CsGy1G019450.1 (mRNA) Cucumber (Gy14) v2
The following sequences are available for this feature:
Legend: CDSexon Hold the cursor over a type above to highlight its positions in the sequence below.CGCTGCACTCTCAATCGTCGTCTCAGTCGTTGCCTTTTCAATTCGCATCTCCATCTCTCTCGGCTACACTCTCAATTTTCATCTCCATCTCTCTTTTGGTTCCTCTCAATCGCCATCTCCATCTCTGCTACACTCTCAATTTTCATCTCCATCTCTCTTTTGGTTCCTCTCAATCGTCATCTCCATCTCTGCTCTCTTATTGTCGCTCCTTCCAAATCCGTCCATCGGATTTCTTCGACCTCTCGAACTCGGCTGGCGTCAAGGCATTGGAGCTTCGCATTGGCTAGGGTGAAACCCCCCTTGATGGAGATCGGGTAATTTCATTTCAAAATCCAATTTAGGGTGATTTGTTCTAGTGACTAGATTGACTAATAGAAGGAGCAGAGCAGGAAGGGATGAGTTTTTTTTTTTTTTTTATAAATATTTTGTTGACCCTTTTTCTGGGTTTAGAGGCTTTCCAATTGATGAGGAATTAAATTCAGATGATGAAAAACAATCCGAAAAAGAAAGTAGAAATCATAAGAATTCATCCAAAACGCCTCTTGTTAAAAATTGATGCGTTGTTTTCTTACTACTTTACTTTAGGTTGGATCGGTTCTCGTTCGAAAATTCTCTTTTGTTTTCCATGGTTTGTCCATATATTTTTTGCATTCAATTTTTATATCATGCAATTTTTTTCCTGTAAAATTTTTCAGGGTGGAGTCATCTTTCAGTATCCATTAAACGAAAGGTATTTTGTTTACTATATTGATATATTTTTGTTTATGATGTTGGGTTGATGAAATTTAACTTCCATTCTACTTCAATATCCATAATCAAACAAACCTATCAAAATGGCCATTACTCTACAGCTCATGGCCACTGTGAGGTATTTTTCTTCTCTCTTAAAGAAATTGATCTTTCTCTTCAACTTAGATTTTCCATTTTTCAAATGTATTTTTGATTGTGACTCAACTTACTGATATTTTGATGTATTTATGTGTTTTTGTTTTCCTTAGTGAACATGGGTTGCTATATTTTTAGAATTCAAGGACACACTAGTACAACATAAACAAGTCCTATTCAAGTAAAAGTTGTAAATATAAGTTGTGCTTACAAAAGGTGTTAATTGAGCATCTTTTTTATTTTTCATTATTTTTGTTTTCTTTTTTCTCATTACTTAGAAGTCAATTTGTTTATTTGTCTTATCCCTTTTCTCTTGTCCGAATTTTCCTTTGTCTTCATTGTACACATGAACTGAAATCTCAATCGAGGATATTTCTTTGTCAGTTTTCGATGGAAAGTTTTGCAATTGGGATGTGAGTGTAACGTTAGTTCAATTTTGACTTGGTTCTTGATGTCATATTGCCTCATGATGTCTTGGATTGTTGGGTTAGAGTTTGTTTGATAGATAACAAGATTCTTAGGATTAAATGTGATATTAGTGGATGTAAAGAAACAAGACTCGTCTGTTTAAGAGAAGTGTATATAATATGTAATTGGTCATTTGGATTACATCTTGTGAATTCTCTCGTATCATTTCTTAGTTGTAGTAGAAAAATGATTTGATGATTTCTATGGGAGCTCAAAAGCGTTGTAAAAGGGTGCTTGTAGTAGAAAAATGATTTGATGATTTCTTTATTTGTTGATTTCGTAACAATTTCTGTTTTGGGTTTGGAAAAATAACACACTAACTATTACGCAGGAGAGAATCTGTATATGGAAAAAGTGCAGGGCCACTTCCTCCTCCTCCTGAAGTCATCAATTATGACAATGCAGTTACAAACCAAATTTTGGAGAATGCAAAAGCTGAAAAACATAGTTCCTCATCTGAATCGGTAACTTTGCTTTTATTTTATTTATGGAGTTTTCTAAGAATGAGAGAACCAAACATGTGTGGCTTTACAATTACTCTAGGAAAATTTTGTTGAAATCTGGGGTTTAAGATTGATTAAGGCAACAAGTTGTGAGAGCCTTGTCTACTGAAACAAAAGAAATTTCTCTTTTGTTTAAATTTCTTTTGTTTCATGACTTCATTAATATAAATTATTAATTAAATGTCTCTTGTTCAAGGTCTGCCCCATATGCCTCACAAACCCAAAGGACATGGCTTTTGCATGTGGTCATACAGTAAGTTCTCTACCTTTGAACTTCTAACAGTGCTAATGTTTGCTAATATTTTCTAATGGAATAAAAAATGTTTGAATGGTTTCATATTCGTATTACTTGGCCAAGACACTCATGAATGTTTGAATGGTTTCATATTCGTATTATTTGGTCATACAATAGGTTTTGCTGTTAAAGTATCTTTCTAATGTTTATTTTTCCAATATTCAACTGACCTTAATTATCCACTGATTTGAATTTTTAAGTTTGTTGATTTCATGGTGATTTTTTAGGCTGCTTCAACTATTTCACAAGCATTGCATGCTATTTTATTTTAGTCAGTATACTGAATCCATTTCTTTATGTCAACTTTTCTCTGTTATATGTTTAGAATATGTTGAAAAGAATAAATAGTACCCTAAATTTATCTTTTTGAACTTAACCTTTTAGTTGATATTTTAATGAACATTTATAATTTCCCCAAGTGTTGAAGATTTTATTGGTACTTAATTTTATATTTTTATTTTTACAGACTCTGGCCTTATGTGTTTGAAGCTATTTTCTGATCGATCCATTGTAGTGATGAAGCTACGAAGCAAGTGACTGATGTTTGGTTAGTGACAAGATTTATTGTAATTTTGTTATTCATGACAATATAACCTTGTTGTATTTAGTTTCTTTGTAAAAATATATTACCCACGTTCAGTTTCTATTTTGCTTGTATTTGTCCCTTCGGAAAATTTCGATAGATTTTCTACACTTAGTTTCTTTGTAAAAATGTTATCTATGAAATCTAATGTAAATCCTATTTCATTATGTATATGTAAAGTCTTGGAATTGAATATATATGGTGAATGGTTTTATTTATATATGTTTGAGATTTGAAACTATATTTGATGAATATCAAATATCTATGAAACTGTTGCTGGACAATTACAGAACAATCATCTTTCCATTACAGCATAATTCAATTACAATTTTTTTTAAAAAAAAAATTAAAAAATGCTTGACGGTTTTAAAATGTCATGAACAATTGCAAGCTTAACGGTTTTAAACTATCATGAACAATTGCATTTTTGACGGTTGACAAATGTCAAGAACAATTACATTCTTGAGAGTTTTAAAATGTCATGAATATTAAAATTCTTGACGGGTTTAAAATGTCATAAATCAGTTCATCATTGACGGTTTTAAAATGTCATAAACAATTGCATTTTTTACGGTTGACAAATGTCAAGAACAATTACATTCTTGAGAGTTTTAAAATGTCATGAATATTAAAATTCTTGACGGGTTTAAAATGTCATAAATCAGTTCATCATTGACGGTTTTAAAATGTCATAAACGATACCAGTCTTGACGGTCCTAAAACGTCATGAACATAAGTATACTTGACGTTTATAAAACGTCAACGTTCACTATTCTTGACGTTTAATCAACCGTCAAGAACTTTGCCTTTCTTGACGCTGGCTTCAACGACAGTTTTAAAACCGTCAAGAGAGCCTTCTCTTGACAGTTTAAAAACGTCAAGAGAGCGTGTTTTTGTAGTAGTGGATATATAAGTTTGTCCTTTCCAAGAATGAGATGTATGTTGGAAAAGGTTATTTGAGTGATGGTTTGTTTAAACTAAATGTACTCGCAATTGTACCCAAAAGTATTATTAATAATAAAGTATCTACTTTTACTTATATTGTTGAGTCATTTGTTTGGCATGACAGACTAGAACATGTCAATTTCAATTCTTTCCGTAGGCTAATTAATATGAACTTGATTCCAAAATTCACTTTTGACACAAATCATAAATGTGAGGTGTTGTGAACTAAAAAATGACCAAAACATCTTTTCATTCAACTAGAAGAATTACCAAATTTTTAGGGGGTGCTTGGGGGAAGGAAAGGAATATGGAAAAAGAGATTAAGTGGAGGAAATTATTATTATAGTCCTTATTTTGGAAAACAATTATGTGAAAAGGATTATGCCAAAAAAAATTATTAATTTTTTTAATTTCTATAAAAATGTTTTTTTAATTTGTTCTGTGAACCGAATACAAAAAAAATAAAAAATAAATTTATTTGTATAAGATATTTTTTTCAATTTGTACCGTAAATCCAATGTATAAACAAATTTATTAAATTTTGTTTTCATTTGTAATTTTTTTATTTCCACCATAAATCCAATACACAAGTTTGTTTTGTTAATTTTTTTTCACTTCTATAAATCTAATTTTTTTTCATAAAAACGATAACCAACATAATTCCTGTGGAATGAAATAAATTTATTGGAAACAAATGTATTTGTTTTCCATATGCAGTTAAATAGAACATCAATTGCATAATTCATTAGTCTAACGAAAAATAAACAAAGAAAAGCAATGAAAACGGAATGAATAACTTGTCATGCGGTTGAGGCATAATGACAATCGAGGGTTATCGTGAAGAATGACCCTACAATAGGTGGGCTTCAGGGCATCAAACATGTCAAAAGATGTATGCATTATGGACGTTTTTGTTGTCACTACGATATCATACATTTGGTCAAGTTCTCTTCACTGAGGCTCGGAATGGACTTCAAGTGTGCAATTACCTCCCATCGCAAAGCAACTTCATTATGGCAGGCTTTATCTGGCCATTTTCACAATCGCCCTGAGATGCTTATTTGTACAGTCCATGGCATCGCAAATGAGGTCAAAATTATCGAATGACTACATGTCGCACTTCCTTTTGCTTCTGCTCAAACTCGGTCTAGCATTGCTGGACCTAGAAGGTCGTCTGACCATCATGTCTTCTAAGGACATGTTCATTCTCGAGCTGCACACAGTGGGAAACTCCATATTCAGCCCATCTTTCTCTCGTACTTCGTCGTTGTCGCTTGGTACATTAGACTTGATATCTACGAAGGTCTCCACACAGACCCCTATCGTGCAGTCTTTCTCGGATATGTATGACAACGCGTCG CGCTGCACTCTCAATCGTCGTCTCAGTCGTTGCCTTTTCAATTCGCATCTCCATCTCTCTCGGCTACACTCTCAATTTTCATCTCCATCTCTCTTTTGGTTCCTCTCAATCGCCATCTCCATCTCTGCTACACTCTCAATTTTCATCTCCATCTCTCTTTTGGTTCCTCTCAATCGTCATCTCCATCTCTGCTCTCTTATTGTCGCTCCTTCCAAATCCGTCCATCGGATTTCTTCGACCTCTCGAACTCGGCTGGCGTCAAGGCATTGGAGCTTCGCATTGGCTAGGGTGAAACCCCCCTTGATGGAGATCGGGTTGGATCGGTTCTCGTTCGAAAATTCTCTTTTGTTTTCCATGGGTGGAGTCATCTTTCAGTATCCATTAAACGAAAGGAGAGAATCTGTATATGGAAAAAGTGCAGGGCCACTTCCTCCTCCTCCTGAAGTCATCAATTATGACAATGCAGTTACAAACCAAATTTTGGAGAATGCAAAAGCTGAAAAACATAGTTCCTCATCTGAATCGGTCTGCCCCATATGCCTCACAAACCCAAAGGACATGGCTTTTGCATGTGACTCTGGCCTTATGTGTTTGAAGCTATTTTCTGATCGATCCATTGTAGTGATGAAGCTACGAAGCAAGCTTTATCTGGCCATTTTCACAATCGCCCTGAGATGCTTATTTGTACAGTCCATGGCATCGCAAATGAGGTCAAAATTATCGAATGACTACATGTCGCACTTCCTTTTGCTTCTGCTCAAACTCGGTCTAGCATTGCTGGACCTAGAAGGTCGTCTGACCATCATGTCTTCTAAGGACATGTTCATTCTCGAGCTGCACACAGTGGGAAACTCCATATTCAGCCCATCTTTCTCTCGTACTTCGTCGTTGTCGCTTGGTACATTAGACTTGATATCTACGAAGGTCTCCACACAGACCCCTATCGTGCAGTCTTTCTCGGATATGTATGACAACGCGTCG CGCTGCACTCTCAATCGTCGTCTCAGTCGTTGCCTTTTCAATTCGCATCTCCATCTCTCTCGGCTACACTCTCAATTTTCATCTCCATCTCTCTTTTGGTTCCTCTCAATCGCCATCTCCATCTCTGCTACACTCTCAATTTTCATCTCCATCTCTCTTTTGGTTCCTCTCAATCGTCATCTCCATCTCTGCTCTCTTATTGTCGCTCCTTCCAAATCCGTCCATCGGATTTCTTCGACCTCTCGAACTCGGCTGGCGTCAAGGCATTGGAGCTTCGCATTGGCTAGGGTGAAACCCCCCTTGATGGAGATCGGGTTGGATCGGTTCTCGTTCGAAAATTCTCTTTTGTTTTCCATGGGTGGAGTCATCTTTCAGTATCCATTAAACGAAAGGAGAGAATCTGTATATGGAAAAAGTGCAGGGCCACTTCCTCCTCCTCCTGAAGTCATCAATTATGACAATGCAGTTACAAACCAAATTTTGGAGAATGCAAAAGCTGAAAAACATAGTTCCTCATCTGAATCGGTCTGCCCCATATGCCTCACAAACCCAAAGGACATGGCTTTTGCATGTGACTCTGGCCTTATGTGTTTGAAGCTATTTTCTGATCGATCCATTGTAGTGATGAAGCTACGAAGCAAGCTTTATCTGGCCATTTTCACAATCGCCCTGAGATGCTTATTTGTACAGTCCATGGCATCGCAAATGAGGTCAAAATTATCGAATGACTACATGTCGCACTTCCTTTTGCTTCTGCTCAAACTCGGTCTAGCATTGCTGGACCTAGAAGGTCGTCTGACCATCATGTCTTCTAAGGACATGTTCATTCTCGAGCTGCACACAGTGGGAAACTCCATATTCAGCCCATCTTTCTCTCGTACTTCGTCGTTGTCGCTTGGTACATTAGACTTGATATCTACGAAGGTCTCCACACAGACCCCTATCGTGCAGTCTTTCTCGGATATGTATGACAACGCGTCG RCTLNRRLSRCLFNSHLHLSRLHSQFSSPSLFWFLSIAISISATLSIFISISLLVPLNRHLHLCSLIVAPSKSVHRISSTSRTRLASRHWSFALARVKPPLMEIGLDRFSFENSLLFSMGGVIFQYPLNERRESVYGKSAGPLPPPPEVINYDNAVTNQILENAKAEKHSSSSESVCPICLTNPKDMAFACDSGLMCLKLFSDRSIVVMKLRSKLYLAIFTIALRCLFVQSMASQMRSKLSNDYMSHFLLLLLKLGLALLDLEGRLTIMSSKDMFILELHTVGNSIFSPSFSRTSSLSLGTLDLISTKVSTQTPIVQSFSDMYDNAS
BLAST of CsGy1G019450.1 vs. NCBI nr
Match: XP_008462645.1 (PREDICTED: E3 ubiquitin-protein ligase RGLG1 isoform X1 [Cucumis melo] >XP_008462646.1 PREDICTED: E3 ubiquitin-protein ligase RGLG1 isoform X1 [Cucumis melo]) HSP 1 Score: 117.5 bits (293), Expect = 8.7e-23 Identity = 55/63 (87.30%), Postives = 59/63 (93.65%), Query Frame = 0
BLAST of CsGy1G019450.1 vs. NCBI nr
Match: XP_008462648.1 (PREDICTED: E3 ubiquitin-protein ligase RGLG1 isoform X2 [Cucumis melo]) HSP 1 Score: 117.5 bits (293), Expect = 8.7e-23 Identity = 55/63 (87.30%), Postives = 59/63 (93.65%), Query Frame = 0
BLAST of CsGy1G019450.1 vs. NCBI nr
Match: KGN65402.1 (hypothetical protein Csa_1G408740 [Cucumis sativus]) HSP 1 Score: 103.6 bits (257), Expect = 1.3e-18 Identity = 63/100 (63.00%), Postives = 66/100 (66.00%), Query Frame = 0
BLAST of CsGy1G019450.1 vs. NCBI nr
Match: XP_023003248.1 (E3 ubiquitin-protein ligase RGLG3-like isoform X2 [Cucurbita maxima]) HSP 1 Score: 103.2 bits (256), Expect = 1.7e-18 Identity = 49/61 (80.33%), Postives = 53/61 (86.89%), Query Frame = 0
BLAST of CsGy1G019450.1 vs. NCBI nr
Match: XP_023003247.1 (E3 ubiquitin-protein ligase RGLG3-like isoform X1 [Cucurbita maxima]) HSP 1 Score: 103.2 bits (256), Expect = 1.7e-18 Identity = 49/61 (80.33%), Postives = 53/61 (86.89%), Query Frame = 0
BLAST of CsGy1G019450.1 vs. TAIR10
