BLAST of Cp4.1LG04g03350.1 vs. Swiss-Prot
Match:
PPR8_ARATH (Pentatricopeptide repeat-containing protein At1g03540 OS=Arabidopsis thaliana GN=PCMP-E4 PE=2 SV=1)
HSP 1 Score: 447.2 bits (1149), Expect = 2.0e-124
Identity = 222/372 (59.68%), Postives = 276/372 (74.19%), Query Frame = 1
Query: 3 LFIKRHCRSFTSQNLKNS--THPPTKESQILQFCGSDLLHDALHTLNSLDSFDSTTNKSI 62
+ +KRH S L S + PTK+S+IL+ C L +A+ LNS S +
Sbjct: 4 IILKRHFSQHASLCLTPSISSSAPTKQSRILELCKLGQLTEAIRILNSTHSSEIPATPK- 63
Query: 63 LYASLLQTCTKVASFTHGRQIHAHVLKSGLEADRFVGNSLLSLYFKLGSDFRLTRRVFDG 122
LYASLLQTC KV SF HG Q HAHV+KSGLE DR VGNSLLSLYFKLG R TRRVFDG
Sbjct: 64 LYASLLQTCNKVFSFIHGIQFHAHVVKSGLETDRNVGNSLLSLYFKLGPGMRETRRVFDG 123
Query: 123 LFVKDVVSWTSMITSYVREGKPGNAIELFWDMLDLGIEPNGFTLSAVIKACSEIGNLVLG 182
FVKD +SWTSM++ YV + A+E+F +M+ G++ N FTLS+ +KACSE+G + LG
Sbjct: 124 RFVKDAISWTSMMSGYVTGKEHVKALEVFVEMVSFGLDANEFTLSSAVKACSELGEVRLG 183
Query: 183 RCFHGLVVRHGFNSNHVIVSSLIDMYGRNFASSDARQLFDEMPEPDAICWTSVISALTRN 242
RCFHG+V+ HGF NH I S+L +YG N DAR++FDEMPEPD ICWT+V+SA ++N
Sbjct: 184 RCFHGVVITHGFEWNHFISSTLAYLYGVNREPVDARRVFDEMPEPDVICWTAVLSAFSKN 243
Query: 243 DLYEDALGFFYLMLRTYSLSPDGFTFGSVLTACANLGRLRQGEEVHAKVIAHGLGGNVVV 302
DLYE+ALG FY M R L PDG TFG+VLTAC NL RL+QG+E+H K+I +G+G NVVV
Sbjct: 244 DLYEEALGLFYAMHRGKGLVPDGSTFGTVLTACGNLRRLKQGKEIHGKLITNGIGSNVVV 303
Query: 303 ESSLVDMYGKCGAVEKSQRVFDRMSKRNSVSWSALLGVYCQNGDFEKVINIFRGMEKIDL 362
ESSL+DMYGKCG+V ++++VF+ MSK+NSVSWSALLG YCQNG+ EK I IFR ME+ DL
Sbjct: 304 ESSLLDMYGKCGSVREARQVFNGMSKKNSVSWSALLGGYCQNGEHEKAIEIFREMEEKDL 363
Query: 363 YSFGTVIRACAG 373
Y FGTV++ACAG
Sbjct: 364 YCFGTVLKACAG 374
BLAST of Cp4.1LG04g03350.1 vs. Swiss-Prot
Match:
PP252_ARATH (Pentatricopeptide repeat-containing protein At3g24000, mitochondrial OS=Arabidopsis thaliana GN=PCMP-H87 PE=3 SV=1)
HSP 1 Score: 205.7 bits (522), Expect = 1.0e-51
Identity = 135/409 (33.01%), Postives = 214/409 (52.32%), Query Frame = 1
Query: 27 ESQILQFCGSDLLHDALHTLNSLDSFDSTTNKSILYASLLQTCTKVASFTHGRQIHAHVL 86
E + L+F +DLL + N L+ ++ Y +LL+ CT GR +HAH+L
Sbjct: 31 EDESLKFPSNDLLLRT--SSNDLEGSYIPADRRF-YNTLLKKCTVFKLLIQGRIVHAHIL 90
Query: 87 KSGLEADRFVGNSLLSLYFKLGSDFRLTRRVFDGLFVKDVVSWTSMITSYVREGKPGNAI 146
+S D +GN+LL++Y K GS R+VF+ + +D V+WT++I+ Y + +P +A+
Sbjct: 91 QSIFRHDIVMGNTLLNMYAKCGS-LEEARKVFEKMPQRDFVTWTTLISGYSQHDRPCDAL 150
Query: 147 ELFWDMLDLGIEPNGFTLSAVIKACSEIGNLVLGRCFHGLVVRHGFNSNHVIVSSLIDMY 206
F ML G PN FTLS+VIKA + G HG V+ GF+SN + S+L+D+Y
Sbjct: 151 LFFNQMLRFGYSPNEFTLSSVIKAAAAERRGCCGHQLHGFCVKCGFDSNVHVGSALLDLY 210
Query: 207 GRNFASSDARQLFDEMPEPDAICWTSVISALTRNDLYEDALGFFYLMLRTYSLSPDGFTF 266
R DA+ +FD + + + W ++I+ R E AL F MLR P F++
Sbjct: 211 TRYGLMDDAQLVFDALESRNDVSWNALIAGHARRSGTEKALELFQGMLRD-GFRPSHFSY 270
Query: 267 GSVLTACANLGRLRQGEEVHAKVIAHGLGGNVVVESSLVDMYGKCGAVEKSQRVFDRMSK 326
S+ AC++ G L QG+ VHA +I G ++L+DMY K G++ ++++FDR++K
Sbjct: 271 ASLFGACSSTGFLEQGKWVHAYMIKSGEKLVAFAGNTLLDMYAKSGSIHDARKIFDRLAK 330
Query: 327 RNSVSWSALLGVYCQNGDFEKVINIFRGMEKIDL----YSFGTVIRACA-----GYCFHA 386
R+ VSW++LL Y Q+G ++ + F M ++ + SF +V+ AC+ +H
Sbjct: 331 RDVVSWNSLLTAYAQHGFGKEAVWWFEEMRRVGIRPNEISFLSVLTACSHSGLLDEGWHY 390
Query: 387 RPKMKNSHEKPATKHIENVPTWSKRLLDAINRDYRKFVNFPWRLSVAIF 427
MK P H V R D +NR R P + AI+
Sbjct: 391 YELMKKDGIVPEAWHYVTVVDLLGRAGD-LNRALRFIEEMPIEPTAAIW 433
BLAST of Cp4.1LG04g03350.1 vs. Swiss-Prot
Match:
PP146_ARATH (Pentatricopeptide repeat-containing protein At2g03380, mitochondrial OS=Arabidopsis thaliana GN=PCMP-E47 PE=3 SV=1)
HSP 1 Score: 204.9 bits (520), Expect = 1.7e-51
Identity = 113/349 (32.38%), Postives = 192/349 (55.01%), Query Frame = 1
Query: 28 SQILQFCGSDLLHDALHTLNSLDSFDSTTNKSILYASLLQTCTKVASFTHGRQIHAHVLK 87
S I + +DL + L N + ++ Y +L+ CTK+++ G+ H ++K
Sbjct: 212 SMIAGYVKNDLCEEGLVLFNRMRE-NNVLGNEYTYGTLIMACTKLSALHQGKWFHGCLVK 271
Query: 88 SGLEADRFVGNSLLSLYFKLGSDFRLTRRVFDGLFVKDVVSWTSMITSYVREGKPGNAIE 147
SG+E + SLL +Y K G D RRVF+ D+V WT+MI Y G A+
Sbjct: 272 SGIELSSCLVTSLLDMYVKCG-DISNARRVFNEHSHVDLVMWTAMIVGYTHNGSVNEALS 331
Query: 148 LFWDMLDLGIEPNGFTLSAVIKACSEIGNLVLGRCFHGLVVRHGFNSNHVIVSSLIDMYG 207
LF M + I+PN T+++V+ C I NL LGR HGL ++ G +V ++L+ MY
Sbjct: 332 LFQKMKGVEIKPNCVTIASVLSGCGLIENLELGRSVHGLSIKVGIWDTNV-ANALVHMYA 391
