Cp4.1LG07g07310.1 (mRNA) Cucurbita pepo (Zucchini)
The following sequences are available for this feature:
Legend: five_prime_UTRCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.AAGAACAGAGTGAACCCAAACCGAAGGCTAATTAAACCTAACCCACGCCGCATCAAAACCCCTCTCAATCTCTCTTCCGTCTCTCTCTCTCTCGGCTTCTCTCGGTCGCTCAAGGTTTGTTCGTGATTGAATGCCTTTTGTTCTTTTCAAGTTTTTTATTGGATTTCTGTTGTTGCAATCACAATTGGATGTTTGTTTTGCTCCGTCTCTCATTCTCACTGTTTTAGAATGTTGTTTCAATGTTAAATATTGGAGATTTATTAGTAATCGGTGTCATTTGATGGTTATTATCGCTGCTTCGTTTTAATACCGATGCGATTTTAGGTAATTTGGTGTTTAGTACTTTGTCCAGACTGAGAATGGTGGTTTTGGCGAATGCCTGGTTTAATTCTTCTGTTTTTGACATTCTGGATACTCTTTGCAATTGTTCATTTTCCTTATTGATTTCCAGCTTTAGACTGGTTCTAGGATTATCAACTTTCCAGAGATCTGATTAGTTTCTCCTTAGCTTTTGTTCGTTTGGTTATATTATCGGAGGTTATTATTCTGAAGATGTAAGAACTTTTATAACTTCCGAGGTAACTACTAATTTGATGGTCTTAATGAAGTTTGGAACTTTTTAAGTTTGGTAATAGTTATTAGTGACCTCTGGTGTTTCTGATATTTGGAGCTTTAAGAGAAGGTTTACTGTCATGTGTGGGTTTGATTTTGGGTTGGGTTGGGTTGGGACATCGGTTTGCTATAAACGGTTCGATCATGTTTATATTCCCAGACGAATCTAATCTAACCTGTGTAAAGCCTTAGTAATCAATGAAAGCATTCTTGCCCCAATGTAACAAAGACCTCTTATACTGTAGAACTAAACCCGACAAAATATTTGGCCAATCTAAGAATATAGATTATGAAATGAAAAATATATGGAGGTCTATAGCCTCTTCAGGAAATCTACTTTTGTCCTCAAATCTGAACTCATCTCATATAGATTTTCCCCGCTCTTTATATCTTTCTTGTTTTCCTTGGAAGTGTGGGGTTTTAGGGTTTGAGAGCTATTTGATGTTTGTTTCAGGAACCCTAGACAGCTTTTGTCCTCAAATCTGAACTCATCTCATATAGATTTGCCAAGATGGGTATGTTAAACACAACTTTCCTCATTGTTCTACATATCTCAATTTTTCGTTGTTTCTTTTTATTAATCTTGGAGGACTTTTTGTTGTTAGGTATTTCTCGTGATTCTATGCACAAGAGGCGTGCCACAGGAGGCAAGAAGAAAGCCTGGAGGAAGAAGAGAAAGTAATTACTACTTCTATTCAGCTGAGTGCAATTTGTATCAGTTTTTGCTTTCATTGCATTTTTTGCCAACTGATCAACAAAAATTTTGTACTTTTCTTTCTATTCTTGGTTTTTGCGGTGATTTGTAGGTTTAGCTGAGATATTTATTATTATTATTATTGTGGATAACTGGTGAAGTAAGTGGTGGCAAGAGTTTGTTGTTTGTTATCTTTTTCAATATATATTTCAATAATCTCGATTAATCTGCATTATTTATCTAATCTCCTCTGGTTGATTTTTGTATATTTCTGTTCTAAATAAATTGCTCGTCCCATGTTACATTTTCACATTTGTTTAATGAACAGCATAATTTCTCCTATTGATGTAGAAACCTAGTTTCTTTGAATATTTGTGCTGTGTTACAGTTTGATGTTTTACAATGTAAAAGTTGAAATGTTTCCTTCTGTAAGTTATATTTATTATGCTTTGGTACTGAAAGTTCAACCATCACAGAAAAATTTATGTCGATTCAAGGTACAACTTTCATTTTCTCTTCATGTTTGCAGTCCTTTTGATATTGCATCTTTCCCTTTGTTTGTAAAGGTATGAGCTCGGCAGGCAACCTGCCAACACCAAGATATCCAGTGATAAATCAATCCGGAGGATTAGAGTTCGTGGGGGAAATGTGAAGTGGCGAGCTTTTAGGCTTGATACTGGAAACTACTCTTGGGGTAGTGAGGCTGTGACTAGAAAGTCCCGTATTCTTGATGTGGTCTACAATGCATCTAATAATGAGCTTGTTCGTACTCAAACTTTGGTGAAGAGTGCCATCGTTCAAGTTGATGCAGCACCATTTAAACAGTGGTATCTTCAGCATTATGGAGTGGATATTGGACGTAAGAAGAAGACCACAGCATCTTCTAAGAAGGAAGAGGTAGAGCAACACTTGATCCAAAATACAACCTAATTTTGATGGATAATTATGACATTCTTAATATTTATGATACAAAACTTGTTCCAAAATACAACTTAATTTTAATGGTTTATAGGAAGCTGATGCTGCCACTGAGGAGGTAAAGAAGAGTAACCACGTGCAGCGCAAAATAGAGAAACGTCAGCAGGACCGTAAGCTTGACCCACACATCGAAGAACAATTCAGCAGTGGTCGTTTGATGGCGTGTATCTCATCAAGACCTGGTCAATGTGGCCGAGCAGATGGGTAAGCATTATGAATCTCATAACGATTCTTGATTCTCTTGTGTTCTTTCAAACACGTTGAGCAAAATCATTGAACGTGGAGAAGAGTTTTTGGTTTATGTTGCCTGAGGCCTTGCAAATTTTTGACAGATATATTTTGGAAGGCAAGGAACTTGAATTTTACATGAAGAAGCTCCAAAGGAAGAAGGGTAAAGGAGCTGGTGCTTCATAGATTTTGTTGTCGAGTTCTTTTCGGCTCGAGTTTCTTGTTCCTAATTCTTCGTAGGACGCCAATGATTGCAGCTGAGATGAAACTGCTATTTTGGAACTTCAGTTTTGCTGGTAATAGTTTAATTACAATACCTAGCGATTTTCATGTTAACAACAGTTTGTTTATTAGCTTTAAAAGCTTTAAAGTTTAATTGTTTCCCAGTCTATCGTCTCTCCAATTCCCTTCCATTCCTTTCGACGCTTTTCAATTGATGATCACAGTAGTTTTTTATTCGGTTTCAATTGTATGCATGGACTTGGAAATTGTGCATAAAGAAAGAATTTATGACTAATTTGTTTTTAATTCAAAAGTGAATGTATGATATAAGCCCTATAACTTGTGGTTGCA AAGAACAGAGTGAACCCAAACCGAAGGCTAATTAAACCTAACCCACGCCGCATCAAAACCCCTCTCAATCTCTCTTCCGTCTCTCTCTCTCTCGGCTTCTCTCGGTCGCTCAAGGAACCCTAGACAGCTTTTGTCCTCAAATCTGAACTCATCTCATATAGATTTGCCAAGATGGGTATTTCTCGTGATTCTATGCACAAGAGGCGTGCCACAGGAGGCAAGAAGAAAGCCTGGAGGAAGAAGAGAAAGTATGAGCTCGGCAGGCAACCTGCCAACACCAAGATATCCAGTGATAAATCAATCCGGAGGATTAGAGTTCGTGGGGGAAATGTGAAGTGGCGAGCTTTTAGGCTTGATACTGGAAACTACTCTTGGGGTAGTGAGGCTGTGACTAGAAAGTCCCGTATTCTTGATGTGGTCTACAATGCATCTAATAATGAGCTTGTTCGTACTCAAACTTTGGTGAAGAGTGCCATCGTTCAAGTTGATGCAGCACCATTTAAACAGTGGTATCTTCAGCATTATGGAGTGGATATTGGACGTAAGAAGAAGACCACAGCATCTTCTAAGAAGGAAGAGGAAGCTGATGCTGCCACTGAGGAGGTAAAGAAGAGTAACCACGTGCAGCGCAAAATAGAGAAACGTCAGCAGGACCGTAAGCTTGACCCACACATCGAAGAACAATTCAGCAGTGGTCGTTTGATGGCGTGTATCTCATCAAGACCTGGTCAATGTGGCCGAGCAGATGGATATATTTTGGAAGGCAAGGAACTTGAATTTTACATGAAGAAGCTCCAAAGGAAGAAGGGTAAAGGAGCTGGTGCTTCATAGATTTTGTTGTCGAGTTCTTTTCGGCTCGAGTTTCTTGTTCCTAATTCTTCGTAGGACGCCAATGATTGCAGCTGAGATGAAACTGCTATTTTGGAACTTCAGTTTTGCTGGTAATAGTTTAATTACAATACCTAGCGATTTTCATGTTAACAACAGTTTGTTTATTAGCTTTAAAAGCTTTAAAGTTTAATTGTTTCCCAGTCTATCGTCTCTCCAATTCCCTTCCATTCCTTTCGACGCTTTTCAATTGATGATCACAGTAGTTTTTTATTCGGTTTCAATTGTATGCATGGACTTGGAAATTGTGCATAAAGAAAGAATTTATGACTAATTTGTTTTTAATTCAAAAGTGAATGTATGATATAAGCCCTATAACTTGTGGTTGCA ATGGGTATTTCTCGTGATTCTATGCACAAGAGGCGTGCCACAGGAGGCAAGAAGAAAGCCTGGAGGAAGAAGAGAAAGTATGAGCTCGGCAGGCAACCTGCCAACACCAAGATATCCAGTGATAAATCAATCCGGAGGATTAGAGTTCGTGGGGGAAATGTGAAGTGGCGAGCTTTTAGGCTTGATACTGGAAACTACTCTTGGGGTAGTGAGGCTGTGACTAGAAAGTCCCGTATTCTTGATGTGGTCTACAATGCATCTAATAATGAGCTTGTTCGTACTCAAACTTTGGTGAAGAGTGCCATCGTTCAAGTTGATGCAGCACCATTTAAACAGTGGTATCTTCAGCATTATGGAGTGGATATTGGACGTAAGAAGAAGACCACAGCATCTTCTAAGAAGGAAGAGGAAGCTGATGCTGCCACTGAGGAGGTAAAGAAGAGTAACCACGTGCAGCGCAAAATAGAGAAACGTCAGCAGGACCGTAAGCTTGACCCACACATCGAAGAACAATTCAGCAGTGGTCGTTTGATGGCGTGTATCTCATCAAGACCTGGTCAATGTGGCCGAGCAGATGGATATATTTTGGAAGGCAAGGAACTTGAATTTTACATGAAGAAGCTCCAAAGGAAGAAGGGTAAAGGAGCTGGTGCTTCATAG MGISRDSMHKRRATGGKKKAWRKKRKYELGRQPANTKISSDKSIRRIRVRGGNVKWRAFRLDTGNYSWGSEAVTRKSRILDVVYNASNNELVRTQTLVKSAIVQVDAAPFKQWYLQHYGVDIGRKKKTTASSKKEEEADAATEEVKKSNHVQRKIEKRQQDRKLDPHIEEQFSSGRLMACISSRPGQCGRADGYILEGKELEFYMKKLQRKKGKGAGAS
