Cp4.1LG07g07310 (gene) Cucurbita pepo (Zucchini)

Overview
NameCp4.1LG07g07310
Typegene
OrganismCucurbita pepo (Cucurbita pepo (Zucchini))
Description40S ribosomal protein S8
LocationCp4.1LG07 : 6337717 .. 6340801 (+)
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
AAGAACAGAGTGAACCCAAACCGAAGGCTAATTAAACCTAACCCACGCCGCATCAAAACCCCTCTCAATCTCTCTTCCGTCTCTCTCTCTCTCGGCTTCTCTCGGTCGCTCAAGGTTTGTTCGTGATTGAATGCCTTTTGTTCTTTTCAAGTTTTTTATTGGATTTCTGTTGTTGCAATCACAATTGGATGTTTGTTTTGCTCCGTCTCTCATTCTCACTGTTTTAGAATGTTGTTTCAATGTTAAATATTGGAGATTTATTAGTAATCGGTGTCATTTGATGGTTATTATCGCTGCTTCGTTTTAATACCGATGCGATTTTAGGTAATTTGGTGTTTAGTACTTTGTCCAGACTGAGAATGGTGGTTTTGGCGAATGCCTGGTTTAATTCTTCTGTTTTTGACATTCTGGATACTCTTTGCAATTGTTCATTTTCCTTATTGATTTCCAGCTTTAGACTGGTTCTAGGATTATCAACTTTCCAGAGATCTGATTAGTTTCTCCTTAGCTTTTGTTCGTTTGGTTATATTATCGGAGGTTATTATTCTGAAGATGTAAGAACTTTTATAACTTCCGAGGTAACTACTAATTTGATGGTCTTAATGAAGTTTGGAACTTTTTAAGTTTGGTAATAGTTATTAGTGACCTCTGGTGTTTCTGATATTTGGAGCTTTAAGAGAAGGTTTACTGTCATGTGTGGGTTTGATTTTGGGTTGGGTTGGGTTGGGACATCGGTTTGCTATAAACGGTTCGATCATGTTTATATTCCCAGACGAATCTAATCTAACCTGTGTAAAGCCTTAGTAATCAATGAAAGCATTCTTGCCCCAATGTAACAAAGACCTCTTATACTGTAGAACTAAACCCGACAAAATATTTGGCCAATCTAAGAATATAGATTATGAAATGAAAAATATATGGAGGTCTATAGCCTCTTCAGGAAATCTACTTTTGTCCTCAAATCTGAACTCATCTCATATAGATTTTCCCCGCTCTTTATATCTTTCTTGTTTTCCTTGGAAGTGTGGGGTTTTAGGGTTTGAGAGCTATTTGATGTTTGTTTCAGGAACCCTAGACAGCTTTTGTCCTCAAATCTGAACTCATCTCATATAGATTTGCCAAGATGGGTATGTTAAACACAACTTTCCTCATTGTTCTACATATCTCAATTTTTCGTTGTTTCTTTTTATTAATCTTGGAGGACTTTTTGTTGTTAGGTATTTCTCGTGATTCTATGCACAAGAGGCGTGCCACAGGAGGCAAGAAGAAAGCCTGGAGGAAGAAGAGAAAGTAATTACTACTTCTATTCAGCTGAGTGCAATTTGTATCAGTTTTTGCTTTCATTGCATTTTTTGCCAACTGATCAACAAAAATTTTGTACTTTTCTTTCTATTCTTGGTTTTTGCGGTGATTTGTAGGTTTAGCTGAGATATTTATTATTATTATTATTGTGGATAACTGGTGAAGTAAGTGGTGGCAAGAGTTTGTTGTTTGTTATCTTTTTCAATATATATTTCAATAATCTCGATTAATCTGCATTATTTATCTAATCTCCTCTGGTTGATTTTTGTATATTTCTGTTCTAAATAAATTGCTCGTCCCATGTTACATTTTCACATTTGTTTAATGAACAGCATAATTTCTCCTATTGATGTAGAAACCTAGTTTCTTTGAATATTTGTGCTGTGTTACAGTTTGATGTTTTACAATGTAAAAGTTGAAATGTTTCCTTCTGTAAGTTATATTTATTATGCTTTGGTACTGAAAGTTCAACCATCACAGAAAAATTTATGTCGATTCAAGGTACAACTTTCATTTTCTCTTCATGTTTGCAGTCCTTTTGATATTGCATCTTTCCCTTTGTTTGTAAAGGTATGAGCTCGGCAGGCAACCTGCCAACACCAAGATATCCAGTGATAAATCAATCCGGAGGATTAGAGTTCGTGGGGGAAATGTGAAGTGGCGAGCTTTTAGGCTTGATACTGGAAACTACTCTTGGGGTAGTGAGGCTGTGACTAGAAAGTCCCGTATTCTTGATGTGGTCTACAATGCATCTAATAATGAGCTTGTTCGTACTCAAACTTTGGTGAAGAGTGCCATCGTTCAAGTTGATGCAGCACCATTTAAACAGTGGTATCTTCAGCATTATGGAGTGGATATTGGACGTAAGAAGAAGACCACAGCATCTTCTAAGAAGGAAGAGGTAGAGCAACACTTGATCCAAAATACAACCTAATTTTGATGGATAATTATGACATTCTTAATATTTATGATACAAAACTTGTTCCAAAATACAACTTAATTTTAATGGTTTATAGGAAGCTGATGCTGCCACTGAGGAGGTAAAGAAGAGTAACCACGTGCAGCGCAAAATAGAGAAACGTCAGCAGGACCGTAAGCTTGACCCACACATCGAAGAACAATTCAGCAGTGGTCGTTTGATGGCGTGTATCTCATCAAGACCTGGTCAATGTGGCCGAGCAGATGGGTAAGCATTATGAATCTCATAACGATTCTTGATTCTCTTGTGTTCTTTCAAACACGTTGAGCAAAATCATTGAACGTGGAGAAGAGTTTTTGGTTTATGTTGCCTGAGGCCTTGCAAATTTTTGACAGATATATTTTGGAAGGCAAGGAACTTGAATTTTACATGAAGAAGCTCCAAAGGAAGAAGGGTAAAGGAGCTGGTGCTTCATAGATTTTGTTGTCGAGTTCTTTTCGGCTCGAGTTTCTTGTTCCTAATTCTTCGTAGGACGCCAATGATTGCAGCTGAGATGAAACTGCTATTTTGGAACTTCAGTTTTGCTGGTAATAGTTTAATTACAATACCTAGCGATTTTCATGTTAACAACAGTTTGTTTATTAGCTTTAAAAGCTTTAAAGTTTAATTGTTTCCCAGTCTATCGTCTCTCCAATTCCCTTCCATTCCTTTCGACGCTTTTCAATTGATGATCACAGTAGTTTTTTATTCGGTTTCAATTGTATGCATGGACTTGGAAATTGTGCATAAAGAAAGAATTTATGACTAATTTGTTTTTAATTCAAAAGTGAATGTATGATATAAGCCCTATAACTTGTGGTTGCA

