Cp4.1LG11g03490 (gene) Cucurbita pepo (Zucchini) | Cucurbit Genomics Database (CuGenDB)

Overview


Name	Cp4.1LG11g03490
Type	gene
Organism	Cucurbita pepo (Cucurbita pepo (Zucchini))
Description	PHD finger alfin-like protein
Location	Cp4.1LG11 : 1957860 .. 1962761 (+)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

CGGCCCAAAATCCTCCGTTCCGGACTTTCCCTCTTTTTATCCATTTCATTTAATTTTACCTTTCTCCTCCGGTTCAAGTCCGCGTTCATTTCTCTTTCTCTCTCTTCTTCCACTGTGTGTCGTCGCTCAGAGGTCAAATATTTGGCTGTTTTTTCCCTCCTTTTGCTTTCCCTTCTCTCTTCTTCCTCGCCATGCCTCTCGATCTGTAATTCATTTTCTTCTTTTCTCTTTCTCAATTCTTATCCTTATCTACACACTTCTCTGCTCTCTTTATCGCACTTCTGGAGCTTCAAGTTCTAGTTTCTCAAGGTAAGAGTTGGTAGGCTATGGACGGGGGTGCTCCGTACAATCCACGTACCGTGGAAGAGGTGTTTAGGGATTTCAAGGGCCGTAGAGCTGGTTTGATTAAGGCTCTAACTACTGGTGAACTTTTATTTCATTCTCCCTGTTAAATTGTTTTCACCTGTTGTCCTTTTGGTTTTCTCTGCTTCATTCTGCTTCGTGTTGTAATAATTTTTGTTTTTCCGTTAATTTCGTCAGATTTTTACTATTTCTGCTTTTTTGGTTGCAGATGTTGAAGAGTTCTACCAGCAATGTGATCCTGGTTTGATTTTTCGCTGCTTTTTTACGTTTTTGAATATTAGTATGCATTGTCGGAGAGGATGCTAGAAGTAATGCGTAGGAAAAGTGGTGTCTACTAGGAACTAAATTTCGATGACTGCAAATATAAATAGCTAATAAAATTTATCGATATTGATGTCTGGTTTAGTTGAGAGGTTTCCGCGGCTTATTTTCCTAAGCCAGTTTGTCATTAATTTCCGTGTTTCTTTTGTCCTTTTATTTCACCGCCTTGTCTGTAAGCAGTGCATGTGTGTGAAGCCTTCATACTTTATAACGTAAAACAGAGCACATGTTTTATATGGTAATGCAAGGATTTAATTATCTGGCCTTACAGGATGAAATCTGTAGTAAGCTGATAAGTAATGAGGTTTAATGGTAATCTTGTCGTATAATTTTAAAATGTGTAGGCTTATACTGTTCAGATATTCTAATTTCGGCGTGTAAAAAATCGTTTGATACATAATCTATAACAGTTAAAAAAGAACTAAACATACTACTTTTAACACTTTTTTTTTTTCTTGAATTATAACCCAAATAAGGGATTGTTTGGTACATCGAATCATAACCCAATTTTTCTTAAACTTCACATTTGCCAGAGAAAGAAAATCTCTGCCTTTACGGATTTCCTAGTGAGCAGTGGGAAGTCAATTTACCTGCGGAAGAGGTGCCTCCAGAGCTTCCAGAACCTGCACTGGGTATAAACTTTGCTAGAGACGGGATGCAAGAAAAGGATTGGCTATCCTTGGTTGCAGTGCATAGTGATGTTTGGCTGCTTTCTGTGGCATTTTATTTTGGAGCTAGGTTTGGATTTGATAAGACAGATAGGTATGTGTTCACCTGATCTGCCTTCGTTATTTTATGTTAATGATTCATGCATAGTATATTTTAAACTGGTCGTAGGTTGTAGCGAAGGGCTGGGCATGAGCTTCAATTGTTTCTCTCTCTCTCTCTCTCTCTGTCTTTTATTGTCTTTGAGCAGTTCTTAATTTAATATTTTGTTCAACTTTTGTTCATTTCACGTGCTCTTGGGAAACTGTTTTTCTCTGCCCTTGAATTTCTTATTTCTTTTCATGATGATGATAGGTTTTGCAACCCCATACATGCTTTTCATGATCTAAAGTTCTATAATGGGATTTTTTTTTGTGGGGTGTTATATTTTGGTTATTGTTTTAGATTGAATTGGTATTAGCCAATCTCTTTCTTATAAGGTTTTATTTCAAACTATAATTTTTTTTTTCATATTATATGTTTTATACAAGGAAACACAAACGCATTTGTGATTGCTCAATATGTGTTTCACACTTGTTGAATATATTGGACACGCGTTGGTTACTTGTCTAACACATGACACACATGTACGCTTGTTGAACACATTGGATGGACATATTTGAGACAATTATTGAGCACTTCGTTTCAAGTGTTAAGCTATTTATTTGTTATTCTGTTAGAAATGCTATTAGGATAGGAAATAAGTAATTAGATAGGGAGGTGGTTATGGAGTTTGGTTATAAATAGAGGGAATGAGGCATTACGTTGTGGCGAGTGAATTAGGGCTTGGGAGAGATCTCAAGAGGGAGGGTGTAACAATCTTGAATTACTTATATTGTAATTTCTTTAGATATTGCAATATAATTATCTTTGGGTGTTTTCATACAATTTCAGTGTTTGGATGCCTAACATATTATTTGAAGATTAATCAACCATAAAAACAAATATGGGAGAATACTTACAAATTTTGATCGCAATGAGTTCTTTAAAGTATTTAAGCATTTAATGATGGCCGATTTTTGTTTCTCTTTTCTATAACTGTCGAGTCATTCAGTAACATGTTTAGTTGGTTCTTGATTCTTTTACTATTAGAAATTGCATCATTAAATACATATGCGATATCTATAATAAATTAACGTTCTACATTGTACATTTCATGACAATTTTTAAATAAAAAATTCATCATTTCTTCTATATTATATTCTAAATGAAAAGACCATACAATGTATTTTTTTTATATATAAAAACATTAAAATATAGGATATGTTCAAATATGTTTTAAGTTAAATTACAAGTTTAGTCTTTTAACGGATTGTGTCTAATAAGTCCTTGAACATTAAAGTGTTTGATAAGTCCTTGAACTTTCAATTTTGTGTCTAACAAGTTCTTGAGTGTCTAAAAGGTTTTTAAACTTTCAAGTTTGTGTTGGTAGGTTCTTGACCTATTTGAAACACCTAAAAATTTATGAGTATATTAGTAATAAATTAGACACAAAATTAGAAGTTCAAGGATGATAATTTGAAAGTTTCAGAAATCTATTACTCTTTTTTAAAATTCAGAGGCTTATTGACACAAACATAATAGTTTAGGCACTAAACTTGTTATTTAACCTACATTCTGAAAATTTTAAATTTTATTAAGCATGCTCCTGCATGCTCGTGTCCTCACTTTACAGAAAATGATTGCACAGTGTCTATGGCATGGCGTGGTGTCATAGGCTTTATCTTCCTCCTATACATGCCTGGTTTTCCAAAGGAGCTGTTCTCTTGACCGTTTTTGGGATTTGCAACATTCTTTGCAAGATGGATACGGTTGTATTCTTTCATTTTTTCAATGTAAGCTTGGTTTTAATCAACTGTGGTTTGGCCATAGTCATTGGTGTCAGTGAAAAATAATCAGGGTTGAGGAAATGAGTTCAAATCATAAGGCCACCTACCTTGGATTTAAAGTTCTATCAGTATTTACACGGCACATTTCATCATTGTGGTTGCTTCATTACAACAGGGTCCATTACTTAGTCTTTCTAGTAGTTTGGGTCTATTTTGGGCTGTCATTTTGTTGGTCTGGGTTGCTGGTCTTCTCTCGACTTTCTTGTATTCTTTTATTTTTATCTTAGTCATAATTTGGTTCCTGATGAAGTTTCCATGACTGGGGATTCAAGTTTCTATTGCTTTTGTTGCAGGAAGCGTCTATTTAATATGATAAATGATCTTCCAACAATATTTGAAGTGGTGACAGGGACAGCCAAAAAACAAGTTAAGGATAAATCATCAGTTTCAAATCATAGCAGTAATAAATCTAAATCAAATCCAAAGGTTTGAAAGAATTTTTTTATCCTGCTTTCTCCTGTTTTTAGTTTTTCCTAGCCAATTCGGCTTAAAATGAGACACAAAACTGCTGATGATTTTTAATTGCTCTAATGGTTTGGCTGAGGTGCCTGTAGAAAACCAGTCGACCTGCATACCATACTAGAGTATTCTTTGATTACTGGTTCTCTTTGCTTAGTATGTGTTTCAATCCGTGTGGGAGGCAACTTACTAAGCATATTATTTGGCATATATTTGCAATATACAGCGGAGTTCCGAACCTCAAATAAAAAGTGCGAAAGCGGTTCAATCGAAGGACGAGGATGAGGAAGGCTTGGAAGAGGAAGACGAAGAAGAACATGGAGAAACACTTTGTGGAGCTTGCGGAGAGAATTATGCATCTGATGAGTTCTGGATTTGCTGTGACATATGTGAGAAATGGTTCCATGGGAAGTGTGTCAAGATCACTCCGGCAAGGGCAGAGCACATTAAGCAGTATAAATGTCCATCTTGCAGCAACAAGCGAATCCGACCCTGATGTGTTTACACGGCACGCATGGTAGGTATTTGCAACAACCTCCCCTCCCTCCCCAAACCAAAGGAAAAAAAGGGGAAAAAAAAAGAGAGGAAAATGAACCAAGAGATAGTCAAATGTTGCTTCCCTTAGGATCTCAGTGTAGACCACTAATTGTGTATTAGGATTAGTTTAAACTTTAAATTAGGACTGTGGTTAGGTTGGAAATTTACATTCTATGTTATTTGTGGACAAACTCCTTTCTGTTTGTGTATTGTATGAACTACTTGTATTTTGTATGTGGTATAATATGTTACTGTCAAAAGTTTATACTTGTCAGGATGCCCATCTCCATTGTACGTGCCGTTGGGGTCACGAGAGAGTTTTCGTTCGCTTCGTGGGTTCACTATGTGTTAAGGTTAGTCACTCTCTCATTTATCATCTCAATACCTATCTCTATTAGGACGCTTGGAATTAAGAATTAGGCTGAACATATCCTACTCAAGTCTTTGTAGACTAGTTTGCTGCTTACAATTAACCATTTACATCACTTACCACTAGGCAACATTTTAGATACCCAAACGTGAGGATTTGTTTGGAGTTTTCTTTAAACAATTCTCTCGCAGATATCTTGTAATTGATGGCTTCTGTTCTAACTTGAAATCATTATAATTGACTAGAAAGAACTTTAGG

