITHQSHLCPLPLVIQPIIWNYDHCLHLYPTPHVIV 486
           RMRRSCL+ PS+EET+DPF+HLV TITHQSHLCPLPL++QPIIWNYDH L LYPTPH IV
Sbjct: 428 RMRRSCLVTPSSEETNDPFKHLVYTITHQSHLCPLPLMVQPIIWNYDHALRLYPTPHTIV 487

Query: 487 LGDRSKQQAFKYTGITCFNPGSFTNDSTFVAYRPCNQEVELSAL 529
           LGD+S+Q+  K+ G TCFNPGSF+ DSTFVAYRP  QEVELSAL
Sbjct: 488 LGDKSEQEVCKFGGTTCFNPGSFSTDSTFVAYRPSTQEVELSAL 526

[Close]

BLAST of CsaV3_1G032270 vs. Swiss-Prot
Match: sp|Q500V9|DPB2_ARATH (DNA polymerase epsilon subunit B OS=Arabidopsis thaliana OX=3702 GN=DPB2 PE=1 SV=1)

HSP 1 Score: 736.9 bits (1901), Expect = 1.6e-211
Identity = 365/524 (69.66%), Postives = 432/524 (82.44%), Query Frame = 0


Query: 7   RKKVQRKAKIRGLYSIKLEALDEIVSFVSRSHGFED-EAIEFVLDNLHEESLKSPILDKD 66
           RKK+Q+K K RG Y++K +ALDEI+ F  +    +D EAI+ +LDNL +E+ KS  +D +
Sbjct: 8   RKKIQKKFKNRG-YNLKFDALDEILVFADQFPDDDDGEAIDLLLDNL-QETHKSSTVDAE 67

Query: 67  AVHRVISIMVAADKVGEESPNTITSTSALCIINAFDIPKFRYDPIKKIF-LHTENLPIHG 126
           +V  +I+ ++ A    EE     TS S+L II+AF +PKF YD +KK F  HT +LPIHG
Sbjct: 68  SVRGLINRLLGAHNAPEE---PTTSASSLAIIDAFLVPKFGYDSVKKKFNEHTSSLPIHG 127

Query: 127 DASAKAALYRDRFLLLSQRLSRDQHFSKPAFDIGMSHFGSCEISPIQSLVGQTGRKWVMG 186
           +ASAK ALYR+RF+LLSQR+SR +HFS+PAFD  MS F + EIS IQSL+ Q GRKWVMG
Sbjct: 128 EASAKTALYRERFMLLSQRVSRAEHFSRPAFDAEMSQFENNEISSIQSLISQRGRKWVMG 187

Query: 187 VISQMEDGHFYLEDLTASVEINLSSAKITTGLFTENTIIVAEGEMLVEGIFQVVTCGFPP 246
           VISQ+EDGHFYLEDL+ASVEI+LS AKITTG FTENTII+AEGEM V GIFQV+TCGFPP
Sbjct: 188 VISQLEDGHFYLEDLSASVEIDLSKAKITTGFFTENTIILAEGEMQVNGIFQVITCGFPP 247

Query: 247 LEERGKSLKLLAGQDFFGDGVLPKEETLRRADLEKKAVNDMFVILSDIWLDSEEAMGKLE 306
           LE+R K+LK  +  DFFG G L KEE ++ ADLE++AVND FVILSDIWLD EE M KLE
Sbjct: 248 LEDRDKTLKAHSEYDFFGGGTLTKEEMIKLADLERQAVNDTFVILSDIWLDDEEVMRKLE 307

Query: 307 TILDGFENVEVVPSLFVLMGNFCSHPCNIAFNSFSSLRLQFGKLGKMIAAHPRLNEHSKF 366
           T+LDGFE+VE VPSLFV MGNFCS PCN++F S+SSLR QFGKLG+MI  HPRL E+S+F
Sbjct: 308 TVLDGFESVETVPSLFVFMGNFCSRPCNLSFGSYSSLREQFGKLGRMIGNHPRLKENSRF 367

Query: 367 LFIPGPDDAGPSTVLPRCALPKYLTEELQMHVSNAIFSSNPCRVRFYTQEIVFFRQDLLY 426
           LFIPGP+DAGPSTVLPRCALPKYLTEEL+  + NAIFSSNPCRV+FY QEIVFFRQDLLY
Sbjct: 368 LFIPGPEDAGPSTVLPRCALPKYLTEELRNIIPNAIFSSNPCRVKFYNQEIVFFRQDLLY 427

Query: 427 RMRRSCLIPPSTEETSDPFEHLVATITHQSHLCPLPLVIQPIIWNYDHCLHLYPTPHVIV 486
           RMRRSCL+ PS+EET+DPF+HLV TITHQSHLCPLPL++QPIIWNYDH L LYPTPH IV
Sbjct: 428 RMRRSCLVTPSSEETNDPFKHLVYTITHQSHLCPLPLMVQPIIWNYDHALRLYPTPHTIV 487

Query: 487 LGDRSKQQAFKYTGITCFNPGSFTNDSTFVAYRPCNQEVELSAL 529
           LGD+S+Q+  K+ G TCFNPGSF+ DSTFVAYRP  QEVELSAL
Sbjct: 488 LGDKSEQEVCKFGGTTCFNPGSFSTDSTFVAYRPSTQEVELSAL 526

[Close]

BLAST of CsaV3_1G032270 vs. Swiss-Prot
Match: sp|Q54Y85|DPOE2_DICDI (DNA polymerase epsilon subunit 2 OS=Dictyostelium discoideum OX=44689 GN=pole2 PE=3 SV=1)

HSP 1 Score: 320.1 bits (819), Expect = 4.7e-86
Identity = 181/523 (34.61%), Postives = 304/523 (58.13%), Query Frame = 0


Query: 7   RKKVQRKAKIRGLYSIKLEALDEIVSFVSRSHGFEDEAIEFVLDNLHEESLKSPILDK-D 66
           +K++ +   + G +SIK +A+  I++ + ++ G++   I  ++DNL +   KS  L   +
Sbjct: 6   KKQITKSFSLTG-FSIKADAMKCIINRI-KNEGYD---ITQLIDNLLKNLDKSQYLQTIE 65

Query: 67  AVHRVISIMVAADKVGEESPNTITSTSALCIINAFDIPKFRYDPIKKIFLHTENL--PIH 126
              ++I  + ++D + +E         AL +I+AF+ P F +D   K F+ +EN    +H
Sbjct: 66  GCFKLIDTINSSDAIEKE---------ALKVIDAFNTPLFNFDSNSKQFIKSENFDRSLH 125