mRNA sequence

AAGAACAGAGTGAACCCAAACCGAAGGCTAATTAAACCTAACCCACGCCGCATCAAAACCCCTCTCAATCTCTCTTCCGTCTCTCTCTCTCTCGGCTTCTCTCGGTCGCTCAAGGAACCCTAGACAGCTTTTGTCCTCAAATCTGAACTCATCTCATATAGATTTGCCAAGATGGGTATTTCTCGTGATTCTATGCACAAGAGGCGTGCCACAGGAGGCAAGAAGAAAGCCTGGAGGAAGAAGAGAAAGTATGAGCTCGGCAGGCAACCTGCCAACACCAAGATATCCAGTGATAAATCAATCCGGAGGATTAGAGTTCGTGGGGGAAATGTGAAGTGGCGAGCTTTTAGGCTTGATACTGGAAACTACTCTTGGGGTAGTGAGGCTGTGACTAGAAAGTCCCGTATTCTTGATGTGGTCTACAATGCATCTAATAATGAGCTTGTTCGTACTCAAACTTTGGTGAAGAGTGCCATCGTTCAAGTTGATGCAGCACCATTTAAACAGTGGTATCTTCAGCATTATGGAGTGGATATTGGACGTAAGAAGAAGACCACAGCATCTTCTAAGAAGGAAGAGGAAGCTGATGCTGCCACTGAGGAGGTAAAGAAGAGTAACCACGTGCAGCGCAAAATAGAGAAACGTCAGCAGGACCGTAAGCTTGACCCACACATCGAAGAACAATTCAGCAGTGGTCGTTTGATGGCGTGTATCTCATCAAGACCTGGTCAATGTGGCCGAGCAGATGGATATATTTTGGAAGGCAAGGAACTTGAATTTTACATGAAGAAGCTCCAAAGGAAGAAGGGTAAAGGAGCTGGTGCTTCATAGATTTTGTTGTCGAGTTCTTTTCGGCTCGAGTTTCTTGTTCCTAATTCTTCGTAGGACGCCAATGATTGCAGCTGAGATGAAACTGCTATTTTGGAACTTCAGTTTTGCTGGTAATAGTTTAATTACAATACCTAGCGATTTTCATGTTAACAACAGTTTGTTTATTAGCTTTAAAAGCTTTAAAGTTTAATTGTTTCCCAGTCTATCGTCTCTCCAATTCCCTTCCATTCCTTTCGACGCTTTTCAATTGATGATCACAGTAGTTTTTTATTCGGTTTCAATTGTATGCATGGACTTGGAAATTGTGCATAAAGAAAGAATTTATGACTAATTTGTTTTTAATTCAAAAGTGAATGTATGATATAAGCCCTATAACTTGTGGTTGCA

Coding sequence (CDS)

ATGGGTATTTCTCGTGATTCTATGCACAAGAGGCGTGCCACAGGAGGCAAGAAGAAAGCCTGGAGGAAGAAGAGAAAGTATGAGCTCGGCAGGCAACCTGCCAACACCAAGATATCCAGTGATAAATCAATCCGGAGGATTAGAGTTCGTGGGGGAAATGTGAAGTGGCGAGCTTTTAGGCTTGATACTGGAAACTACTCTTGGGGTAGTGAGGCTGTGACTAGAAAGTCCCGTATTCTTGATGTGGTCTACAATGCATCTAATAATGAGCTTGTTCGTACTCAAACTTTGGTGAAGAGTGCCATCGTTCAAGTTGATGCAGCACCATTTAAACAGTGGTATCTTCAGCATTATGGAGTGGATATTGGACGTAAGAAGAAGACCACAGCATCTTCTAAGAAGGAAGAGGAAGCTGATGCTGCCACTGAGGAGGTAAAGAAGAGTAACCACGTGCAGCGCAAAATAGAGAAACGTCAGCAGGACCGTAAGCTTGACCCACACATCGAAGAACAATTCAGCAGTGGTCGTTTGATGGCGTGTATCTCATCAAGACCTGGTCAATGTGGCCGAGCAGATGGATATATTTTGGAAGGCAAGGAACTTGAATTTTACATGAAGAAGCTCCAAAGGAAGAAGGGTAAAGGAGCTGGTGCTTCATAG

Protein sequence

MGISRDSMHKRRATGGKKKAWRKKRKYELGRQPANTKISSDKSIRRIRVRGGNVKWRAFRLDTGNYSWGSEAVTRKSRILDVVYNASNNELVRTQTLVKSAIVQVDAAPFKQWYLQHYGVDIGRKKKTTASSKKEEEADAATEEVKKSNHVQRKIEKRQQDRKLDPHIEEQFSSGRLMACISSRPGQCGRADGYILEGKELEFYMKKLQRKKGKGAGAS
Homology
[Close]
BLAST of Cp4.1LG07g07310 vs. Swiss-Prot
Match: RS8_ORYSJ (40S ribosomal protein S8 OS=Oryza sativa subsp. japonica GN=RPS8 PE=2 SV=2)

HSP 1 Score: 374.0 bits (959), Expect = 1.1e-102
Identity = 191/220 (86.82%), Postives = 203/220 (92.27%), Query Frame = 1 

Query: 1   MGISRDSMHKRRATGGKKKAWRKKRKYELGRQPANTKISSDKSIRRIRVRGGNVKWRAFR 60
           MGISRDSMHKRRATGGK+KAWRKKRKYELGRQPANTK+SS+K++RR+RVRGGNVKWRA R
Sbjct: 1   MGISRDSMHKRRATGGKQKAWRKKRKYELGRQPANTKLSSNKTVRRVRVRGGNVKWRALR 60

Query: 61  LDTGNYSWGSEAVTRKSRILDVVYNASNNELVRTQTLVKSAIVQVDAAPFKQWYLQHYGV 120
           LDTGNYSWGSEAVTRK+RILDVVYNASNNELVRTQTLVKSAIVQVDAAPFKQWYL HYGV
Sbjct: 61  LDTGNYSWGSEAVTRKTRILDVVYNASNNELVRTQTLVKSAIVQVDAAPFKQWYLTHYGV 120

Query: 121 DIGRKKKTTASSKKEE--EADAATEEVKKSNHVQRKIEKRQQDRKLDPHIEEQFSSGRLM 180
           DIGRKKK  A+ K  E  +A+A TEE KKSNHV RK+EKRQQ R LD HIEEQF SGRL+
Sbjct: 121 DIGRKKKAPAAKKDAEGQDAEATTEEAKKSNHVVRKLEKRQQGRTLDAHIEEQFGSGRLL 180

Query: 181 ACISSRPGQCGRADGYILEGKELEFYMKKLQRKKGKGAGA 219
           ACISSRPGQCGRADGYILEGKELEFYMKKLQRKKGKGA A
Sbjct: 181 ACISSRPGQCGRADGYILEGKELEFYMKKLQRKKGKGASA 220

[Close]
BLAST of Cp4.1LG07g07310 vs. Swiss-Prot
Match: RS8_MAIZE (40S ribosomal protein S8 OS=Zea mays GN=RPS8 PE=2 SV=2)