mRNA sequence

CGGCCCAAAATCCTCCGTTCCGGACTTTCCCTCTTTTTATCCATTTCATTTAATTTTACCTTTCTCCTCCGGTTCAAGTCCGCGTTCATTTCTCTTTCTCTCTCTTCTTCCACTGTGTGTCGTCGCTCAGAGGTCAAATATTTGGCTGTTTTTTCCCTCCTTTTGCTTTCCCTTCTCTCTTCTTCCTCGCCATGCCTCTCGATCTGTAATTCATTTTCTTCTTTTCTCTTTCTCAATTCTTATCCTTATCTACACACTTCTCTGCTCTCTTTATCGCACTTCTGGAGCTTCAAGTTCTAGTTTCTCAAGGTAAGAGTTGGTAGGCTATGGACGGGGGTGCTCCGTACAATCCACGTACCGTGGAAGAGGTGTTTAGGGATTTCAAGGGCCGTAGAGCTGGTTTGATTAAGGCTCTAACTACTGATGTTGAAGAGTTCTACCAGCAATGTGATCCTGAGAAAGAAAATCTCTGCCTTTACGGATTTCCTAGTGAGCAGTGGGAAGTCAATTTACCTGCGGAAGAGGTGCCTCCAGAGCTTCCAGAACCTGCACTGGGTATAAACTTTGCTAGAGACGGGATGCAAGAAAAGGATTGGCTATCCTTGGTTGCAGTGCATAGTGATGTTTGGCTGCTTTCTGTGGCATTTTATTTTGGAGCTAGGTTTGGATTTGATAAGACAGATAGGAAGCGTCTATTTAATATGATAAATGATCTTCCAACAATATTTGAAGTGGTGACAGGGACAGCCAAAAAACAAGTTAAGGATAAATCATCAGTTTCAAATCATAGCAGTAATAAATCTAAATCAAATCCAAAGCGGAGTTCCGAACCTCAAATAAAAAGTGCGAAAGCGGTTCAATCGAAGGACGAGGATGAGGAAGGCTTGGAAGAGGAAGACGAAGAAGAACATGGAGAAACACTTTGTGGAGCTTGCGGAGAGAATTATGCATCTGATGAGTTCTGGATTTGCTGTGACATATGTGAGAAATGGTTCCATGGGAAGTGTGTCAAGATCACTCCGGCAAGGGCAGAGCACATTAAGCAGTATAAATGTCCATCTTGCAGCAACAAGCGAATCCGACCCTGATGTGTTTACACGGCACGCATGGTAGGTATTTGCAACAACCTCCCCTCCCTCCCCAAACCAAAGGAAAAAAAGGGGAAAAAAAAAGAGAGGAAAATGAACCAAGAGATAGTCAAATGTTGCTTCCCTTAGGATCTCAGTGTAGACCACTAATTGTGTATTAGGATTAGTTTAAACTTTAAATTAGGACTGTGGTTAGGTTGGAAATTTACATTCTATGTTATTTGTGGACAAACTCCTTTCTGTTTGTGTATTGTATGAACTACTTGTATTTTGTATGTGGTATAATATGTTACTGTCAAAAGTTTATACTTGTCAGGATGCCCATCTCCATTGTACGTGCCGTTGGGGTCACGAGAGAGTTTTCGTTCGCTTCGTGGGTTCACTATGTGTTAAGGTTAGTCACTCTCTCATTTATCATCTCAATACCTATCTCTATTAGGACGCTTGGAATTAAGAATTAGGCTGAACATATCCTACTCAAGTCTTTGTAGACTAGTTTGCTGCTTACAATTAACCATTTACATCACTTACCACTAGGCAACATTTTAGATACCCAAACGTGAGGATTTGTTTGGAGTTTTCTTTAAACAATTCTCTCGCAGATATCTTGTAATTGATGGCTTCTGTTCTAACTTGAAATCATTATAATTGACTAGAAAGAACTTTAGG

Coding sequence (CDS)

ATGGACGGGGGTGCTCCGTACAATCCACGTACCGTGGAAGAGGTGTTTAGGGATTTCAAGGGCCGTAGAGCTGGTTTGATTAAGGCTCTAACTACTGATGTTGAAGAGTTCTACCAGCAATGTGATCCTGAGAAAGAAAATCTCTGCCTTTACGGATTTCCTAGTGAGCAGTGGGAAGTCAATTTACCTGCGGAAGAGGTGCCTCCAGAGCTTCCAGAACCTGCACTGGGTATAAACTTTGCTAGAGACGGGATGCAAGAAAAGGATTGGCTATCCTTGGTTGCAGTGCATAGTGATGTTTGGCTGCTTTCTGTGGCATTTTATTTTGGAGCTAGGTTTGGATTTGATAAGACAGATAGGAAGCGTCTATTTAATATGATAAATGATCTTCCAACAATATTTGAAGTGGTGACAGGGACAGCCAAAAAACAAGTTAAGGATAAATCATCAGTTTCAAATCATAGCAGTAATAAATCTAAATCAAATCCAAAGCGGAGTTCCGAACCTCAAATAAAAAGTGCGAAAGCGGTTCAATCGAAGGACGAGGATGAGGAAGGCTTGGAAGAGGAAGACGAAGAAGAACATGGAGAAACACTTTGTGGAGCTTGCGGAGAGAATTATGCATCTGATGAGTTCTGGATTTGCTGTGACATATGTGAGAAATGGTTCCATGGGAAGTGTGTCAAGATCACTCCGGCAAGGGCAGAGCACATTAAGCAGTATAAATGTCCATCTTGCAGCAACAAGCGAATCCGACCCTGA

Protein sequence

MDGGAPYNPRTVEEVFRDFKGRRAGLIKALTTDVEEFYQQCDPEKENLCLYGFPSEQWEVNLPAEEVPPELPEPALGINFARDGMQEKDWLSLVAVHSDVWLLSVAFYFGARFGFDKTDRKRLFNMINDLPTIFEVVTGTAKKQVKDKSSVSNHSSNKSKSNPKRSSEPQIKSAKAVQSKDEDEEGLEEEDEEEHGETLCGACGENYASDEFWICCDICEKWFHGKCVKITPARAEHIKQYKCPSCSNKRIRP

Homology

[Close]

BLAST of Cp4.1LG11g03490 vs. Swiss-Prot
Match: ALFL4_ARATH (PHD finger protein ALFIN-LIKE 4 OS=Arabidopsis thaliana GN=AL4 PE=1 SV=2)

HSP 1 Score: 430.3 bits (1105), Expect = 1.5e-119
Identity = 206/254 (81.10%), Postives = 226/254 (88.98%), Query Frame = 1


Query: 1   MDGGAPYNPRTVEEVFRDFKGRRAGLIKALTTDVEEFYQQCDPEKENLCLYGFPSEQWEV 60
           M+ G  YNPRTVEEVFRDFKGRRAG+IKALTTDV+EF++ CDPEKENLCLYG P+E WEV
Sbjct: 1   MEAGGAYNPRTVEEVFRDFKGRRAGMIKALTTDVQEFFRLCDPEKENLCLYGHPNEHWEV 60