Query: 127 GDASAKAALYRDRFLLLSQRLSRDQHFSKPAFDIGMSHFGSCEISPIQSLVGQTGRKWVM 186
           G +++K+ LYR R+L + QR  R+ +FS P             I+P+ SL+G TGRK V+
Sbjct: 126 GSSNSKSDLYRKRYLKVLQRTERNDYFSTPVLASDKLKNEYQTITPLSSLLGNTGRKHVL 185

Query: 187 GVISQMEDGHFYLEDLTASVEINLSSAKITTGLFTENTIIVAEGEMLVEGIFQVVTCGFP 246
           G ISQ+E+  FY+EDL  +V+I++S AK   G+ T N+II A GE  ++G+F       P
Sbjct: 186 GTISQIEEDQFYIEDLNTNVKIDISKAKFEFGIVTINSIIQASGE-FIDGVFIADKIQLP 245

Query: 247 PLEERGKSLKLLAGQDFFGDGVLPKEETLRR-ADLEKKAVNDMFVILSDIWLDSEEAMGK 306
           P EER ++LK L   D FG+   P+++T+ +    EK+  ++  + LSD+WLDSE  M +
Sbjct: 246 PTEERCETLKFLQNIDMFGE--RPQKKTMEQLIKYEKEKEDNSILFLSDVWLDSERVMER 305

Query: 307 LETILDGFENVEVVPSLFVLMGNFCSHPCNIAFNSFSSLRLQFGKLGKMIAAHPRLNEHS 366
           L+ +  G++  +  P   +LMGNF  HP  +   +   L+  F +L  +I  +P +++ +
Sbjct: 306 LDYLFGGYK--DCPPFAMILMGNFTEHP--LINGTQYQLKKYFNQLAMVIQKYPNIHQFT 365

Query: 367 KFLFIPGPDDAGPS--TVLPRCALPKYLTEELQMHVSNAIFSSNPCRVRFYTQEIVFFRQ 426
           +F+F+PGP D   S   +LP+  +     ++    +  + F++NPCR+R+ +QEI+ FR 
Sbjct: 366 QFIFVPGPTDPTGSLLNILPKFPISNVFIKDFISLIPKSTFTTNPCRIRYCSQEIIIFRD 425

Query: 427 DLLYRMRRSCLIPPSTEETSDPFEHLVATITHQSHLCPLPLVIQPIIWNYDHCLHLYPTP 486
           DL  +MRR C++ PS  ++ D  +HL+  I   SHLC L L  +PI WNYDH + +YP P
Sbjct: 426 DLTNKMRRHCILEPS--QSCDISQHLIELICSNSHLCNLTLEDKPIYWNYDHAMSVYPLP 485

Query: 487 HVIVLGDRSKQ-QAFKYTGITCFNPGSFTNDSTFVAYRPCNQE 523
            ++V+GD+S Q +  +  G    NP SF+ D +F  Y P N++
Sbjct: 486 DLLVIGDKSNQYEHSRADGTYSMNPSSFSTDYSFAHYIPANKQ 505

[Close]

BLAST of CsaV3_1G032270 vs. Swiss-Prot
Match: sp|Q5ZKQ6|DPOE2_CHICK (DNA polymerase epsilon subunit 2 OS=Gallus gallus OX=9031 GN=POLE2 PE=2 SV=1)

HSP 1 Score: 299.3 bits (765), Expect = 8.5e-80
Identity = 182/542 (33.58%), Postives = 295/542 (54.43%), Query Frame = 0


Query: 1   MDTLTLRKKVQRKAKIRGLYSIKLEALDEIVSFVSRSHGFEDEAIEFVLDNLHEESLKSP 60
           M+   LR+++    ++RGL  ++ EA+  +   +       +E  E V+D + +   K P
Sbjct: 1   MEPERLRRRLGSAFRVRGLL-LRAEAVKYLTETL---ESLNEEEFEDVIDKIIDAVEKQP 60

Query: 61  ILDKDAVHRVISIMVAADKVGEESPNTITSTSALCIINAFDIPKFRYDPIKKIF--LHTE 120
           +     +  + ++  A  +  +    TI   +   II AFDIP++ Y+P +K F  L   
Sbjct: 61  L--STNMIELSTVEAAVQECSQALDETI--KNVFNIIGAFDIPRYIYNPDRKRFVPLSMT 120

Query: 121 NLPI---HGDASAKAALYRDRFLLLSQRLSRDQHFSKPAF----DIGMSHFGSCEISPIQ 180
           NLP+    G A  KA L+R+R+ +L QR  R + F+  A     D   S F   ++  ++
Sbjct: 121 NLPVPNLFGTARDKAELFRERYSILQQRTHRHELFTPAAVVIHPDDNRSKF---QLKTVE 180

Query: 181 SLVGQTGR---KWVMGVISQMEDGHFYLEDLTASVEINLSSAKITTGLFTENTIIVAEGE 240
           +L+G T +     V+G+I+Q+++G ++LED T  V+++LS A+  +GL+TE+  ++AEG 
Sbjct: 181 TLLGNTAKVREVIVLGMITQLKEGKYFLEDPTGVVQLDLSKAQFHSGLYTESCFVLAEG- 240

Query: 241 MLVEGIFQVVTCGFPPLEERGKSLKLLAGQDFF-GDGVLPKEETLRRADLEKKAVNDMFV 300
              + +F V   GFPP E    +       +FF G      + + +   LE +  + MFV
Sbjct: 241 WYEDEVFHVNAFGFPPTEPSATTRAFYGNINFFGGPSSASVKASAKLKQLEDENEDAMFV 300

Query: 301 ILSDIWLDSEEAMGKLETILDGFENVEVVPSLFVLMGNFCSHPCNIAFNSFSSLRLQFGK 360
            LSD+WLD  E + KL T+  G+ +    P+ F   GNF S P     N   SL+     
Sbjct: 301 FLSDVWLDQAEVLEKLHTMFSGYSSAP--PTCFFFCGNFSSAP--YGKNQIQSLKGSLKA 360

Query: 361 LGKMIAAHPRLNEHSKFLFIPGPDDAGPSTVLPRCALPKYLTEELQMHVSNAIFSSNPCR 420
           L  +I  +P +++ S+F+F+PGP+D GP +VLPR  L + +T+E +  V  ++F++NPCR
Sbjct: 361 LADIICEYPSIHKSSRFVFVPGPEDPGPGSVLPRPPLAENITQEFRQLVPFSVFTTNPCR 420