HSP 1 Score: 371.3 bits (952), Expect = 7.2e-102
Identity = 189/221 (85.52%), Postives = 204/221 (92.31%), Query Frame = 1 

Query: 1   MGISRDSMHKRRATGGKKKAWRKKRKYELGRQPANTKISSDKSIRRIRVRGGNVKWRAFR 60
           MGISRDSMHKRRATGGK+KAWRKKRKYELGRQPANTK+SS+K++RR+RVRGGNVKWRA R
Sbjct: 1   MGISRDSMHKRRATGGKQKAWRKKRKYELGRQPANTKLSSNKTVRRVRVRGGNVKWRALR 60

Query: 61  LDTGNYSWGSEAVTRKSRILDVVYNASNNELVRTQTLVKSAIVQVDAAPFKQWYLQHYGV 120
           LDTGNYSWGSEAVTRK+RILDVVYNASNNELVRTQTLVKSAIVQVDAAPFKQWYL HYGV
Sbjct: 61  LDTGNYSWGSEAVTRKTRILDVVYNASNNELVRTQTLVKSAIVQVDAAPFKQWYLTHYGV 120

Query: 121 DIGRKKKTTASSK---KEEEADAATEEVKKSNHVQRKIEKRQQDRKLDPHIEEQFSSGRL 180
           DIGRKKKT A+ K   + +E +AA EE KKSNHV RK+EKR++ R LDPHIEEQF SGRL
Sbjct: 121 DIGRKKKTPAAKKDNAEGQEVEAAAEETKKSNHVTRKLEKRKEGRTLDPHIEEQFGSGRL 180

Query: 181 MACISSRPGQCGRADGYILEGKELEFYMKKLQRKKGKGAGA 219
           +ACISSRPGQCGRADGYILEGKELEFYMKKLQRKKGK A A
Sbjct: 181 LACISSRPGQCGRADGYILEGKELEFYMKKLQRKKGKSAVA 221

[Close]
BLAST of Cp4.1LG07g07310 vs. Swiss-Prot
Match: RS8_PRUAR (40S ribosomal protein S8 OS=Prunus armeniaca GN=RPS8 PE=2 SV=1)

HSP 1 Score: 369.0 bits (946), Expect = 3.6e-101
Identity = 188/220 (85.45%), Postives = 203/220 (92.27%), Query Frame = 1 

Query: 1   MGISRDSMHKRRATGGKKKAWRKKRKYELGRQPANTKISSDKSIRRIRVRGGNVKWRAFR 60
           MGISRDSMHKRRATGGKKKAWRKKRKYELGRQPANTK+SS+K++RRIRVRGGNVKWRA R
Sbjct: 1   MGISRDSMHKRRATGGKKKAWRKKRKYELGRQPANTKLSSNKTVRRIRVRGGNVKWRALR 60

Query: 61  LDTGNYSWGSEAVTRKSRILDVVYNASNNELVRTQTLVKSAIVQVDAAPFKQWYLQHYGV 120
           LDTGN+SWGSEAVTRK+R+LDVVYNASNNELVRTQTLVKSAIVQVDAAPFKQWYLQHYGV
Sbjct: 61  LDTGNFSWGSEAVTRKTRLLDVVYNASNNELVRTQTLVKSAIVQVDAAPFKQWYLQHYGV 120

Query: 121 DIGRKKKTTASSK-KEEEADAATEEVKKSNHVQRKIEKRQQDRKLDPHIEEQFSSGRLMA 180
           +IGRKKKT A+ K   EE +A TEE KKSNHV  K+EKRQQ R LD HIEEQF  G+L+A
Sbjct: 121 EIGRKKKTAAAKKDTPEEGEATTEEAKKSNHVAIKLEKRQQGRTLDAHIEEQFGGGKLLA 180

Query: 181 CISSRPGQCGRADGYILEGKELEFYMKKLQRKKGKGAGAS 220
           CISSRPGQCG+ADG ILEGKELEFYMKKLQRKKGKGAGA+
Sbjct: 181 CISSRPGQCGKADGDILEGKELEFYMKKLQRKKGKGAGAA 220

[Close]
BLAST of Cp4.1LG07g07310 vs. Swiss-Prot
Match: RS81_ARATH (40S ribosomal protein S8-1 OS=Arabidopsis thaliana GN=RPS8A PE=2 SV=1)

HSP 1 Score: 357.8 bits (917), Expect = 8.2e-98
Identity = 180/221 (81.45%), Postives = 202/221 (91.40%), Query Frame = 1 

Query: 1   MGISRDSMHKRRATGGKKKAWRKKRKYELGRQPANTKISSDKSIRRIRVRGGNVKWRAFR 60
           MGISRDS+HKRRATGGK+K WRKKRKYE+GRQPANTK+SS+K++RRIRVRGGNVKWRA R
Sbjct: 1   MGISRDSIHKRRATGGKQKQWRKKRKYEMGRQPANTKLSSNKTVRRIRVRGGNVKWRALR 60

Query: 61  LDTGNYSWGSEAVTRKSRILDVVYNASNNELVRTQTLVKSAIVQVDAAPFKQWYLQHYGV 120
           LDTGNYSWGSEA TRK+R+LDVVYNASNNELVRT+TLVKSAIVQVDAAPFKQWYL HYGV
Sbjct: 61  LDTGNYSWGSEATTRKTRVLDVVYNASNNELVRTKTLVKSAIVQVDAAPFKQWYLSHYGV 120

Query: 121 DIGRKKKTTASSKK-----EEEADAATEEVKKSNHVQRKIEKRQQDRKLDPHIEEQFSSG 180
           ++GRKKK+ +S+KK     EE A AA EEVKKSNH+ RKI  RQ+ R LD HIE+QF+SG
Sbjct: 121 ELGRKKKSASSTKKDGEEGEEAAVAAPEEVKKSNHLLRKIASRQEGRSLDSHIEDQFASG 180

Query: 181 RLMACISSRPGQCGRADGYILEGKELEFYMKKLQRKKGKGA 217
           RL+ACISSRPGQCGRADGYILEGKELEFYMKK+Q+KKGKGA
Sbjct: 181 RLLACISSRPGQCGRADGYILEGKELEFYMKKIQKKKGKGA 221

[Close]
BLAST of Cp4.1LG07g07310 vs. Swiss-Prot
Match: RS82_ARATH (40S ribosomal protein S8-2 OS=Arabidopsis thaliana GN=RPS8B PE=2 SV=1)

HSP 1 Score: 355.5 bits (911), Expect = 4.1e-97
Identity = 182/219 (83.11%), Postives = 197/219 (89.95%), Query Frame = 1 

Query: 1   MGISRDSMHKRRATGGKKKAWRKKRKYELGRQPANTKISSDKSIRRIRVRGGNVKWRAFR 60
           MGISRDS+HKRRATGGK+K WRKKRKYELGRQPANTK+SS+K++RRIRVRGGNVKWRA R
Sbjct: 1   MGISRDSIHKRRATGGKQKMWRKKRKYELGRQPANTKLSSNKTVRRIRVRGGNVKWRALR 60