Query: 61  NLPAEEVPPELPEPALGINFARDGMQEKDWLSLVAVHSDVWLLSVAFYFGARFGFDKTDR 120
           NLPAEEVPPELPEP LGINFARDGM EKDWLSLVAVHSD WLL+VAF+FGARFGFDK DR
Sbjct: 61  NLPAEEVPPELPEPVLGINFARDGMAEKDWLSLVAVHSDAWLLAVAFFFGARFGFDKADR 120

Query: 121 KRLFNMINDLPTIFEVVTGTAKKQVKDKSSVSNHSSNKSKSNPKRSSEPQIKSAKAVQSK 180
           KRLFNM+NDLPTIFEVV GTAKKQ KDKSSVSN+SSN+SKS+ KR SE + K +K     
Sbjct: 121 KRLFNMVNDLPTIFEVVAGTAKKQGKDKSSVSNNSSNRSKSSSKRGSESRAKFSKPEPKD 180

Query: 181 D--EDEEGLEEEDEEEHGETLCGACGENYASDEFWICCDICEKWFHGKCVKITPARAEHI 240
           D  E+EEG+EEEDE+E GET CGACGE+YA+DEFWICCD+CE WFHGKCVKITPARAEHI
Sbjct: 181 DEEEEEEGVEEEDEDEQGETQCGACGESYAADEFWICCDLCEMWFHGKCVKITPARAEHI 240

Query: 241 KQYKCPSCSNKRIR 253
           KQYKCPSCSNKR R
Sbjct: 241 KQYKCPSCSNKRAR 254

[Close]

BLAST of Cp4.1LG11g03490 vs. Swiss-Prot
Match: ALFL5_ARATH (PHD finger protein ALFIN-LIKE 5 OS=Arabidopsis thaliana GN=AL5 PE=2 SV=1)

HSP 1 Score: 410.2 bits (1053), Expect = 1.6e-113
Identity = 195/261 (74.71%), Postives = 229/261 (87.74%), Query Frame = 1


Query: 1   MDGG-APYNPRTVEEVFRDFKGRRAGLIKALTTDVEEFYQQCDPEKENLCLYGFPSEQWE 60
           M+GG A Y+PRTVEEVFRDFKGRRAG+I+ALTTDVE+F+QQCDPEK+NLCLYGFP+E WE
Sbjct: 1   MEGGTAHYSPRTVEEVFRDFKGRRAGIIQALTTDVEDFFQQCDPEKQNLCLYGFPNEVWE 60

Query: 61  VNLPAEEVPPELPEPALGINFARDGMQEKDWLSLVAVHSDVWLLSVAFYFGARFGFDKTD 120
           VNLPAEEVPPELPEPALGINFARDGMQE++WLSLVAVHSD WLLSV+FYFG+RFGFD+ D
Sbjct: 61  VNLPAEEVPPELPEPALGINFARDGMQERNWLSLVAVHSDAWLLSVSFYFGSRFGFDRAD 120

Query: 121 RKRLFNMINDLPTIFEVVTGTAKKQVKDKSSVSNHSSNKSKSNPKRSSEPQIKSAKAVQS 180
           RKRLF+MIN++PT++EVVTG A+KQ K+  S +N + N+SKSN K     + KS+K + +
Sbjct: 121 RKRLFSMINEVPTVYEVVTGNAEKQTKEMPSSANQNGNRSKSNSKMRG-LESKSSKTIHA 180

Query: 181 KDEDE-------EGLEEEDEEEHGETLCGACGENYASDEFWICCDICEKWFHGKCVKITP 240
           KDE+E       E  E+EDE+EHGETLCGACG+NYASDEFWICCD+CEKWFHG+CVKITP
Sbjct: 181 KDEEEGLELEEGEEEEDEDEDEHGETLCGACGDNYASDEFWICCDMCEKWFHGECVKITP 240

Query: 241 ARAEHIKQYKCPSCSNKRIRP 254
           ARAEHIK YKCP+CSNKR RP
Sbjct: 241 ARAEHIKHYKCPTCSNKRARP 260

[Close]

BLAST of Cp4.1LG11g03490 vs. Swiss-Prot
Match: ALFL3_ARATH (PHD finger protein ALFIN-LIKE 3 OS=Arabidopsis thaliana GN=AL3 PE=1 SV=1)

HSP 1 Score: 405.2 bits (1040), Expect = 5.2e-112
Identity = 197/254 (77.56%), Postives = 225/254 (88.58%), Query Frame = 1


Query: 1   MDGGAP-YNPRTVEEVFRDFKGRRAGLIKALTTDVEEFYQQCDPEKENLCLYGFPSEQWE 60
           M+GGA  YNPRTVEEVF+DFKGRR  ++KALTTDV+EFYQQCDPEKENLCLYG P+E+WE
Sbjct: 1   MEGGAALYNPRTVEEVFKDFKGRRTAIVKALTTDVQEFYQQCDPEKENLCLYGLPNEEWE 60

Query: 61  VNLPAEEVPPELPEPALGINFARDGMQEKDWLSLVAVHSDVWLLSVAFYFGARFGFDKTD 120
           VNLPAEEVPPELPEPALGINFARDG+ EK+WLSLVA+HSD WLLSV+FYFG+RF F K +
Sbjct: 61  VNLPAEEVPPELPEPALGINFARDGLSEKEWLSLVAIHSDAWLLSVSFYFGSRFSFHKEE 120

Query: 121 RKRLFNMINDLPTIFEVVTGTAKKQVKDKSSVSNHSSNKSKSNPK-RSSEPQIKSAKAVQ 180
           RKRLFNMIND+PTIFEVVTG AK   KDKSS +N + NKSKSN K R+SE   KS+K  Q
Sbjct: 121 RKRLFNMINDVPTIFEVVTGMAK--AKDKSSAANQNGNKSKSNSKVRTSEG--KSSKTKQ 180

Query: 181 SKDEDEEGLEEEDEEEHGETLCGACGENYASDEFWICCDICEKWFHGKCVKITPARAEHI 240
            K+EDEE ++E+DE++HGETLCGACG++  +DEFWICCD+CEKWFHGKCVKITPARAEHI
Sbjct: 181 PKEEDEE-IDEDDEDDHGETLCGACGDSDGADEFWICCDLCEKWFHGKCVKITPARAEHI 240

Query: 241 KQYKCPSCSNKRIR 253
           KQYKCPSCSNKR R
Sbjct: 241 KQYKCPSCSNKRAR 249

[Close]

BLAST of Cp4.1LG11g03490 vs. Swiss-Prot
Match: ALFL9_ORYSI (PHD finger protein ALFIN-LIKE 9 OS=Oryza sativa subsp. indica GN=OsI_26819 PE=3 SV=1)

HSP 1 Score: 392.5 bits (1007), Expect = 3.5e-108
Identity = 194/259 (74.90%), Postives = 212/259 (81.85%), Query Frame = 1


Query: 5   APYNPRTVEEVFRDFKGRRAGLIKALTTDVEEFYQQCDPEKENLCLYGFPSEQWEVNLPA 64
           A YNPRTVEEVFRDFKGRRAGL++ALT DVE+F++QCDPEKENLCLYGFP+E WEVNLPA
Sbjct: 3   AQYNPRTVEEVFRDFKGRRAGLVRALTADVEDFFRQCDPEKENLCLYGFPNEHWEVNLPA 62

Query: 65  EEVPPELPEPALGINFARDGMQEKDWLSLVAVHSDVWLLSVAFYFGARFGFDKTDRKRLF 124
           EEVPPELPEPALGINFARDGMQEKDWLS+VAVHSD WLLSVAFYFGARFGFDK DRKRLF
Sbjct: 63  EEVPPELPEPALGINFARDGMQEKDWLSMVAVHSDAWLLSVAFYFGARFGFDKNDRKRLF 122

Query: 125 NMINDLPTIFEVVTGTAKKQVKDKSSVSNHSSNKSK-SNPKRSSEPQIKSAKAVQSKDED 184
            MINDLPTIFEVV+G +K +     S +NHS++KSK SN  +SSEP+ K  K        
Sbjct: 123 GMINDLPTIFEVVSGKSKAK---PPSANNHSNSKSKSSNKTKSSEPRAKQPKPQPQPPVK 182

Query: 185 EEGLEEED---------------EEEHGETLCGACGENYASDEFWICCDICEKWFHGKCV 244
            EG EEE                EEEHGETLCGACGE+Y +DEFWICCDICEKWFHGKCV
Sbjct: 183 NEGREEEGGPDDEEGGGGGGGGREEEHGETLCGACGESYGADEFWICCDICEKWFHGKCV 242

Query: 245 KITPARAEHIKQYKCPSCS 248
           KITPA+AEHIKQYKCPSCS
Sbjct: 243 KITPAKAEHIKQYKCPSCS 258

[Close]

BLAST of Cp4.1LG11g03490 vs. Swiss-Prot
Match: ALFL9_ORYSJ (PHD finger protein ALFIN-LIKE 9 OS=Oryza sativa subsp. japonica GN=Os07g0608400 PE=2 SV=1)

HSP 1 Score: 392.1 bits (1006), Expect = 4.6e-108
Identity = 194/260 (74.62%), Postives = 212/260 (81.54%), Query Frame = 1