Query: 208 RNFASSDARQLFDEMPEPDAICWTSVISALTRNDLYEDALGFFYLMLRTYSLSPDGFTFG 267
+ + + DA+ +F+ E D + W S+IS ++N +AL F+ M + S++P+G T
Sbjct: 392 KCYQNRDAKYVFEMESEKDIVAWNSIISGFSQNGSIHEALFLFHRM-NSESVTPNGVTVA 451
Query: 268 SVLTACANLGRLRQGEEVHAKVIAHGL--GGNVVVESSLVDMYGKCGAVEKSQRVFDRMS 327
S+ +ACA+LG L G +HA + G +V V ++L+D Y KCG + ++ +FD +
Sbjct: 452 SLFSACASLGSLAVGSSLHAYSVKLGFLASSSVHVGTALLDFYAKCGDPQSARLIFDTIE 511
Query: 328 KRNSVSWSALLGVYCQNGDFEKVINIFRGM----EKIDLYSFGTVIRAC 371
++N+++WSA++G Y + GD + +F M +K + +F +++ AC
Sbjct: 512 EKNTITWSAMIGGYGKQGDTIGSLELFEEMLKKQQKPNESTFTSILSAC 556
BLAST of Cp4.1LG04g03350.1 vs. Swiss-Prot
Match:
PP348_ARATH (Pentatricopeptide repeat-containing protein At4g33990 OS=Arabidopsis thaliana GN=EMB2758 PE=3 SV=2)
HSP 1 Score: 202.6 bits (514), Expect = 8.6e-51
Identity = 116/349 (33.24%), Postives = 194/349 (55.59%), Query Frame = 1
Query: 28 SQILQFCGSDLLHDALHTLNSLDSFDSTTNKSILYASLLQTCTKVASFTHGRQIHAHVLK 87
+ I +C S +AL N L + DS T SLL CT+ F G IH++ +K
Sbjct: 221 AMISGYCQSGNAKEALTLSNGLRAMDSVT-----VVSLLSACTEAGDFNRGVTIHSYSIK 280
Query: 88 SGLEADRFVGNSLLSLYFKLGSDFRLTRRVFDGLFVKDVVSWTSMITSYVREGKPGNAIE 147
GLE++ FV N L+ LY + G R ++VFD ++V+D++SW S+I +Y +P AI
Sbjct: 281 HGLESELFVSNKLIDLYAEFGR-LRDCQKVFDRMYVRDLISWNSIIKAYELNEQPLRAIS 340
Query: 148 LFWDMLDLGIEPNGFTLSAVIKACSEIGNLVLGRCFHGLVVRHG-FNSNHVIVSSLIDMY 207
LF +M I+P+ TL ++ S++G++ R G +R G F + I ++++ MY
Sbjct: 341 LFQEMRLSRIQPDCLTLISLASILSQLGDIRACRSVQGFTLRKGWFLEDITIGNAVVVMY 400
Query: 208 GRNFASSDARQLFDEMPEPDAICWTSVISALTRNDLYEDALGFFYLMLRTYSLSPDGFTF 267
+ AR +F+ +P D I W ++IS +N +A+ + +M ++ + T+
Sbjct: 401 AKLGLVDSARAVFNWLPNTDVISWNTIISGYAQNGFASEAIEMYNIMEEEGEIAANQGTW 460
Query: 268 GSVLTACANLGRLRQGEEVHAKVIAHGLGGNVVVESSLVDMYGKCGAVEKSQRVFDRMSK 327
SVL AC+ G LRQG ++H +++ +GL +V V +SL DMYGKCG +E + +F ++ +
Sbjct: 461 VSVLPACSQAGALRQGMKLHGRLLKNGLYLDVFVVTSLADMYGKCGRLEDALSLFYQIPR 520
Query: 328 RNSVSWSALLGVYCQNGDFEKVINIFRGM----EKIDLYSFGTVIRACA 372
NSV W+ L+ + +G EK + +F+ M K D +F T++ AC+
Sbjct: 521 VNSVPWNTLIACHGFHGHGEKAVMLFKEMLDEGVKPDHITFVTLLSACS 563
BLAST of Cp4.1LG04g03350.1 vs. Swiss-Prot
Match:
PP319_ARATH (Pentatricopeptide repeat-containing protein At4g18520 OS=Arabidopsis thaliana GN=PCMP-A2 PE=2 SV=1)
HSP 1 Score: 199.5 bits (506), Expect = 7.3e-50
Identity = 106/311 (34.08%), Postives = 176/311 (56.59%), Query Frame = 1
Query: 64 SLLQTCTKVASFTHGRQIHAHVLKSGLEADRFVGNSLLSLYFKLGSDFRLTRRVFDGLFV 123
S+L+ C++ + GRQ+H+ V+K ++ D FVG SL+ +Y K G + R+VFDG+
Sbjct: 289 SILKACSEEKALRFGRQVHSLVVKRMIKTDVFVGTSLMDMYAKCG-EISDCRKVFDGMSN 348
Query: 124 KDVVSWTSMITSYVREGKPGNAIELFWDMLDLGIEPNGFTLSAVIKACSEIGNLVLGRCF 183
++ V+WTS+I ++ REG AI LF M + N T+ ++++AC +G L+LG+
Sbjct: 349 RNTVTWTSIIAAHAREGFGEEAISLFRIMKRRHLIANNLTVVSILRACGSVGALLLGKEL 408
Query: 184 HGLVVRHGFNSNHVIVSSLIDMYGRNFASSDARQLFDEMPEPDAICWTSVISALTRNDLY 243
H ++++ N I S+L+ +Y + S DA + ++P D + WT++IS +
Sbjct: 409 HAQIIKNSIEKNVYIGSTLVWLYCKCGESRDAFNVLQQLPSRDVVSWTAMISGCSSLGHE 468
Query: 244 EDALGFFYLMLRTYSLSPDGFTFGSVLTACANLGRLRQGEEVHAKVIAHGLGGNVVVESS 303
+AL F M++ + P+ FT+ S L ACAN L G +H+ + NV V S+
Sbjct: 469 SEALDFLKEMIQE-GVEPNPFTYSSALKACANSESLLIGRSIHSIAKKNHALSNVFVGSA 528
Query: 304 LVDMYGKCGAVEKSQRVFDRMSKRNSVSWSALLGVYCQNGDFEKVINIFRGME----KID 363
L+ MY KCG V ++ RVFD M ++N VSW A++ Y +NG + + + ME ++D
Sbjct: 529 LIHMYAKCGFVSEAFRVFDSMPEKNLVSWKAMIMGYARNGFCREALKLMYRMEAEGFEVD 588
Query: 364 LYSFGTVIRAC 371
Y F T++ C
Sbjct: 589 DYIFATILSTC 597
BLAST of Cp4.1LG04g03350.1 vs. TrEMBL
Match:
A0A0A0K5P0_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_7G047230 PE=4 SV=1)
HSP 1 Score: 609.0 bits (1569), Expect = 4.5e-171
Identity = 299/373 (80.16%), Postives = 324/373 (86.86%), Query Frame = 1
Query: 1 MRLFIKRHCRS-FTSQNLKNSTHPPTKESQILQFCGSDLLHDALHTLNSLDSFDSTTNKS 60
M LF+KRHC S FTSQN K STHP K SQILQFC S LL+DALH LNS+D +DS NK
Sbjct: 1 MMLFLKRHCSSSFTSQNFKYSTHPSIKLSQILQFCKSGLLNDALHLLNSIDLYDSRINKP 60
Query: 61 ILYASLLQTCTKVASFTHGRQIHAHVLKSGLEADRFVGNSLLSLYFKLGSDFRLTRRVFD 120
+LYASLLQTC KV SFT GRQ HAHV+KSGLE DRFVGNSLLSLYFKLGSD LTRRVFD
Sbjct: 61 LLYASLLQTCIKVDSFTRGRQFHAHVVKSGLETDRFVGNSLLSLYFKLGSDSLLTRRVFD 120