Query: 61  LDTGNYSWGSEAVTRKSRILDVVYNASNNELVRTQTLVKSAIVQVDAAPFKQWYLQHYGV 120
           LDTGN+SWGSEAVTRK+RILDV YNASNNELVRTQTLVKSAIVQVDAAPFKQ YLQHYGV
Sbjct: 61  LDTGNFSWGSEAVTRKTRILDVAYNASNNELVRTQTLVKSAIVQVDAAPFKQGYLQHYGV 120

Query: 121 DIGRKKKTTASSKKEEEADAATEEVKKSNHVQRKIEKRQQDRKLDPHIEEQFSSGRLMAC 180
           DIGRKKK  A           TEEVKKSNHVQRK+E RQ+ R LD H+EEQFSSGRL+AC
Sbjct: 121 DIGRKKKGEA---------VTTEEVKKSNHVQRKLEMRQEGRALDSHLEEQFSSGRLLAC 180

Query: 181 ISSRPGQCGRADGYILEGKELEFYMKKLQRKKGKGAGAS 220
           I+SRPGQCGRADGYILEGKELEFYMKKLQ+KKGK AGA+
Sbjct: 181 IASRPGQCGRADGYILEGKELEFYMKKLQKKKGKNAGAA 210

[Close]
BLAST of Cp4.1LG07g07310 vs. TrEMBL
Match: A0A0A0LJA0_CUCSA (40S ribosomal protein S8 OS=Cucumis sativus GN=Csa_2G059750 PE=3 SV=1)

HSP 1 Score: 413.7 bits (1062), Expect = 1.4e-112
Identity = 210/219 (95.89%), Postives = 215/219 (98.17%), Query Frame = 1 

Query: 1   MGISRDSMHKRRATGGKKKAWRKKRKYELGRQPANTKISSDKSIRRIRVRGGNVKWRAFR 60
           MGISRDSMHKRR TGGKKKAWRKKRKYELGRQPANTK+SSDKSIRRIRVRGGNVKWRAFR
Sbjct: 1   MGISRDSMHKRRETGGKKKAWRKKRKYELGRQPANTKLSSDKSIRRIRVRGGNVKWRAFR 60

Query: 61  LDTGNYSWGSEAVTRKSRILDVVYNASNNELVRTQTLVKSAIVQVDAAPFKQWYLQHYGV 120
           LDTGNYSWGSEAVTRK+R+LDVVYNASNNELVRTQTLVKSAIVQVDAAPFKQWYLQHYGV
Sbjct: 61  LDTGNYSWGSEAVTRKTRLLDVVYNASNNELVRTQTLVKSAIVQVDAAPFKQWYLQHYGV 120

Query: 121 DIGRKKKTTASSKKEEEADAATEEVKKSNHVQRKIEKRQQDRKLDPHIEEQFSSGRLMAC 180
           DIGRKKKT+AS KKEEE DA TEEVKKSNHVQRKIEKRQQDRKLDPHIEEQFSSGRLMAC
Sbjct: 121 DIGRKKKTSASVKKEEEGDAGTEEVKKSNHVQRKIEKRQQDRKLDPHIEEQFSSGRLMAC 180

Query: 181 ISSRPGQCGRADGYILEGKELEFYMKKLQRKKGKGAGAS 220
           ISSRPGQCGRADGYILEGKELEFYMKKLQRKKGKGAGA+
Sbjct: 181 ISSRPGQCGRADGYILEGKELEFYMKKLQRKKGKGAGAA 219

[Close]
BLAST of Cp4.1LG07g07310 vs. TrEMBL
Match: A0A0A0KFT0_CUCSA (40S ribosomal protein S8 OS=Cucumis sativus GN=Csa_6G382970 PE=3 SV=1)

HSP 1 Score: 403.7 bits (1036), Expect = 1.5e-109
Identity = 206/222 (92.79%), Postives = 215/222 (96.85%), Query Frame = 1 

Query: 1   MGISRDSMHKRRATGGKKKAWRKKRKYELGRQPANTKISSDKSIRRIRVRGGNVKWRAFR 60
           MGISRDSMHKRRATGGKKKAWRKKRKYELGRQPANTK+SSDKSIRRIRVRGGNVKWRAFR
Sbjct: 1   MGISRDSMHKRRATGGKKKAWRKKRKYELGRQPANTKLSSDKSIRRIRVRGGNVKWRAFR 60

Query: 61  LDTGNYSWGSEAVTRKSRILDVVYNASNNELVRTQTLVKSAIVQVDAAPFKQWYLQHYGV 120
           LDTGNYSWGSEAV+RK+RILDVVYNASNNELVRTQTLVKSA+VQVDAAPFKQWYLQHYGV
Sbjct: 61  LDTGNYSWGSEAVSRKTRILDVVYNASNNELVRTQTLVKSAVVQVDAAPFKQWYLQHYGV 120

Query: 121 DIGRKKKTTASSKKEEEAD---AATEEVKKSNHVQRKIEKRQQDRKLDPHIEEQFSSGRL 180
           DIGRKKKT AS+KK+EE D   AA EEVKKSNHVQRK+EKRQ+ RKLDPHIEEQFSSGRL
Sbjct: 121 DIGRKKKTAASAKKDEEGDAAAAAAEEVKKSNHVQRKLEKRQEGRKLDPHIEEQFSSGRL 180

Query: 181 MACISSRPGQCGRADGYILEGKELEFYMKKLQRKKGKGAGAS 220
           MACISSRPGQCGRADGYILEGKELEFYMKKLQRKKGKGAGA+
Sbjct: 181 MACISSRPGQCGRADGYILEGKELEFYMKKLQRKKGKGAGAA 222

[Close]
BLAST of Cp4.1LG07g07310 vs. TrEMBL
Match: A0A067KSQ5_JATCU (40S ribosomal protein S8 OS=Jatropha curcas GN=JCGZ_00973 PE=3 SV=1)

HSP 1 Score: 392.5 bits (1007), Expect = 3.4e-106
Identity = 197/219 (89.95%), Postives = 209/219 (95.43%), Query Frame = 1 

Query: 1   MGISRDSMHKRRATGGKKKAWRKKRKYELGRQPANTKISSDKSIRRIRVRGGNVKWRAFR 60
           MGISRDSMHKRRATGGKKKAWRKKRKYELGRQPANTK+SS+K++RRIRVRGGNVKWRA R
Sbjct: 1   MGISRDSMHKRRATGGKKKAWRKKRKYELGRQPANTKLSSNKTVRRIRVRGGNVKWRALR 60

Query: 61  LDTGNYSWGSEAVTRKSRILDVVYNASNNELVRTQTLVKSAIVQVDAAPFKQWYLQHYGV 120
           LDTGNYSWGSEAVTRK+RILDVVYNASNNELVRTQTLVKSAIVQVDAAPFKQWYLQHYGV
Sbjct: 61  LDTGNYSWGSEAVTRKTRILDVVYNASNNELVRTQTLVKSAIVQVDAAPFKQWYLQHYGV 120