BLAST of Cp4.1LG07g07310.1 vs. Swiss-Prot
Match: RS8_ORYSJ (40S ribosomal protein S8 OS=Oryza sativa subsp. japonica GN=RPS8 PE=2 SV=2) HSP 1 Score: 374.0 bits (959), Expect = 1.1e-102 Identity = 191/220 (86.82%), Postives = 203/220 (92.27%), Query Frame = 1
BLAST of Cp4.1LG07g07310.1 vs. Swiss-Prot
Match: RS8_MAIZE (40S ribosomal protein S8 OS=Zea mays GN=RPS8 PE=2 SV=2) HSP 1 Score: 371.3 bits (952), Expect = 7.2e-102 Identity = 189/221 (85.52%), Postives = 204/221 (92.31%), Query Frame = 1
BLAST of Cp4.1LG07g07310.1 vs. Swiss-Prot
Match: RS8_PRUAR (40S ribosomal protein S8 OS=Prunus armeniaca GN=RPS8 PE=2 SV=1) HSP 1 Score: 369.0 bits (946), Expect = 3.6e-101 Identity = 188/220 (85.45%), Postives = 203/220 (92.27%), Query Frame = 1
BLAST of Cp4.1LG07g07310.1 vs. Swiss-Prot
Match: RS81_ARATH (40S ribosomal protein S8-1 OS=Arabidopsis thaliana GN=RPS8A PE=2 SV=1) HSP 1 Score: 357.8 bits (917), Expect = 8.2e-98 Identity = 180/221 (81.45%), Postives = 202/221 (91.40%), Query Frame = 1
BLAST of Cp4.1LG07g07310.1 vs. Swiss-Prot
Match: RS82_ARATH (40S ribosomal protein S8-2 OS=Arabidopsis thaliana GN=RPS8B PE=2 SV=1) HSP 1 Score: 355.5 bits (911), Expect = 4.1e-97 Identity = 182/219 (83.11%), Postives = 197/219 (89.95%), Query Frame = 1
BLAST of Cp4.1LG07g07310.1 vs. TrEMBL
Match: A0A0A0LJA0_CUCSA (40S ribosomal protein S8 OS=Cucumis sativus GN=Csa_2G059750 PE=3 SV=1) HSP 1 Score: 413.7 bits (1062), Expect = 1.4e-112 Identity = 210/219 (95.89%), Postives = 215/219 (98.17%), Query Frame = 1
BLAST of Cp4.1LG07g07310.1 vs. TrEMBL
Match: A0A0A0KFT0_CUCSA (40S ribosomal protein S8 OS=Cucumis sativus GN=Csa_6G382970 PE=3 SV=1) HSP 1 Score: 403.7 bits (1036), Expect = 1.5e-109 Identity = 206/222 (92.79%), Postives = 215/222 (96.85%), Query Frame = 1
BLAST of Cp4.1LG07g07310.1 vs. TrEMBL
Match: A0A067KSQ5_JATCU (40S ribosomal protein S8 OS=Jatropha curcas GN=JCGZ_00973 PE=3 SV=1) HSP 1 Score: 392.5 bits (1007), Expect = 3.4e-106 Identity = 197/219 (89.95%), Postives = 209/219 (95.43%), Query Frame = 1
BLAST of Cp4.1LG07g07310.1 vs. TrEMBL
Match: B9SSR3_RICCO (40S ribosomal protein S8 OS=Ricinus communis GN=RCOM_0046320 PE=3 SV=1) HSP 1 Score: 392.1 bits (1006), Expect = 4.4e-106 Identity = 197/219 (89.95%), Postives = 210/219 (95.89%), Query Frame = 1
