Cp4.1LG11g03490.1 (mRNA) Cucurbita pepo (Zucchini) | Cucurbit Genomics Database (CuGenDB)

Overview


Name	Cp4.1LG11g03490.1
Type	mRNA
Organism	Cucurbita pepo (Cucurbita pepo (Zucchini))
Description	PHD finger alfin-like protein
Location	Cp4.1LG11 : 1957860 .. 1962761 (+)
Sequence length	1757

Genome Viewer

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

CGGCCCAAAATCCTCCGTTCCGGACTTTCCCTCTTTTTATCCATTTCATTTAATTTTACCTTTCTCCTCCGGTTCAAGTCCGCGTTCATTTCTCTTTCTCTCTCTTCTTCCACTGTGTGTCGTCGCTCAGAGGTCAAATATTTGGCTGTTTTTTCCCTCCTTTTGCTTTCCCTTCTCTCTTCTTCCTCGCCATGCCTCTCGATCTGTAATTCATTTTCTTCTTTTCTCTTTCTCAATTCTTATCCTTATCTACACACTTCTCTGCTCTCTTTATCGCACTTCTGGAGCTTCAAGTTCTAGTTTCTCAAGGTAAGAGTTGGTAGGCTATGGACGGGGGTGCTCCGTACAATCCACGTACCGTGGAAGAGGTGTTTAGGGATTTCAAGGGCCGTAGAGCTGGTTTGATTAAGGCTCTAACTACTGGTGAACTTTTATTTCATTCTCCCTGTTAAATTGTTTTCACCTGTTGTCCTTTTGGTTTTCTCTGCTTCATTCTGCTTCGTGTTGTAATAATTTTTGTTTTTCCGTTAATTTCGTCAGATTTTTACTATTTCTGCTTTTTTGGTTGCAGATGTTGAAGAGTTCTACCAGCAATGTGATCCTGGTTTGATTTTTCGCTGCTTTTTTACGTTTTTGAATATTAGTATGCATTGTCGGAGAGGATGCTAGAAGTAATGCGTAGGAAAAGTGGTGTCTACTAGGAACTAAATTTCGATGACTGCAAATATAAATAGCTAATAAAATTTATCGATATTGATGTCTGGTTTAGTTGAGAGGTTTCCGCGGCTTATTTTCCTAAGCCAGTTTGTCATTAATTTCCGTGTTTCTTTTGTCCTTTTATTTCACCGCCTTGTCTGTAAGCAGTGCATGTGTGTGAAGCCTTCATACTTTATAACGTAAAACAGAGCACATGTTTTATATGGTAATGCAAGGATTTAATTATCTGGCCTTACAGGATGAAATCTGTAGTAAGCTGATAAGTAATGAGGTTTAATGGTAATCTTGTCGTATAATTTTAAAATGTGTAGGCTTATACTGTTCAGATATTCTAATTTCGGCGTGTAAAAAATCGTTTGATACATAATCTATAACAGTTAAAAAAGAACTAAACATACTACTTTTAACACTTTTTTTTTTTCTTGAATTATAACCCAAATAAGGGATTGTTTGGTACATCGAATCATAACCCAATTTTTCTTAAACTTCACATTTGCCAGAGAAAGAAAATCTCTGCCTTTACGGATTTCCTAGTGAGCAGTGGGAAGTCAATTTACCTGCGGAAGAGGTGCCTCCAGAGCTTCCAGAACCTGCACTGGGTATAAACTTTGCTAGAGACGGGATGCAAGAAAAGGATTGGCTATCCTTGGTTGCAGTGCATAGTGATGTTTGGCTGCTTTCTGTGGCATTTTATTTTGGAGCTAGGTTTGGATTTGATAAGACAGATAGGTATGTGTTCACCTGATCTGCCTTCGTTATTTTATGTTAATGATTCATGCATAGTATATTTTAAACTGGTCGTAGGTTGTAGCGAAGGGCTGGGCATGAGCTTCAATTGTTTCTCTCTCTCTCTCTCTCTCTGTCTTTTATTGTCTTTGAGCAGTTCTTAATTTAATATTTTGTTCAACTTTTGTTCATTTCACGTGCTCTTGGGAAACTGTTTTTCTCTGCCCTTGAATTTCTTATTTCTTTTCATGATGATGATAGGTTTTGCAACCCCATACATGCTTTTCATGATCTAAAGTTCTATAATGGGATTTTTTTTTGTGGGGTGTTATATTTTGGTTATTGTTTTAGATTGAATTGGTATTAGCCAATCTCTTTCTTATAAGGTTTTATTTCAAACTATAATTTTTTTTTTCATATTATATGTTTTATACAAGGAAACACAAACGCATTTGTGATTGCTCAATATGTGTTTCACACTTGTTGAATATATTGGACACGCGTTGGTTACTTGTCTAACACATGACACACATGTACGCTTGTTGAACACATTGGATGGACATATTTGAGACAATTATTGAGCACTTCGTTTCAAGTGTTAAGCTATTTATTTGTTATTCTGTTAGAAATGCTATTAGGATAGGAAATAAGTAATTAGATAGGGAGGTGGTTATGGAGTTTGGTTATAAATAGAGGGAATGAGGCATTACGTTGTGGCGAGTGAATTAGGGCTTGGGAGAGATCTCAAGAGGGAGGGTGTAACAATCTTGAATTACTTATATTGTAATTTCTTTAGATATTGCAATATAATTATCTTTGGGTGTTTTCATACAATTTCAGTGTTTGGATGCCTAACATATTATTTGAAGATTAATCAACCATAAAAACAAATATGGGAGAATACTTACAAATTTTGATCGCAATGAGTTCTTTAAAGTATTTAAGCATTTAATGATGGCCGATTTTTGTTTCTCTTTTCTATAACTGTCGAGTCATTCAGTAACATGTTTAGTTGGTTCTTGATTCTTTTACTATTAGAAATTGCATCATTAAATACATATGCGATATCTATAATAAATTAACGTTCTACATTGTACATTTCATGACAATTTTTAAATAAAAAATTCATCATTTCTTCTATATTATATTCTAAATGAAAAGACCATACAATGTATTTTTTTTATATATAAAAACATTAAAATATAGGATATGTTCAAATATGTTTTAAGTTAAATTACAAGTTTAGTCTTTTAACGGATTGTGTCTAATAAGTCCTTGAACATTAAAGTGTTTGATAAGTCCTTGAACTTTCAATTTTGTGTCTAACAAGTTCTTGAGTGTCTAAAAGGTTTTTAAACTTTCAAGTTTGTGTTGGTAGGTTCTTGACCTATTTGAAACACCTAAAAATTTATGAGTATATTAGTAATAAATTAGACACAAAATTAGAAGTTCAAGGATGATAATTTGAAAGTTTCAGAAATCTATTACTCTTTTTTAAAATTCAGAGGCTTATTGACACAAACATAATAGTTTAGGCACTAAACTTGTTATTTAACCTACATTCTGAAAATTTTAAATTTTATTAAGCATGCTCCTGCATGCTCGTGTCCTCACTTTACAGAAAATGATTGCACAGTGTCTATGGCATGGCGTGGTGTCATAGGCTTTATCTTCCTCCTATACATGCCTGGTTTTCCAAAGGAGCTGTTCTCTTGACCGTTTTTGGGATTTGCAACATTCTTTGCAAGATGGATACGGTTGTATTCTTTCATTTTTTCAATGTAAGCTTGGTTTTAATCAACTGTGGTTTGGCCATAGTCATTGGTGTCAGTGAAAAATAATCAGGGTTGAGGAAATGAGTTCAAATCATAAGGCCACCTACCTTGGATTTAAAGTTCTATCAGTATTTACACGGCACATTTCATCATTGTGGTTGCTTCATTACAACAGGGTCCATTACTTAGTCTTTCTAGTAGTTTGGGTCTATTTTGGGCTGTCATTTTGTTGGTCTGGGTTGCTGGTCTTCTCTCGACTTTCTTGTATTCTTTTATTTTTATCTTAGTCATAATTTGGTTCCTGATGAAGTTTCCATGACTGGGGATTCAAGTTTCTATTGCTTTTGTTGCAGGAAGCGTCTATTTAATATGATAAATGATCTTCCAACAATATTTGAAGTGGTGACAGGGACAGCCAAAAAACAAGTTAAGGATAAATCATCAGTTTCAAATCATAGCAGTAATAAATCTAAATCAAATCCAAAGGTTTGAAAGAATTTTTTTATCCTGCTTTCTCCTGTTTTTAGTTTTTCCTAGCCAATTCGGCTTAAAATGAGACACAAAACTGCTGATGATTTTTAATTGCTCTAATGGTTTGGCTGAGGTGCCTGTAGAAAACCAGTCGACCTGCATACCATACTAGAGTATTCTTTGATTACTGGTTCTCTTTGCTTAGTATGTGTTTCAATCCGTGTGGGAGGCAACTTACTAAGCATATTATTTGGCATATATTTGCAATATACAGCGGAGTTCCGAACCTCAAATAAAAAGTGCGAAAGCGGTTCAATCGAAGGACGAGGATGAGGAAGGCTTGGAAGAGGAAGACGAAGAAGAACATGGAGAAACACTTTGTGGAGCTTGCGGAGAGAATTATGCATCTGATGAGTTCTGGATTTGCTGTGACATATGTGAGAAATGGTTCCATGGGAAGTGTGTCAAGATCACTCCGGCAAGGGCAGAGCACATTAAGCAGTATAAATGTCCATCTTGCAGCAACAAGCGAATCCGACCCTGATGTGTTTACACGGCACGCATGGTAGGTATTTGCAACAACCTCCCCTCCCTCCCCAAACCAAAGGAAAAAAAGGGGAAAAAAAAAGAGAGGAAAATGAACCAAGAGATAGTCAAATGTTGCTTCCCTTAGGATCTCAGTGTAGACCACTAATTGTGTATTAGGATTAGTTTAAACTTTAAATTAGGACTGTGGTTAGGTTGGAAATTTACATTCTATGTTATTTGTGGACAAACTCCTTTCTGTTTGTGTATTGTATGAACTACTTGTATTTTGTATGTGGTATAATATGTTACTGTCAAAAGTTTATACTTGTCAGGATGCCCATCTCCATTGTACGTGCCGTTGGGGTCACGAGAGAGTTTTCGTTCGCTTCGTGGGTTCACTATGTGTTAAGGTTAGTCACTCTCTCATTTATCATCTCAATACCTATCTCTATTAGGACGCTTGGAATTAAGAATTAGGCTGAACATATCCTACTCAAGTCTTTGTAGACTAGTTTGCTGCTTACAATTAACCATTTACATCACTTACCACTAGGCAACATTTTAGATACCCAAACGTGAGGATTTGTTTGGAGTTTTCTTTAAACAATTCTCTCGCAGATATCTTGTAATTGATGGCTTCTGTTCTAACTTGAAATCATTATAATTGACTAGAAAGAACTTTAGG

mRNA sequence

CGGCCCAAAATCCTCCGTTCCGGACTTTCCCTCTTTTTATCCATTTCATTTAATTTTACCTTTCTCCTCCGGTTCAAGTCCGCGTTCATTTCTCTTTCTCTCTCTTCTTCCACTGTGTGTCGTCGCTCAGAGGTCAAATATTTGGCTGTTTTTTCCCTCCTTTTGCTTTCCCTTCTCTCTTCTTCCTCGCCATGCCTCTCGATCTGTAATTCATTTTCTTCTTTTCTCTTTCTCAATTCTTATCCTTATCTACACACTTCTCTGCTCTCTTTATCGCACTTCTGGAGCTTCAAGTTCTAGTTTCTCAAGGTAAGAGTTGGTAGGCTATGGACGGGGGTGCTCCGTACAATCCACGTACCGTGGAAGAGGTGTTTAGGGATTTCAAGGGCCGTAGAGCTGGTTTGATTAAGGCTCTAACTACTGATGTTGAAGAGTTCTACCAGCAATGTGATCCTGAGAAAGAAAATCTCTGCCTTTACGGATTTCCTAGTGAGCAGTGGGAAGTCAATTTACCTGCGGAAGAGGTGCCTCCAGAGCTTCCAGAACCTGCACTGGGTATAAACTTTGCTAGAGACGGGATGCAAGAAAAGGATTGGCTATCCTTGGTTGCAGTGCATAGTGATGTTTGGCTGCTTTCTGTGGCATTTTATTTTGGAGCTAGGTTTGGATTTGATAAGACAGATAGGAAGCGTCTATTTAATATGATAAATGATCTTCCAACAATATTTGAAGTGGTGACAGGGACAGCCAAAAAACAAGTTAAGGATAAATCATCAGTTTCAAATCATAGCAGTAATAAATCTAAATCAAATCCAAAGCGGAGTTCCGAACCTCAAATAAAAAGTGCGAAAGCGGTTCAATCGAAGGACGAGGATGAGGAAGGCTTGGAAGAGGAAGACGAAGAAGAACATGGAGAAACACTTTGTGGAGCTTGCGGAGAGAATTATGCATCTGATGAGTTCTGGATTTGCTGTGACATATGTGAGAAATGGTTCCATGGGAAGTGTGTCAAGATCACTCCGGCAAGGGCAGAGCACATTAAGCAGTATAAATGTCCATCTTGCAGCAACAAGCGAATCCGACCCTGATGTGTTTACACGGCACGCATGGTAGGTATTTGCAACAACCTCCCCTCCCTCCCCAAACCAAAGGAAAAAAAGGGGAAAAAAAAAGAGAGGAAAATGAACCAAGAGATAGTCAAATGTTGCTTCCCTTAGGATCTCAGTGTAGACCACTAATTGTGTATTAGGATTAGTTTAAACTTTAAATTAGGACTGTGGTTAGGTTGGAAATTTACATTCTATGTTATTTGTGGACAAACTCCTTTCTGTTTGTGTATTGTATGAACTACTTGTATTTTGTATGTGGTATAATATGTTACTGTCAAAAGTTTATACTTGTCAGGATGCCCATCTCCATTGTACGTGCCGTTGGGGTCACGAGAGAGTTTTCGTTCGCTTCGTGGGTTCACTATGTGTTAAGGTTAGTCACTCTCTCATTTATCATCTCAATACCTATCTCTATTAGGACGCTTGGAATTAAGAATTAGGCTGAACATATCCTACTCAAGTCTTTGTAGACTAGTTTGCTGCTTACAATTAACCATTTACATCACTTACCACTAGGCAACATTTTAGATACCCAAACGTGAGGATTTGTTTGGAGTTTTCTTTAAACAATTCTCTCGCAGATATCTTGTAATTGATGGCTTCTGTTCTAACTTGAAATCATTATAATTGACTAGAAAGAACTTTAGG

Coding sequence (CDS)

ATGGACGGGGGTGCTCCGTACAATCCACGTACCGTGGAAGAGGTGTTTAGGGATTTCAAGGGCCGTAGAGCTGGTTTGATTAAGGCTCTAACTACTGATGTTGAAGAGTTCTACCAGCAATGTGATCCTGAGAAAGAAAATCTCTGCCTTTACGGATTTCCTAGTGAGCAGTGGGAAGTCAATTTACCTGCGGAAGAGGTGCCTCCAGAGCTTCCAGAACCTGCACTGGGTATAAACTTTGCTAGAGACGGGATGCAAGAAAAGGATTGGCTATCCTTGGTTGCAGTGCATAGTGATGTTTGGCTGCTTTCTGTGGCATTTTATTTTGGAGCTAGGTTTGGATTTGATAAGACAGATAGGAAGCGTCTATTTAATATGATAAATGATCTTCCAACAATATTTGAAGTGGTGACAGGGACAGCCAAAAAACAAGTTAAGGATAAATCATCAGTTTCAAATCATAGCAGTAATAAATCTAAATCAAATCCAAAGCGGAGTTCCGAACCTCAAATAAAAAGTGCGAAAGCGGTTCAATCGAAGGACGAGGATGAGGAAGGCTTGGAAGAGGAAGACGAAGAAGAACATGGAGAAACACTTTGTGGAGCTTGCGGAGAGAATTATGCATCTGATGAGTTCTGGATTTGCTGTGACATATGTGAGAAATGGTTCCATGGGAAGTGTGTCAAGATCACTCCGGCAAGGGCAGAGCACATTAAGCAGTATAAATGTCCATCTTGCAGCAACAAGCGAATCCGACCCTGA

Protein sequence

MDGGAPYNPRTVEEVFRDFKGRRAGLIKALTTDVEEFYQQCDPEKENLCLYGFPSEQWEVNLPAEEVPPELPEPALGINFARDGMQEKDWLSLVAVHSDVWLLSVAFYFGARFGFDKTDRKRLFNMINDLPTIFEVVTGTAKKQVKDKSSVSNHSSNKSKSNPKRSSEPQIKSAKAVQSKDEDEEGLEEEDEEEHGETLCGACGENYASDEFWICCDICEKWFHGKCVKITPARAEHIKQYKCPSCSNKRIRP

Homology

[Close]

BLAST of Cp4.1LG11g03490.1 vs. Swiss-Prot
Match: ALFL4_ARATH (PHD finger protein ALFIN-LIKE 4 OS=Arabidopsis thaliana GN=AL4 PE=1 SV=2)

HSP 1 Score: 430.3 bits (1105), Expect = 1.5e-119
Identity = 206/254 (81.10%), Postives = 226/254 (88.98%), Query Frame = 1


Query: 1   MDGGAPYNPRTVEEVFRDFKGRRAGLIKALTTDVEEFYQQCDPEKENLCLYGFPSEQWEV 60
           M+ G  YNPRTVEEVFRDFKGRRAG+IKALTTDV+EF++ CDPEKENLCLYG P+E WEV
Sbjct: 1   MEAGGAYNPRTVEEVFRDFKGRRAGMIKALTTDVQEFFRLCDPEKENLCLYGHPNEHWEV 60