Query: 421 VRFYTQEIVFFRQDLLYRMRRSCLIPPSTEETSDPFEHLVATITHQSHLCPLPLVIQPII 480
           V++ TQEI+ FR+DL+ +M R+C+  PS+  + D   H V TI  Q HL PLPL + P+ 
Sbjct: 421 VQYCTQEIIIFREDLVNKMCRNCVRFPSS--SMDIPNHFVKTILSQGHLTPLPLYVSPVY 480

Query: 481 WNYDHCLHLYPTPHVIVLGDRSKQQAFKYTGITCFNPGSFTNDS-TFVAYRPCNQEVELS 529
           W YD+ L +YP P ++V+ D+        T   C NPGSF     +F  + P N+ VE S
Sbjct: 481 WAYDYALRVYPVPDMLVIADKYDPFTVTNTDCLCINPGSFPRSGFSFKVFYPSNKTVEDS 524

[Close]

BLAST of CsaV3_1G032270 vs. Swiss-Prot
Match: sp|A7YWS7|DPOE2_BOVIN (DNA polymerase epsilon subunit 2 OS=Bos taurus OX=9913 GN=POLE2 PE=2 SV=1)

HSP 1 Score: 293.5 bits (750), Expect = 4.7e-78
Identity = 177/535 (33.08%), Postives = 290/535 (54.21%), Query Frame = 0


Query: 6   LRKKVQRKAKIRGLYSIKLEALDEIVSFVSRSHGFE-DEAIEFVLDNLHEESLKSPILDK 65
           LR +     K+RGL  ++ EA+  +   +   +  E ++A+E ++D + ++ L S ++++
Sbjct: 6   LRSRALSAFKLRGL-MLRGEAVKYLTEALQSINEIELEDALEKIIDAVEKQPLSSNMIER 65

Query: 66  DAVHRVISIMVAADKVGEESPNTITSTSALCIINAFDIPKFRYDPIKKIFLH--TENLP- 125
             V    ++   +  V E      T      II AFDIP+F Y+  +K FL     N P 
Sbjct: 66  SVVE--AAVQECSQSVDE------TIDHIFNIIGAFDIPRFVYNSERKKFLPLLMTNHPA 125

Query: 126 --IHGDASAKAALYRDRFLLLSQRLSRDQHFSKPAFDIGMSHFGS-CEISPIQSLVGQT- 185
             + G A  KA L+R+R+ +L QR  R + F+ P         GS  ++  I++L+G T 
Sbjct: 126 PNLFGTARDKAELFRERYTILHQRTHRHELFTPPVIGSHPDESGSKFQLKTIETLLGSTS 185

Query: 186 --GRKWVMGVISQMEDGHFYLEDLTASVEINLSSAKITTGLFTENTIIVAEGEMLVEGIF 245
             G   V+G+I+Q+++G F+LED T +++++LS A+  +GL+TE+  ++AEG    + +F
Sbjct: 186 KIGDVIVLGMITQLKEGKFFLEDPTGTIQLDLSKAQFHSGLYTESCFVLAEG-WFEDQVF 245

Query: 246 QVVTCGFPPLEERGKSLKLLAGQDFFGDGVLPKEET-LRRADLEKKAVNDMFVILSDIWL 305
            V   GFPP E    +       +FFG       +T  +   LE +  + MFV +SD+WL
Sbjct: 246 HVNAFGFPPTEPSSTTRAYYGNTNFFGGPSNTSVKTSAKLKQLEDENKDAMFVFISDVWL 305

Query: 306 DSEEAMGKLETILDGFENVEVVPSLFVLMGNFCSHPCNIAFNSFSSLRLQFGKLGKMIAA 365
           D  E + KL  +  G+      P+ F+L GNF S P     N   +L+     L  +I  
Sbjct: 306 DQVEVLEKLHIMFSGYS--PAPPTCFILCGNFSSAP--YGKNQVQALKDSLKTLADIICG 365

Query: 366 HPRLNEHSKFLFIPGPDDAGPSTVLPRCALPKYLTEELQMHVSNAIFSSNPCRVRFYTQE 425
           +P +++ S+F+F+PGP+D G  ++LPR    + +T E +  V  ++F++NPCR+++ TQE
Sbjct: 366 YPNIHQSSRFVFVPGPEDPGFGSILPRPPFAESITNEFRQRVPFSVFTTNPCRIQYCTQE 425

Query: 426 IVFFRQDLLYRMRRSCLIPPSTEETSDPFEHLVATITHQSHLCPLPLVIQPIIWNYDHCL 485
           I+ FR+DL+ +M R+C+  PS+    D   H V T+  Q HL PLPL + P+ W YD+ L
Sbjct: 426 IIVFREDLVNKMCRNCVRFPSS--NLDIPNHFVKTVLSQGHLTPLPLYVCPVYWAYDYAL 485

Query: 486 HLYPTPHVIVLGDRSKQQAFKYTGITCFNPGSFTNDS-TFVAYRPCNQEVELSAL 529
            +YP P ++V+ D+        T   C NPGSF     +F  + P N+ VE S L
Sbjct: 486 RVYPVPDLLVIADKYDPFTLTNTECLCINPGSFPRSGFSFKVFYPSNKVVEDSKL 524

[Close]

BLAST of CsaV3_1G032270 vs. Swiss-Prot
Match: sp|O54956|DPOE2_MOUSE (DNA polymerase epsilon subunit 2 OS=Mus musculus OX=10090 GN=Pole2 PE=2 SV=2)

HSP 1 Score: 285.0 bits (728), Expect = 1.7e-75
Identity = 174/535 (32.52%), Postives = 283/535 (52.90%), Query Frame = 0


Query: 6   LRKKVQRKAKIRGLYSIKLEALDEIVSFVSRSHGFE-DEAIEFVLDNLHEESLKSPILDK 65
           LR +     K+RGL  ++ EA   +   +      E +E +  ++D + ++ L S ++++
Sbjct: 6   LRSRTVSAFKLRGLL-LRSEATKYLTEALQSVTELELEENLGKIIDAVEKQPLSSNMIER 65