BLAST of Cp4.1LG07g07310.1 vs. TrEMBL
Match: A0A0D2VFW2_GOSRA (40S ribosomal protein S8 OS=Gossypium raimondii GN=B456_013G156600 PE=3 SV=1) HSP 1 Score: 386.7 bits (992), Expect = 1.8e-104 Identity = 192/216 (88.89%), Postives = 207/216 (95.83%), Query Frame = 1
BLAST of Cp4.1LG07g07310.1 vs. TAIR10
Match: AT5G20290.1 (AT5G20290.1 Ribosomal protein S8e family protein) HSP 1 Score: 357.8 bits (917), Expect = 4.6e-99 Identity = 180/221 (81.45%), Postives = 202/221 (91.40%), Query Frame = 1
BLAST of Cp4.1LG07g07310.1 vs. TAIR10
Match: AT5G59240.1 (AT5G59240.1 Ribosomal protein S8e family protein) HSP 1 Score: 355.5 bits (911), Expect = 2.3e-98 Identity = 182/219 (83.11%), Postives = 197/219 (89.95%), Query Frame = 1
BLAST of Cp4.1LG07g07310.1 vs. NCBI nr
Match: gi|659069757|ref|XP_008451649.1| (PREDICTED: 40S ribosomal protein S8-like [Cucumis melo]) HSP 1 Score: 415.6 bits (1067), Expect = 5.3e-113 Identity = 211/219 (96.35%), Postives = 216/219 (98.63%), Query Frame = 1
BLAST of Cp4.1LG07g07310.1 vs. NCBI nr
Match: gi|449461203|ref|XP_004148331.1| (PREDICTED: 40S ribosomal protein S8 [Cucumis sativus]) HSP 1 Score: 413.7 bits (1062), Expect = 2.0e-112 Identity = 210/219 (95.89%), Postives = 215/219 (98.17%), Query Frame = 1
BLAST of Cp4.1LG07g07310.1 vs. NCBI nr
Match: gi|659133447|ref|XP_008466734.1| (PREDICTED: 40S ribosomal protein S8-2 [Cucumis melo]) HSP 1 Score: 406.4 bits (1043), Expect = 3.2e-110 Identity = 208/220 (94.55%), Postives = 215/220 (97.73%), Query Frame = 1
BLAST of Cp4.1LG07g07310.1 vs. NCBI nr
Match: gi|449464166|ref|XP_004149800.1| (PREDICTED: 40S ribosomal protein S8 [Cucumis sativus]) HSP 1 Score: 403.7 bits (1036), Expect = 2.1e-109 Identity = 206/222 (92.79%), Postives = 215/222 (96.85%), Query Frame = 1
BLAST of Cp4.1LG07g07310.1 vs. NCBI nr
Match: gi|802588536|ref|XP_012070941.1| (PREDICTED: 40S ribosomal protein S8 [Jatropha curcas]) HSP 1 Score: 392.5 bits (1007), Expect = 4.8e-106 Identity = 197/219 (89.95%), Postives = 209/219 (95.43%), Query Frame = 1
The following BLAST results are available for this feature:
The following terms have been associated with this mRNA:
GO Assignments
This mRNA is annotated with the following GO terms.
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following five_prime_UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following three_prime_UTR feature(s) are a part of this mRNA:
Analysis Name: InterPro Annotations of Cucurbita pepo
Date Performed: 2017-12-02
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