Query: 121 GLFVKDVVSWTSMITSYVREGKPGNAIELFWDMLDLGIEPNGFTLSAVIKACSEIGNLVL 180
GLFVKDVVSW SMIT YVREGK G AIELFWDMLD GIEPNGFTLSAVIKACSEIGNLVL
Sbjct: 121 GLFVKDVVSWASMITGYVREGKSGIAIELFWDMLDSGIEPNGFTLSAVIKACSEIGNLVL 180
Query: 181 GRCFHGLVVRHGFNSNHVIVSSLIDMYGRNFASSDARQLFDEMPEPDAICWTSVISALTR 240
G+CFHG+VVR GF+SN VI+SSLIDMYGRN SSDARQLFDE+ EPD +CWT+VISA TR
Sbjct: 181 GKCFHGVVVRRGFDSNPVILSSLIDMYGRNSVSSDARQLFDELLEPDPVCWTTVISAFTR 240
Query: 241 NDLYEDALGFFYLMLRTYSLSPDGFTFGSVLTACANLGRLRQGEEVHAKVIAHGLGGNVV 300
NDLYE+ALGFFYL R + L PD +TFGSVLTAC NLGRLRQGEE+HAKVIA+G GNVV
Sbjct: 241 NDLYEEALGFFYLKHRAHRLCPDNYTFGSVLTACGNLGRLRQGEEIHAKVIAYGFSGNVV 300
Query: 301 VESSLVDMYGKCGAVEKSQRVFDRMSKRNSVSWSALLGVYCQNGDFEKVINIFRGMEKID 360
ESSLVDMYGKCGAVEKSQR+FDRMS RNSVSWSALL VYC NGD+EK +N+FR M+++D
Sbjct: 301 TESSLVDMYGKCGAVEKSQRLFDRMSNRNSVSWSALLAVYCHNGDYEKAVNLFREMKEVD 360
Query: 361 LYSFGTVIRACAG 373
LYSFGTVIRACAG
Sbjct: 361 LYSFGTVIRACAG 373
BLAST of Cp4.1LG04g03350.1 vs. TrEMBL
Match:
M5XE21_PRUPE (Uncharacterized protein (Fragment) OS=Prunus persica GN=PRUPE_ppa019108mg PE=4 SV=1)
HSP 1 Score: 556.6 bits (1433), Expect = 2.6e-155
Identity = 274/372 (73.66%), Postives = 313/372 (84.14%), Query Frame = 1
Query: 1 MRLFIKRHCRSFTSQNLKNSTHPPTKESQILQFCGSDLLHDALHTLNSLDSFDSTTNKSI 60
M+L +KRHC S TS NL+++ P K+SQIL+ C LL DA+ LNS+DS + T K I
Sbjct: 1 MKLVLKRHCSSLTSLNLQSTKIPSPKQSQILRLCKLGLLSDAIRVLNSIDSGEITL-KPI 60
Query: 61 LYASLLQTCTKVASFTHGRQIHAHVLKSGLEADRFVGNSLLSLYFKLGSDFRLTRRVFDG 120
LYASLLQTCTK SF HG QIHAHV+KSGLE DRFVGNSLLSLYFKL + TRRVFDG
Sbjct: 61 LYASLLQTCTKAVSFNHGLQIHAHVVKSGLETDRFVGNSLLSLYFKLVPNMSETRRVFDG 120
Query: 121 LFVKDVVSWTSMITSYVREGKPGNAIELFWDMLDLGIEPNGFTLSAVIKACSEIGNLVLG 180
LFVKDV+SWTSMIT YVR GKPGN+IE+F+DML GIEPN FTLSAV+KACSEIG+L LG
Sbjct: 121 LFVKDVISWTSMITGYVRAGKPGNSIEVFYDMLKFGIEPNAFTLSAVVKACSEIGDLRLG 180
Query: 181 RCFHGLVVRHGFNSNHVIVSSLIDMYGRNFASSDARQLFDEMPEPDAICWTSVISALTRN 240
CFHG+VVR GF SNHVI+S+LI+MYGRN+ S DAR LFDE+ EP AICWTS+ISALTR+
Sbjct: 181 LCFHGVVVRRGFVSNHVIISALINMYGRNYRSEDARLLFDELTEPGAICWTSIISALTRS 240
Query: 241 DLYEDALGFFYLMLRTYSLSPDGFTFGSVLTACANLGRLRQGEEVHAKVIAHGLGGNVVV 300
DL+E+ALGFFYLM R + LSPDGFTFG+VL AC NLGRLRQG E+HAKVI +GL GNVVV
Sbjct: 241 DLFEEALGFFYLMHRYHGLSPDGFTFGTVLAACGNLGRLRQGREMHAKVITYGLCGNVVV 300
Query: 301 ESSLVDMYGKCGAVEKSQRVFDRMSKRNSVSWSALLGVYCQNGDFEKVINIFRGMEKIDL 360
ESSLVDMYGKCG+VE ++RVFDR+ K+NSVSWSALLGVYCQ GDFE VIN FR ME+ DL
Sbjct: 301 ESSLVDMYGKCGSVECARRVFDRIPKKNSVSWSALLGVYCQTGDFESVINHFREMEEADL 360
Query: 361 YSFGTVIRACAG 373
YSFGTV+RACAG
Sbjct: 361 YSFGTVLRACAG 371
BLAST of Cp4.1LG04g03350.1 vs. TrEMBL
Match:
A0A061E2T1_THECC (Pentatricopeptide repeat (PPR-like) superfamily protein OS=Theobroma cacao GN=TCM_007980 PE=4 SV=1)
HSP 1 Score: 526.6 bits (1355), Expect = 2.9e-146
Identity = 260/372 (69.89%), Postives = 301/372 (80.91%), Query Frame = 1
Query: 4 FIKRHCRSFTSQNLK-NSTHPPTKESQILQFCGSDLLHDALHTLNSLDSFDSTTN--KSI 63
F KRH SF S N S P K SQIL FC S L A+H LN+L TT+ K +
Sbjct: 7 FFKRHRCSFASFNPTFPSKTPSDKHSQILHFCKSAQLFPAIHLLNTLHFPSETTSSKKPL 66
Query: 64 LYASLLQTCTKVASFTHGRQIHAHVLKSGLEADRFVGNSLLSLYFKLGSDFRLTRRVFDG 123
LYASLLQTCT V SF+HG Q HAHV+KSGL+ DRFVGNSLL+LYFKLG DF TRRVFDG
Sbjct: 67 LYASLLQTCTNVQSFSHGLQFHAHVIKSGLQTDRFVGNSLLALYFKLGPDFTETRRVFDG 126
Query: 124 LFVKDVVSWTSMITSYVREGKPGNAIELFWDMLDLGIEPNGFTLSAVIKACSEIGNLVLG 183
LFVKDV+SWTSM++ Y++ GKP ++++LFW+ML G+EPNGFTLS VIKACSE+G L LG
Sbjct: 127 LFVKDVISWTSMVSGYIKAGKPESSLQLFWEMLGFGVEPNGFTLSTVIKACSELGKLRLG 186
Query: 184 RCFHGLVVRHGFNSNHVIVSSLIDMYGRNFASSDARQLFDEMPEPDAICWTSVISALTRN 243
CFHG+V++ GF SN VI S+LID YGRN+ +A ++FDE+PEPDAICWTSVISALTRN
Sbjct: 187 WCFHGVVIKRGFVSNRVISSALIDFYGRNWQLKEACEIFDELPEPDAICWTSVISALTRN 246
Query: 244 DLYEDALGFFYLMLRTYSLSPDGFTFGSVLTACANLGRLRQGEEVHAKVIAHGLGGNVVV 303
DLYE+AL FFYLM R + LSPDGFTFG+VLTAC NLGRLRQG++VHAKVI GL GNVVV
Sbjct: 247 DLYEEALRFFYLMHRNHGLSPDGFTFGTVLTACGNLGRLRQGKQVHAKVITCGLCGNVVV 306
Query: 304 ESSLVDMYGKCGAVEKSQRVFDRMSKRNSVSWSALLGVYCQNGDFEKVINIFRGMEKIDL 363
ESSL+DMYGKCG V++SQ VFDRMSK+NSVSWSALLGVYCQN D+E VI IFR M+K DL
Sbjct: 307 ESSLLDMYGKCGLVDESQCVFDRMSKKNSVSWSALLGVYCQNKDYESVIRIFREMDKTDL 366
Query: 364 YSFGTVIRACAG 373
Y FGTV+RACAG
Sbjct: 367 YCFGTVLRACAG 378