Query: 66  DAVHRVISIMVAADKVGEESPNTITSTSALCIINAFDIPKFRYDPIKKIFLHTENL---- 125
             V        A  +  +    TI       II AFDIP+F Y+  +K FL         
Sbjct: 66  SVVE------AAVQECSQSMDETI--EHVFNIIGAFDIPRFIYNSERKKFLPLSMTNHAA 125

Query: 126 -PIHGDASAKAALYRDRFLLLSQRLSRDQHFSKPAFDIGMSHFGS-CEISPIQSLVGQT- 185
             + G A  KA LY +R+ +L QR  R + F+ P     +   GS  ++  I++L+G T 
Sbjct: 126 PTLFGTARDKAELYLERYTILHQRTHRHELFTPPVIGSHLEESGSKFQLKTIETLLGSTS 185

Query: 186 --GRKWVMGVISQMEDGHFYLEDLTASVEINLSSAKITTGLFTENTIIVAEGEMLVEGIF 245
             G   V+G+I+Q+++G F+LED T +V+++LS A+  +GL+TE   ++AEG    + +F
Sbjct: 186 KVGDVIVLGMITQLKEGKFFLEDPTGTVQLDLSKAQFHSGLYTEACFVLAEG-WFEDQVF 245

Query: 246 QVVTCGFPPLEERGKSLKLLAGQDFFGDGVLPKEETLRR-ADLEKKAVNDMFVILSDIWL 305
                GFPP E    +       +FFG       +T  +   LE +  + MFVI+SD+WL
Sbjct: 246 HANAFGFPPTEPSSTTRAYYGNINFFGGPSNASVKTYTKLRQLEDENKDAMFVIVSDVWL 305

Query: 306 DSEEAMGKLETILDGFENVEVVPSLFVLMGNFCSHPCNIAFNSFSSLRLQFGKLGKMIAA 365
           D  + + K   +  G+      P+ F+L GNF S P     N   +L+     L  +I  
Sbjct: 306 DQVQVLEKFHVMFSGYS--PAPPTCFILCGNFSSAP--YGKNQVQALKDSLKSLADIICE 365

Query: 366 HPRLNEHSKFLFIPGPDDAGPSTVLPRCALPKYLTEELQMHVSNAIFSSNPCRVRFYTQE 425
           +P +++ S+F+F+PGP+D G  ++LPR  L + +T+E +  V  ++F++NPCR+++ TQE
Sbjct: 366 YPSIHQSSRFVFVPGPEDPGFGSILPRPPLAESITQEFRQRVPFSVFTTNPCRIQYCTQE 425

Query: 426 IVFFRQDLLYRMRRSCLIPPSTEETSDPFEHLVATITHQSHLCPLPLVIQPIIWNYDHCL 485
           I+ FR+DL+ +M R+C+  PS+  + D   H V TI  Q HL PLPL + P+ W YD+ L
Sbjct: 426 IIIFREDLVNKMCRNCVRFPSS--SLDIPTHFVKTILSQGHLAPLPLYVCPVHWAYDYTL 485

Query: 486 HLYPTPHVIVLGDRSKQQAFKYTGITCFNPGSFTNDS-TFVAYRPCNQEVELSAL 529
            +YP P ++V+ D+        T   C NPGSF      F  + P ++ VE S L
Sbjct: 486 RVYPVPDLLVIADKYDPFTVTNTDCLCINPGSFPRSGFAFKVFYPSSKTVEDSKL 524

[Close]

BLAST of CsaV3_1G032270 vs. TrEMBL
Match: tr|A0A1S4DTQ5|A0A1S4DTQ5_CUCME (DNA polymerase epsilon subunit OS=Cucumis melo OX=3656 GN=LOC103501415 PE=3 SV=1)

HSP 1 Score: 1006.9 bits (2602), Expect = 1.7e-290
Identity = 497/529 (93.95%), Postives = 510/529 (96.41%), Query Frame = 0


Query: 1   MDTLTLRKKVQRKAKIRGLYSIKLEALDEIVSFVSRSHGFEDEAIEFVLDNLHEESLKSP 60
           MD LTLRKKVQRKAKIRGLYSIKLEALDEIVSFVSR HGFED+AIE VLD+LHEESLKSP
Sbjct: 1   MDALTLRKKVQRKAKIRGLYSIKLEALDEIVSFVSRFHGFEDDAIELVLDDLHEESLKSP 60

Query: 61  ILDKDAVHRVISIMVAADKVGEESPNTITSTSALCIINAFDIPKFRYDPIKKIF-LHTEN 120
           IL+KD VHRVIS ++AA++  E SPNTITST+ALCII+AFDI KFRYDPIKKIF  HT +
Sbjct: 61  ILEKDGVHRVISKLLAAEEAEEASPNTITSTTALCIIDAFDISKFRYDPIKKIFHRHTGD 120

Query: 121 LPIHGDASAKAALYRDRFLLLSQRLSRDQHFSKPAFDIGMSHFGSCEISPIQSLVGQTGR 180
           LPIHGDA AKAALYRDRFLLLSQRLSRDQHFSKPAFDIGMSHFGSCEISPIQSLVGQTGR
Sbjct: 121 LPIHGDAPAKAALYRDRFLLLSQRLSRDQHFSKPAFDIGMSHFGSCEISPIQSLVGQTGR 180

Query: 181 KWVMGVISQMEDGHFYLEDLTASVEINLSSAKITTGLFTENTIIVAEGEMLVEGIFQVVT 240
           KWVMGVISQMEDGHFYLEDLTASVEINLS+AKITTGLFTENTIIVAEGEMLVEGIFQVVT
Sbjct: 181 KWVMGVISQMEDGHFYLEDLTASVEINLSNAKITTGLFTENTIIVAEGEMLVEGIFQVVT 240

Query: 241 CGFPPLEERGKSLKLLAGQDFFGDGVLPKEETLRRADLEKKAVNDMFVILSDIWLDSEEA 300
           CGFPPLEER KSLKLLAGQDFFG GVLPKEETLR ADLEKKAVNDMFVILSDIWLDSEEA
Sbjct: 241 CGFPPLEERDKSLKLLAGQDFFGGGVLPKEETLRLADLEKKAVNDMFVILSDIWLDSEEA 300

Query: 301 MGKLETILDGFENVEVVPSLFVLMGNFCSHPCNIAFNSFSSLRLQFGKLGKMIAAHPRLN 360
           MGKLETILDGFENVEVVPSLFVLMGNFCSHPCNIAFNSFSSLRLQFGKLGKMIAAHPRLN
Sbjct: 301 MGKLETILDGFENVEVVPSLFVLMGNFCSHPCNIAFNSFSSLRLQFGKLGKMIAAHPRLN 360

