Cp4.1LG04g03280.1 (mRNA) Cucurbita pepo (Zucchini)
The following sequences are available for this feature:
Legend: CDS Hold the cursor over a type above to highlight its positions in the sequence below.ATGGGACGAGCTCCATGCTGTGATAAGAATGGCCTGAAAAAGGGTCCATGGACTCCTGAGGAAGATCAGAAGCTTGTTGGCTATATTCAAATTCATGGGCCTGGGAATTGGCGTAATCTTCCTAAAAAAGCTGGTGTGTTCTTGTTTGTTCTTGTGTGTTCTTGTTTGTTCTTGTGTGTTCTTGTTTGTTCTTGTTTGTGTGTTGAAATTTAAGAGCTGAAATGAAAAGTTGAGGCCTTTTTGTTGGGATGTTTCGTAGGACTTCAAAGATGTGGGAAAAGTTGTAGGCTTCGGTGGACTAATTATCTGAGACCTGATATCAAGAGAGGGAGGTTTTCTTTTGAGGAAGAAGAAACTATAATCCAATTGCATAGTGTCTTGGGAAACAAGTAAGATTAATCGTGTTTTTTTCTCTCTAAATTATGAACTCGGATGTAACAGCTCAGGTCTACCGCTAGCAAATATTGTCTTCTTTAAGGTTTTCTCTTATGGGTTTCCCTTCAAGATTTTAAAACGTGTCTATTAGTGAGAAGTTTTTACACCCTTGTAAAGAATGATTTGTTTTTTTCTCCAACTGATGTAAGATCTCACACTCGAAGGAGGATGGACACTAGGCAGTGTGCCAGCAAAAACACTGAGCCCCGAAGGAGGGTGGACACTAAGCGGTGTGCCACTGAGGACGCTGGGCCCCGAAAGAGTGTAGATTGTGAGATCCCACATCGATTGAAGAGGGGAATGAGTGTCAGCGAGGACGTTGGCCCCGAACGGGGGTGGATTGTGAGATCCCACATCGGTTGGAGAGATGAACAAAACATTTTTTTATATGGGTGTGGAAACCTCTCCCTAGTAGACGTGTTTTAAAACCTTTAGGGTAAGTCCGAAAAGGGAAAGCCCAAAGAGGACAATATATGATAGTGGTGGGTTTGGGCTGTGTTACACAGGAAACTTGTATGATGCTCACAAATGGTTGATTTTTGTTGTTGTCTTAGATGGTCAGCGATAGCAGCTCATTTACCTGGAAGAACAGATAACGAGATCAAAAACTACTGGAATACTCACATTAGAAAAAAACTCCTTCGAATGGGAATCGACCCAGTGACCCACACTCCACGGATCGATCTTCTCGACCTATCCTCCATCATCGCCACGGCCATCCGCAGCCACCCAATCCTCGGTCTCTCGACGTTATTAAACAACCAAGCTCAAGCTCTAAACCCTGAATCTCTAAGGCTAATTTCCACCCTCTTAGCCCTCAAACAAGAAGACCCAAATGCCAACAATTCCCATCTCCAAAATGAAGAACATGCTCAAATTCAAGCTCAAATGGACACATTATCACAACTCTTACAACCCAACGATGAAATCAATAATAACACAAACTCTTCAATGATACCCATCACAAACTTCGTTGAGTGCTCAAATTCTCAAGAAAATATGAACTTTTTAGCTTCAAATTTGAGTGGAGATGATGTTAATCATGTGTACGATGATGGCTTGAAACCTAAGGCTTCAGATTTTGGGTTTGAATCGGTTATAACAACGCCAAAATCAAGCCCCACGCCGTTGAATTCTTCATCAACTTGCATAAACAATAGCTGCAATGAGGATGAGAGAGACAGTTTTTGTAGTAATTTTTTGCAGTTTGAAATTCCTCAAGGCTTGGACTTTGCTGATTTCATGTAA