BLAST of Cp4.1LG04g03350.1 vs. TrEMBL
Match:
A0A067JXD0_JATCU (Uncharacterized protein OS=Jatropha curcas GN=JCGZ_25836 PE=4 SV=1)
HSP 1 Score: 524.6 bits (1350), Expect = 1.1e-145
Identity = 258/374 (68.98%), Postives = 302/374 (80.75%), Query Frame = 1
Query: 1 MRLF--IKRHCRSFTSQNLKNSTHPPTKESQILQFCGSDLLHDALHTLNSLDSFDSTTNK 60
M+LF IKRHC S S N S +P TKE +I+Q+C S L DALH LNSLDS NK
Sbjct: 1 MKLFLSIKRHCSSLASLNHNTSQNPQTKEFRIIQYCKSGALFDALHILNSLDSA-KLCNK 60
Query: 61 SILYASLLQTCTKVASFTHGRQIHAHVLKSGLEADRFVGNSLLSLYFKLGSDFRLTRRVF 120
LYASLLQTCTKV SF HG QIHAH++KSGLE DRF+GNSLL+LYFKLGS+F TRR+F
Sbjct: 61 PFLYASLLQTCTKVVSFNHGLQIHAHLIKSGLETDRFIGNSLLALYFKLGSNFFETRRLF 120
Query: 121 DGLFVKDVVSWTSMITSYVREGKPGNAIELFWDMLDLGIEPNGFTLSAVIKACSEIGNLV 180
DGL+ +DV+SWTSM+T Y++ GKP NAIELF +MLD GI+PNGFTLSA IKA S++GNL
Sbjct: 121 DGLYFRDVISWTSMVTGYIKVGKPKNAIELFLEMLDFGIDPNGFTLSAAIKASSDLGNLR 180
Query: 181 LGRCFHGLVVRHGFNSNHVIVSSLIDMYGRNFASSDARQLFDEMPEPDAICWTSVISALT 240
LG+C HG+V+ GF+SN+VI S+LIDMYGRN+ DA +LFD++ EPDAI WTSVISA T
Sbjct: 181 LGKCIHGVVISQGFDSNYVISSALIDMYGRNYGLEDACRLFDDLLEPDAISWTSVISAFT 240
Query: 241 RNDLYEDALGFFYLMLRTYSLSPDGFTFGSVLTACANLGRLRQGEEVHAKVIAHGLGGNV 300
RND+Y+ ALGFFYLM R L+PD FTFG+VLTAC NL RL++G+EVHA+VI G GNV
Sbjct: 241 RNDMYDKALGFFYLMQRKLGLAPDEFTFGTVLTACGNLRRLKRGKEVHARVITSGFSGNV 300
Query: 301 VVESSLVDMYGKCGAVEKSQRVFDRMSKRNSVSWSALLGVYCQNGDFEKVINIFRGMEKI 360
VVESSLVDMYGKCG V +SQ VFDRMS +NSVSWSALLG YCQNGDFE VI IFR +E
Sbjct: 301 VVESSLVDMYGKCGLVMESQHVFDRMSIKNSVSWSALLGGYCQNGDFESVIRIFREVESH 360
Query: 361 DLYSFGTVIRACAG 373
DLYSFGTV+RAC+G
Sbjct: 361 DLYSFGTVLRACSG 373
BLAST of Cp4.1LG04g03350.1 vs. TrEMBL
Match:
B9RW53_RICCO (Pentatricopeptide repeat-containing protein, putative OS=Ricinus communis GN=RCOM_1176200 PE=4 SV=1)
HSP 1 Score: 517.7 bits (1332), Expect = 1.3e-143
Identity = 258/373 (69.17%), Postives = 303/373 (81.23%), Query Frame = 1
Query: 1 MRLFIKRHCRSFTSQNLKNSTHPPTKESQILQFCGSDLLHDALHTLNSLDSFDSTTNKSI 60
M LF KRHC S S NLKN KE +I+ FC S L AL LNS+DS + +NK
Sbjct: 1 MNLF-KRHCSSLPSFNLKN------KEIKIIGFCKSGALLHALDILNSIDSRE-ISNKPF 60
Query: 61 LYASLLQTCTKVASFTHGRQIHAHVLKSGLEADRFVGNSLLSLYFKLGSDFRLTRRVFDG 120
+YASLLQTCTKV SF HG QIHAHV+KSGLE DRFVGNSLL+LYFKL +DF TRRVFDG
Sbjct: 61 IYASLLQTCTKVVSFNHGLQIHAHVVKSGLETDRFVGNSLLALYFKLSTDFFETRRVFDG 120
Query: 121 LFVKDVVSWTSMITSYVREGKPGNAIELFWDMLDLGIEPNGFTLSAVIKACSEIGNLVLG 180
L+ +DV+SWTSMIT YV+ KP A++LFW+MLD+G++PN FTLSAVIKAC+++G L+LG
Sbjct: 121 LYFRDVISWTSMITGYVKGEKPKKALDLFWEMLDVGVDPNAFTLSAVIKACTDLGTLMLG 180
Query: 181 RCFHGLVVRHGFNSNHVIVSSLIDMYGRNFASSDARQLFDEMPEPDAICWTSVISALTRN 240
+CFH +++ GF+SNHVI S+LID+YGRN+ DAR+LFDE+ EPDAICWTSVISA TRN
Sbjct: 181 KCFHCVIMIRGFHSNHVIGSALIDLYGRNYELDDARRLFDELLEPDAICWTSVISAYTRN 240
Query: 241 DLYEDALGFFYLMLRTYSLSPDGFTFGSVLTACANLGRLRQGEEVHAKVIAHGLGGNVVV 300
D+Y+ ALGFFYLM R L+PDGFTFG+VLTAC NL RL+QG+EVHAK+I G GNVVV
Sbjct: 241 DMYDKALGFFYLMQRKLGLAPDGFTFGTVLTACGNLRRLKQGKEVHAKLITSGFSGNVVV 300
Query: 301 ESSLVDMYGKCGAVEKSQRVFDRMSKRNSVSWSALLGVYCQNGDFEKVINIFRGM-EKID 360
ESSLVDMYGKCG V++SQRVFDRMS +NSVSWSALLG +CQNGDFE VI IFR M E D
Sbjct: 301 ESSLVDMYGKCGLVDESQRVFDRMSVKNSVSWSALLGGFCQNGDFESVIRIFREMGEADD 360
Query: 361 LYSFGTVIRACAG 373
LYSFGTV+RACAG
Sbjct: 361 LYSFGTVLRACAG 365
BLAST of Cp4.1LG04g03350.1 vs. TAIR10
Match:
AT1G03540.1 (AT1G03540.1 Pentatricopeptide repeat (PPR-like) superfamily protein)
HSP 1 Score: 447.2 bits (1149), Expect = 1.1e-125
Identity = 222/372 (59.68%), Postives = 276/372 (74.19%), Query Frame = 1
Query: 3 LFIKRHCRSFTSQNLKNS--THPPTKESQILQFCGSDLLHDALHTLNSLDSFDSTTNKSI 62
+ +KRH S L S + PTK+S+IL+ C L +A+ LNS S +
Sbjct: 4 IILKRHFSQHASLCLTPSISSSAPTKQSRILELCKLGQLTEAIRILNSTHSSEIPATPK- 63
Query: 63 LYASLLQTCTKVASFTHGRQIHAHVLKSGLEADRFVGNSLLSLYFKLGSDFRLTRRVFDG 122
LYASLLQTC KV SF HG Q HAHV+KSGLE DR VGNSLLSLYFKLG R TRRVFDG
Sbjct: 64 LYASLLQTCNKVFSFIHGIQFHAHVVKSGLETDRNVGNSLLSLYFKLGPGMRETRRVFDG 123
Query: 123 LFVKDVVSWTSMITSYVREGKPGNAIELFWDMLDLGIEPNGFTLSAVIKACSEIGNLVLG 182
FVKD +SWTSM++ YV + A+E+F +M+ G++ N FTLS+ +KACSE+G + LG
Sbjct: 124 RFVKDAISWTSMMSGYVTGKEHVKALEVFVEMVSFGLDANEFTLSSAVKACSELGEVRLG 183
Query: 183 RCFHGLVVRHGFNSNHVIVSSLIDMYGRNFASSDARQLFDEMPEPDAICWTSVISALTRN 242