Query: 361 EHSKFLFIPGPDDAGPSTVLPRCALPKYLTEELQMHVSNAIFSSNPCRVRFYTQEIVFFR 420
           +HSKF FIPGPDDAGPSTVLPRCALPKYLTEELQ+HV NA FSSNPCRVRFYTQEIVFFR
Sbjct: 361 KHSKFXFIPGPDDAGPSTVLPRCALPKYLTEELQVHVPNATFSSNPCRVRFYTQEIVFFR 420

Query: 421 QDLLYRMRRSCLIPPSTEETSDPFEHLVATITHQSHLCPLPLVIQPIIWNYDHCLHLYPT 480
           QDLLYRMRRSCLIPPSTEETSDPFEHLVATITHQSHLCPLPLVIQPIIWNYDHCLHLYPT
Sbjct: 421 QDLLYRMRRSCLIPPSTEETSDPFEHLVATITHQSHLCPLPLVIQPIIWNYDHCLHLYPT 480

Query: 481 PHVIVLGDRSKQQAFKYTGITCFNPGSFTNDSTFVAYRPCNQEVELSAL 529
           PHVIVLGDRSKQQAFKYTGITCFNPGSFTNDSTFVAYRPCNQEVELSAL
Sbjct: 481 PHVIVLGDRSKQQAFKYTGITCFNPGSFTNDSTFVAYRPCNQEVELSAL 529

[Close]

BLAST of CsaV3_1G032270 vs. TrEMBL
Match: tr|A0A2I4GYY1|A0A2I4GYY1_9ROSI (DNA polymerase epsilon subunit OS=Juglans regia OX=51240 GN=LOC109012089 PE=3 SV=1)

HSP 1 Score: 868.2 bits (2242), Expect = 9.3e-249
Identity = 411/534 (76.97%), Postives = 478/534 (89.51%), Query Frame = 0


Query: 1   MDTLTLRKKVQRKAKIRGLYSIKLEALDEIVSFVSRSHGFEDEAIEFVLDNLHEESLKSP 60
           M++ T+RKKV+RK KIRG Y++K+EALDEI+SFV+R  G +D+A++ +LD L  ESLKS 
Sbjct: 1   MNSSTIRKKVERKCKIRG-YTLKVEALDEILSFVNRFQGAQDDALDLLLDQLEHESLKSS 60

Query: 61  ILDKDAVHRVISIMVAADKVGEESPNTI-----TSTSALCIINAFDIPKFRYDPIKKIFL 120
           I+DKD VHRV+S+++ A+   E+ P+       +S S++ +I+AF +PKFRYDPIKKIF 
Sbjct: 61  IIDKDPVHRVVSLLLEAEAAAEDGPDIDGVTGGSSASSIRVIDAFLVPKFRYDPIKKIFY 120

Query: 121 -HTENLPIHGDASAKAALYRDRFLLLSQRLSRDQHFSKPAFDIGMSHFGSCEISPIQSLV 180
            HT  LPIHG+ASAKAALY+DRFL+L QRL+RDQHFSKPAFD  MSHFGSCEISPIQSLV
Sbjct: 121 EHTGGLPIHGEASAKAALYKDRFLMLFQRLARDQHFSKPAFDTEMSHFGSCEISPIQSLV 180

Query: 181 GQTGRKWVMGVISQMEDGHFYLEDLTASVEINLSSAKITTGLFTENTIIVAEGEMLVEGI 240
           GQTGR+WVMGVISQ+EDGHFYLEDLTASVEINLS+AKITTG F ENTI+VAEGEML+EG+
Sbjct: 181 GQTGRRWVMGVISQLEDGHFYLEDLTASVEINLSNAKITTGFFLENTIVVAEGEMLLEGV 240

Query: 241 FQVVTCGFPPLEERGKSLKLLAGQDFFGDGVLPKEETLRRADLEKKAVNDMFVILSDIWL 300
           FQV+TCGFPPLE+R KS KLLAG DFFG G+L KEETLR A+LEK+A+NDMFVILSDIWL
Sbjct: 241 FQVITCGFPPLEDRDKSSKLLAGHDFFGGGILTKEETLRLAELEKRAINDMFVILSDIWL 300

Query: 301 DSEEAMGKLETILDGFENVEVVPSLFVLMGNFCSHPCNIAFNSFSSLRLQFGKLGKMIAA 360
           D+EE MGKLE +LDGFE+VEVVPSLFV MGNFCSHPCN++F+S+SSLR QF KLG++I A
Sbjct: 301 DNEEVMGKLEVVLDGFESVEVVPSLFVFMGNFCSHPCNLSFHSYSSLRSQFAKLGQLIGA 360

Query: 361 HPRLNEHSKFLFIPGPDDAGPSTVLPRCALPKYLTEELQMHVSNAIFSSNPCRVRFYTQE 420
           HPRL EHS+FLFIPGPDDAGPSTVLPRCALPKYLTEELQ H+ NAIFSSNPCR++FYTQE
Sbjct: 361 HPRLKEHSRFLFIPGPDDAGPSTVLPRCALPKYLTEELQKHIPNAIFSSNPCRIKFYTQE 420

Query: 421 IVFFRQDLLYRMRRSCLIPPSTEETSDPFEHLVATITHQSHLCPLPLVIQPIIWNYDHCL 480
           IVFFRQDLLYRMRRSCL+PPSTEET+DPF+HLVATITHQSHLCPLPL++QPI+WNYDHCL
Sbjct: 421 IVFFRQDLLYRMRRSCLMPPSTEETTDPFQHLVATITHQSHLCPLPLIVQPILWNYDHCL 480

Query: 481 HLYPTPHVIVLGDRSKQQAFKYTGITCFNPGSFTNDSTFVAYRPCNQEVELSAL 529
            LYPTPH I+LGDRS+Q+AFKYTGITCFNPGSF+ND TFVAYRP  QEVELSAL
Sbjct: 481 FLYPTPHAIILGDRSEQKAFKYTGITCFNPGSFSNDYTFVAYRPSTQEVELSAL 533

[Close]

BLAST of CsaV3_1G032270 vs. TrEMBL
Match: tr|A0A2I4GYY9|A0A2I4GYY9_9ROSI (DNA polymerase epsilon subunit OS=Juglans regia OX=51240 GN=LOC109012089 PE=3 SV=1)