Query: 5   APYNPRTVEEVFRDFKGRRAGLIKALTTDVEEFYQQCDPEKENLCLYGFPSEQWEVNLPA 64
           A YNPRTVEEVFRDFKGRRAGL++ALT DVE+F++QCDPEKENLCLYGFP+E WEVNLPA
Sbjct: 3   AQYNPRTVEEVFRDFKGRRAGLVRALTADVEDFFRQCDPEKENLCLYGFPNEHWEVNLPA 62

Query: 65  EEVPPELPEPALGINFARDGMQEKDWLSLVAVHSDVWLLSVAFYFGARFGFDKTDRKRLF 124
           EEVPPELPEPALGINFARDGMQEKDWLS+VAVHSD WLLSVAFYFGARFGFDK DRKRLF
Sbjct: 63  EEVPPELPEPALGINFARDGMQEKDWLSMVAVHSDAWLLSVAFYFGARFGFDKNDRKRLF 122

Query: 125 NMINDLPTIFEVVTGTAKKQVKDKSSVSNHSSNKSK-SNPKRSSEPQIKSAKAVQSKDED 184
            MINDLPTIFEVV+G +K +     S +NHS++KSK SN  +SSEP+ K  K        
Sbjct: 123 GMINDLPTIFEVVSGKSKAK---PPSANNHSNSKSKSSNKTKSSEPRAKQPKPQPQPPVK 182

Query: 185 EEGLEEED----------------EEEHGETLCGACGENYASDEFWICCDICEKWFHGKC 244
            EG EEE                 EEEHGETLCGACGE+Y +DEFWICCDICEKWFHGKC
Sbjct: 183 NEGREEEGGPDDEEGGGGGGGGGREEEHGETLCGACGESYGADEFWICCDICEKWFHGKC 242

Query: 245 VKITPARAEHIKQYKCPSCS 248
           VKITPA+AEHIKQYKCPSCS
Sbjct: 243 VKITPAKAEHIKQYKCPSCS 259

[Close]

BLAST of Cp4.1LG11g03490 vs. TrEMBL
Match: A0A0A0KDK0_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_6G363000 PE=4 SV=1)

HSP 1 Score: 509.6 bits (1311), Expect = 2.2e-141
Identity = 248/254 (97.64%), Postives = 251/254 (98.82%), Query Frame = 1


Query: 1   MDGGAPYNPRTVEEVFRDFKGRRAGLIKALTTDVEEFYQQCDPEKENLCLYGFPSEQWEV 60
           MDGGAPYNPRTVEEVFRDFKGRRAGLIKALTTDVEEFYQQCDPEKENLCLYGFPSEQWEV
Sbjct: 1   MDGGAPYNPRTVEEVFRDFKGRRAGLIKALTTDVEEFYQQCDPEKENLCLYGFPSEQWEV 60

Query: 61  NLPAEEVPPELPEPALGINFARDGMQEKDWLSLVAVHSDVWLLSVAFYFGARFGFDKTDR 120
           NLPAEEVPPELPEPALGINFARDGMQEKDWLSLVAVHSDVWLLSVAFYFGARFGFDKTDR
Sbjct: 61  NLPAEEVPPELPEPALGINFARDGMQEKDWLSLVAVHSDVWLLSVAFYFGARFGFDKTDR 120

Query: 121 KRLFNMINDLPTIFEVVTGTAKKQVKDKSSVSNHSSNKSKSNPKRSSEPQIKSAKAVQSK 180
           KRLFNMINDLPTIFEVVTGTAKKQVKDKSSVSNHSSNKSKSN KRSSEPQIK+ KAVQSK
Sbjct: 121 KRLFNMINDLPTIFEVVTGTAKKQVKDKSSVSNHSSNKSKSNSKRSSEPQIKTTKAVQSK 180

Query: 181 DEDEE-GLEEEDEEEHGETLCGACGENYASDEFWICCDICEKWFHGKCVKITPARAEHIK 240
           DE+EE GLEEE+EEEHGETLCGACGENYASDEFWICCDICEKWFHGKCVKITPARAEHIK
Sbjct: 181 DEEEEGGLEEEEEEEHGETLCGACGENYASDEFWICCDICEKWFHGKCVKITPARAEHIK 240

Query: 241 QYKCPSCSNKRIRP 254
           QYKCPSCSNKRIRP
Sbjct: 241 QYKCPSCSNKRIRP 254

[Close]

BLAST of Cp4.1LG11g03490 vs. TrEMBL
Match: B9IKC9_POPTR (PHD finger family protein OS=Populus trichocarpa GN=POPTR_0018s05470g PE=4 SV=1)

HSP 1 Score: 488.0 bits (1255), Expect = 6.8e-135
Identity = 233/253 (92.09%), Postives = 244/253 (96.44%), Query Frame = 1


Query: 1   MDGGAPYNPRTVEEVFRDFKGRRAGLIKALTTDVEEFYQQCDPEKENLCLYGFPSEQWEV 60
           MDGGA YNPRTVEEVFRDFKGRRAG+IKALTTDVEEFYQQCDPEKENLCLYGFPSEQWEV
Sbjct: 1   MDGGASYNPRTVEEVFRDFKGRRAGMIKALTTDVEEFYQQCDPEKENLCLYGFPSEQWEV 60

Query: 61  NLPAEEVPPELPEPALGINFARDGMQEKDWLSLVAVHSDVWLLSVAFYFGARFGFDKTDR 120
           NLPAEEVPPELPEPALGINFARDGMQEKDWLSLVAVHSD WLLSVAFYFG+RFGFDK DR
Sbjct: 61  NLPAEEVPPELPEPALGINFARDGMQEKDWLSLVAVHSDAWLLSVAFYFGSRFGFDKADR 120

Query: 121 KRLFNMINDLPTIFEVVTGTAKKQVKDKSSVSNHSSNKSKSNPKRSSEPQIKSAKAVQSK 180
           KRLF+MINDLPTIFEVVTGTAKKQVK+KSSVSNHSSNK+KSN KR SE Q K +KA+Q+K
Sbjct: 121 KRLFSMINDLPTIFEVVTGTAKKQVKEKSSVSNHSSNKTKSNSKRGSESQGKYSKAMQAK 180

Query: 181 DEDEEGLEEEDEEEHGETLCGACGENYASDEFWICCDICEKWFHGKCVKITPARAEHIKQ 240
           DED+EGL+EEDEE+HGETLCGACGENYASDEFWICCDICEKWFHGKCVKITPARAEHIKQ
Sbjct: 181 DEDDEGLDEEDEEDHGETLCGACGENYASDEFWICCDICEKWFHGKCVKITPARAEHIKQ 240

Query: 241 YKCPSCSNKRIRP 254
           YKCPSCSNKR RP
Sbjct: 241 YKCPSCSNKRARP 253

[Close]

BLAST of Cp4.1LG11g03490 vs. TrEMBL
Match: B9HD31_POPTR (PHD finger family protein OS=Populus trichocarpa GN=POPTR_0006s23990g PE=4 SV=1)

HSP 1 Score: 486.5 bits (1251), Expect = 2.0e-134
Identity = 232/253 (91.70%), Postives = 242/253 (95.65%), Query Frame = 1


Query: 1   MDGGAPYNPRTVEEVFRDFKGRRAGLIKALTTDVEEFYQQCDPEKENLCLYGFPSEQWEV 60
           MDGGA YNPRTVEEVFRDFKGRRAG+IKALTTDVEEFYQQCDPEKENLCLYGFPSEQWEV
Sbjct: 1   MDGGASYNPRTVEEVFRDFKGRRAGMIKALTTDVEEFYQQCDPEKENLCLYGFPSEQWEV 60

Query: 61  NLPAEEVPPELPEPALGINFARDGMQEKDWLSLVAVHSDVWLLSVAFYFGARFGFDKTDR 120
           NLPAEEVPPELPEPALGINFARDGMQEKDWLSLVAVHSD WLLSV+FYFG+RFGFDK DR
Sbjct: 61  NLPAEEVPPELPEPALGINFARDGMQEKDWLSLVAVHSDAWLLSVSFYFGSRFGFDKADR 120

Query: 121 KRLFNMINDLPTIFEVVTGTAKKQVKDKSSVSNHSSNKSKSNPKRSSEPQIKSAKAVQSK 180
           KRLFNMINDLPT+FEVVTGTAKKQVK+KSSVSNHSSNK+KSN KR SE Q K +K +Q+K
Sbjct: 121 KRLFNMINDLPTVFEVVTGTAKKQVKEKSSVSNHSSNKTKSNSKRGSESQGKFSKVMQAK 180

Query: 181 DEDEEGLEEEDEEEHGETLCGACGENYASDEFWICCDICEKWFHGKCVKITPARAEHIKQ 240
           DED EGL+EEDEEEHGETLCGACGENYASDEFWICCDICEKWFHGKCVKITPARAEHIKQ
Sbjct: 181 DEDGEGLDEEDEEEHGETLCGACGENYASDEFWICCDICEKWFHGKCVKITPARAEHIKQ 240