Query: 121 DIGRKKKTTASSKKEEEADAATEEVKKSNHVQRKIEKRQQDRKLDPHIEEQFSSGRLMAC 180
           DIGRKKK  A+ K+ EE + ATEEVKKSNHV RK+EKRQQ RKLDPHIEEQF+ GRLMAC
Sbjct: 121 DIGRKKKVAATKKEGEEGEGATEEVKKSNHVLRKLEKRQQTRKLDPHIEEQFAGGRLMAC 180

Query: 181 ISSRPGQCGRADGYILEGKELEFYMKKLQRKKGKGAGAS 220
           ISSRPGQCGRADGYILEGKELEFYMKK+QRKKGKGAGA+
Sbjct: 181 ISSRPGQCGRADGYILEGKELEFYMKKIQRKKGKGAGAA 219

[Close]
BLAST of Cp4.1LG07g07310 vs. TrEMBL
Match: B9SSR3_RICCO (40S ribosomal protein S8 OS=Ricinus communis GN=RCOM_0046320 PE=3 SV=1)

HSP 1 Score: 392.1 bits (1006), Expect = 4.4e-106
Identity = 197/219 (89.95%), Postives = 210/219 (95.89%), Query Frame = 1 

Query: 1   MGISRDSMHKRRATGGKKKAWRKKRKYELGRQPANTKISSDKSIRRIRVRGGNVKWRAFR 60
           MGISRDSMHKRRATGGKKKAWRKKRKYELGRQPA+TK+SS+K++RRIRVRGGNVKWRA R
Sbjct: 1   MGISRDSMHKRRATGGKKKAWRKKRKYELGRQPASTKLSSNKTVRRIRVRGGNVKWRALR 60

Query: 61  LDTGNYSWGSEAVTRKSRILDVVYNASNNELVRTQTLVKSAIVQVDAAPFKQWYLQHYGV 120
           LDTGNYSWGSEAVTRK+RILDVVYNASNNELVRTQTLVKSAI+QVDAAPFKQWYLQHYGV
Sbjct: 61  LDTGNYSWGSEAVTRKTRILDVVYNASNNELVRTQTLVKSAIIQVDAAPFKQWYLQHYGV 120

Query: 121 DIGRKKKTTASSKKEEEADAATEEVKKSNHVQRKIEKRQQDRKLDPHIEEQFSSGRLMAC 180
           DIGRKKKT A+ K+ EE +AATEEVKKSNHV RK+EKRQQ RKLDPHIEEQF  GRL+AC
Sbjct: 121 DIGRKKKTAAAKKEGEEGEAATEEVKKSNHVLRKLEKRQQIRKLDPHIEEQFGGGRLLAC 180

Query: 181 ISSRPGQCGRADGYILEGKELEFYMKKLQRKKGKGAGAS 220
           ISSRPGQCGRADGYILEGKELEFYMKKLQRKKGKGAGA+
Sbjct: 181 ISSRPGQCGRADGYILEGKELEFYMKKLQRKKGKGAGAA 219

[Close]
BLAST of Cp4.1LG07g07310 vs. TrEMBL
Match: A0A0D2VFW2_GOSRA (40S ribosomal protein S8 OS=Gossypium raimondii GN=B456_013G156600 PE=3 SV=1)

HSP 1 Score: 386.7 bits (992), Expect = 1.8e-104
Identity = 192/216 (88.89%), Postives = 207/216 (95.83%), Query Frame = 1 

Query: 1   MGISRDSMHKRRATGGKKKAWRKKRKYELGRQPANTKISSDKSIRRIRVRGGNVKWRAFR 60
           MGISRDSMHKRRATGGKKKAWRKKRKYELGRQPANTK+SS+K++RRIRVRGGNVKWRA R
Sbjct: 1   MGISRDSMHKRRATGGKKKAWRKKRKYELGRQPANTKLSSNKTVRRIRVRGGNVKWRALR 60

Query: 61  LDTGNYSWGSEAVTRKSRILDVVYNASNNELVRTQTLVKSAIVQVDAAPFKQWYLQHYGV 120
           LDTGNYSWGSEAVTRK+RILDVVYNASNNELVRTQTLVKSAIVQVDAAPFKQWYLQHYG+
Sbjct: 61  LDTGNYSWGSEAVTRKTRILDVVYNASNNELVRTQTLVKSAIVQVDAAPFKQWYLQHYGI 120

Query: 121 DIGRKKKTTASSKKEEEADAATEEVKKSNHVQRKIEKRQQDRKLDPHIEEQFSSGRLMAC 180
           DIGRKKK+ A+ K+ EE + ATEEVKKSNH+ RK+EKRQQ+R LDPHIEEQF SGRL+AC
Sbjct: 121 DIGRKKKSAAAKKEGEEGETATEEVKKSNHILRKLEKRQQNRALDPHIEEQFGSGRLLAC 180

Query: 181 ISSRPGQCGRADGYILEGKELEFYMKKLQRKKGKGA 217
           ISSRPGQCGRADGYILEGKELEFYMKK+QRKKGKGA
Sbjct: 181 ISSRPGQCGRADGYILEGKELEFYMKKIQRKKGKGA 216

[Close]
BLAST of Cp4.1LG07g07310 vs. TAIR10
Match: AT5G20290.1 (AT5G20290.1 Ribosomal protein S8e family protein)

HSP 1 Score: 357.8 bits (917), Expect = 4.6e-99
Identity = 180/221 (81.45%), Postives = 202/221 (91.40%), Query Frame = 1 

Query: 1   MGISRDSMHKRRATGGKKKAWRKKRKYELGRQPANTKISSDKSIRRIRVRGGNVKWRAFR 60
           MGISRDS+HKRRATGGK+K WRKKRKYE+GRQPANTK+SS+K++RRIRVRGGNVKWRA R
Sbjct: 1   MGISRDSIHKRRATGGKQKQWRKKRKYEMGRQPANTKLSSNKTVRRIRVRGGNVKWRALR 60

Query: 61  LDTGNYSWGSEAVTRKSRILDVVYNASNNELVRTQTLVKSAIVQVDAAPFKQWYLQHYGV 120
           LDTGNYSWGSEA TRK+R+LDVVYNASNNELVRT+TLVKSAIVQVDAAPFKQWYL HYGV
Sbjct: 61  LDTGNYSWGSEATTRKTRVLDVVYNASNNELVRTKTLVKSAIVQVDAAPFKQWYLSHYGV 120

Query: 121 DIGRKKKTTASSKK-----EEEADAATEEVKKSNHVQRKIEKRQQDRKLDPHIEEQFSSG 180
           ++GRKKK+ +S+KK     EE A AA EEVKKSNH+ RKI  RQ+ R LD HIE+QF+SG
Sbjct: 121 ELGRKKKSASSTKKDGEEGEEAAVAAPEEVKKSNHLLRKIASRQEGRSLDSHIEDQFASG 180