HSP 1 Score: 860.1 bits (2221), Expect = 2.5e-246
Identity = 411/544 (75.55%), Postives = 478/544 (87.87%), Query Frame = 0


Query: 1   MDTLTLRKKVQRKAKIRGLYSIKLEALDEIVSFVSRSHGFEDEAIEFVLDNLHEESLKSP 60
           M++ T+RKKV+RK KIRG Y++K+EALDEI+SFV+R  G +D+A++ +LD L  ESLKS 
Sbjct: 1   MNSSTIRKKVERKCKIRG-YTLKVEALDEILSFVNRFQGAQDDALDLLLDQLEHESLKSS 60

Query: 61  ILDKDAVHRVISIMVAADKVGEESPNTI-----TSTSALCIINAFDIPKFRYDPIKKIFL 120
           I+DKD VHRV+S+++ A+   E+ P+       +S S++ +I+AF +PKFRYDPIKKIF 
Sbjct: 61  IIDKDPVHRVVSLLLEAEAAAEDGPDIDGVTGGSSASSIRVIDAFLVPKFRYDPIKKIFY 120

Query: 121 -HTENLPIHGDASAKAALYRDRFLLLSQRLSRDQHFSKPAFDIGMSHFGSCEISPIQSLV 180
            HT  LPIHG+ASAKAALY+DRFL+L QRL+RDQHFSKPAFD  MSHFGSCEISPIQSLV
Sbjct: 121 EHTGGLPIHGEASAKAALYKDRFLMLFQRLARDQHFSKPAFDTEMSHFGSCEISPIQSLV 180

Query: 181 GQTGRKWVMGVISQMEDGHFYLEDLTASVEINLSSAKITTGLFTENTIIVAEGEMLVEGI 240
           GQTGR+WVMGVISQ+EDGHFYLEDLTASVEINLS+AKITTG F ENTI+VAEGEML+EG+
Sbjct: 181 GQTGRRWVMGVISQLEDGHFYLEDLTASVEINLSNAKITTGFFLENTIVVAEGEMLLEGV 240

Query: 241 FQVVTCGFPPLEERGKSLKLLAGQDFFGDGVLPKEETLRRADLEKKAVNDMFVILSDIWL 300
           FQV+TCGFPPLE+R KS KLLAG DFFG G+L KEETLR A+LEK+A+NDMFVILSDIWL
Sbjct: 241 FQVITCGFPPLEDRDKSSKLLAGHDFFGGGILTKEETLRLAELEKRAINDMFVILSDIWL 300

Query: 301 DSEEAMGKLETILDGFENVEVVPSLFVLMGNFCSHPCNIAFNSFSSLRLQFGKLGKMIAA 360
           D+EE MGKLE +LDGFE+VEVVPSLFV MGNFCSHPCN++F+S+SSLR QF KLG++I A
Sbjct: 301 DNEEVMGKLEVVLDGFESVEVVPSLFVFMGNFCSHPCNLSFHSYSSLRSQFAKLGQLIGA 360

Query: 361 HPRLNEHSKFLFIPGPDDAGPSTVLPRCALPKYLTEELQMHVSNAIFSSNPCR------- 420
           HPRL EHS+FLFIPGPDDAGPSTVLPRCALPKYLTEELQ H+ NAIFSSNPCR       
Sbjct: 361 HPRLKEHSRFLFIPGPDDAGPSTVLPRCALPKYLTEELQKHIPNAIFSSNPCRLTFLITD 420

Query: 421 ---VRFYTQEIVFFRQDLLYRMRRSCLIPPSTEETSDPFEHLVATITHQSHLCPLPLVIQ 480
              ++FYTQEIVFFRQDLLYRMRRSCL+PPSTEET+DPF+HLVATITHQSHLCPLPL++Q
Sbjct: 421 EVEIKFYTQEIVFFRQDLLYRMRRSCLMPPSTEETTDPFQHLVATITHQSHLCPLPLIVQ 480

Query: 481 PIIWNYDHCLHLYPTPHVIVLGDRSKQQAFKYTGITCFNPGSFTNDSTFVAYRPCNQEVE 529
           PI+WNYDHCL LYPTPH I+LGDRS+Q+AFKYTGITCFNPGSF+ND TFVAYRP  QEVE
Sbjct: 481 PILWNYDHCLFLYPTPHAIILGDRSEQKAFKYTGITCFNPGSFSNDYTFVAYRPSTQEVE 540

[Close]

BLAST of CsaV3_1G032270 vs. TrEMBL
Match: tr|A0A1Q3BL23|A0A1Q3BL23_CEPFO (DNA polymerase epsilon subunit OS=Cephalotus follicularis OX=3775 GN=CFOL_v3_12035 PE=3 SV=1)

HSP 1 Score: 850.1 bits (2195), Expect = 2.6e-243
Identity = 405/532 (76.13%), Postives = 475/532 (89.29%), Query Frame = 0


Query: 1   MDTLTLRKKVQRKAKIRGLYSIKLEALDEIVSFVSRSHGFEDEAIEFVLDNLHEESLKSP 60
           +D +++RK VQ+K KIRG Y++K+EAL+EI+SFV R    E+EAI+ +LD LH+++LK+ 
Sbjct: 3   VDQISIRKMVQKKFKIRG-YTLKVEALNEILSFVDRFQDAEEEAIDVLLDWLHKQTLKTS 62

Query: 61  ILDKDAVHRVISIMVAADKVGEE---SPNTITSTSALCIINAFDIPKFRYDPIKK-IFLH 120
           ILDK+ VHRVI++++ A+   E+   +P+T++S SAL II+AF +PKFR+D I+K  F H
Sbjct: 63  ILDKEPVHRVINLLLEAEAATEDHNPTPSTVSSHSALRIIDAFLVPKFRFDHIRKQFFQH 122

Query: 121 TENLPIHGDASAKAALYRDRFLLLSQRLSRDQHFSKPAFDIGMSHFGSCEISPIQSLVGQ 180
           T +LPIHG+ASAKAALYR+R LLL QR++RD HFSKPAFD  MS FGSCEISPIQSL+GQ
Sbjct: 123 TGSLPIHGEASAKAALYRERLLLLLQRVARDPHFSKPAFDTEMSSFGSCEISPIQSLIGQ 182