Query: 241 YKCPSCSNKRIRP 254
           YKCPSCSNKR RP
Sbjct: 241 YKCPSCSNKRARP 253

[Close]

BLAST of Cp4.1LG11g03490 vs. TrEMBL
Match: A0A067KCV1_JATCU (Uncharacterized protein OS=Jatropha curcas GN=JCGZ_07622 PE=4 SV=1)

HSP 1 Score: 484.6 bits (1246), Expect = 7.5e-134
Identity = 231/253 (91.30%), Postives = 242/253 (95.65%), Query Frame = 1


Query: 1   MDGGAPYNPRTVEEVFRDFKGRRAGLIKALTTDVEEFYQQCDPEKENLCLYGFPSEQWEV 60
           MDGGA YNPRTVEEVFRDFKGRRAG+IKALTTDVEEFYQQCDPEKENLCLYGFPSEQWEV
Sbjct: 1   MDGGASYNPRTVEEVFRDFKGRRAGMIKALTTDVEEFYQQCDPEKENLCLYGFPSEQWEV 60

Query: 61  NLPAEEVPPELPEPALGINFARDGMQEKDWLSLVAVHSDVWLLSVAFYFGARFGFDKTDR 120
           NLPAEEVPPELPEPALGINFARDGMQEKDWLSLVAVHSD WLL+VAFYFGARFGFDK DR
Sbjct: 61  NLPAEEVPPELPEPALGINFARDGMQEKDWLSLVAVHSDAWLLAVAFYFGARFGFDKADR 120

Query: 121 KRLFNMINDLPTIFEVVTGTAKKQVKDKSSVSNHSSNKSKSNPKRSSEPQIKSAKAVQSK 180
           KRLFNMINDLPTIFEVVTGTAKKQVK+KSSVSNHSS K+KSN KR SE Q K +K +QSK
Sbjct: 121 KRLFNMINDLPTIFEVVTGTAKKQVKEKSSVSNHSSTKTKSNSKRGSESQGKYSKVMQSK 180

Query: 181 DEDEEGLEEEDEEEHGETLCGACGENYASDEFWICCDICEKWFHGKCVKITPARAEHIKQ 240
           DED++GLE+E++EEHGETLCGACGENYASDEFWICCDICEKWFHGKCVKITPARAEHIKQ
Sbjct: 181 DEDDDGLEDEEDEEHGETLCGACGENYASDEFWICCDICEKWFHGKCVKITPARAEHIKQ 240

Query: 241 YKCPSCSNKRIRP 254
           YKCPSCSNKR RP
Sbjct: 241 YKCPSCSNKRARP 253

[Close]

BLAST of Cp4.1LG11g03490 vs. TrEMBL
Match: U5FFQ7_POPTR (Uncharacterized protein OS=Populus trichocarpa GN=POPTR_0018s05470g PE=4 SV=1)

HSP 1 Score: 483.4 bits (1243), Expect = 1.7e-133
Identity = 233/254 (91.73%), Postives = 244/254 (96.06%), Query Frame = 1


Query: 1   MDGGAPYNPRTVEEVFRDFKGRRAGLIKALTTDVEEFYQQCDPEKENLCLYGFPSEQWEV 60
           MDGGA YNPRTVEEVFRDFKGRRAG+IKALTTDVEEFYQQCDPEKENLCLYGFPSEQWEV
Sbjct: 1   MDGGASYNPRTVEEVFRDFKGRRAGMIKALTTDVEEFYQQCDPEKENLCLYGFPSEQWEV 60

Query: 61  NLPAEEVPPELPEPALGINFARDGMQEKDWLSLVAVHSDVWLLSVAFYFGARFGFDKTDR 120
           NLPAEEVPPELPEPALGINFARDGMQEKDWLSLVAVHSD WLLSVAFYFG+RFGFDK DR
Sbjct: 61  NLPAEEVPPELPEPALGINFARDGMQEKDWLSLVAVHSDAWLLSVAFYFGSRFGFDKADR 120

Query: 121 KRLFNMINDLPTIFEVVTGTAKKQVKDKSSVSNHSSNKSKSNPK-RSSEPQIKSAKAVQS 180
           KRLF+MINDLPTIFEVVTGTAKKQVK+KSSVSNHSSNK+KSN K R SE Q K +KA+Q+
Sbjct: 121 KRLFSMINDLPTIFEVVTGTAKKQVKEKSSVSNHSSNKTKSNSKQRGSESQGKYSKAMQA 180

Query: 181 KDEDEEGLEEEDEEEHGETLCGACGENYASDEFWICCDICEKWFHGKCVKITPARAEHIK 240
           KDED+EGL+EEDEE+HGETLCGACGENYASDEFWICCDICEKWFHGKCVKITPARAEHIK
Sbjct: 181 KDEDDEGLDEEDEEDHGETLCGACGENYASDEFWICCDICEKWFHGKCVKITPARAEHIK 240

Query: 241 QYKCPSCSNKRIRP 254
           QYKCPSCSNKR RP
Sbjct: 241 QYKCPSCSNKRARP 254

[Close]

BLAST of Cp4.1LG11g03490 vs. TAIR10
Match: AT5G26210.1 (AT5G26210.1 alfin-like 4)

HSP 1 Score: 430.3 bits (1105), Expect = 8.5e-121
Identity = 206/254 (81.10%), Postives = 226/254 (88.98%), Query Frame = 1


Query: 1   MDGGAPYNPRTVEEVFRDFKGRRAGLIKALTTDVEEFYQQCDPEKENLCLYGFPSEQWEV 60
           M+ G  YNPRTVEEVFRDFKGRRAG+IKALTTDV+EF++ CDPEKENLCLYG P+E WEV
Sbjct: 1   MEAGGAYNPRTVEEVFRDFKGRRAGMIKALTTDVQEFFRLCDPEKENLCLYGHPNEHWEV 60

Query: 61  NLPAEEVPPELPEPALGINFARDGMQEKDWLSLVAVHSDVWLLSVAFYFGARFGFDKTDR 120
           NLPAEEVPPELPEP LGINFARDGM EKDWLSLVAVHSD WLL+VAF+FGARFGFDK DR
Sbjct: 61  NLPAEEVPPELPEPVLGINFARDGMAEKDWLSLVAVHSDAWLLAVAFFFGARFGFDKADR 120

Query: 121 KRLFNMINDLPTIFEVVTGTAKKQVKDKSSVSNHSSNKSKSNPKRSSEPQIKSAKAVQSK 180
           KRLFNM+NDLPTIFEVV GTAKKQ KDKSSVSN+SSN+SKS+ KR SE + K +K     
Sbjct: 121 KRLFNMVNDLPTIFEVVAGTAKKQGKDKSSVSNNSSNRSKSSSKRGSESRAKFSKPEPKD 180

Query: 181 D--EDEEGLEEEDEEEHGETLCGACGENYASDEFWICCDICEKWFHGKCVKITPARAEHI 240
           D  E+EEG+EEEDE+E GET CGACGE+YA+DEFWICCD+CE WFHGKCVKITPARAEHI
Sbjct: 181 DEEEEEEGVEEEDEDEQGETQCGACGESYAADEFWICCDLCEMWFHGKCVKITPARAEHI 240

Query: 241 KQYKCPSCSNKRIR 253
           KQYKCPSCSNKR R
Sbjct: 241 KQYKCPSCSNKRAR 254

[Close]

BLAST of Cp4.1LG11g03490 vs. TAIR10
Match: AT5G20510.1 (AT5G20510.1 alfin-like 5)

HSP 1 Score: 410.2 bits (1053), Expect = 9.1e-115
Identity = 195/261 (74.71%), Postives = 229/261 (87.74%), Query Frame = 1


Query: 1   MDGG-APYNPRTVEEVFRDFKGRRAGLIKALTTDVEEFYQQCDPEKENLCLYGFPSEQWE 60
           M+GG A Y+PRTVEEVFRDFKGRRAG+I+ALTTDVE+F+QQCDPEK+NLCLYGFP+E WE
Sbjct: 1   MEGGTAHYSPRTVEEVFRDFKGRRAGIIQALTTDVEDFFQQCDPEKQNLCLYGFPNEVWE 60

Query: 61  VNLPAEEVPPELPEPALGINFARDGMQEKDWLSLVAVHSDVWLLSVAFYFGARFGFDKTD 120
           VNLPAEEVPPELPEPALGINFARDGMQE++WLSLVAVHSD WLLSV+FYFG+RFGFD+ D
Sbjct: 61  VNLPAEEVPPELPEPALGINFARDGMQERNWLSLVAVHSDAWLLSVSFYFGSRFGFDRAD 120

Query: 121 RKRLFNMINDLPTIFEVVTGTAKKQVKDKSSVSNHSSNKSKSNPKRSSEPQIKSAKAVQS 180
           RKRLF+MIN++PT++EVVTG A+KQ K+  S +N + N+SKSN K     + KS+K + +
Sbjct: 121 RKRLFSMINEVPTVYEVVTGNAEKQTKEMPSSANQNGNRSKSNSKMRG-LESKSSKTIHA 180