RCFHG+V+ HGF NH I S+L +YG N DAR++FDEMPEPD ICWT+V+SA ++N
Sbjct: 184 RCFHGVVITHGFEWNHFISSTLAYLYGVNREPVDARRVFDEMPEPDVICWTAVLSAFSKN 243
Query: 243 DLYEDALGFFYLMLRTYSLSPDGFTFGSVLTACANLGRLRQGEEVHAKVIAHGLGGNVVV 302
DLYE+ALG FY M R L PDG TFG+VLTAC NL RL+QG+E+H K+I +G+G NVVV
Sbjct: 244 DLYEEALGLFYAMHRGKGLVPDGSTFGTVLTACGNLRRLKQGKEIHGKLITNGIGSNVVV 303
Query: 303 ESSLVDMYGKCGAVEKSQRVFDRMSKRNSVSWSALLGVYCQNGDFEKVINIFRGMEKIDL 362
ESSL+DMYGKCG+V ++++VF+ MSK+NSVSWSALLG YCQNG+ EK I IFR ME+ DL
Sbjct: 304 ESSLLDMYGKCGSVREARQVFNGMSKKNSVSWSALLGGYCQNGEHEKAIEIFREMEEKDL 363
Query: 363 YSFGTVIRACAG 373
Y FGTV++ACAG
Sbjct: 364 YCFGTVLKACAG 374
BLAST of Cp4.1LG04g03350.1 vs. TAIR10
Match:
AT3G24000.1 (AT3G24000.1 Tetratricopeptide repeat (TPR)-like superfamily protein)
HSP 1 Score: 205.7 bits (522), Expect = 5.7e-53
Identity = 135/409 (33.01%), Postives = 214/409 (52.32%), Query Frame = 1
Query: 27 ESQILQFCGSDLLHDALHTLNSLDSFDSTTNKSILYASLLQTCTKVASFTHGRQIHAHVL 86
E + L+F +DLL + N L+ ++ Y +LL+ CT GR +HAH+L
Sbjct: 31 EDESLKFPSNDLLLRT--SSNDLEGSYIPADRRF-YNTLLKKCTVFKLLIQGRIVHAHIL 90
Query: 87 KSGLEADRFVGNSLLSLYFKLGSDFRLTRRVFDGLFVKDVVSWTSMITSYVREGKPGNAI 146
+S D +GN+LL++Y K GS R+VF+ + +D V+WT++I+ Y + +P +A+
Sbjct: 91 QSIFRHDIVMGNTLLNMYAKCGS-LEEARKVFEKMPQRDFVTWTTLISGYSQHDRPCDAL 150
Query: 147 ELFWDMLDLGIEPNGFTLSAVIKACSEIGNLVLGRCFHGLVVRHGFNSNHVIVSSLIDMY 206
F ML G PN FTLS+VIKA + G HG V+ GF+SN + S+L+D+Y
Sbjct: 151 LFFNQMLRFGYSPNEFTLSSVIKAAAAERRGCCGHQLHGFCVKCGFDSNVHVGSALLDLY 210
Query: 207 GRNFASSDARQLFDEMPEPDAICWTSVISALTRNDLYEDALGFFYLMLRTYSLSPDGFTF 266
R DA+ +FD + + + W ++I+ R E AL F MLR P F++
Sbjct: 211 TRYGLMDDAQLVFDALESRNDVSWNALIAGHARRSGTEKALELFQGMLRD-GFRPSHFSY 270
Query: 267 GSVLTACANLGRLRQGEEVHAKVIAHGLGGNVVVESSLVDMYGKCGAVEKSQRVFDRMSK 326
S+ AC++ G L QG+ VHA +I G ++L+DMY K G++ ++++FDR++K
Sbjct: 271 ASLFGACSSTGFLEQGKWVHAYMIKSGEKLVAFAGNTLLDMYAKSGSIHDARKIFDRLAK 330
Query: 327 RNSVSWSALLGVYCQNGDFEKVINIFRGMEKIDL----YSFGTVIRACA-----GYCFHA 386
R+ VSW++LL Y Q+G ++ + F M ++ + SF +V+ AC+ +H
Sbjct: 331 RDVVSWNSLLTAYAQHGFGKEAVWWFEEMRRVGIRPNEISFLSVLTACSHSGLLDEGWHY 390
Query: 387 RPKMKNSHEKPATKHIENVPTWSKRLLDAINRDYRKFVNFPWRLSVAIF 427
MK P H V R D +NR R P + AI+
Sbjct: 391 YELMKKDGIVPEAWHYVTVVDLLGRAGD-LNRALRFIEEMPIEPTAAIW 433
BLAST of Cp4.1LG04g03350.1 vs. TAIR10
Match:
AT2G03380.1 (AT2G03380.1 Pentatricopeptide repeat (PPR) superfamily protein)
HSP 1 Score: 204.9 bits (520), Expect = 9.8e-53
Identity = 113/349 (32.38%), Postives = 192/349 (55.01%), Query Frame = 1
Query: 28 SQILQFCGSDLLHDALHTLNSLDSFDSTTNKSILYASLLQTCTKVASFTHGRQIHAHVLK 87
S I + +DL + L N + ++ Y +L+ CTK+++ G+ H ++K
Sbjct: 212 SMIAGYVKNDLCEEGLVLFNRMRE-NNVLGNEYTYGTLIMACTKLSALHQGKWFHGCLVK 271
Query: 88 SGLEADRFVGNSLLSLYFKLGSDFRLTRRVFDGLFVKDVVSWTSMITSYVREGKPGNAIE 147
SG+E + SLL +Y K G D RRVF+ D+V WT+MI Y G A+
Sbjct: 272 SGIELSSCLVTSLLDMYVKCG-DISNARRVFNEHSHVDLVMWTAMIVGYTHNGSVNEALS 331
Query: 148 LFWDMLDLGIEPNGFTLSAVIKACSEIGNLVLGRCFHGLVVRHGFNSNHVIVSSLIDMYG 207
LF M + I+PN T+++V+ C I NL LGR HGL ++ G +V ++L+ MY
Sbjct: 332 LFQKMKGVEIKPNCVTIASVLSGCGLIENLELGRSVHGLSIKVGIWDTNV-ANALVHMYA 391
Query: 208 RNFASSDARQLFDEMPEPDAICWTSVISALTRNDLYEDALGFFYLMLRTYSLSPDGFTFG 267
+ + + DA+ +F+ E D + W S+IS ++N +AL F+ M + S++P+G T
Sbjct: 392 KCYQNRDAKYVFEMESEKDIVAWNSIISGFSQNGSIHEALFLFHRM-NSESVTPNGVTVA 451
Query: 268 SVLTACANLGRLRQGEEVHAKVIAHGL--GGNVVVESSLVDMYGKCGAVEKSQRVFDRMS 327
S+ +ACA+LG L G +HA + G +V V ++L+D Y KCG + ++ +FD +
Sbjct: 452 SLFSACASLGSLAVGSSLHAYSVKLGFLASSSVHVGTALLDFYAKCGDPQSARLIFDTIE 511
Query: 328 KRNSVSWSALLGVYCQNGDFEKVINIFRGM----EKIDLYSFGTVIRAC 371
++N+++WSA++G Y + GD + +F M +K + +F +++ AC
Sbjct: 512 EKNTITWSAMIGGYGKQGDTIGSLELFEEMLKKQQKPNESTFTSILSAC 556
BLAST of Cp4.1LG04g03350.1 vs. TAIR10
Match:
AT4G33990.1 (AT4G33990.1 Tetratricopeptide repeat (TPR)-like superfamily protein)
HSP 1 Score: 202.6 bits (514), Expect = 4.9e-52
Identity = 116/349 (33.24%), Postives = 194/349 (55.59%), Query Frame = 1
Query: 28 SQILQFCGSDLLHDALHTLNSLDSFDSTTNKSILYASLLQTCTKVASFTHGRQIHAHVLK 87
+ I +C S +AL N L + DS T SLL CT+ F G IH++ +K
Sbjct: 221 AMISGYCQSGNAKEALTLSNGLRAMDSVT-----VVSLLSACTEAGDFNRGVTIHSYSIK 280