Query: 61  NLPAEEVPPELPEPALGINFARDGMQEKDWLSLVAVHSDVWLLSVAFYFGARFGFDKTDR 120
           NLPAEEVPPELPEP LGINFARDGM EKDWLSLVAVHSD WLL+VAF+FGARFGFDK DR
Sbjct: 61  NLPAEEVPPELPEPVLGINFARDGMAEKDWLSLVAVHSDAWLLAVAFFFGARFGFDKADR 120

Query: 121 KRLFNMINDLPTIFEVVTGTAKKQVKDKSSVSNHSSNKSKSNPKRSSEPQIKSAKAVQSK 180
           KRLFNM+NDLPTIFEVV GTAKKQ KDKSSVSN+SSN+SKS+ KR SE + K +K     
Sbjct: 121 KRLFNMVNDLPTIFEVVAGTAKKQGKDKSSVSNNSSNRSKSSSKRGSESRAKFSKPEPKD 180

Query: 181 D--EDEEGLEEEDEEEHGETLCGACGENYASDEFWICCDICEKWFHGKCVKITPARAEHI 240
           D  E+EEG+EEEDE+E GET CGACGE+YA+DEFWICCD+CE WFHGKCVKITPARAEHI
Sbjct: 181 DEEEEEEGVEEEDEDEQGETQCGACGESYAADEFWICCDLCEMWFHGKCVKITPARAEHI 240

Query: 241 KQYKCPSCSNKRIR 253
           KQYKCPSCSNKR R
Sbjct: 241 KQYKCPSCSNKRAR 254

[Close]

BLAST of Cp4.1LG11g03490.1 vs. Swiss-Prot
Match: ALFL5_ARATH (PHD finger protein ALFIN-LIKE 5 OS=Arabidopsis thaliana GN=AL5 PE=2 SV=1)

HSP 1 Score: 410.2 bits (1053), Expect = 1.6e-113
Identity = 195/261 (74.71%), Postives = 229/261 (87.74%), Query Frame = 1


Query: 1   MDGG-APYNPRTVEEVFRDFKGRRAGLIKALTTDVEEFYQQCDPEKENLCLYGFPSEQWE 60
           M+GG A Y+PRTVEEVFRDFKGRRAG+I+ALTTDVE+F+QQCDPEK+NLCLYGFP+E WE
Sbjct: 1   MEGGTAHYSPRTVEEVFRDFKGRRAGIIQALTTDVEDFFQQCDPEKQNLCLYGFPNEVWE 60

Query: 61  VNLPAEEVPPELPEPALGINFARDGMQEKDWLSLVAVHSDVWLLSVAFYFGARFGFDKTD 120
           VNLPAEEVPPELPEPALGINFARDGMQE++WLSLVAVHSD WLLSV+FYFG+RFGFD+ D
Sbjct: 61  VNLPAEEVPPELPEPALGINFARDGMQERNWLSLVAVHSDAWLLSVSFYFGSRFGFDRAD 120

Query: 121 RKRLFNMINDLPTIFEVVTGTAKKQVKDKSSVSNHSSNKSKSNPKRSSEPQIKSAKAVQS 180
           RKRLF+MIN++PT++EVVTG A+KQ K+  S +N + N+SKSN K     + KS+K + +
Sbjct: 121 RKRLFSMINEVPTVYEVVTGNAEKQTKEMPSSANQNGNRSKSNSKMRG-LESKSSKTIHA 180

Query: 181 KDEDE-------EGLEEEDEEEHGETLCGACGENYASDEFWICCDICEKWFHGKCVKITP 240
           KDE+E       E  E+EDE+EHGETLCGACG+NYASDEFWICCD+CEKWFHG+CVKITP
Sbjct: 181 KDEEEGLELEEGEEEEDEDEDEHGETLCGACGDNYASDEFWICCDMCEKWFHGECVKITP 240

Query: 241 ARAEHIKQYKCPSCSNKRIRP 254
           ARAEHIK YKCP+CSNKR RP
Sbjct: 241 ARAEHIKHYKCPTCSNKRARP 260

[Close]

BLAST of Cp4.1LG11g03490.1 vs. Swiss-Prot
Match: ALFL3_ARATH (PHD finger protein ALFIN-LIKE 3 OS=Arabidopsis thaliana GN=AL3 PE=1 SV=1)

HSP 1 Score: 405.2 bits (1040), Expect = 5.2e-112
Identity = 197/254 (77.56%), Postives = 225/254 (88.58%), Query Frame = 1


Query: 1   MDGGAP-YNPRTVEEVFRDFKGRRAGLIKALTTDVEEFYQQCDPEKENLCLYGFPSEQWE 60
           M+GGA  YNPRTVEEVF+DFKGRR  ++KALTTDV+EFYQQCDPEKENLCLYG P+E+WE
Sbjct: 1   MEGGAALYNPRTVEEVFKDFKGRRTAIVKALTTDVQEFYQQCDPEKENLCLYGLPNEEWE 60

Query: 61  VNLPAEEVPPELPEPALGINFARDGMQEKDWLSLVAVHSDVWLLSVAFYFGARFGFDKTD 120
           VNLPAEEVPPELPEPALGINFARDG+ EK+WLSLVA+HSD WLLSV+FYFG+RF F K +
Sbjct: 61  VNLPAEEVPPELPEPALGINFARDGLSEKEWLSLVAIHSDAWLLSVSFYFGSRFSFHKEE 120

Query: 121 RKRLFNMINDLPTIFEVVTGTAKKQVKDKSSVSNHSSNKSKSNPK-RSSEPQIKSAKAVQ 180
           RKRLFNMIND+PTIFEVVTG AK   KDKSS +N + NKSKSN K R+SE   KS+K  Q
Sbjct: 121 RKRLFNMINDVPTIFEVVTGMAK--AKDKSSAANQNGNKSKSNSKVRTSEG--KSSKTKQ 180

Query: 181 SKDEDEEGLEEEDEEEHGETLCGACGENYASDEFWICCDICEKWFHGKCVKITPARAEHI 240
            K+EDEE ++E+DE++HGETLCGACG++  +DEFWICCD+CEKWFHGKCVKITPARAEHI
Sbjct: 181 PKEEDEE-IDEDDEDDHGETLCGACGDSDGADEFWICCDLCEKWFHGKCVKITPARAEHI 240

Query: 241 KQYKCPSCSNKRIR 253
           KQYKCPSCSNKR R
Sbjct: 241 KQYKCPSCSNKRAR 249

[Close]

BLAST of Cp4.1LG11g03490.1 vs. Swiss-Prot
Match: ALFL9_ORYSI (PHD finger protein ALFIN-LIKE 9 OS=Oryza sativa subsp. indica GN=OsI_26819 PE=3 SV=1)

HSP 1 Score: 392.5 bits (1007), Expect = 3.5e-108
Identity = 194/259 (74.90%), Postives = 212/259 (81.85%), Query Frame = 1


Query: 5   APYNPRTVEEVFRDFKGRRAGLIKALTTDVEEFYQQCDPEKENLCLYGFPSEQWEVNLPA 64
           A YNPRTVEEVFRDFKGRRAGL++ALT DVE+F++QCDPEKENLCLYGFP+E WEVNLPA
Sbjct: 3   AQYNPRTVEEVFRDFKGRRAGLVRALTADVEDFFRQCDPEKENLCLYGFPNEHWEVNLPA 62

Query: 65  EEVPPELPEPALGINFARDGMQEKDWLSLVAVHSDVWLLSVAFYFGARFGFDKTDRKRLF 124
           EEVPPELPEPALGINFARDGMQEKDWLS+VAVHSD WLLSVAFYFGARFGFDK DRKRLF
Sbjct: 63  EEVPPELPEPALGINFARDGMQEKDWLSMVAVHSDAWLLSVAFYFGARFGFDKNDRKRLF 122

Query: 125 NMINDLPTIFEVVTGTAKKQVKDKSSVSNHSSNKSK-SNPKRSSEPQIKSAKAVQSKDED 184
            MINDLPTIFEVV+G +K +     S +NHS++KSK SN  +SSEP+ K  K        
Sbjct: 123 GMINDLPTIFEVVSGKSKAK---PPSANNHSNSKSKSSNKTKSSEPRAKQPKPQPQPPVK 182

Query: 185 EEGLEEED---------------EEEHGETLCGACGENYASDEFWICCDICEKWFHGKCV 244
            EG EEE                EEEHGETLCGACGE+Y +DEFWICCDICEKWFHGKCV
Sbjct: 183 NEGREEEGGPDDEEGGGGGGGGREEEHGETLCGACGESYGADEFWICCDICEKWFHGKCV 242

Query: 245 KITPARAEHIKQYKCPSCS 248
           KITPA+AEHIKQYKCPSCS
Sbjct: 243 KITPAKAEHIKQYKCPSCS 258

[Close]

BLAST of Cp4.1LG11g03490.1 vs. Swiss-Prot
Match: ALFL9_ORYSJ (PHD finger protein ALFIN-LIKE 9 OS=Oryza sativa subsp. japonica GN=Os07g0608400 PE=2 SV=1)