Query: 181 RLMACISSRPGQCGRADGYILEGKELEFYMKKLQRKKGKGA 217
           RL+ACISSRPGQCGRADGYILEGKELEFYMKK+Q+KKGKGA
Sbjct: 181 RLLACISSRPGQCGRADGYILEGKELEFYMKKIQKKKGKGA 221

[Close]
BLAST of Cp4.1LG07g07310 vs. TAIR10
Match: AT5G59240.1 (AT5G59240.1 Ribosomal protein S8e family protein)

HSP 1 Score: 355.5 bits (911), Expect = 2.3e-98
Identity = 182/219 (83.11%), Postives = 197/219 (89.95%), Query Frame = 1 

Query: 1   MGISRDSMHKRRATGGKKKAWRKKRKYELGRQPANTKISSDKSIRRIRVRGGNVKWRAFR 60
           MGISRDS+HKRRATGGK+K WRKKRKYELGRQPANTK+SS+K++RRIRVRGGNVKWRA R
Sbjct: 1   MGISRDSIHKRRATGGKQKMWRKKRKYELGRQPANTKLSSNKTVRRIRVRGGNVKWRALR 60

Query: 61  LDTGNYSWGSEAVTRKSRILDVVYNASNNELVRTQTLVKSAIVQVDAAPFKQWYLQHYGV 120
           LDTGN+SWGSEAVTRK+RILDV YNASNNELVRTQTLVKSAIVQVDAAPFKQ YLQHYGV
Sbjct: 61  LDTGNFSWGSEAVTRKTRILDVAYNASNNELVRTQTLVKSAIVQVDAAPFKQGYLQHYGV 120

Query: 121 DIGRKKKTTASSKKEEEADAATEEVKKSNHVQRKIEKRQQDRKLDPHIEEQFSSGRLMAC 180
           DIGRKKK  A           TEEVKKSNHVQRK+E RQ+ R LD H+EEQFSSGRL+AC
Sbjct: 121 DIGRKKKGEA---------VTTEEVKKSNHVQRKLEMRQEGRALDSHLEEQFSSGRLLAC 180

Query: 181 ISSRPGQCGRADGYILEGKELEFYMKKLQRKKGKGAGAS 220
           I+SRPGQCGRADGYILEGKELEFYMKKLQ+KKGK AGA+
Sbjct: 181 IASRPGQCGRADGYILEGKELEFYMKKLQKKKGKNAGAA 210

[Close]
BLAST of Cp4.1LG07g07310 vs. NCBI nr
Match: gi|659069757|ref|XP_008451649.1| (PREDICTED: 40S ribosomal protein S8-like [Cucumis melo])

HSP 1 Score: 415.6 bits (1067), Expect = 5.3e-113
Identity = 211/219 (96.35%), Postives = 216/219 (98.63%), Query Frame = 1 

Query: 1   MGISRDSMHKRRATGGKKKAWRKKRKYELGRQPANTKISSDKSIRRIRVRGGNVKWRAFR 60
           MGISRDSMHKRR TGGKKKAWRKKRKYELGRQPANTK+SSDKSIRRIRVRGGNVKWRAFR
Sbjct: 1   MGISRDSMHKRRETGGKKKAWRKKRKYELGRQPANTKLSSDKSIRRIRVRGGNVKWRAFR 60

Query: 61  LDTGNYSWGSEAVTRKSRILDVVYNASNNELVRTQTLVKSAIVQVDAAPFKQWYLQHYGV 120
           LDTGNYSWGSEAVTRK+RILDVVYNASNNELVRTQTLVKSAIVQVDAAPFKQWYLQHYGV
Sbjct: 61  LDTGNYSWGSEAVTRKTRILDVVYNASNNELVRTQTLVKSAIVQVDAAPFKQWYLQHYGV 120

Query: 121 DIGRKKKTTASSKKEEEADAATEEVKKSNHVQRKIEKRQQDRKLDPHIEEQFSSGRLMAC 180
           DIGRKKKT+AS+KKEEE DA TEEVKKSNHVQRKIEKRQQDRKLDPHIEEQFSSGRLMAC
Sbjct: 121 DIGRKKKTSASAKKEEEGDAGTEEVKKSNHVQRKIEKRQQDRKLDPHIEEQFSSGRLMAC 180

Query: 181 ISSRPGQCGRADGYILEGKELEFYMKKLQRKKGKGAGAS 220
           ISSRPGQCGRADGYILEGKELEFYMKKLQRKKGKGAGA+
Sbjct: 181 ISSRPGQCGRADGYILEGKELEFYMKKLQRKKGKGAGAA 219

[Close]
BLAST of Cp4.1LG07g07310 vs. NCBI nr
Match: gi|449461203|ref|XP_004148331.1| (PREDICTED: 40S ribosomal protein S8 [Cucumis sativus])

HSP 1 Score: 413.7 bits (1062), Expect = 2.0e-112
Identity = 210/219 (95.89%), Postives = 215/219 (98.17%), Query Frame = 1 

Query: 1   MGISRDSMHKRRATGGKKKAWRKKRKYELGRQPANTKISSDKSIRRIRVRGGNVKWRAFR 60
           MGISRDSMHKRR TGGKKKAWRKKRKYELGRQPANTK+SSDKSIRRIRVRGGNVKWRAFR
Sbjct: 1   MGISRDSMHKRRETGGKKKAWRKKRKYELGRQPANTKLSSDKSIRRIRVRGGNVKWRAFR 60

Query: 61  LDTGNYSWGSEAVTRKSRILDVVYNASNNELVRTQTLVKSAIVQVDAAPFKQWYLQHYGV 120
           LDTGNYSWGSEAVTRK+R+LDVVYNASNNELVRTQTLVKSAIVQVDAAPFKQWYLQHYGV
Sbjct: 61  LDTGNYSWGSEAVTRKTRLLDVVYNASNNELVRTQTLVKSAIVQVDAAPFKQWYLQHYGV 120

Query: 121 DIGRKKKTTASSKKEEEADAATEEVKKSNHVQRKIEKRQQDRKLDPHIEEQFSSGRLMAC 180
           DIGRKKKT+AS KKEEE DA TEEVKKSNHVQRKIEKRQQDRKLDPHIEEQFSSGRLMAC
Sbjct: 121 DIGRKKKTSASVKKEEEGDAGTEEVKKSNHVQRKIEKRQQDRKLDPHIEEQFSSGRLMAC 180

Query: 181 ISSRPGQCGRADGYILEGKELEFYMKKLQRKKGKGAGAS 220
           ISSRPGQCGRADGYILEGKELEFYMKKLQRKKGKGAGA+
Sbjct: 181 ISSRPGQCGRADGYILEGKELEFYMKKLQRKKGKGAGAA 219

[Close]
BLAST of Cp4.1LG07g07310 vs. NCBI nr
Match: gi|659133447|ref|XP_008466734.1| (PREDICTED: 40S ribosomal protein S8-2 [Cucumis melo])

HSP 1 Score: 406.4 bits (1043), Expect = 3.2e-110
Identity = 208/220 (94.55%), Postives = 215/220 (97.73%), Query Frame = 1 