Query: 88 SGLEADRFVGNSLLSLYFKLGSDFRLTRRVFDGLFVKDVVSWTSMITSYVREGKPGNAIE 147
GLE++ FV N L+ LY + G R ++VFD ++V+D++SW S+I +Y +P AI
Sbjct: 281 HGLESELFVSNKLIDLYAEFGR-LRDCQKVFDRMYVRDLISWNSIIKAYELNEQPLRAIS 340
Query: 148 LFWDMLDLGIEPNGFTLSAVIKACSEIGNLVLGRCFHGLVVRHG-FNSNHVIVSSLIDMY 207
LF +M I+P+ TL ++ S++G++ R G +R G F + I ++++ MY
Sbjct: 341 LFQEMRLSRIQPDCLTLISLASILSQLGDIRACRSVQGFTLRKGWFLEDITIGNAVVVMY 400
Query: 208 GRNFASSDARQLFDEMPEPDAICWTSVISALTRNDLYEDALGFFYLMLRTYSLSPDGFTF 267
+ AR +F+ +P D I W ++IS +N +A+ + +M ++ + T+
Sbjct: 401 AKLGLVDSARAVFNWLPNTDVISWNTIISGYAQNGFASEAIEMYNIMEEEGEIAANQGTW 460
Query: 268 GSVLTACANLGRLRQGEEVHAKVIAHGLGGNVVVESSLVDMYGKCGAVEKSQRVFDRMSK 327
SVL AC+ G LRQG ++H +++ +GL +V V +SL DMYGKCG +E + +F ++ +
Sbjct: 461 VSVLPACSQAGALRQGMKLHGRLLKNGLYLDVFVVTSLADMYGKCGRLEDALSLFYQIPR 520
Query: 328 RNSVSWSALLGVYCQNGDFEKVINIFRGM----EKIDLYSFGTVIRACA 372
NSV W+ L+ + +G EK + +F+ M K D +F T++ AC+
Sbjct: 521 VNSVPWNTLIACHGFHGHGEKAVMLFKEMLDEGVKPDHITFVTLLSACS 563
BLAST of Cp4.1LG04g03350.1 vs. TAIR10
Match:
AT4G18520.1 (AT4G18520.1 Pentatricopeptide repeat (PPR) superfamily protein)
HSP 1 Score: 199.5 bits (506), Expect = 4.1e-51
Identity = 106/311 (34.08%), Postives = 176/311 (56.59%), Query Frame = 1
Query: 64 SLLQTCTKVASFTHGRQIHAHVLKSGLEADRFVGNSLLSLYFKLGSDFRLTRRVFDGLFV 123
S+L+ C++ + GRQ+H+ V+K ++ D FVG SL+ +Y K G + R+VFDG+
Sbjct: 289 SILKACSEEKALRFGRQVHSLVVKRMIKTDVFVGTSLMDMYAKCG-EISDCRKVFDGMSN 348
Query: 124 KDVVSWTSMITSYVREGKPGNAIELFWDMLDLGIEPNGFTLSAVIKACSEIGNLVLGRCF 183
++ V+WTS+I ++ REG AI LF M + N T+ ++++AC +G L+LG+
Sbjct: 349 RNTVTWTSIIAAHAREGFGEEAISLFRIMKRRHLIANNLTVVSILRACGSVGALLLGKEL 408
Query: 184 HGLVVRHGFNSNHVIVSSLIDMYGRNFASSDARQLFDEMPEPDAICWTSVISALTRNDLY 243
H ++++ N I S+L+ +Y + S DA + ++P D + WT++IS +
Sbjct: 409 HAQIIKNSIEKNVYIGSTLVWLYCKCGESRDAFNVLQQLPSRDVVSWTAMISGCSSLGHE 468
Query: 244 EDALGFFYLMLRTYSLSPDGFTFGSVLTACANLGRLRQGEEVHAKVIAHGLGGNVVVESS 303
+AL F M++ + P+ FT+ S L ACAN L G +H+ + NV V S+
Sbjct: 469 SEALDFLKEMIQE-GVEPNPFTYSSALKACANSESLLIGRSIHSIAKKNHALSNVFVGSA 528
Query: 304 LVDMYGKCGAVEKSQRVFDRMSKRNSVSWSALLGVYCQNGDFEKVINIFRGME----KID 363
L+ MY KCG V ++ RVFD M ++N VSW A++ Y +NG + + + ME ++D
Sbjct: 529 LIHMYAKCGFVSEAFRVFDSMPEKNLVSWKAMIMGYARNGFCREALKLMYRMEAEGFEVD 588
Query: 364 LYSFGTVIRAC 371
Y F T++ C
Sbjct: 589 DYIFATILSTC 597
BLAST of Cp4.1LG04g03350.1 vs. NCBI nr
Match:
gi|449438472|ref|XP_004137012.1| (PREDICTED: pentatricopeptide repeat-containing protein At1g03540 [Cucumis sativus])
HSP 1 Score: 609.0 bits (1569), Expect = 6.4e-171
Identity = 299/373 (80.16%), Postives = 324/373 (86.86%), Query Frame = 1
Query: 1 MRLFIKRHCRS-FTSQNLKNSTHPPTKESQILQFCGSDLLHDALHTLNSLDSFDSTTNKS 60
M LF+KRHC S FTSQN K STHP K SQILQFC S LL+DALH LNS+D +DS NK
Sbjct: 1 MMLFLKRHCSSSFTSQNFKYSTHPSIKLSQILQFCKSGLLNDALHLLNSIDLYDSRINKP 60
Query: 61 ILYASLLQTCTKVASFTHGRQIHAHVLKSGLEADRFVGNSLLSLYFKLGSDFRLTRRVFD 120
+LYASLLQTC KV SFT GRQ HAHV+KSGLE DRFVGNSLLSLYFKLGSD LTRRVFD
Sbjct: 61 LLYASLLQTCIKVDSFTRGRQFHAHVVKSGLETDRFVGNSLLSLYFKLGSDSLLTRRVFD 120
Query: 121 GLFVKDVVSWTSMITSYVREGKPGNAIELFWDMLDLGIEPNGFTLSAVIKACSEIGNLVL 180
GLFVKDVVSW SMIT YVREGK G AIELFWDMLD GIEPNGFTLSAVIKACSEIGNLVL
Sbjct: 121 GLFVKDVVSWASMITGYVREGKSGIAIELFWDMLDSGIEPNGFTLSAVIKACSEIGNLVL 180
Query: 181 GRCFHGLVVRHGFNSNHVIVSSLIDMYGRNFASSDARQLFDEMPEPDAICWTSVISALTR 240
G+CFHG+VVR GF+SN VI+SSLIDMYGRN SSDARQLFDE+ EPD +CWT+VISA TR
Sbjct: 181 GKCFHGVVVRRGFDSNPVILSSLIDMYGRNSVSSDARQLFDELLEPDPVCWTTVISAFTR 240
Query: 241 NDLYEDALGFFYLMLRTYSLSPDGFTFGSVLTACANLGRLRQGEEVHAKVIAHGLGGNVV 300
NDLYE+ALGFFYL R + L PD +TFGSVLTAC NLGRLRQGEE+HAKVIA+G GNVV
Sbjct: 241 NDLYEEALGFFYLKHRAHRLCPDNYTFGSVLTACGNLGRLRQGEEIHAKVIAYGFSGNVV 300
Query: 301 VESSLVDMYGKCGAVEKSQRVFDRMSKRNSVSWSALLGVYCQNGDFEKVINIFRGMEKID 360
ESSLVDMYGKCGAVEKSQR+FDRMS RNSVSWSALL VYC NGD+EK +N+FR M+++D
Sbjct: 301 TESSLVDMYGKCGAVEKSQRLFDRMSNRNSVSWSALLAVYCHNGDYEKAVNLFREMKEVD 360
Query: 361 LYSFGTVIRACAG 373
LYSFGTVIRACAG
Sbjct: 361 LYSFGTVIRACAG 373
BLAST of Cp4.1LG04g03350.1 vs. NCBI nr
Match:
gi|659110665|ref|XP_008455346.1| (PREDICTED: pentatricopeptide repeat-containing protein At1g03540 [Cucumis melo])
HSP 1 Score: 605.5 bits (1560), Expect = 7.1e-170