HSP 1 Score: 392.1 bits (1006), Expect = 4.6e-108
Identity = 194/260 (74.62%), Postives = 212/260 (81.54%), Query Frame = 1


Query: 5   APYNPRTVEEVFRDFKGRRAGLIKALTTDVEEFYQQCDPEKENLCLYGFPSEQWEVNLPA 64
           A YNPRTVEEVFRDFKGRRAGL++ALT DVE+F++QCDPEKENLCLYGFP+E WEVNLPA
Sbjct: 3   AQYNPRTVEEVFRDFKGRRAGLVRALTADVEDFFRQCDPEKENLCLYGFPNEHWEVNLPA 62

Query: 65  EEVPPELPEPALGINFARDGMQEKDWLSLVAVHSDVWLLSVAFYFGARFGFDKTDRKRLF 124
           EEVPPELPEPALGINFARDGMQEKDWLS+VAVHSD WLLSVAFYFGARFGFDK DRKRLF
Sbjct: 63  EEVPPELPEPALGINFARDGMQEKDWLSMVAVHSDAWLLSVAFYFGARFGFDKNDRKRLF 122

Query: 125 NMINDLPTIFEVVTGTAKKQVKDKSSVSNHSSNKSK-SNPKRSSEPQIKSAKAVQSKDED 184
            MINDLPTIFEVV+G +K +     S +NHS++KSK SN  +SSEP+ K  K        
Sbjct: 123 GMINDLPTIFEVVSGKSKAK---PPSANNHSNSKSKSSNKTKSSEPRAKQPKPQPQPPVK 182

Query: 185 EEGLEEED----------------EEEHGETLCGACGENYASDEFWICCDICEKWFHGKC 244
            EG EEE                 EEEHGETLCGACGE+Y +DEFWICCDICEKWFHGKC
Sbjct: 183 NEGREEEGGPDDEEGGGGGGGGGREEEHGETLCGACGESYGADEFWICCDICEKWFHGKC 242

Query: 245 VKITPARAEHIKQYKCPSCS 248
           VKITPA+AEHIKQYKCPSCS
Sbjct: 243 VKITPAKAEHIKQYKCPSCS 259

[Close]

BLAST of Cp4.1LG11g03490.1 vs. TrEMBL
Match: A0A0A0KDK0_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_6G363000 PE=4 SV=1)

HSP 1 Score: 509.6 bits (1311), Expect = 2.2e-141
Identity = 248/254 (97.64%), Postives = 251/254 (98.82%), Query Frame = 1


Query: 1   MDGGAPYNPRTVEEVFRDFKGRRAGLIKALTTDVEEFYQQCDPEKENLCLYGFPSEQWEV 60
           MDGGAPYNPRTVEEVFRDFKGRRAGLIKALTTDVEEFYQQCDPEKENLCLYGFPSEQWEV
Sbjct: 1   MDGGAPYNPRTVEEVFRDFKGRRAGLIKALTTDVEEFYQQCDPEKENLCLYGFPSEQWEV 60

Query: 61  NLPAEEVPPELPEPALGINFARDGMQEKDWLSLVAVHSDVWLLSVAFYFGARFGFDKTDR 120
           NLPAEEVPPELPEPALGINFARDGMQEKDWLSLVAVHSDVWLLSVAFYFGARFGFDKTDR
Sbjct: 61  NLPAEEVPPELPEPALGINFARDGMQEKDWLSLVAVHSDVWLLSVAFYFGARFGFDKTDR 120

Query: 121 KRLFNMINDLPTIFEVVTGTAKKQVKDKSSVSNHSSNKSKSNPKRSSEPQIKSAKAVQSK 180
           KRLFNMINDLPTIFEVVTGTAKKQVKDKSSVSNHSSNKSKSN KRSSEPQIK+ KAVQSK
Sbjct: 121 KRLFNMINDLPTIFEVVTGTAKKQVKDKSSVSNHSSNKSKSNSKRSSEPQIKTTKAVQSK 180

Query: 181 DEDEE-GLEEEDEEEHGETLCGACGENYASDEFWICCDICEKWFHGKCVKITPARAEHIK 240
           DE+EE GLEEE+EEEHGETLCGACGENYASDEFWICCDICEKWFHGKCVKITPARAEHIK
Sbjct: 181 DEEEEGGLEEEEEEEHGETLCGACGENYASDEFWICCDICEKWFHGKCVKITPARAEHIK 240

Query: 241 QYKCPSCSNKRIRP 254
           QYKCPSCSNKRIRP
Sbjct: 241 QYKCPSCSNKRIRP 254

[Close]

BLAST of Cp4.1LG11g03490.1 vs. TrEMBL
Match: B9IKC9_POPTR (PHD finger family protein OS=Populus trichocarpa GN=POPTR_0018s05470g PE=4 SV=1)

HSP 1 Score: 488.0 bits (1255), Expect = 6.8e-135
Identity = 233/253 (92.09%), Postives = 244/253 (96.44%), Query Frame = 1


Query: 1   MDGGAPYNPRTVEEVFRDFKGRRAGLIKALTTDVEEFYQQCDPEKENLCLYGFPSEQWEV 60
           MDGGA YNPRTVEEVFRDFKGRRAG+IKALTTDVEEFYQQCDPEKENLCLYGFPSEQWEV
Sbjct: 1   MDGGASYNPRTVEEVFRDFKGRRAGMIKALTTDVEEFYQQCDPEKENLCLYGFPSEQWEV 60

Query: 61  NLPAEEVPPELPEPALGINFARDGMQEKDWLSLVAVHSDVWLLSVAFYFGARFGFDKTDR 120
           NLPAEEVPPELPEPALGINFARDGMQEKDWLSLVAVHSD WLLSVAFYFG+RFGFDK DR
Sbjct: 61  NLPAEEVPPELPEPALGINFARDGMQEKDWLSLVAVHSDAWLLSVAFYFGSRFGFDKADR 120

Query: 121 KRLFNMINDLPTIFEVVTGTAKKQVKDKSSVSNHSSNKSKSNPKRSSEPQIKSAKAVQSK 180
           KRLF+MINDLPTIFEVVTGTAKKQVK+KSSVSNHSSNK+KSN KR SE Q K +KA+Q+K
Sbjct: 121 KRLFSMINDLPTIFEVVTGTAKKQVKEKSSVSNHSSNKTKSNSKRGSESQGKYSKAMQAK 180

Query: 181 DEDEEGLEEEDEEEHGETLCGACGENYASDEFWICCDICEKWFHGKCVKITPARAEHIKQ 240
           DED+EGL+EEDEE+HGETLCGACGENYASDEFWICCDICEKWFHGKCVKITPARAEHIKQ
Sbjct: 181 DEDDEGLDEEDEEDHGETLCGACGENYASDEFWICCDICEKWFHGKCVKITPARAEHIKQ 240

Query: 241 YKCPSCSNKRIRP 254
           YKCPSCSNKR RP
Sbjct: 241 YKCPSCSNKRARP 253

[Close]

BLAST of Cp4.1LG11g03490.1 vs. TrEMBL
Match: B9HD31_POPTR (PHD finger family protein OS=Populus trichocarpa GN=POPTR_0006s23990g PE=4 SV=1)

HSP 1 Score: 486.5 bits (1251), Expect = 2.0e-134
Identity = 232/253 (91.70%), Postives = 242/253 (95.65%), Query Frame = 1


Query: 1   MDGGAPYNPRTVEEVFRDFKGRRAGLIKALTTDVEEFYQQCDPEKENLCLYGFPSEQWEV 60
           MDGGA YNPRTVEEVFRDFKGRRAG+IKALTTDVEEFYQQCDPEKENLCLYGFPSEQWEV
Sbjct: 1   MDGGASYNPRTVEEVFRDFKGRRAGMIKALTTDVEEFYQQCDPEKENLCLYGFPSEQWEV 60

Query: 61  NLPAEEVPPELPEPALGINFARDGMQEKDWLSLVAVHSDVWLLSVAFYFGARFGFDKTDR 120
           NLPAEEVPPELPEPALGINFARDGMQEKDWLSLVAVHSD WLLSV+FYFG+RFGFDK DR
Sbjct: 61  NLPAEEVPPELPEPALGINFARDGMQEKDWLSLVAVHSDAWLLSVSFYFGSRFGFDKADR 120

Query: 121 KRLFNMINDLPTIFEVVTGTAKKQVKDKSSVSNHSSNKSKSNPKRSSEPQIKSAKAVQSK 180
           KRLFNMINDLPT+FEVVTGTAKKQVK+KSSVSNHSSNK+KSN KR SE Q K +K +Q+K
Sbjct: 121 KRLFNMINDLPTVFEVVTGTAKKQVKEKSSVSNHSSNKTKSNSKRGSESQGKFSKVMQAK 180