ATGGGACGAGCTCCATGCTGTGATAAGAATGGCCTGAAAAAGGGTCCATGGACTCCTGAGGAAGATCAGAAGCTTGTTGGCTATATTCAAATTCATGGGCCTGGGAATTGGCGTAATCTTCCTAAAAAAGCTGGACTTCAAAGATGTGGGAAAAGTTGTAGGCTTCGGTGGACTAATTATCTGAGACCTGATATCAAGAGAGGGAGCCACCCAATCCTCGGTCTCTCGACGTTATTAAACAACCAAGCTCAAGCTCTAAACCCTGAATCTCTAAGGCTAATTTCCACCCTCTTAGCCCTCAAACAAGAAGACCCAAATGCCAACAATTCCCATCTCCAAAATGAAGAACATGCTCAAATTCAAGCTCAAATGGACACATTATCACAACTCTTACAACCCAACGATGAAATCAATAATAACACAAACTCTTCAATGATACCCATCACAAACTTCGTTGAGTGCTCAAATTCTCAAGAAAATATGAACTTTTTAGCTTCAAATTTGAGTGGAGATGATGTTAATCATGTGTACGATGATGGCTTGAAACCTAAGGCTTCAGATTTTGGGTTTGAATCGGTTATAACAACGCCAAAATCAAGCCCCACGCCGTTGAATTCTTCATCAACTTGCATAAACAATAGCTGCAATGAGGATGAGAGAGACAGTTTTTGTAGTAATTTTTTGCAGTTTGAAATTCCTCAAGGCTTGGACTTTGCTGATTTCATGTAA ATGGGACGAGCTCCATGCTGTGATAAGAATGGCCTGAAAAAGGGTCCATGGACTCCTGAGGAAGATCAGAAGCTTGTTGGCTATATTCAAATTCATGGGCCTGGGAATTGGCGTAATCTTCCTAAAAAAGCTGGACTTCAAAGATGTGGGAAAAGTTGTAGGCTTCGGTGGACTAATTATCTGAGACCTGATATCAAGAGAGGGAGCCACCCAATCCTCGGTCTCTCGACGTTATTAAACAACCAAGCTCAAGCTCTAAACCCTGAATCTCTAAGGCTAATTTCCACCCTCTTAGCCCTCAAACAAGAAGACCCAAATGCCAACAATTCCCATCTCCAAAATGAAGAACATGCTCAAATTCAAGCTCAAATGGACACATTATCACAACTCTTACAACCCAACGATGAAATCAATAATAACACAAACTCTTCAATGATACCCATCACAAACTTCGTTGAGTGCTCAAATTCTCAAGAAAATATGAACTTTTTAGCTTCAAATTTGAGTGGAGATGATGTTAATCATGTGTACGATGATGGCTTGAAACCTAAGGCTTCAGATTTTGGGTTTGAATCGGTTATAACAACGCCAAAATCAAGCCCCACGCCGTTGAATTCTTCATCAACTTGCATAAACAATAGCTGCAATGAGGATGAGAGAGACAGTTTTTGTAGTAATTTTTTGCAGTTTGAAATTCCTCAAGGCTTGGACTTTGCTGATTTCATGTAA MGRAPCCDKNGLKKGPWTPEEDQKLVGYIQIHGPGNWRNLPKKAGLQRCGKSCRLRWTNYLRPDIKRGSHPILGLSTLLNNQAQALNPESLRLISTLLALKQEDPNANNSHLQNEEHAQIQAQMDTLSQLLQPNDEINNNTNSSMIPITNFVECSNSQENMNFLASNLSGDDVNHVYDDGLKPKASDFGFESVITTPKSSPTPLNSSSTCINNSCNEDERDSFCSNFLQFEIPQGLDFADFM
BLAST of Cp4.1LG04g03280.1 vs. Swiss-Prot
Match: MYB4_ORYSJ (Myb-related protein Myb4 OS=Oryza sativa subsp. japonica GN=MYB4 PE=2 SV=2) HSP 1 Score: 132.9 bits (333), Expect = 4.8e-30 Identity = 69/135 (51.11%), Postives = 87/135 (64.44%), Query Frame = 1
BLAST of Cp4.1LG04g03280.1 vs. Swiss-Prot
Match: MYB06_ANTMA (Myb-related protein 306 OS=Antirrhinum majus GN=MYB306 PE=2 SV=1) HSP 1 Score: 127.5 bits (319), Expect = 2.0e-28 Identity = 59/92 (64.13%), Postives = 64/92 (69.57%), Query Frame = 1