Match: AT5G63970.1 (Copine (Calcium-dependent phospholipid-binding protein) family) HSP 1 Score: 65.1 bits (157), Expect = 9.3e-11 Identity = 34/54 (62.96%), Postives = 41/54 (75.93%), Query Frame = 0
BLAST of CsGy1G019450.1 vs. Swiss-Prot
Match: sp|Q8RX26|RGLG3_ARATH (E3 ubiquitin-protein ligase RGLG3 OS=Arabidopsis thaliana OX=3702 GN=RGLG3 PE=1 SV=1) HSP 1 Score: 65.1 bits (157), Expect = 1.7e-09 Identity = 34/54 (62.96%), Postives = 41/54 (75.93%), Query Frame = 0
BLAST of CsGy1G019450.1 vs. TrEMBL
Match: tr|A0A1S3CHF5|A0A1S3CHF5_CUCME (E3 ubiquitin-protein ligase RGLG1 isoform X1 OS=Cucumis melo OX=3656 GN=LOC103500954 PE=4 SV=1) HSP 1 Score: 117.5 bits (293), Expect = 5.7e-23 Identity = 55/63 (87.30%), Postives = 59/63 (93.65%), Query Frame = 0
BLAST of CsGy1G019450.1 vs. TrEMBL
Match: tr|A0A1S3CHE4|A0A1S3CHE4_CUCME (E3 ubiquitin-protein ligase RGLG1 isoform X2 OS=Cucumis melo OX=3656 GN=LOC103500954 PE=4 SV=1) HSP 1 Score: 117.5 bits (293), Expect = 5.7e-23 Identity = 55/63 (87.30%), Postives = 59/63 (93.65%), Query Frame = 0
BLAST of CsGy1G019450.1 vs. TrEMBL
Match: tr|A0A0A0LX17|A0A0A0LX17_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_1G408740 PE=4 SV=1) HSP 1 Score: 103.6 bits (257), Expect = 8.6e-19 Identity = 63/100 (63.00%), Postives = 66/100 (66.00%), Query Frame = 0
BLAST of CsGy1G019450.1 vs. TrEMBL
Match: tr|A0A0H4TDF1|A0A0H4TDF1_MOMCH (E3 ubiquitin-protein ligase RGLG1-like protein OS=Momordica charantia OX=3673 PE=2 SV=1) HSP 1 Score: 95.9 bits (237), Expect = 1.8e-16 Identity = 46/61 (75.41%), Postives = 51/61 (83.61%), Query Frame = 0
BLAST of CsGy1G019450.1 vs. TrEMBL
Match: tr|A0A0A0KF27|A0A0A0KF27_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G476060 PE=4 SV=1) HSP 1 Score: 89.0 bits (219), Expect = 2.2e-14 Identity = 41/44 (93.18%), Postives = 43/44 (97.73%), Query Frame = 0
The following BLAST results are available for this feature:
GO Assignments
This mRNA is annotated with the following GO terms.
This mRNA is a part of the following gene feature(s):
The following CDS feature(s) are a part of this mRNA:
The following exon feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
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