Query: 181 DEDEEGLEEEDEEEHGETLCGACGENYASDEFWICCDICEKWFHGKCVKITPARAEHIKQ 240
           DED EGL+EEDEEEHGETLCGACGENYASDEFWICCDICEKWFHGKCVKITPARAEHIKQ
Sbjct: 181 DEDGEGLDEEDEEEHGETLCGACGENYASDEFWICCDICEKWFHGKCVKITPARAEHIKQ 240

Query: 241 YKCPSCSNKRIRP 254
           YKCPSCSNKR RP
Sbjct: 241 YKCPSCSNKRARP 253

[Close]

BLAST of Cp4.1LG11g03490.1 vs. TrEMBL
Match: A0A067KCV1_JATCU (Uncharacterized protein OS=Jatropha curcas GN=JCGZ_07622 PE=4 SV=1)

HSP 1 Score: 484.6 bits (1246), Expect = 7.5e-134
Identity = 231/253 (91.30%), Postives = 242/253 (95.65%), Query Frame = 1


Query: 1   MDGGAPYNPRTVEEVFRDFKGRRAGLIKALTTDVEEFYQQCDPEKENLCLYGFPSEQWEV 60
           MDGGA YNPRTVEEVFRDFKGRRAG+IKALTTDVEEFYQQCDPEKENLCLYGFPSEQWEV
Sbjct: 1   MDGGASYNPRTVEEVFRDFKGRRAGMIKALTTDVEEFYQQCDPEKENLCLYGFPSEQWEV 60

Query: 61  NLPAEEVPPELPEPALGINFARDGMQEKDWLSLVAVHSDVWLLSVAFYFGARFGFDKTDR 120
           NLPAEEVPPELPEPALGINFARDGMQEKDWLSLVAVHSD WLL+VAFYFGARFGFDK DR
Sbjct: 61  NLPAEEVPPELPEPALGINFARDGMQEKDWLSLVAVHSDAWLLAVAFYFGARFGFDKADR 120

Query: 121 KRLFNMINDLPTIFEVVTGTAKKQVKDKSSVSNHSSNKSKSNPKRSSEPQIKSAKAVQSK 180
           KRLFNMINDLPTIFEVVTGTAKKQVK+KSSVSNHSS K+KSN KR SE Q K +K +QSK
Sbjct: 121 KRLFNMINDLPTIFEVVTGTAKKQVKEKSSVSNHSSTKTKSNSKRGSESQGKYSKVMQSK 180

Query: 181 DEDEEGLEEEDEEEHGETLCGACGENYASDEFWICCDICEKWFHGKCVKITPARAEHIKQ 240
           DED++GLE+E++EEHGETLCGACGENYASDEFWICCDICEKWFHGKCVKITPARAEHIKQ
Sbjct: 181 DEDDDGLEDEEDEEHGETLCGACGENYASDEFWICCDICEKWFHGKCVKITPARAEHIKQ 240

Query: 241 YKCPSCSNKRIRP 254
           YKCPSCSNKR RP
Sbjct: 241 YKCPSCSNKRARP 253

[Close]

BLAST of Cp4.1LG11g03490.1 vs. TrEMBL
Match: U5FFQ7_POPTR (Uncharacterized protein OS=Populus trichocarpa GN=POPTR_0018s05470g PE=4 SV=1)

HSP 1 Score: 483.4 bits (1243), Expect = 1.7e-133
Identity = 233/254 (91.73%), Postives = 244/254 (96.06%), Query Frame = 1


Query: 1   MDGGAPYNPRTVEEVFRDFKGRRAGLIKALTTDVEEFYQQCDPEKENLCLYGFPSEQWEV 60
           MDGGA YNPRTVEEVFRDFKGRRAG+IKALTTDVEEFYQQCDPEKENLCLYGFPSEQWEV
Sbjct: 1   MDGGASYNPRTVEEVFRDFKGRRAGMIKALTTDVEEFYQQCDPEKENLCLYGFPSEQWEV 60

Query: 61  NLPAEEVPPELPEPALGINFARDGMQEKDWLSLVAVHSDVWLLSVAFYFGARFGFDKTDR 120
           NLPAEEVPPELPEPALGINFARDGMQEKDWLSLVAVHSD WLLSVAFYFG+RFGFDK DR
Sbjct: 61  NLPAEEVPPELPEPALGINFARDGMQEKDWLSLVAVHSDAWLLSVAFYFGSRFGFDKADR 120

Query: 121 KRLFNMINDLPTIFEVVTGTAKKQVKDKSSVSNHSSNKSKSNPK-RSSEPQIKSAKAVQS 180
           KRLF+MINDLPTIFEVVTGTAKKQVK+KSSVSNHSSNK+KSN K R SE Q K +KA+Q+
Sbjct: 121 KRLFSMINDLPTIFEVVTGTAKKQVKEKSSVSNHSSNKTKSNSKQRGSESQGKYSKAMQA 180

Query: 181 KDEDEEGLEEEDEEEHGETLCGACGENYASDEFWICCDICEKWFHGKCVKITPARAEHIK 240
           KDED+EGL+EEDEE+HGETLCGACGENYASDEFWICCDICEKWFHGKCVKITPARAEHIK
Sbjct: 181 KDEDDEGLDEEDEEDHGETLCGACGENYASDEFWICCDICEKWFHGKCVKITPARAEHIK 240

Query: 241 QYKCPSCSNKRIRP 254
           QYKCPSCSNKR RP
Sbjct: 241 QYKCPSCSNKRARP 254

[Close]

BLAST of Cp4.1LG11g03490.1 vs. TAIR10
Match: AT5G26210.1 (AT5G26210.1 alfin-like 4)

HSP 1 Score: 430.3 bits (1105), Expect = 8.5e-121
Identity = 206/254 (81.10%), Postives = 226/254 (88.98%), Query Frame = 1


Query: 1   MDGGAPYNPRTVEEVFRDFKGRRAGLIKALTTDVEEFYQQCDPEKENLCLYGFPSEQWEV 60
           M+ G  YNPRTVEEVFRDFKGRRAG+IKALTTDV+EF++ CDPEKENLCLYG P+E WEV
Sbjct: 1   MEAGGAYNPRTVEEVFRDFKGRRAGMIKALTTDVQEFFRLCDPEKENLCLYGHPNEHWEV 60

Query: 61  NLPAEEVPPELPEPALGINFARDGMQEKDWLSLVAVHSDVWLLSVAFYFGARFGFDKTDR 120
           NLPAEEVPPELPEP LGINFARDGM EKDWLSLVAVHSD WLL+VAF+FGARFGFDK DR
Sbjct: 61  NLPAEEVPPELPEPVLGINFARDGMAEKDWLSLVAVHSDAWLLAVAFFFGARFGFDKADR 120

Query: 121 KRLFNMINDLPTIFEVVTGTAKKQVKDKSSVSNHSSNKSKSNPKRSSEPQIKSAKAVQSK 180
           KRLFNM+NDLPTIFEVV GTAKKQ KDKSSVSN+SSN+SKS+ KR SE + K +K     
Sbjct: 121 KRLFNMVNDLPTIFEVVAGTAKKQGKDKSSVSNNSSNRSKSSSKRGSESRAKFSKPEPKD 180

Query: 181 D--EDEEGLEEEDEEEHGETLCGACGENYASDEFWICCDICEKWFHGKCVKITPARAEHI 240
           D  E+EEG+EEEDE+E GET CGACGE+YA+DEFWICCD+CE WFHGKCVKITPARAEHI
Sbjct: 181 DEEEEEEGVEEEDEDEQGETQCGACGESYAADEFWICCDLCEMWFHGKCVKITPARAEHI 240

Query: 241 KQYKCPSCSNKRIR 253
           KQYKCPSCSNKR R
Sbjct: 241 KQYKCPSCSNKRAR 254

[Close]

BLAST of Cp4.1LG11g03490.1 vs. TAIR10
Match: AT5G20510.1 (AT5G20510.1 alfin-like 5)

HSP 1 Score: 410.2 bits (1053), Expect = 9.1e-115
Identity = 195/261 (74.71%), Postives = 229/261 (87.74%), Query Frame = 1


Query: 1   MDGG-APYNPRTVEEVFRDFKGRRAGLIKALTTDVEEFYQQCDPEKENLCLYGFPSEQWE 60
           M+GG A Y+PRTVEEVFRDFKGRRAG+I+ALTTDVE+F+QQCDPEK+NLCLYGFP+E WE
Sbjct: 1   MEGGTAHYSPRTVEEVFRDFKGRRAGIIQALTTDVEDFFQQCDPEKQNLCLYGFPNEVWE 60

Query: 61  VNLPAEEVPPELPEPALGINFARDGMQEKDWLSLVAVHSDVWLLSVAFYFGARFGFDKTD 120
           VNLPAEEVPPELPEPALGINFARDGMQE++WLSLVAVHSD WLLSV+FYFG+RFGFD+ D
Sbjct: 61  VNLPAEEVPPELPEPALGINFARDGMQERNWLSLVAVHSDAWLLSVSFYFGSRFGFDRAD 120