Query: 1   MGISRDSMHKRRATGGKKKAWRKKRKYELGRQPANTKISSDKSIRRIRVRGGNVKWRAFR 60
           MGISRDSMHKRRATGGKKKAWRKKRKYELGRQPANTK+SSDKSIRRIRVRGGNVKWRAFR
Sbjct: 1   MGISRDSMHKRRATGGKKKAWRKKRKYELGRQPANTKLSSDKSIRRIRVRGGNVKWRAFR 60

Query: 61  LDTGNYSWGSEAVTRKSRILDVVYNASNNELVRTQTLVKSAIVQVDAAPFKQWYLQHYGV 120
           LDTGNYSWGSEAVTRK+RILDVVYNASNNELVRTQTLVKSAIVQVDAAPFKQWYLQHYGV
Sbjct: 61  LDTGNYSWGSEAVTRKTRILDVVYNASNNELVRTQTLVKSAIVQVDAAPFKQWYLQHYGV 120

Query: 121 DIGRKKKTTASSKKEEEAD-AATEEVKKSNHVQRKIEKRQQDRKLDPHIEEQFSSGRLMA 180
           DIGRKKKT AS+KK+EE D AA EEVKKSNHVQRK+EKRQ+ RKLDPHIEEQFSSGRLMA
Sbjct: 121 DIGRKKKTAASTKKDEEGDAAAAEEVKKSNHVQRKLEKRQEGRKLDPHIEEQFSSGRLMA 180

Query: 181 CISSRPGQCGRADGYILEGKELEFYMKKLQRKKGKGAGAS 220
           CISSRPGQCGRADGYILEGKELEFYMKKLQRKKGKGAGA+
Sbjct: 181 CISSRPGQCGRADGYILEGKELEFYMKKLQRKKGKGAGAA 220

[Close]
BLAST of Cp4.1LG07g07310 vs. NCBI nr
Match: gi|449464166|ref|XP_004149800.1| (PREDICTED: 40S ribosomal protein S8 [Cucumis sativus])

HSP 1 Score: 403.7 bits (1036), Expect = 2.1e-109
Identity = 206/222 (92.79%), Postives = 215/222 (96.85%), Query Frame = 1 

Query: 1   MGISRDSMHKRRATGGKKKAWRKKRKYELGRQPANTKISSDKSIRRIRVRGGNVKWRAFR 60
           MGISRDSMHKRRATGGKKKAWRKKRKYELGRQPANTK+SSDKSIRRIRVRGGNVKWRAFR
Sbjct: 1   MGISRDSMHKRRATGGKKKAWRKKRKYELGRQPANTKLSSDKSIRRIRVRGGNVKWRAFR 60

Query: 61  LDTGNYSWGSEAVTRKSRILDVVYNASNNELVRTQTLVKSAIVQVDAAPFKQWYLQHYGV 120
           LDTGNYSWGSEAV+RK+RILDVVYNASNNELVRTQTLVKSA+VQVDAAPFKQWYLQHYGV
Sbjct: 61  LDTGNYSWGSEAVSRKTRILDVVYNASNNELVRTQTLVKSAVVQVDAAPFKQWYLQHYGV 120

Query: 121 DIGRKKKTTASSKKEEEAD---AATEEVKKSNHVQRKIEKRQQDRKLDPHIEEQFSSGRL 180
           DIGRKKKT AS+KK+EE D   AA EEVKKSNHVQRK+EKRQ+ RKLDPHIEEQFSSGRL
Sbjct: 121 DIGRKKKTAASAKKDEEGDAAAAAAEEVKKSNHVQRKLEKRQEGRKLDPHIEEQFSSGRL 180

Query: 181 MACISSRPGQCGRADGYILEGKELEFYMKKLQRKKGKGAGAS 220
           MACISSRPGQCGRADGYILEGKELEFYMKKLQRKKGKGAGA+
Sbjct: 181 MACISSRPGQCGRADGYILEGKELEFYMKKLQRKKGKGAGAA 222

[Close]
BLAST of Cp4.1LG07g07310 vs. NCBI nr
Match: gi|802588536|ref|XP_012070941.1| (PREDICTED: 40S ribosomal protein S8 [Jatropha curcas])

HSP 1 Score: 392.5 bits (1007), Expect = 4.8e-106
Identity = 197/219 (89.95%), Postives = 209/219 (95.43%), Query Frame = 1 

Query: 1   MGISRDSMHKRRATGGKKKAWRKKRKYELGRQPANTKISSDKSIRRIRVRGGNVKWRAFR 60
           MGISRDSMHKRRATGGKKKAWRKKRKYELGRQPANTK+SS+K++RRIRVRGGNVKWRA R
Sbjct: 1   MGISRDSMHKRRATGGKKKAWRKKRKYELGRQPANTKLSSNKTVRRIRVRGGNVKWRALR 60

Query: 61  LDTGNYSWGSEAVTRKSRILDVVYNASNNELVRTQTLVKSAIVQVDAAPFKQWYLQHYGV 120
           LDTGNYSWGSEAVTRK+RILDVVYNASNNELVRTQTLVKSAIVQVDAAPFKQWYLQHYGV
Sbjct: 61  LDTGNYSWGSEAVTRKTRILDVVYNASNNELVRTQTLVKSAIVQVDAAPFKQWYLQHYGV 120

Query: 121 DIGRKKKTTASSKKEEEADAATEEVKKSNHVQRKIEKRQQDRKLDPHIEEQFSSGRLMAC 180
           DIGRKKK  A+ K+ EE + ATEEVKKSNHV RK+EKRQQ RKLDPHIEEQF+ GRLMAC
Sbjct: 121 DIGRKKKVAATKKEGEEGEGATEEVKKSNHVLRKLEKRQQTRKLDPHIEEQFAGGRLMAC 180

Query: 181 ISSRPGQCGRADGYILEGKELEFYMKKLQRKKGKGAGAS 220
           ISSRPGQCGRADGYILEGKELEFYMKK+QRKKGKGAGA+
Sbjct: 181 ISSRPGQCGRADGYILEGKELEFYMKKIQRKKGKGAGAA 219