Identity = 298/373 (79.89%), Postives = 325/373 (87.13%), Query Frame = 1
Query: 1 MRLFIKRHCRS-FTSQNLKNSTHPPTKESQILQFCGSDLLHDALHTLNSLDSFDSTTNKS 60
M LF KRHC S FTSQN K STH K QILQFC S LL+DALH LNS+D +DS NK
Sbjct: 1 MMLFFKRHCTSSFTSQNFKYSTHLSNKLFQILQFCKSGLLNDALHILNSVDLYDSRINKP 60
Query: 61 ILYASLLQTCTKVASFTHGRQIHAHVLKSGLEADRFVGNSLLSLYFKLGSDFRLTRRVFD 120
+LYASLLQTCTKV SF+ G Q HAHV+KSGLE DRFVGNSLLSLYFKLGS+ LTRRVFD
Sbjct: 61 LLYASLLQTCTKVDSFSSGCQFHAHVVKSGLETDRFVGNSLLSLYFKLGSNCLLTRRVFD 120
Query: 121 GLFVKDVVSWTSMITSYVREGKPGNAIELFWDMLDLGIEPNGFTLSAVIKACSEIGNLVL 180
GLFVKDVVSW SMIT YVREGK G AIELFWDMLD GIEPN FTLS VIKACSEIGNLVL
Sbjct: 121 GLFVKDVVSWASMITGYVREGKSGMAIELFWDMLDSGIEPNDFTLSTVIKACSEIGNLVL 180
Query: 181 GRCFHGLVVRHGFNSNHVIVSSLIDMYGRNFASSDARQLFDEMPEPDAICWTSVISALTR 240
G+CFHG+VVR GF+SN VI+SSLIDMYGRN+ SS+ARQLFDE+ EPD +CWT+VISA TR
Sbjct: 181 GKCFHGVVVRRGFDSNPVILSSLIDMYGRNYLSSEARQLFDELLEPDPVCWTTVISAFTR 240
Query: 241 NDLYEDALGFFYLMLRTYSLSPDGFTFGSVLTACANLGRLRQGEEVHAKVIAHGLGGNVV 300
ND YE+ALGFFYLM R Y LSPD +TFGSVLTAC NLGRL+QGEE+HAKVIA+G GGNVV
Sbjct: 241 NDFYEEALGFFYLMHRAYRLSPDNYTFGSVLTACGNLGRLKQGEEIHAKVIAYGFGGNVV 300
Query: 301 VESSLVDMYGKCGAVEKSQRVFDRMSKRNSVSWSALLGVYCQNGDFEKVINIFRGMEKID 360
VESSLVDMYGKCGAVEKSQRVFDRMS RNSVSWSALL VYCQNGDFEKV+++FR M+K+D
Sbjct: 301 VESSLVDMYGKCGAVEKSQRVFDRMSNRNSVSWSALLAVYCQNGDFEKVVSLFREMKKVD 360
Query: 361 LYSFGTVIRACAG 373
LYSFGTV+RACAG
Sbjct: 361 LYSFGTVLRACAG 373
BLAST of Cp4.1LG04g03350.1 vs. NCBI nr
Match:
gi|694332952|ref|XP_009357088.1| (PREDICTED: pentatricopeptide repeat-containing protein At1g03540 [Pyrus x bretschneideri])
HSP 1 Score: 562.0 bits (1447), Expect = 9.0e-157
Identity = 275/372 (73.92%), Postives = 313/372 (84.14%), Query Frame = 1
Query: 1 MRLFIKRHCRSFTSQNLKNSTHPPTKESQILQFCGSDLLHDALHTLNSLDSFDSTTNKSI 60
M+L KRHC S TS NL+N+ P +K+S+ILQ C LL DA+ LNS+DS + T K I
Sbjct: 1 MKLVFKRHCSSLTSFNLQNTKTPSSKQSKILQLCKLGLLSDAIRVLNSIDSGEITL-KPI 60
Query: 61 LYASLLQTCTKVASFTHGRQIHAHVLKSGLEADRFVGNSLLSLYFKLGSDFRLTRRVFDG 120
LYASLLQTCTKV SF HG Q+HAHV+KSGLE DRFVGNSLL+LYFKL + TRRVFDG
Sbjct: 61 LYASLLQTCTKVVSFNHGLQVHAHVVKSGLETDRFVGNSLLALYFKLVPNMSETRRVFDG 120
Query: 121 LFVKDVVSWTSMITSYVREGKPGNAIELFWDMLDLGIEPNGFTLSAVIKACSEIGNLVLG 180
LFVKDV+SWTSMIT YVR GKPGN+IE+FW+ML GIEPN FTLSAV+KACSE+G+L LG
Sbjct: 121 LFVKDVISWTSMITGYVRAGKPGNSIEMFWEMLKFGIEPNAFTLSAVVKACSEVGDLRLG 180
Query: 181 RCFHGLVVRHGFNSNHVIVSSLIDMYGRNFASSDARQLFDEMPEPDAICWTSVISALTRN 240
CFHG+V R GF+SN VIVS+LI MYGRN+ S DAR+LFDEM EP AICWTSVISA TR+
Sbjct: 181 LCFHGVVFRRGFDSNDVIVSALIYMYGRNYRSEDARRLFDEMSEPGAICWTSVISAFTRS 240
Query: 241 DLYEDALGFFYLMLRTYSLSPDGFTFGSVLTACANLGRLRQGEEVHAKVIAHGLGGNVVV 300
DL+E+ALGFFYLM R + LSPDGFTFG+VLTAC NLGRLRQG EVHAKVI +GL GNVVV
Sbjct: 241 DLFEEALGFFYLMQRNHGLSPDGFTFGTVLTACGNLGRLRQGREVHAKVITYGLYGNVVV 300
Query: 301 ESSLVDMYGKCGAVEKSQRVFDRMSKRNSVSWSALLGVYCQNGDFEKVINIFRGMEKIDL 360
ESSLVDMYGKCG+VE ++RVFDRMSK+NSVSWSALLGVYCQ GDFE V+ FR ME+ DL
Sbjct: 301 ESSLVDMYGKCGSVENARRVFDRMSKKNSVSWSALLGVYCQAGDFESVVKHFREMEETDL 360
Query: 361 YSFGTVIRACAG 373
YSFGTV+RACAG
Sbjct: 361 YSFGTVLRACAG 371
BLAST of Cp4.1LG04g03350.1 vs. NCBI nr
Match:
gi|595946318|ref|XP_007216136.1| (hypothetical protein PRUPE_ppa019108mg, partial [Prunus persica])
HSP 1 Score: 556.6 bits (1433), Expect = 3.8e-155
Identity = 274/372 (73.66%), Postives = 313/372 (84.14%), Query Frame = 1
Query: 1 MRLFIKRHCRSFTSQNLKNSTHPPTKESQILQFCGSDLLHDALHTLNSLDSFDSTTNKSI 60
M+L +KRHC S TS NL+++ P K+SQIL+ C LL DA+ LNS+DS + T K I
Sbjct: 1 MKLVLKRHCSSLTSLNLQSTKIPSPKQSQILRLCKLGLLSDAIRVLNSIDSGEITL-KPI 60
Query: 61 LYASLLQTCTKVASFTHGRQIHAHVLKSGLEADRFVGNSLLSLYFKLGSDFRLTRRVFDG 120
LYASLLQTCTK SF HG QIHAHV+KSGLE DRFVGNSLLSLYFKL + TRRVFDG
Sbjct: 61 LYASLLQTCTKAVSFNHGLQIHAHVVKSGLETDRFVGNSLLSLYFKLVPNMSETRRVFDG 120
Query: 121 LFVKDVVSWTSMITSYVREGKPGNAIELFWDMLDLGIEPNGFTLSAVIKACSEIGNLVLG 180
LFVKDV+SWTSMIT YVR GKPGN+IE+F+DML GIEPN FTLSAV+KACSEIG+L LG
Sbjct: 121 LFVKDVISWTSMITGYVRAGKPGNSIEVFYDMLKFGIEPNAFTLSAVVKACSEIGDLRLG 180
Query: 181 RCFHGLVVRHGFNSNHVIVSSLIDMYGRNFASSDARQLFDEMPEPDAICWTSVISALTRN 240
CFHG+VVR GF SNHVI+S+LI+MYGRN+ S DAR LFDE+ EP AICWTS+ISALTR+
Sbjct: 181 LCFHGVVVRRGFVSNHVIISALINMYGRNYRSEDARLLFDELTEPGAICWTSIISALTRS 240