Query: 181 TGRKWVMGVISQMEDGHFYLEDLTASVEINLSSAKITTGLFTENTIIVAEGEMLVEGIFQ 240
           TG KWVMGVISQ+EDGHFYLEDLT+S+EINLS AKITTG F+ENTIIVAEG+ML++GIF+
Sbjct: 183 TGTKWVMGVISQLEDGHFYLEDLTSSMEINLSKAKITTGFFSENTIIVAEGKMLLDGIFE 242

Query: 241 VVTCGFPPLEERGKSLKLLAGQDFFGDGVLPKEETLRRADLEKKAVNDMFVILSDIWLDS 300
           V+TCGFPPLE+R KSLK+ AG DFFG G L +EETLR ADLEK+AVNDMFVILSDIWLD 
Sbjct: 243 VITCGFPPLEDRDKSLKITAGHDFFGSGTLTREETLRLADLEKRAVNDMFVILSDIWLDD 302

Query: 301 EEAMGKLETILDGFENVEVVPSLFVLMGNFCSHPCNIAFNSFSSLRLQFGKLGKMIAAHP 360
           +E MGKLETIL+GFE  EVVPSLFV MGNFCS PCN++FNSFSSLRLQFGKLGK+I AHP
Sbjct: 303 DEVMGKLETILNGFEGEEVVPSLFVFMGNFCSRPCNLSFNSFSSLRLQFGKLGKLIKAHP 362

Query: 361 RLNEHSKFLFIPGPDDAGPSTVLPRCALPKYLTEELQMHVSNAIFSSNPCRVRFYTQEIV 420
           RLNEHS+FLFIPGPDDAGPSTVLPRCALPKYLT+E+Q HV NAIFSSNPCR++FYTQEIV
Sbjct: 363 RLNEHSRFLFIPGPDDAGPSTVLPRCALPKYLTQEIQNHVPNAIFSSNPCRIKFYTQEIV 422

Query: 421 FFRQDLLYRMRRSCLIPPSTEETSDPFEHLVATITHQSHLCPLPLVIQPIIWNYDHCLHL 480
           FFRQDLLYRMRRSCLIPPSTEET DPF+HLVATITHQSHLCPLPL++QPIIWNYDHCLHL
Sbjct: 423 FFRQDLLYRMRRSCLIPPSTEETDDPFKHLVATITHQSHLCPLPLIVQPIIWNYDHCLHL 482

Query: 481 YPTPHVIVLGDRSKQQAFKYTGITCFNPGSFTNDSTFVAYRPCNQEVELSAL 529
           YPTPH I+LGD+S+Q+AFKYTGITCFNPGSF+NDSTFVAYRPC QEVE S+L
Sbjct: 483 YPTPHTIILGDKSEQKAFKYTGITCFNPGSFSNDSTFVAYRPCTQEVEFSSL 533

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BLAST of CsaV3_1G032270 vs. TrEMBL
Match: tr|A0A067DVL2|A0A067DVL2_CITSI (DNA polymerase epsilon subunit OS=Citrus sinensis OX=2711 GN=CISIN_1g009713mg PE=3 SV=1)

HSP 1 Score: 840.5 bits (2170), Expect = 2.1e-240
Identity = 404/524 (77.10%), Postives = 463/524 (88.36%), Query Frame = 0


Query: 7   RKKVQRKAKIRGLYSIKLEALDEIVSFVSRSHGFEDEAIEFVLDNL-HEESLKSPILDKD 66
           RKK+Q+K KIRG Y ++++ALDEI+SFV+R    EDEAI+ +LD   HE SLKS I+DK+
Sbjct: 6   RKKIQKKMKIRG-YGLRMDALDEILSFVNRFPDAEDEAIDLLLDQFEHESSLKSSIIDKE 65

Query: 67  AVHRVISIMVAADKVGEESPNTITSTSALCIINAFDIPKFRYDPIKKIFL-HTENLPIHG 126
           +V+RV S+++ A+   E    + ++ SA+ +I+AF +PKFRYD IKK F  H  +LPIHG
Sbjct: 66  SVNRVTSVLLQAEAAAEGDSGSASNHSAIRVIDAFLVPKFRYDSIKKHFYQHAGSLPIHG 125

Query: 127 DASAKAALYRDRFLLLSQRLSRDQHFSKPAFDIGMSHFGSCEISPIQSLVGQTGRKWVMG 186
           +ASAKAALYRDRFLLL QR+SRDQHFS+P+FD+  S FGSCEIS IQSLVGQTGR+WVMG
Sbjct: 126 EASAKAALYRDRFLLLFQRVSRDQHFSRPSFDVVNSEFGSCEISTIQSLVGQTGRRWVMG 185

Query: 187 VISQMEDGHFYLEDLTASVEINLSSAKITTGLFTENTIIVAEGEMLVEGIFQVVTCGFPP 246
           VISQ+EDGHFYLEDL ASVEI+LS AKITTG FTENTI+VAEGEMLV+GIFQV+TCGFPP
Sbjct: 186 VISQLEDGHFYLEDLAASVEIDLSKAKITTGFFTENTIVVAEGEMLVDGIFQVITCGFPP 245

Query: 247 LEERGKSLKLLAGQDFFGDGVLPKEETLRRADLEKKAVNDMFVILSDIWLDSEEAMGKLE 306
           LE+R +SLKLLAG DFFG G L KE+TLR ADLEK+A NDMFVILSDIWLD+EE MGKLE
Sbjct: 246 LEDRDQSLKLLAGYDFFGGGTLKKEDTLRLADLEKRAANDMFVILSDIWLDNEEVMGKLE 305

Query: 307 TILDGFENVEVVPSLFVLMGNFCSHPCNIAFNSFSSLRLQFGKLGKMIAAHPRLNEHSKF 366
            +LDGFE+VEVVPSLFV MGNFCSHPCN++F+SFSSLRLQFGKLG+MIAAHPRL EHS+F
Sbjct: 306 VVLDGFESVEVVPSLFVFMGNFCSHPCNLSFHSFSSLRLQFGKLGQMIAAHPRLKEHSRF 365

Query: 367 LFIPGPDDAGPSTVLPRCALPKYLTEELQMHVSNAIFSSNPCRVRFYTQEIVFFRQDLLY 426
           LFIPGPDDAGPSTVLPRCALPKYLTEELQ ++ NAIFSSNPCR++FYTQEIVFFRQDLLY
Sbjct: 366 LFIPGPDDAGPSTVLPRCALPKYLTEELQKYIPNAIFSSNPCRIKFYTQEIVFFRQDLLY 425