Query: 121 RKRLFNMINDLPTIFEVVTGTAKKQVKDKSSVSNHSSNKSKSNPKRSSEPQIKSAKAVQS 180
           RKRLF+MIN++PT++EVVTG A+KQ K+  S +N + N+SKSN K     + KS+K + +
Sbjct: 121 RKRLFSMINEVPTVYEVVTGNAEKQTKEMPSSANQNGNRSKSNSKMRG-LESKSSKTIHA 180

Query: 181 KDEDE-------EGLEEEDEEEHGETLCGACGENYASDEFWICCDICEKWFHGKCVKITP 240
           KDE+E       E  E+EDE+EHGETLCGACG+NYASDEFWICCD+CEKWFHG+CVKITP
Sbjct: 181 KDEEEGLELEEGEEEEDEDEDEHGETLCGACGDNYASDEFWICCDMCEKWFHGECVKITP 240

Query: 241 ARAEHIKQYKCPSCSNKRIRP 254
           ARAEHIK YKCP+CSNKR RP
Sbjct: 241 ARAEHIKHYKCPTCSNKRARP 260

[Close]

BLAST of Cp4.1LG11g03490.1 vs. TAIR10
Match: AT3G42790.1 (AT3G42790.1 alfin-like 3)

HSP 1 Score: 405.2 bits (1040), Expect = 2.9e-113
Identity = 197/254 (77.56%), Postives = 225/254 (88.58%), Query Frame = 1


Query: 1   MDGGAP-YNPRTVEEVFRDFKGRRAGLIKALTTDVEEFYQQCDPEKENLCLYGFPSEQWE 60
           M+GGA  YNPRTVEEVF+DFKGRR  ++KALTTDV+EFYQQCDPEKENLCLYG P+E+WE
Sbjct: 1   MEGGAALYNPRTVEEVFKDFKGRRTAIVKALTTDVQEFYQQCDPEKENLCLYGLPNEEWE 60

Query: 61  VNLPAEEVPPELPEPALGINFARDGMQEKDWLSLVAVHSDVWLLSVAFYFGARFGFDKTD 120
           VNLPAEEVPPELPEPALGINFARDG+ EK+WLSLVA+HSD WLLSV+FYFG+RF F K +
Sbjct: 61  VNLPAEEVPPELPEPALGINFARDGLSEKEWLSLVAIHSDAWLLSVSFYFGSRFSFHKEE 120

Query: 121 RKRLFNMINDLPTIFEVVTGTAKKQVKDKSSVSNHSSNKSKSNPK-RSSEPQIKSAKAVQ 180
           RKRLFNMIND+PTIFEVVTG AK   KDKSS +N + NKSKSN K R+SE   KS+K  Q
Sbjct: 121 RKRLFNMINDVPTIFEVVTGMAK--AKDKSSAANQNGNKSKSNSKVRTSEG--KSSKTKQ 180

Query: 181 SKDEDEEGLEEEDEEEHGETLCGACGENYASDEFWICCDICEKWFHGKCVKITPARAEHI 240
            K+EDEE ++E+DE++HGETLCGACG++  +DEFWICCD+CEKWFHGKCVKITPARAEHI
Sbjct: 181 PKEEDEE-IDEDDEDDHGETLCGACGDSDGADEFWICCDLCEKWFHGKCVKITPARAEHI 240

Query: 241 KQYKCPSCSNKRIR 253
           KQYKCPSCSNKR R
Sbjct: 241 KQYKCPSCSNKRAR 249

[Close]

BLAST of Cp4.1LG11g03490.1 vs. TAIR10
Match: AT2G02470.1 (AT2G02470.1 alfin-like 6)

HSP 1 Score: 366.3 bits (939), Expect = 1.5e-101
Identity = 185/257 (71.98%), Postives = 205/257 (79.77%), Query Frame = 1


Query: 1   MDGGAPYNPRTVEEVFRDFKGRRAGLIKALTTDVEEFYQQCDPEKENLCLYGFPSEQWEV 60
           M+G     PRTVEEVF DF+GRRAGLIKALT D+ +FYQ CDPEKENLCLYG P+E WEV
Sbjct: 1   MEGITHPIPRTVEEVFSDFRGRRAGLIKALTNDMVKFYQTCDPEKENLCLYGLPNETWEV 60

Query: 61  NLPAEEVPPELPEPALGINFARDGMQEKDWLSLVAVHSDVWLLSVAFYFGARFGFDKTDR 120
           NLP EEVPPELPEPALGINFARDGMQEKDW+SLVAVHSD WLLSVAFYFGARFGF K +R
Sbjct: 61  NLPVEEVPPELPEPALGINFARDGMQEKDWVSLVAVHSDSWLLSVAFYFGARFGFGKNER 120

Query: 121 KRLFNMINDLPTIFEVVTGTAKKQVKDKSSVSNHSSNKSKSNPKRSSEPQIKSAK--AVQ 180
           KRLF MIN+LPTIFEVV+G A KQ KD S  +N+S +K      R SE   K AK  +  
Sbjct: 121 KRLFQMINELPTIFEVVSGNA-KQSKDLSVNNNNSKSKPSGVKSRQSESLSKVAKMSSPP 180

Query: 181 SKDEDEEGLEEEDEEEHGE--TLCGACGENYASDEFWICCDICEKWFHGKCVKITPARAE 240
            K+E+EE  E EDE E  E   +CGACG+NY +DEFWICCD CEKWFHGKCVKITPA+AE
Sbjct: 181 PKEEEEEEDESEDESEDDEQGAVCGACGDNYGTDEFWICCDACEKWFHGKCVKITPAKAE 240

Query: 241 HIKQYKCPSCSNKRIRP 254
           HIK YKCP+CSNKR RP
Sbjct: 241 HIKHYKCPTCSNKRARP 256

[Close]

BLAST of Cp4.1LG11g03490.1 vs. TAIR10
Match: AT1G14510.1 (AT1G14510.1 alfin-like 7)

HSP 1 Score: 365.2 bits (936), Expect = 3.4e-101
Identity = 178/243 (73.25%), Postives = 201/243 (82.72%), Query Frame = 1


Query: 9   PRTVEEVFRDFKGRRAGLIKALTTDVEEFYQQCDPEKENLCLYGFPSEQWEVNLPAEEVP 68
           PRTVEEVF DF+GRRAGLIKAL+TDV++FY QCDPEKENLCLYG P+E WEVNLP EEVP
Sbjct: 9   PRTVEEVFSDFRGRRAGLIKALSTDVQKFYHQCDPEKENLCLYGLPNETWEVNLPVEEVP 68

Query: 69  PELPEPALGINFARDGMQEKDWLSLVAVHSDVWLLSVAFYFGARFGFDKTDRKRLFNMIN 128
           PELPEPALGINFARDGMQEKDW+SLVAVHSD WL+SVAFYFGARFGF K +RKRLF MIN
Sbjct: 69  PELPEPALGINFARDGMQEKDWISLVAVHSDSWLISVAFYFGARFGFGKNERKRLFQMIN 128

Query: 129 DLPTIFEVVTGTAKKQVKDKSSVSNHSSNKSKSNPKRSSEPQIKSAK-AVQSKDEDEEGL 188
           DLPTIFEVVTG AK Q KD+S+  N S +KS     R SE   K++K +   + EDE G 
Sbjct: 129 DLPTIFEVVTGNAK-QSKDQSANHNSSRSKSSGGKPRHSESHTKASKMSPPPRKEDESGD 188

Query: 189 EEEDEEEHGETLCGACGENYASDEFWICCDICEKWFHGKCVKITPARAEHIKQYKCPSCS 248
           E+ED+E+    +CGACG+NY  DEFWICCD CEKWFHGKCVKITPA+AEHIK YKCPSC+
Sbjct: 189 EDEDDEQG--AVCGACGDNYGGDEFWICCDACEKWFHGKCVKITPAKAEHIKHYKCPSCT 248

Query: 249 NKR 251
             +
Sbjct: 249 TSK 248

[Close]

BLAST of Cp4.1LG11g03490.1 vs. NCBI nr
Match: gi|659089469|ref|XP_008445525.1| (PREDICTED: PHD finger protein ALFIN-LIKE 4 [Cucumis melo])

HSP 1 Score: 515.8 bits (1327), Expect = 4.4e-143
Identity = 249/253 (98.42%), Postives = 251/253 (99.21%), Query Frame = 1


Query: 1   MDGGAPYNPRTVEEVFRDFKGRRAGLIKALTTDVEEFYQQCDPEKENLCLYGFPSEQWEV 60
           MDGGAPYNPRTVEEVFRDFKGRRAGLIKALTTDVEEFYQQCDPEKENLCLYGFPSEQWEV
Sbjct: 1   MDGGAPYNPRTVEEVFRDFKGRRAGLIKALTTDVEEFYQQCDPEKENLCLYGFPSEQWEV 60

Query: 61  NLPAEEVPPELPEPALGINFARDGMQEKDWLSLVAVHSDVWLLSVAFYFGARFGFDKTDR 120
           NLPAEEVPPELPEPALGINFARDGMQEKDWLSLVAVHSDVWLLSVAFYFGARFGFDKTDR
Sbjct: 61  NLPAEEVPPELPEPALGINFARDGMQEKDWLSLVAVHSDVWLLSVAFYFGARFGFDKTDR 120