Query: 181 KDEDE-------EGLEEEDEEEHGETLCGACGENYASDEFWICCDICEKWFHGKCVKITP 240
           KDE+E       E  E+EDE+EHGETLCGACG+NYASDEFWICCD+CEKWFHG+CVKITP
Sbjct: 181 KDEEEGLELEEGEEEEDEDEDEHGETLCGACGDNYASDEFWICCDMCEKWFHGECVKITP 240

Query: 241 ARAEHIKQYKCPSCSNKRIRP 254
           ARAEHIK YKCP+CSNKR RP
Sbjct: 241 ARAEHIKHYKCPTCSNKRARP 260

[Close]

BLAST of Cp4.1LG11g03490 vs. TAIR10
Match: AT3G42790.1 (AT3G42790.1 alfin-like 3)

HSP 1 Score: 405.2 bits (1040), Expect = 2.9e-113
Identity = 197/254 (77.56%), Postives = 225/254 (88.58%), Query Frame = 1


Query: 1   MDGGAP-YNPRTVEEVFRDFKGRRAGLIKALTTDVEEFYQQCDPEKENLCLYGFPSEQWE 60
           M+GGA  YNPRTVEEVF+DFKGRR  ++KALTTDV+EFYQQCDPEKENLCLYG P+E+WE
Sbjct: 1   MEGGAALYNPRTVEEVFKDFKGRRTAIVKALTTDVQEFYQQCDPEKENLCLYGLPNEEWE 60

Query: 61  VNLPAEEVPPELPEPALGINFARDGMQEKDWLSLVAVHSDVWLLSVAFYFGARFGFDKTD 120
           VNLPAEEVPPELPEPALGINFARDG+ EK+WLSLVA+HSD WLLSV+FYFG+RF F K +
Sbjct: 61  VNLPAEEVPPELPEPALGINFARDGLSEKEWLSLVAIHSDAWLLSVSFYFGSRFSFHKEE 120

Query: 121 RKRLFNMINDLPTIFEVVTGTAKKQVKDKSSVSNHSSNKSKSNPK-RSSEPQIKSAKAVQ 180
           RKRLFNMIND+PTIFEVVTG AK   KDKSS +N + NKSKSN K R+SE   KS+K  Q
Sbjct: 121 RKRLFNMINDVPTIFEVVTGMAK--AKDKSSAANQNGNKSKSNSKVRTSEG--KSSKTKQ 180

Query: 181 SKDEDEEGLEEEDEEEHGETLCGACGENYASDEFWICCDICEKWFHGKCVKITPARAEHI 240
            K+EDEE ++E+DE++HGETLCGACG++  +DEFWICCD+CEKWFHGKCVKITPARAEHI
Sbjct: 181 PKEEDEE-IDEDDEDDHGETLCGACGDSDGADEFWICCDLCEKWFHGKCVKITPARAEHI 240

Query: 241 KQYKCPSCSNKRIR 253
           KQYKCPSCSNKR R
Sbjct: 241 KQYKCPSCSNKRAR 249

[Close]

BLAST of Cp4.1LG11g03490 vs. TAIR10
Match: AT2G02470.1 (AT2G02470.1 alfin-like 6)

HSP 1 Score: 366.3 bits (939), Expect = 1.5e-101
Identity = 185/257 (71.98%), Postives = 205/257 (79.77%), Query Frame = 1


Query: 1   MDGGAPYNPRTVEEVFRDFKGRRAGLIKALTTDVEEFYQQCDPEKENLCLYGFPSEQWEV 60
           M+G     PRTVEEVF DF+GRRAGLIKALT D+ +FYQ CDPEKENLCLYG P+E WEV
Sbjct: 1   MEGITHPIPRTVEEVFSDFRGRRAGLIKALTNDMVKFYQTCDPEKENLCLYGLPNETWEV 60

Query: 61  NLPAEEVPPELPEPALGINFARDGMQEKDWLSLVAVHSDVWLLSVAFYFGARFGFDKTDR 120
           NLP EEVPPELPEPALGINFARDGMQEKDW+SLVAVHSD WLLSVAFYFGARFGF K +R
Sbjct: 61  NLPVEEVPPELPEPALGINFARDGMQEKDWVSLVAVHSDSWLLSVAFYFGARFGFGKNER 120

Query: 121 KRLFNMINDLPTIFEVVTGTAKKQVKDKSSVSNHSSNKSKSNPKRSSEPQIKSAK--AVQ 180
           KRLF MIN+LPTIFEVV+G A KQ KD S  +N+S +K      R SE   K AK  +  
Sbjct: 121 KRLFQMINELPTIFEVVSGNA-KQSKDLSVNNNNSKSKPSGVKSRQSESLSKVAKMSSPP 180

Query: 181 SKDEDEEGLEEEDEEEHGE--TLCGACGENYASDEFWICCDICEKWFHGKCVKITPARAE 240
            K+E+EE  E EDE E  E   +CGACG+NY +DEFWICCD CEKWFHGKCVKITPA+AE
Sbjct: 181 PKEEEEEEDESEDESEDDEQGAVCGACGDNYGTDEFWICCDACEKWFHGKCVKITPAKAE 240

Query: 241 HIKQYKCPSCSNKRIRP 254
           HIK YKCP+CSNKR RP
Sbjct: 241 HIKHYKCPTCSNKRARP 256

[Close]

BLAST of Cp4.1LG11g03490 vs. TAIR10
Match: AT1G14510.1 (AT1G14510.1 alfin-like 7)

HSP 1 Score: 365.2 bits (936), Expect = 3.4e-101
Identity = 178/243 (73.25%), Postives = 201/243 (82.72%), Query Frame = 1


Query: 9   PRTVEEVFRDFKGRRAGLIKALTTDVEEFYQQCDPEKENLCLYGFPSEQWEVNLPAEEVP 68
           PRTVEEVF DF+GRRAGLIKAL+TDV++FY QCDPEKENLCLYG P+E WEVNLP EEVP
Sbjct: 9   PRTVEEVFSDFRGRRAGLIKALSTDVQKFYHQCDPEKENLCLYGLPNETWEVNLPVEEVP 68

Query: 69  PELPEPALGINFARDGMQEKDWLSLVAVHSDVWLLSVAFYFGARFGFDKTDRKRLFNMIN 128
           PELPEPALGINFARDGMQEKDW+SLVAVHSD WL+SVAFYFGARFGF K +RKRLF MIN
Sbjct: 69  PELPEPALGINFARDGMQEKDWISLVAVHSDSWLISVAFYFGARFGFGKNERKRLFQMIN 128

Query: 129 DLPTIFEVVTGTAKKQVKDKSSVSNHSSNKSKSNPKRSSEPQIKSAK-AVQSKDEDEEGL 188
           DLPTIFEVVTG AK Q KD+S+  N S +KS     R SE   K++K +   + EDE G 
Sbjct: 129 DLPTIFEVVTGNAK-QSKDQSANHNSSRSKSSGGKPRHSESHTKASKMSPPPRKEDESGD 188

Query: 189 EEEDEEEHGETLCGACGENYASDEFWICCDICEKWFHGKCVKITPARAEHIKQYKCPSCS 248
           E+ED+E+    +CGACG+NY  DEFWICCD CEKWFHGKCVKITPA+AEHIK YKCPSC+
Sbjct: 189 EDEDDEQG--AVCGACGDNYGGDEFWICCDACEKWFHGKCVKITPAKAEHIKHYKCPSCT 248

Query: 249 NKR 251
             +
Sbjct: 249 TSK 248

[Close]

BLAST of Cp4.1LG11g03490 vs. NCBI nr
Match: gi|659089469|ref|XP_008445525.1| (PREDICTED: PHD finger protein ALFIN-LIKE 4 [Cucumis melo])

HSP 1 Score: 515.8 bits (1327), Expect = 4.4e-143
Identity = 249/253 (98.42%), Postives = 251/253 (99.21%), Query Frame = 1


Query: 1   MDGGAPYNPRTVEEVFRDFKGRRAGLIKALTTDVEEFYQQCDPEKENLCLYGFPSEQWEV 60
           MDGGAPYNPRTVEEVFRDFKGRRAGLIKALTTDVEEFYQQCDPEKENLCLYGFPSEQWEV
Sbjct: 1   MDGGAPYNPRTVEEVFRDFKGRRAGLIKALTTDVEEFYQQCDPEKENLCLYGFPSEQWEV 60

Query: 61  NLPAEEVPPELPEPALGINFARDGMQEKDWLSLVAVHSDVWLLSVAFYFGARFGFDKTDR 120
           NLPAEEVPPELPEPALGINFARDGMQEKDWLSLVAVHSDVWLLSVAFYFGARFGFDKTDR
Sbjct: 61  NLPAEEVPPELPEPALGINFARDGMQEKDWLSLVAVHSDVWLLSVAFYFGARFGFDKTDR 120