Query: 427 RMRRSCLIPPSTEETSDPFEHLVATITHQSHLCPLPLVIQPIIWNYDHCLHLYPTPHVIV 486
           RMRRSCLIPPS EET DPFEHLVATITHQSHLCPLPL +QPIIWNYDH LHLYPTPH IV
Sbjct: 426 RMRRSCLIPPSREETDDPFEHLVATITHQSHLCPLPLTVQPIIWNYDHSLHLYPTPHAIV 485

Query: 487 LGDRSKQQAFKYTGITCFNPGSFTNDSTFVAYRPCNQEVELSAL 529
           L D+S+Q+AFKYTGITCFNPGSF++DSTFVAYRPC QEVE SAL
Sbjct: 486 LADKSEQKAFKYTGITCFNPGSFSSDSTFVAYRPCTQEVEFSAL 528

The following BLAST results are available for this feature:

BLAST of CsaV3_1G032270 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_011657177.1	4.8e-310	100.00	PREDICTED: DNA polymerase epsilon subunit 2 [Cucumis sativus]	[more]
XP_016899382.1	2.5e-290	93.95	PREDICTED: LOW QUALITY PROTEIN: DNA polymerase epsilon subunit 2 [Cucumis melo]	[more]
XP_023525784.1	9.0e-280	90.36	DNA polymerase epsilon subunit B [Cucurbita pepo subsp. pepo]	[more]
XP_022949454.1	7.7e-279	89.98	DNA polymerase epsilon subunit B [Cucurbita moschata]	[more]
XP_022998323.1	1.0e-278	89.60	DNA polymerase epsilon subunit B [Cucurbita maxima]	[more]

BLAST of CsaV3_1G032270 vs. TAIR10


Match Name	E-value	Identity	Description
AT5G22110.1	8.9e-213	69.66	DNA polymerase epsilon subunit B2	[more]

BLAST of CsaV3_1G032270 vs. Swiss-Prot


Match Name	E-value	Identity	Description
sp\|Q500V9\|DPB2_ARATH	1.6e-211	69.66	DNA polymerase epsilon subunit B OS=Arabidopsis thaliana OX=3702 GN=DPB2 PE=1 SV...	[more]
sp\|Q54Y85\|DPOE2_DICDI	4.7e-86	34.61	DNA polymerase epsilon subunit 2 OS=Dictyostelium discoideum OX=44689 GN=pole2 P...	[more]
sp\|Q5ZKQ6\|DPOE2_CHICK	8.5e-80	33.58	DNA polymerase epsilon subunit 2 OS=Gallus gallus OX=9031 GN=POLE2 PE=2 SV=1	[more]
sp\|A7YWS7\|DPOE2_BOVIN	4.7e-78	33.08	DNA polymerase epsilon subunit 2 OS=Bos taurus OX=9913 GN=POLE2 PE=2 SV=1	[more]
sp\|O54956\|DPOE2_MOUSE	1.7e-75	32.52	DNA polymerase epsilon subunit 2 OS=Mus musculus OX=10090 GN=Pole2 PE=2 SV=2	[more]

BLAST of CsaV3_1G032270 vs. TrEMBL


Match Name	E-value	Identity	Description
tr\|A0A1S4DTQ5\|A0A1S4DTQ5_CUCME	1.7e-290	93.95	DNA polymerase epsilon subunit OS=Cucumis melo OX=3656 GN=LOC103501415 PE=3 SV=1	[more]
tr\|A0A2I4GYY1\|A0A2I4GYY1_9ROSI	9.3e-249	76.97	DNA polymerase epsilon subunit OS=Juglans regia OX=51240 GN=LOC109012089 PE=3 SV...	[more]
tr\|A0A2I4GYY9\|A0A2I4GYY9_9ROSI	2.5e-246	75.55	DNA polymerase epsilon subunit OS=Juglans regia OX=51240 GN=LOC109012089 PE=3 SV...	[more]
tr\|A0A1Q3BL23\|A0A1Q3BL23_CEPFO	2.6e-243	76.13	DNA polymerase epsilon subunit OS=Cephalotus follicularis OX=3775 GN=CFOL_v3_120...	[more]
tr\|A0A067DVL2\|A0A067DVL2_CITSI	2.1e-240	77.10	DNA polymerase epsilon subunit OS=Citrus sinensis OX=2711 GN=CISIN_1g009713mg PE...	[more]

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **Biological Process**
Term	Definition
GO:0006260	DNA replication
GO:0006261	DNA-dependent DNA replication

Vocabulary: **Molecular Function**
Term	Definition
GO:0003887	DNA-directed DNA polymerase activity
GO:0003677	DNA binding

Vocabulary: **Cellular Component**
Term	Definition
GO:0008622	epsilon DNA polymerase complex

Vocabulary: **INTERPRO**
Term	Definition
IPR007185	DNA_pol_alpha/epsilon_bsu
IPR016266	POLE2

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0006261	DNA-dependent DNA replication
biological_process	GO:0071897	DNA biosynthetic process
biological_process	GO:0009793	embryo development ending in seed dormancy
biological_process	GO:0051781	positive regulation of cell division
biological_process	GO:0006260	DNA replication
cellular_component	GO:0008622	epsilon DNA polymerase complex
molecular_function	GO:0003677	DNA binding
molecular_function	GO:0003887	DNA-directed DNA polymerase activity
molecular_function	GO:0070182	DNA polymerase binding

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CsaV3_1G032270.1	CsaV3_1G032270.1	mRNA

InterPro

Analysis Name: InterPro Annotations of cucumber chineselong genome (v3)
Date Performed: 2019-03-04


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR016266	DNA polymerase epsilon, subunit B	PIRSF	PIRSF000799	DNA_pol_epsilon_2	coord: 1..528 e-value: 3.3E-189 score: 627.4
IPR007185	DNA polymerase alpha/epsilon, subunit B	PFAM	PF04042	DNA_pol_E_B	coord: 286..493 e-value: 2.5E-47 score: 160.9
None	No IPR available	PANTHER	PTHR12708	DNA POLYMERASE EPSILON SUBUNIT B	coord: 4..527

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
CsaV3_1G032270	CSPI01G20940	Wild cucumber (PI 183967)	cpicucB000
CsaV3_1G032270	Cucsa.054690	Cucumber (Gy14) v1	cgycucB042
CsaV3_1G032270	CsGy1G020700	Cucumber (Gy14) v2	cgybcucB001

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:

None