Query: 121 KRLFNMINDLPTIFEVVTGTAKKQVKDKSSVSNHSSNKSKSNPKRSSEPQIKSAKAVQSK 180
           KRLFNMINDLPTIFEVVTGTAKKQVKDKSSVSNHSSNKSKSN KRSSEPQIK+ KAVQSK
Sbjct: 121 KRLFNMINDLPTIFEVVTGTAKKQVKDKSSVSNHSSNKSKSNSKRSSEPQIKNTKAVQSK 180

Query: 181 DEDEEGLEEEDEEEHGETLCGACGENYASDEFWICCDICEKWFHGKCVKITPARAEHIKQ 240
           DE+EEGLEEEDEEEHGETLCGACGENYASDEFWICCDICEKWFHGKCVKITPARAEHIKQ
Sbjct: 181 DEEEEGLEEEDEEEHGETLCGACGENYASDEFWICCDICEKWFHGKCVKITPARAEHIKQ 240

Query: 241 YKCPSCSNKRIRP 254
           YKCPSCSNKRIRP
Sbjct: 241 YKCPSCSNKRIRP 253

[Close]

BLAST of Cp4.1LG11g03490.1 vs. NCBI nr
Match: gi|449452919|ref|XP_004144206.1| (PREDICTED: PHD finger protein ALFIN-LIKE 4 isoform X1 [Cucumis sativus])

HSP 1 Score: 509.6 bits (1311), Expect = 3.1e-141
Identity = 248/254 (97.64%), Postives = 251/254 (98.82%), Query Frame = 1


Query: 1   MDGGAPYNPRTVEEVFRDFKGRRAGLIKALTTDVEEFYQQCDPEKENLCLYGFPSEQWEV 60
           MDGGAPYNPRTVEEVFRDFKGRRAGLIKALTTDVEEFYQQCDPEKENLCLYGFPSEQWEV
Sbjct: 1   MDGGAPYNPRTVEEVFRDFKGRRAGLIKALTTDVEEFYQQCDPEKENLCLYGFPSEQWEV 60

Query: 61  NLPAEEVPPELPEPALGINFARDGMQEKDWLSLVAVHSDVWLLSVAFYFGARFGFDKTDR 120
           NLPAEEVPPELPEPALGINFARDGMQEKDWLSLVAVHSDVWLLSVAFYFGARFGFDKTDR
Sbjct: 61  NLPAEEVPPELPEPALGINFARDGMQEKDWLSLVAVHSDVWLLSVAFYFGARFGFDKTDR 120

Query: 121 KRLFNMINDLPTIFEVVTGTAKKQVKDKSSVSNHSSNKSKSNPKRSSEPQIKSAKAVQSK 180
           KRLFNMINDLPTIFEVVTGTAKKQVKDKSSVSNHSSNKSKSN KRSSEPQIK+ KAVQSK
Sbjct: 121 KRLFNMINDLPTIFEVVTGTAKKQVKDKSSVSNHSSNKSKSNSKRSSEPQIKTTKAVQSK 180

Query: 181 DEDEE-GLEEEDEEEHGETLCGACGENYASDEFWICCDICEKWFHGKCVKITPARAEHIK 240
           DE+EE GLEEE+EEEHGETLCGACGENYASDEFWICCDICEKWFHGKCVKITPARAEHIK
Sbjct: 181 DEEEEGGLEEEEEEEHGETLCGACGENYASDEFWICCDICEKWFHGKCVKITPARAEHIK 240

Query: 241 QYKCPSCSNKRIRP 254
           QYKCPSCSNKRIRP
Sbjct: 241 QYKCPSCSNKRIRP 254

[Close]

BLAST of Cp4.1LG11g03490.1 vs. NCBI nr
Match: gi|224142915|ref|XP_002324777.1| (PHD finger family protein [Populus trichocarpa])

HSP 1 Score: 488.0 bits (1255), Expect = 9.7e-135
Identity = 233/253 (92.09%), Postives = 244/253 (96.44%), Query Frame = 1


Query: 1   MDGGAPYNPRTVEEVFRDFKGRRAGLIKALTTDVEEFYQQCDPEKENLCLYGFPSEQWEV 60
           MDGGA YNPRTVEEVFRDFKGRRAG+IKALTTDVEEFYQQCDPEKENLCLYGFPSEQWEV
Sbjct: 1   MDGGASYNPRTVEEVFRDFKGRRAGMIKALTTDVEEFYQQCDPEKENLCLYGFPSEQWEV 60

Query: 61  NLPAEEVPPELPEPALGINFARDGMQEKDWLSLVAVHSDVWLLSVAFYFGARFGFDKTDR 120
           NLPAEEVPPELPEPALGINFARDGMQEKDWLSLVAVHSD WLLSVAFYFG+RFGFDK DR
Sbjct: 61  NLPAEEVPPELPEPALGINFARDGMQEKDWLSLVAVHSDAWLLSVAFYFGSRFGFDKADR 120

Query: 121 KRLFNMINDLPTIFEVVTGTAKKQVKDKSSVSNHSSNKSKSNPKRSSEPQIKSAKAVQSK 180
           KRLF+MINDLPTIFEVVTGTAKKQVK+KSSVSNHSSNK+KSN KR SE Q K +KA+Q+K
Sbjct: 121 KRLFSMINDLPTIFEVVTGTAKKQVKEKSSVSNHSSNKTKSNSKRGSESQGKYSKAMQAK 180

Query: 181 DEDEEGLEEEDEEEHGETLCGACGENYASDEFWICCDICEKWFHGKCVKITPARAEHIKQ 240
           DED+EGL+EEDEE+HGETLCGACGENYASDEFWICCDICEKWFHGKCVKITPARAEHIKQ
Sbjct: 181 DEDDEGLDEEDEEDHGETLCGACGENYASDEFWICCDICEKWFHGKCVKITPARAEHIKQ 240

Query: 241 YKCPSCSNKRIRP 254
           YKCPSCSNKR RP
Sbjct: 241 YKCPSCSNKRARP 253

[Close]

BLAST of Cp4.1LG11g03490.1 vs. NCBI nr
Match: gi|225429632|ref|XP_002280895.1| (PREDICTED: PHD finger protein ALFIN-LIKE 4 [Vitis vinifera])

HSP 1 Score: 488.0 bits (1255), Expect = 9.7e-135
Identity = 233/252 (92.46%), Postives = 242/252 (96.03%), Query Frame = 1


Query: 1   MDGGAPYNPRTVEEVFRDFKGRRAGLIKALTTDVEEFYQQCDPEKENLCLYGFPSEQWEV 60
           MDGG PYNPRTVEEVFRDFKGRRAG+IKALTTDVEEFYQQCDP+KENLCLYGFPSEQWEV
Sbjct: 1   MDGGPPYNPRTVEEVFRDFKGRRAGMIKALTTDVEEFYQQCDPDKENLCLYGFPSEQWEV 60

Query: 61  NLPAEEVPPELPEPALGINFARDGMQEKDWLSLVAVHSDVWLLSVAFYFGARFGFDKTDR 120
           NLPAEEVPPELPEPALGINFARDGMQEKDWLSLVAVHSD WLL+VAFYFGARFGFDK DR
Sbjct: 61  NLPAEEVPPELPEPALGINFARDGMQEKDWLSLVAVHSDAWLLAVAFYFGARFGFDKADR 120

Query: 121 KRLFNMINDLPTIFEVVTGTAKKQVKDKSSVSNHSSNKSKSNPKRSSEPQIKSAKAVQSK 180
           KRLFNMINDLPTIFEVVTGTAKKQVK+KSSVSNHSSNKSKSN KR SE Q K +K +Q+K
Sbjct: 121 KRLFNMINDLPTIFEVVTGTAKKQVKEKSSVSNHSSNKSKSNSKRGSESQGKYSKPLQAK 180

Query: 181 DEDEEGLEEEDEEEHGETLCGACGENYASDEFWICCDICEKWFHGKCVKITPARAEHIKQ 240
           DEDEEGLEEE+EEEHGETLCGACGENYASDEFWICCD+CEKWFHGKCVKITPARAEHIKQ
Sbjct: 181 DEDEEGLEEEEEEEHGETLCGACGENYASDEFWICCDVCEKWFHGKCVKITPARAEHIKQ 240

Query: 241 YKCPSCSNKRIR 253
           YKCPSCSNKR R
Sbjct: 241 YKCPSCSNKRAR 252

[Close]

BLAST of Cp4.1LG11g03490.1 vs. NCBI nr
Match: gi|224088776|ref|XP_002308535.1| (PHD finger family protein [Populus trichocarpa])

HSP 1 Score: 486.5 bits (1251), Expect = 2.8e-134
Identity = 232/253 (91.70%), Postives = 242/253 (95.65%), Query Frame = 1