Query: 241 DLYEDALGFFYLMLRTYSLSPDGFTFGSVLTACANLGRLRQGEEVHAKVIAHGLGGNVVV 300
DL+E+ALGFFYLM R + LSPDGFTFG+VL AC NLGRLRQG E+HAKVI +GL GNVVV
Sbjct: 241 DLFEEALGFFYLMHRYHGLSPDGFTFGTVLAACGNLGRLRQGREMHAKVITYGLCGNVVV 300
Query: 301 ESSLVDMYGKCGAVEKSQRVFDRMSKRNSVSWSALLGVYCQNGDFEKVINIFRGMEKIDL 360
ESSLVDMYGKCG+VE ++RVFDR+ K+NSVSWSALLGVYCQ GDFE VIN FR ME+ DL
Sbjct: 301 ESSLVDMYGKCGSVECARRVFDRIPKKNSVSWSALLGVYCQTGDFESVINHFREMEEADL 360
Query: 361 YSFGTVIRACAG 373
YSFGTV+RACAG
Sbjct: 361 YSFGTVLRACAG 371
BLAST of Cp4.1LG04g03350.1 vs. NCBI nr
Match:
gi|658041113|ref|XP_008356170.1| (PREDICTED: pentatricopeptide repeat-containing protein At1g03540-like [Malus domestica])
HSP 1 Score: 549.3 bits (1414), Expect = 6.0e-153
Identity = 273/372 (73.39%), Postives = 306/372 (82.26%), Query Frame = 1
Query: 1 MRLFIKRHCRSFTSQNLKNSTHPPTKESQILQFCGSDLLHDALHTLNSLDSFDSTTNKSI 60
M+L KRHC S TS NL+N+ P K+S+ILQ C LL DA+ LNS+DS + T K I
Sbjct: 25 MKLVFKRHCSSLTSXNLQNTKTPSPKQSKILQLCKLGLLPDAIRVLNSIDSGEITL-KPI 84
Query: 61 LYASLLQTCTKVASFTHGRQIHAHVLKSGLEADRFVGNSLLSLYFKLGSDFRLTRRVFDG 120
LYASLLQTCTK SF HG Q+HAHV+KSGLE DRFVGNSLL+LYFKL + TRRVFDG
Sbjct: 85 LYASLLQTCTKAVSFNHGLQVHAHVVKSGLETDRFVGNSLLALYFKLVPNMSETRRVFDG 144
Query: 121 LFVKDVVSWTSMITSYVREGKPGNAIELFWDMLDLGIEPNGFTLSAVIKACSEIGNLVLG 180
LFVKDV+SWTSMIT YVR GKPGN+IE FW+ML GIEPN FTLSAV+KACSEIG+L LG
Sbjct: 145 LFVKDVISWTSMITGYVRAGKPGNSIETFWEMLKFGIEPNAFTLSAVVKACSEIGDLRLG 204
Query: 181 RCFHGLVVRHGFNSNHVIVSSLIDMYGRNFASSDARQLFDEMPEPDAICWTSVISALTRN 240
CFHG+V R GF+SN VIVS+LI MYGRN S DAR+LFDEM EP ICWTSVISA TR+
Sbjct: 205 LCFHGVVFRRGFDSNDVIVSALIYMYGRNCRSEDARRLFDEMSEPGPICWTSVISAFTRS 264
Query: 241 DLYEDALGFFYLMLRTYSLSPDGFTFGSVLTACANLGRLRQGEEVHAKVIAHGLGGNVVV 300
DL+E+ALGFFYLM R + LSPDGFTFG+VLTAC NLGRLRQG EVHAKVI +GL GNVVV
Sbjct: 265 DLFEEALGFFYLMQRNHGLSPDGFTFGTVLTACGNLGRLRQGREVHAKVITYGLYGNVVV 324
Query: 301 ESSLVDMYGKCGAVEKSQRVFDRMSKRNSVSWSALLGVYCQNGDFEKVINIFRGMEKIDL 360
ESSLVDMYGKCG+VE + RVFDRMSK+NSVS SALLGVYCQ GDFE V+ FR ME+ DL
Sbjct: 325 ESSLVDMYGKCGSVENAXRVFDRMSKKNSVSRSALLGVYCQAGDFESVVKHFREMEEADL 384
Query: 361 YSFGTVIRACAG 373
YSFGTV+RACAG
Sbjct: 385 YSFGTVLRACAG 395
The following BLAST results are available for this feature:
Match Name | E-value | Identity | Description | |
PPR8_ARATH | 2.0e-124 | 59.68 | Pentatricopeptide repeat-containing protein At1g03540 OS=Arabidopsis thaliana GN... | [more] |
PP252_ARATH | 1.0e-51 | 33.01 | Pentatricopeptide repeat-containing protein At3g24000, mitochondrial OS=Arabidop... | [more] |
PP146_ARATH | 1.7e-51 | 32.38 | Pentatricopeptide repeat-containing protein At2g03380, mitochondrial OS=Arabidop... | [more] |
PP348_ARATH | 8.6e-51 | 33.24 | Pentatricopeptide repeat-containing protein At4g33990 OS=Arabidopsis thaliana GN... | [more] |
PP319_ARATH | 7.3e-50 | 34.08 | Pentatricopeptide repeat-containing protein At4g18520 OS=Arabidopsis thaliana GN... | [more] |
Match Name | E-value | Identity | Description | |
A0A0A0K5P0_CUCSA | 4.5e-171 | 80.16 | Uncharacterized protein OS=Cucumis sativus GN=Csa_7G047230 PE=4 SV=1 | [more] |
M5XE21_PRUPE | 2.6e-155 | 73.66 | Uncharacterized protein (Fragment) OS=Prunus persica GN=PRUPE_ppa019108mg PE=4 S... | [more] |
A0A061E2T1_THECC | 2.9e-146 | 69.89 | Pentatricopeptide repeat (PPR-like) superfamily protein OS=Theobroma cacao GN=TC... | [more] |
A0A067JXD0_JATCU | 1.1e-145 | 68.98 | Uncharacterized protein OS=Jatropha curcas GN=JCGZ_25836 PE=4 SV=1 | [more] |
B9RW53_RICCO | 1.3e-143 | 69.17 | Pentatricopeptide repeat-containing protein, putative OS=Ricinus communis GN=RCO... | [more] |
Match Name | E-value | Identity | Description | |
AT1G03540.1 | 1.1e-125 | 59.68 | Pentatricopeptide repeat (PPR-like) superfamily protein | [more] |
AT3G24000.1 | 5.7e-53 | 33.01 | Tetratricopeptide repeat (TPR)-like superfamily protein | [more] |
AT2G03380.1 | 9.8e-53 | 32.38 | Pentatricopeptide repeat (PPR) superfamily protein | [more] |
AT4G33990.1 | 4.9e-52 | 33.24 | Tetratricopeptide repeat (TPR)-like superfamily protein | [more] |
AT4G18520.1 | 4.1e-51 | 34.08 | Pentatricopeptide repeat (PPR) superfamily protein | [more] |