Query: 121 KRLFNMINDLPTIFEVVTGTAKKQVKDKSSVSNHSSNKSKSNPKRSSEPQIKSAKAVQSK 180
           KRLFNMINDLPTIFEVVTGTAKKQVKDKSSVSNHSSNKSKSN KRSSEPQIK+ KAVQSK
Sbjct: 121 KRLFNMINDLPTIFEVVTGTAKKQVKDKSSVSNHSSNKSKSNSKRSSEPQIKNTKAVQSK 180

Query: 181 DEDEEGLEEEDEEEHGETLCGACGENYASDEFWICCDICEKWFHGKCVKITPARAEHIKQ 240
           DE+EEGLEEEDEEEHGETLCGACGENYASDEFWICCDICEKWFHGKCVKITPARAEHIKQ
Sbjct: 181 DEEEEGLEEEDEEEHGETLCGACGENYASDEFWICCDICEKWFHGKCVKITPARAEHIKQ 240

Query: 241 YKCPSCSNKRIRP 254
           YKCPSCSNKRIRP
Sbjct: 241 YKCPSCSNKRIRP 253

[Close]

BLAST of Cp4.1LG11g03490 vs. NCBI nr
Match: gi|449452919|ref|XP_004144206.1| (PREDICTED: PHD finger protein ALFIN-LIKE 4 isoform X1 [Cucumis sativus])

HSP 1 Score: 509.6 bits (1311), Expect = 3.1e-141
Identity = 248/254 (97.64%), Postives = 251/254 (98.82%), Query Frame = 1


Query: 1   MDGGAPYNPRTVEEVFRDFKGRRAGLIKALTTDVEEFYQQCDPEKENLCLYGFPSEQWEV 60
           MDGGAPYNPRTVEEVFRDFKGRRAGLIKALTTDVEEFYQQCDPEKENLCLYGFPSEQWEV
Sbjct: 1   MDGGAPYNPRTVEEVFRDFKGRRAGLIKALTTDVEEFYQQCDPEKENLCLYGFPSEQWEV 60

Query: 61  NLPAEEVPPELPEPALGINFARDGMQEKDWLSLVAVHSDVWLLSVAFYFGARFGFDKTDR 120
           NLPAEEVPPELPEPALGINFARDGMQEKDWLSLVAVHSDVWLLSVAFYFGARFGFDKTDR
Sbjct: 61  NLPAEEVPPELPEPALGINFARDGMQEKDWLSLVAVHSDVWLLSVAFYFGARFGFDKTDR 120

Query: 121 KRLFNMINDLPTIFEVVTGTAKKQVKDKSSVSNHSSNKSKSNPKRSSEPQIKSAKAVQSK 180
           KRLFNMINDLPTIFEVVTGTAKKQVKDKSSVSNHSSNKSKSN KRSSEPQIK+ KAVQSK
Sbjct: 121 KRLFNMINDLPTIFEVVTGTAKKQVKDKSSVSNHSSNKSKSNSKRSSEPQIKTTKAVQSK 180

Query: 181 DEDEE-GLEEEDEEEHGETLCGACGENYASDEFWICCDICEKWFHGKCVKITPARAEHIK 240
           DE+EE GLEEE+EEEHGETLCGACGENYASDEFWICCDICEKWFHGKCVKITPARAEHIK
Sbjct: 181 DEEEEGGLEEEEEEEHGETLCGACGENYASDEFWICCDICEKWFHGKCVKITPARAEHIK 240

Query: 241 QYKCPSCSNKRIRP 254
           QYKCPSCSNKRIRP
Sbjct: 241 QYKCPSCSNKRIRP 254

[Close]

BLAST of Cp4.1LG11g03490 vs. NCBI nr
Match: gi|224142915|ref|XP_002324777.1| (PHD finger family protein [Populus trichocarpa])

HSP 1 Score: 488.0 bits (1255), Expect = 9.7e-135
Identity = 233/253 (92.09%), Postives = 244/253 (96.44%), Query Frame = 1


Query: 1   MDGGAPYNPRTVEEVFRDFKGRRAGLIKALTTDVEEFYQQCDPEKENLCLYGFPSEQWEV 60
           MDGGA YNPRTVEEVFRDFKGRRAG+IKALTTDVEEFYQQCDPEKENLCLYGFPSEQWEV
Sbjct: 1   MDGGASYNPRTVEEVFRDFKGRRAGMIKALTTDVEEFYQQCDPEKENLCLYGFPSEQWEV 60

Query: 61  NLPAEEVPPELPEPALGINFARDGMQEKDWLSLVAVHSDVWLLSVAFYFGARFGFDKTDR 120
           NLPAEEVPPELPEPALGINFARDGMQEKDWLSLVAVHSD WLLSVAFYFG+RFGFDK DR
Sbjct: 61  NLPAEEVPPELPEPALGINFARDGMQEKDWLSLVAVHSDAWLLSVAFYFGSRFGFDKADR 120

Query: 121 KRLFNMINDLPTIFEVVTGTAKKQVKDKSSVSNHSSNKSKSNPKRSSEPQIKSAKAVQSK 180
           KRLF+MINDLPTIFEVVTGTAKKQVK+KSSVSNHSSNK+KSN KR SE Q K +KA+Q+K
Sbjct: 121 KRLFSMINDLPTIFEVVTGTAKKQVKEKSSVSNHSSNKTKSNSKRGSESQGKYSKAMQAK 180

Query: 181 DEDEEGLEEEDEEEHGETLCGACGENYASDEFWICCDICEKWFHGKCVKITPARAEHIKQ 240
           DED+EGL+EEDEE+HGETLCGACGENYASDEFWICCDICEKWFHGKCVKITPARAEHIKQ
Sbjct: 181 DEDDEGLDEEDEEDHGETLCGACGENYASDEFWICCDICEKWFHGKCVKITPARAEHIKQ 240

Query: 241 YKCPSCSNKRIRP 254
           YKCPSCSNKR RP
Sbjct: 241 YKCPSCSNKRARP 253

[Close]

BLAST of Cp4.1LG11g03490 vs. NCBI nr
Match: gi|225429632|ref|XP_002280895.1| (PREDICTED: PHD finger protein ALFIN-LIKE 4 [Vitis vinifera])

HSP 1 Score: 488.0 bits (1255), Expect = 9.7e-135
Identity = 233/252 (92.46%), Postives = 242/252 (96.03%), Query Frame = 1


Query: 1   MDGGAPYNPRTVEEVFRDFKGRRAGLIKALTTDVEEFYQQCDPEKENLCLYGFPSEQWEV 60
           MDGG PYNPRTVEEVFRDFKGRRAG+IKALTTDVEEFYQQCDP+KENLCLYGFPSEQWEV
Sbjct: 1   MDGGPPYNPRTVEEVFRDFKGRRAGMIKALTTDVEEFYQQCDPDKENLCLYGFPSEQWEV 60

Query: 61  NLPAEEVPPELPEPALGINFARDGMQEKDWLSLVAVHSDVWLLSVAFYFGARFGFDKTDR 120
           NLPAEEVPPELPEPALGINFARDGMQEKDWLSLVAVHSD WLL+VAFYFGARFGFDK DR
Sbjct: 61  NLPAEEVPPELPEPALGINFARDGMQEKDWLSLVAVHSDAWLLAVAFYFGARFGFDKADR 120

Query: 121 KRLFNMINDLPTIFEVVTGTAKKQVKDKSSVSNHSSNKSKSNPKRSSEPQIKSAKAVQSK 180
           KRLFNMINDLPTIFEVVTGTAKKQVK+KSSVSNHSSNKSKSN KR SE Q K +K +Q+K
Sbjct: 121 KRLFNMINDLPTIFEVVTGTAKKQVKEKSSVSNHSSNKSKSNSKRGSESQGKYSKPLQAK 180

Query: 181 DEDEEGLEEEDEEEHGETLCGACGENYASDEFWICCDICEKWFHGKCVKITPARAEHIKQ 240
           DEDEEGLEEE+EEEHGETLCGACGENYASDEFWICCD+CEKWFHGKCVKITPARAEHIKQ
Sbjct: 181 DEDEEGLEEEEEEEHGETLCGACGENYASDEFWICCDVCEKWFHGKCVKITPARAEHIKQ 240

Query: 241 YKCPSCSNKRIR 253
           YKCPSCSNKR R
Sbjct: 241 YKCPSCSNKRAR 252

[Close]

BLAST of Cp4.1LG11g03490 vs. NCBI nr
Match: gi|224088776|ref|XP_002308535.1| (PHD finger family protein [Populus trichocarpa])

HSP 1 Score: 486.5 bits (1251), Expect = 2.8e-134
Identity = 232/253 (91.70%), Postives = 242/253 (95.65%), Query Frame = 1


Query: 1   MDGGAPYNPRTVEEVFRDFKGRRAGLIKALTTDVEEFYQQCDPEKENLCLYGFPSEQWEV 60
           MDGGA YNPRTVEEVFRDFKGRRAG+IKALTTDVEEFYQQCDPEKENLCLYGFPSEQWEV
Sbjct: 1   MDGGASYNPRTVEEVFRDFKGRRAGMIKALTTDVEEFYQQCDPEKENLCLYGFPSEQWEV 60