Query: 1   MDGGAPYNPRTVEEVFRDFKGRRAGLIKALTTDVEEFYQQCDPEKENLCLYGFPSEQWEV 60
           MDGGA YNPRTVEEVFRDFKGRRAG+IKALTTDVEEFYQQCDPEKENLCLYGFPSEQWEV
Sbjct: 1   MDGGASYNPRTVEEVFRDFKGRRAGMIKALTTDVEEFYQQCDPEKENLCLYGFPSEQWEV 60

Query: 61  NLPAEEVPPELPEPALGINFARDGMQEKDWLSLVAVHSDVWLLSVAFYFGARFGFDKTDR 120
           NLPAEEVPPELPEPALGINFARDGMQEKDWLSLVAVHSD WLLSV+FYFG+RFGFDK DR
Sbjct: 61  NLPAEEVPPELPEPALGINFARDGMQEKDWLSLVAVHSDAWLLSVSFYFGSRFGFDKADR 120

Query: 121 KRLFNMINDLPTIFEVVTGTAKKQVKDKSSVSNHSSNKSKSNPKRSSEPQIKSAKAVQSK 180
           KRLFNMINDLPT+FEVVTGTAKKQVK+KSSVSNHSSNK+KSN KR SE Q K +K +Q+K
Sbjct: 121 KRLFNMINDLPTVFEVVTGTAKKQVKEKSSVSNHSSNKTKSNSKRGSESQGKFSKVMQAK 180

Query: 181 DEDEEGLEEEDEEEHGETLCGACGENYASDEFWICCDICEKWFHGKCVKITPARAEHIKQ 240
           DED EGL+EEDEEEHGETLCGACGENYASDEFWICCDICEKWFHGKCVKITPARAEHIKQ
Sbjct: 181 DEDGEGLDEEDEEEHGETLCGACGENYASDEFWICCDICEKWFHGKCVKITPARAEHIKQ 240

Query: 241 YKCPSCSNKRIRP 254
           YKCPSCSNKR RP
Sbjct: 241 YKCPSCSNKRARP 253

The following BLAST results are available for this feature:

BLAST of Cp4.1LG11g03490.1 vs. Swiss-Prot


Match Name	E-value	Identity	Description
ALFL4_ARATH	1.5e-119	81.10	PHD finger protein ALFIN-LIKE 4 OS=Arabidopsis thaliana GN=AL4 PE=1 SV=2	[more]
ALFL5_ARATH	1.6e-113	74.71	PHD finger protein ALFIN-LIKE 5 OS=Arabidopsis thaliana GN=AL5 PE=2 SV=1	[more]
ALFL3_ARATH	5.2e-112	77.56	PHD finger protein ALFIN-LIKE 3 OS=Arabidopsis thaliana GN=AL3 PE=1 SV=1	[more]
ALFL9_ORYSI	3.5e-108	74.90	PHD finger protein ALFIN-LIKE 9 OS=Oryza sativa subsp. indica GN=OsI_26819 PE=3 ...	[more]
ALFL9_ORYSJ	4.6e-108	74.62	PHD finger protein ALFIN-LIKE 9 OS=Oryza sativa subsp. japonica GN=Os07g0608400 ...	[more]

BLAST of Cp4.1LG11g03490.1 vs. TrEMBL


Match Name	E-value	Identity	Description
A0A0A0KDK0_CUCSA	2.2e-141	97.64	Uncharacterized protein OS=Cucumis sativus GN=Csa_6G363000 PE=4 SV=1	[more]
B9IKC9_POPTR	6.8e-135	92.09	PHD finger family protein OS=Populus trichocarpa GN=POPTR_0018s05470g PE=4 SV=1	[more]
B9HD31_POPTR	2.0e-134	91.70	PHD finger family protein OS=Populus trichocarpa GN=POPTR_0006s23990g PE=4 SV=1	[more]
A0A067KCV1_JATCU	7.5e-134	91.30	Uncharacterized protein OS=Jatropha curcas GN=JCGZ_07622 PE=4 SV=1	[more]
U5FFQ7_POPTR	1.7e-133	91.73	Uncharacterized protein OS=Populus trichocarpa GN=POPTR_0018s05470g PE=4 SV=1	[more]

BLAST of Cp4.1LG11g03490.1 vs. TAIR10


Match Name	E-value	Identity	Description
AT5G26210.1	8.5e-121	81.10	alfin-like 4	[more]
AT5G20510.1	9.1e-115	74.71	alfin-like 5	[more]
AT3G42790.1	2.9e-113	77.56	alfin-like 3	[more]
AT2G02470.1	1.5e-101	71.98	alfin-like 6	[more]
AT1G14510.1	3.4e-101	73.25	alfin-like 7	[more]

BLAST of Cp4.1LG11g03490.1 vs. NCBI nr


Match Name	E-value	Identity	Description
gi\|659089469\|ref\|XP_008445525.1\|	4.4e-143	98.42	PREDICTED: PHD finger protein ALFIN-LIKE 4 [Cucumis melo]	[more]
gi\|449452919\|ref\|XP_004144206.1\|	3.1e-141	97.64	PREDICTED: PHD finger protein ALFIN-LIKE 4 isoform X1 [Cucumis sativus]	[more]
gi\|224142915\|ref\|XP_002324777.1\|	9.7e-135	92.09	PHD finger family protein [Populus trichocarpa]	[more]
gi\|225429632\|ref\|XP_002280895.1\|	9.7e-135	92.46	PREDICTED: PHD finger protein ALFIN-LIKE 4 [Vitis vinifera]	[more]
gi\|224088776\|ref\|XP_002308535.1\|	2.8e-134	91.70	PHD finger family protein [Populus trichocarpa]	[more]

Annotated Terms

The following terms have been associated with this mRNA:

Vocabulary: **Molecular Function**
Term	Definition
GO:0042393	histone binding
GO:0008270	zinc ion binding
GO:0005515	protein binding

Vocabulary: **Biological Process**
Term	Definition
GO:0006355	regulation of transcription, DNA-templated

Vocabulary: **INTERPRO**
Term	Definition
IPR021998	Alfin
IPR019787	Znf_PHD-finger
IPR019786	Zinc_finger_PHD-type_CS
IPR013083	Znf_RING/FYVE/PHD
IPR011011	Znf_FYVE_PHD
IPR001965	Znf_PHD

GO Annotation

GO Assignments

This mRNA is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0006355	regulation of transcription, DNA-templated
cellular_component	GO:0005575	cellular_component
molecular_function	GO:0042393	histone binding
molecular_function	GO:0005515	protein binding
molecular_function	GO:0008270	zinc ion binding

Relationships

This mRNA is a part of the following gene feature(s):


Feature Name	Unique Name	Type
Cp4.1LG11g03490	Cp4.1LG11g03490	gene

The following polypeptide feature(s) derives from this mRNA:


Feature Name	Unique Name	Type
Cp4.1LG11g03490.1	Cp4.1LG11g03490.1-protein	polypeptide

The following five_prime_UTR feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
Cp4.1LG11g03490.1:five_prime_utr:001	Cp4.1LG11g03490.1:five_prime_utr:001	five_prime_UTR

The following CDS feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
Cp4.1LG11g03490.1:cds:001	Cp4.1LG11g03490.1:cds:001	CDS
Cp4.1LG11g03490.1:cds:002	Cp4.1LG11g03490.1:cds:002	CDS
Cp4.1LG11g03490.1:cds:003	Cp4.1LG11g03490.1:cds:003	CDS
Cp4.1LG11g03490.1:cds:004	Cp4.1LG11g03490.1:cds:004	CDS
Cp4.1LG11g03490.1:cds:005	Cp4.1LG11g03490.1:cds:005	CDS

The following three_prime_UTR feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
Cp4.1LG11g03490.1:three_prime_utr:001	Cp4.1LG11g03490.1:three_prime_utr:001	three_prime_UTR

InterPro

Analysis Name: InterPro Annotations of Cucurbita pepo
Date Performed: 2017-12-02


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR001965	Zinc finger, PHD-type	SMART	SM00249	PHD_3	coord: 199..247 score: 2.
IPR011011	Zinc finger, FYVE/PHD-type	unknown	SSF57903	FYVE/PHD zinc finger	coord: 189..250 score: 2.21
IPR013083	Zinc finger, RING/FYVE/PHD-type	GENE3D	G3DSA:3.30.40.10		coord: 192..249 score: 3.4
IPR019786	Zinc finger, PHD-type, conserved site	PROSITE	PS01359	ZF_PHD_1	coord: 200..246 scor
IPR019787	Zinc finger, PHD-finger	PFAM	PF00628	PHD	coord: 200..248 score: 1.4
IPR019787	Zinc finger, PHD-finger	PROFILE	PS50016	ZF_PHD_2	coord: 197..249 score: 9
IPR021998	Alfin	PFAM	PF12165	DUF3594	coord: 11..138 score: 2.6
None	No IPR available	PANTHER	PTHR12321	CPG BINDING PROTEIN	coord: 1..253 score: 1.3E
None	No IPR available	PANTHER	PTHR12321:SF61	PHD FINGER PROTEIN ALFIN-LIKE 5	coord: 1..253 score: 1.3E