The following BLAST results are available for this feature:
BLAST of Cp4.1LG07g07310 vs. Swiss-Prot
Match NameE-valueIdentityDescription
RS8_ORYSJ1.1e-10286.8240S ribosomal protein S8 OS=Oryza sativa subsp. japonica GN=RPS8 PE=2 SV=2[more]
RS8_MAIZE7.2e-10285.5240S ribosomal protein S8 OS=Zea mays GN=RPS8 PE=2 SV=2[more]
RS8_PRUAR3.6e-10185.4540S ribosomal protein S8 OS=Prunus armeniaca GN=RPS8 PE=2 SV=1[more]
RS81_ARATH8.2e-9881.4540S ribosomal protein S8-1 OS=Arabidopsis thaliana GN=RPS8A PE=2 SV=1[more]
RS82_ARATH4.1e-9783.1140S ribosomal protein S8-2 OS=Arabidopsis thaliana GN=RPS8B PE=2 SV=1[more]
BLAST of Cp4.1LG07g07310 vs. TrEMBL
Match NameE-valueIdentityDescription
A0A0A0LJA0_CUCSA1.4e-11295.8940S ribosomal protein S8 OS=Cucumis sativus GN=Csa_2G059750 PE=3 SV=1[more]
A0A0A0KFT0_CUCSA1.5e-10992.7940S ribosomal protein S8 OS=Cucumis sativus GN=Csa_6G382970 PE=3 SV=1[more]
A0A067KSQ5_JATCU3.4e-10689.9540S ribosomal protein S8 OS=Jatropha curcas GN=JCGZ_00973 PE=3 SV=1[more]
B9SSR3_RICCO4.4e-10689.9540S ribosomal protein S8 OS=Ricinus communis GN=RCOM_0046320 PE=3 SV=1[more]
A0A0D2VFW2_GOSRA1.8e-10488.8940S ribosomal protein S8 OS=Gossypium raimondii GN=B456_013G156600 PE=3 SV=1[more]
BLAST of Cp4.1LG07g07310 vs. TAIR10
Match NameE-valueIdentityDescription
AT5G20290.14.6e-9981.45 Ribosomal protein S8e family protein[more]
AT5G59240.12.3e-9883.11 Ribosomal protein S8e family protein[more]
BLAST of Cp4.1LG07g07310 vs. NCBI nr
Match NameE-valueIdentityDescription
gi|659069757|ref|XP_008451649.1|5.3e-11396.35PREDICTED: 40S ribosomal protein S8-like [Cucumis melo][more]
gi|449461203|ref|XP_004148331.1|2.0e-11295.89PREDICTED: 40S ribosomal protein S8 [Cucumis sativus][more]
gi|659133447|ref|XP_008466734.1|3.2e-11094.55PREDICTED: 40S ribosomal protein S8-2 [Cucumis melo][more]
gi|449464166|ref|XP_004149800.1|2.1e-10992.79PREDICTED: 40S ribosomal protein S8 [Cucumis sativus][more]
gi|802588536|ref|XP_012070941.1|4.8e-10689.95PREDICTED: 40S ribosomal protein S8 [Jatropha curcas][more]
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: Biological Process
TermDefinition
GO:0006412translation
Vocabulary: Cellular Component
TermDefinition
GO:0005840ribosome
GO:0005622intracellular
Vocabulary: Molecular Function
TermDefinition
GO:0003735structural constituent of ribosome
Vocabulary: INTERPRO
TermDefinition
IPR022309Ribosomal_S8e/biogenesis_NSA2
IPR018283Ribosomal_S8e_CS
IPR001047Ribosomal_S8e
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0042254 ribosome biogenesis
biological_process GO:0006412 translation
cellular_component GO:0005840 ribosome
cellular_component GO:0005622 intracellular
molecular_function GO:0003735 structural constituent of ribosome
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Cp4.1LG07g07310.1Cp4.1LG07g07310.1mRNA


InterPro
Analysis Name: InterPro Annotations of Cucurbita pepo
Date Performed: 2017-12-02
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR001047Ribosomal protein S8ePANTHERPTHR1039440S RIBOSOMAL PROTEIN S8coord: 2..214
score: 2.4E
IPR001047Ribosomal protein S8eTIGRFAMsTIGR00307TIGR00307coord: 1..198
score: 2.4
IPR018283Ribosomal protein S8e, conserved sitePROSITEPS01193RIBOSOMAL_S8Ecoord: 11..30
scor
IPR022309Ribosomal protein S8e/ribosomal biogenesis NSA2PFAMPF01201Ribosomal_S8ecoord: 1..196
score: 1.2

Synteny
The following gene(s) are orthologous to this gene:
GeneOrthologueOrganismBlock
Cp4.1LG07g07310Cucsa.089300Cucumber (Gy14) v1cgycpeB0179
Cp4.1LG07g07310CmaCh12G008860Cucurbita maxima (Rimu)cmacpeB203
Cp4.1LG07g07310CmaCh05G006890Cucurbita maxima (Rimu)cmacpeB790
Cp4.1LG07g07310CmoCh05G007240Cucurbita moschata (Rifu)cmocpeB743
Cp4.1LG07g07310CmoCh12G008940Cucurbita moschata (Rifu)cmocpeB175
Cp4.1LG07g07310Cla022817Watermelon (97103) v1cpewmB814
Cp4.1LG07g07310Csa2G059750Cucumber (Chinese Long) v2cpecuB811
Cp4.1LG07g07310MELO3C004020Melon (DHL92) v3.5.1cpemeB777
Cp4.1LG07g07310ClCG11G012110Watermelon (Charleston Gray)cpewcgB723
Cp4.1LG07g07310CSPI02G06060Wild cucumber (PI 183967)cpecpiB812
Cp4.1LG07g07310Lsi11G007610Bottle gourd (USVL1VR-Ls)cpelsiB654
Cp4.1LG07g07310MELO3C004020.2Melon (DHL92) v3.6.1cpemedB913
Cp4.1LG07g07310CsaV3_2G008440Cucumber (Chinese Long) v3cpecucB1005
Cp4.1LG07g07310Bhi06G001114Wax gourdcpewgoB1018
Cp4.1LG07g07310CsGy2G006180Cucumber (Gy14) v2cgybcpeB261
Cp4.1LG07g07310Carg24219Silver-seed gourdcarcpeB1382
Cp4.1LG07g07310Carg08377Silver-seed gourdcarcpeB0089
The following gene(s) are paralogous to this gene:
GeneParalogueOrganismBlock
Cp4.1LG07g07310Cp4.1LG11g06420Cucurbita pepo (Zucchini)cpecpeB150
The following block(s) are covering this gene:
GeneOrganismBlock
Cp4.1LG07g07310Silver-seed gourdcarcpeB0848
Cp4.1LG07g07310Cucumber (Chinese Long) v3cpecucB0999
Cp4.1LG07g07310Wax gourdcpewgoB1071
Cp4.1LG07g07310Cucurbita pepo (Zucchini)cpecpeB142
Cp4.1LG07g07310Cucurbita pepo (Zucchini)cpecpeB499
Cp4.1LG07g07310Cucurbita maxima (Rimu)cmacpeB163
Cp4.1LG07g07310Cucurbita moschata (Rifu)cmocpeB140
Cp4.1LG07g07310Wild cucumber (PI 183967)cpecpiB807
Cp4.1LG07g07310Cucumber (Chinese Long) v2cpecuB807
Cp4.1LG07g07310Bottle gourd (USVL1VR-Ls)cpelsiB681
Cp4.1LG07g07310Watermelon (Charleston Gray)cpewcgB745
Cp4.1LG07g07310Watermelon (97103) v1cpewmB820
Cp4.1LG07g07310Melon (DHL92) v3.5.1cpemeB749
Cp4.1LG07g07310Cucumber (Gy14) v2cgybcpeB145
Cp4.1LG07g07310Melon (DHL92) v3.6.1cpemedB888