Query: 61  NLPAEEVPPELPEPALGINFARDGMQEKDWLSLVAVHSDVWLLSVAFYFGARFGFDKTDR 120
           NLPAEEVPPELPEPALGINFARDGMQEKDWLSLVAVHSD WLLSV+FYFG+RFGFDK DR
Sbjct: 61  NLPAEEVPPELPEPALGINFARDGMQEKDWLSLVAVHSDAWLLSVSFYFGSRFGFDKADR 120

Query: 121 KRLFNMINDLPTIFEVVTGTAKKQVKDKSSVSNHSSNKSKSNPKRSSEPQIKSAKAVQSK 180
           KRLFNMINDLPT+FEVVTGTAKKQVK+KSSVSNHSSNK+KSN KR SE Q K +K +Q+K
Sbjct: 121 KRLFNMINDLPTVFEVVTGTAKKQVKEKSSVSNHSSNKTKSNSKRGSESQGKFSKVMQAK 180

Query: 181 DEDEEGLEEEDEEEHGETLCGACGENYASDEFWICCDICEKWFHGKCVKITPARAEHIKQ 240
           DED EGL+EEDEEEHGETLCGACGENYASDEFWICCDICEKWFHGKCVKITPARAEHIKQ
Sbjct: 181 DEDGEGLDEEDEEEHGETLCGACGENYASDEFWICCDICEKWFHGKCVKITPARAEHIKQ 240

Query: 241 YKCPSCSNKRIRP 254
           YKCPSCSNKR RP
Sbjct: 241 YKCPSCSNKRARP 253

The following BLAST results are available for this feature:

BLAST of Cp4.1LG11g03490 vs. Swiss-Prot


Match Name	E-value	Identity	Description
ALFL4_ARATH	1.5e-119	81.10	PHD finger protein ALFIN-LIKE 4 OS=Arabidopsis thaliana GN=AL4 PE=1 SV=2	[more]
ALFL5_ARATH	1.6e-113	74.71	PHD finger protein ALFIN-LIKE 5 OS=Arabidopsis thaliana GN=AL5 PE=2 SV=1	[more]
ALFL3_ARATH	5.2e-112	77.56	PHD finger protein ALFIN-LIKE 3 OS=Arabidopsis thaliana GN=AL3 PE=1 SV=1	[more]
ALFL9_ORYSI	3.5e-108	74.90	PHD finger protein ALFIN-LIKE 9 OS=Oryza sativa subsp. indica GN=OsI_26819 PE=3 ...	[more]
ALFL9_ORYSJ	4.6e-108	74.62	PHD finger protein ALFIN-LIKE 9 OS=Oryza sativa subsp. japonica GN=Os07g0608400 ...	[more]

BLAST of Cp4.1LG11g03490 vs. TrEMBL


Match Name	E-value	Identity	Description
A0A0A0KDK0_CUCSA	2.2e-141	97.64	Uncharacterized protein OS=Cucumis sativus GN=Csa_6G363000 PE=4 SV=1	[more]
B9IKC9_POPTR	6.8e-135	92.09	PHD finger family protein OS=Populus trichocarpa GN=POPTR_0018s05470g PE=4 SV=1	[more]
B9HD31_POPTR	2.0e-134	91.70	PHD finger family protein OS=Populus trichocarpa GN=POPTR_0006s23990g PE=4 SV=1	[more]
A0A067KCV1_JATCU	7.5e-134	91.30	Uncharacterized protein OS=Jatropha curcas GN=JCGZ_07622 PE=4 SV=1	[more]
U5FFQ7_POPTR	1.7e-133	91.73	Uncharacterized protein OS=Populus trichocarpa GN=POPTR_0018s05470g PE=4 SV=1	[more]

BLAST of Cp4.1LG11g03490 vs. TAIR10


Match Name	E-value	Identity	Description
AT5G26210.1	8.5e-121	81.10	alfin-like 4	[more]
AT5G20510.1	9.1e-115	74.71	alfin-like 5	[more]
AT3G42790.1	2.9e-113	77.56	alfin-like 3	[more]
AT2G02470.1	1.5e-101	71.98	alfin-like 6	[more]
AT1G14510.1	3.4e-101	73.25	alfin-like 7	[more]

BLAST of Cp4.1LG11g03490 vs. NCBI nr


Match Name	E-value	Identity	Description
gi\|659089469\|ref\|XP_008445525.1\|	4.4e-143	98.42	PREDICTED: PHD finger protein ALFIN-LIKE 4 [Cucumis melo]	[more]
gi\|449452919\|ref\|XP_004144206.1\|	3.1e-141	97.64	PREDICTED: PHD finger protein ALFIN-LIKE 4 isoform X1 [Cucumis sativus]	[more]
gi\|224142915\|ref\|XP_002324777.1\|	9.7e-135	92.09	PHD finger family protein [Populus trichocarpa]	[more]
gi\|225429632\|ref\|XP_002280895.1\|	9.7e-135	92.46	PREDICTED: PHD finger protein ALFIN-LIKE 4 [Vitis vinifera]	[more]
gi\|224088776\|ref\|XP_002308535.1\|	2.8e-134	91.70	PHD finger family protein [Populus trichocarpa]	[more]

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **Molecular Function**
Term	Definition
GO:0042393	histone binding
GO:0008270	zinc ion binding
GO:0005515	protein binding

Vocabulary: **Biological Process**
Term	Definition
GO:0006355	regulation of transcription, DNA-templated

Vocabulary: **INTERPRO**
Term	Definition
IPR021998	Alfin
IPR019787	Znf_PHD-finger
IPR019786	Zinc_finger_PHD-type_CS
IPR013083	Znf_RING/FYVE/PHD
IPR011011	Znf_FYVE_PHD
IPR001965	Znf_PHD

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0006355	regulation of transcription, DNA-templated
cellular_component	GO:0005575	cellular_component
molecular_function	GO:0042393	histone binding
molecular_function	GO:0008270	zinc ion binding
molecular_function	GO:0005515	protein binding
molecular_function	GO:0046872	metal ion binding

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Cp4.1LG11g03490.1	Cp4.1LG11g03490.1	mRNA

InterPro

Analysis Name: InterPro Annotations of Cucurbita pepo
Date Performed: 2017-12-02


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR001965	Zinc finger, PHD-type	SMART	SM00249	PHD_3	coord: 199..247 score: 2.
IPR011011	Zinc finger, FYVE/PHD-type	unknown	SSF57903	FYVE/PHD zinc finger	coord: 189..250 score: 2.21
IPR013083	Zinc finger, RING/FYVE/PHD-type	GENE3D	G3DSA:3.30.40.10		coord: 192..249 score: 3.4
IPR019786	Zinc finger, PHD-type, conserved site	PROSITE	PS01359	ZF_PHD_1	coord: 200..246 scor
IPR019787	Zinc finger, PHD-finger	PFAM	PF00628	PHD	coord: 200..248 score: 1.4
IPR019787	Zinc finger, PHD-finger	PROFILE	PS50016	ZF_PHD_2	coord: 197..249 score: 9
IPR021998	Alfin	PFAM	PF12165	DUF3594	coord: 11..138 score: 2.6
None	No IPR available	PANTHER	PTHR12321	CPG BINDING PROTEIN	coord: 1..253 score: 1.3E
None	No IPR available	PANTHER	PTHR12321:SF61	PHD FINGER PROTEIN ALFIN-LIKE 5	coord: 1..253 score: 1.3E

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
Cp4.1LG11g03490	Cucsa.056090	Cucumber (Gy14) v1	cgycpeB0068
Cp4.1LG11g03490	CmaCh05G004160	Cucurbita maxima (Rimu)	cmacpeB766
Cp4.1LG11g03490	CmoCh05G004300	Cucurbita moschata (Rifu)	cmocpeB720
Cp4.1LG11g03490	Cla021977	Watermelon (97103) v1	cpewmB099
Cp4.1LG11g03490	Csa6G363000	Cucumber (Chinese Long) v2	cpecuB119
Cp4.1LG11g03490	MELO3C011479	Melon (DHL92) v3.5.1	cpemeB088
Cp4.1LG11g03490	ClCG08G009920	Watermelon (Charleston Gray)	cpewcgB122
Cp4.1LG11g03490	CSPI06G19140	Wild cucumber (PI 183967)	cpecpiB117
Cp4.1LG11g03490	Lsi08G008410	Bottle gourd (USVL1VR-Ls)	cpelsiB098
Cp4.1LG11g03490	MELO3C011479.2	Melon (DHL92) v3.6.1	cpemedB111
Cp4.1LG11g03490	CsaV3_6G032020	Cucumber (Chinese Long) v3	cpecucB0131
Cp4.1LG11g03490	Bhi04G001178	Wax gourd	cpewgoB0145
Cp4.1LG11g03490	CsGy6G018580	Cucumber (Gy14) v2	cgybcpeB714
Cp4.1LG11g03490	Carg09305	Silver-seed gourd	carcpeB0199

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:


Gene	Organism	Block
Cp4.1LG11g03490	Wax gourd	cpewgoB0138
Cp4.1LG11g03490	Silver-seed gourd	carcpeB1352