BLAST of Cp4.1LG04g03280.1 vs. Swiss-Prot
Match: MYB34_ARATH (Transcription factor MYB34 OS=Arabidopsis thaliana GN=MYB34 PE=1 SV=1) HSP 1 Score: 124.4 bits (311), Expect = 1.7e-27 Identity = 58/108 (53.70%), Postives = 72/108 (66.67%), Query Frame = 1
BLAST of Cp4.1LG04g03280.1 vs. Swiss-Prot
Match: MYB80_ARATH (Transcription factor MYB80 OS=Arabidopsis thaliana GN=MYB80 PE=1 SV=1) HSP 1 Score: 121.7 bits (304), Expect = 1.1e-26 Identity = 53/88 (60.23%), Postives = 62/88 (70.45%), Query Frame = 1
BLAST of Cp4.1LG04g03280.1 vs. Swiss-Prot
Match: MYB32_ARATH (Transcription factor MYB32 OS=Arabidopsis thaliana GN=MYB32 PE=2 SV=1) HSP 1 Score: 121.3 bits (303), Expect = 1.4e-26 Identity = 53/88 (60.23%), Postives = 65/88 (73.86%), Query Frame = 1
BLAST of Cp4.1LG04g03280.1 vs. TrEMBL
Match: A0A0A0K293_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_7G046120 PE=4 SV=1) HSP 1 Score: 186.8 bits (473), Expect = 3.1e-44 Identity = 119/197 (60.41%), Postives = 144/197 (73.10%), Query Frame = 1
BLAST of Cp4.1LG04g03280.1 vs. TrEMBL
Match: V4W3V4_9ROSI (Uncharacterized protein OS=Citrus clementina GN=CICLE_v10017668mg PE=4 SV=1) HSP 1 Score: 154.8 bits (390), Expect = 1.3e-34 Identity = 68/92 (73.91%), Postives = 75/92 (81.52%), Query Frame = 1
BLAST of Cp4.1LG04g03280.1 vs. TrEMBL
Match: A0A067EX67_CITSI (Uncharacterized protein OS=Citrus sinensis GN=CISIN_1g035629mg PE=4 SV=1) HSP 1 Score: 154.8 bits (390), Expect = 1.3e-34 Identity = 68/92 (73.91%), Postives = 75/92 (81.52%), Query Frame = 1
BLAST of Cp4.1LG04g03280.1 vs. TrEMBL
Match: A0A022Q848_ERYGU (Uncharacterized protein OS=Erythranthe guttata GN=MIMGU_mgv1a019583mg PE=4 SV=1) HSP 1 Score: 152.5 bits (384), Expect = 6.5e-34 Identity = 118/310 (38.06%), Postives = 149/310 (48.06%), Query Frame = 1
BLAST of Cp4.1LG04g03280.1 vs. TrEMBL
Match: A0A067JN53_JATCU (MYB family protein OS=Jatropha curcas GN=JCGZ_25860 PE=4 SV=1) HSP 1 Score: 151.8 bits (382), Expect = 1.1e-33 Identity = 66/92 (71.74%), Postives = 74/92 (80.43%), Query Frame = 1
BLAST of Cp4.1LG04g03280.1 vs. TAIR10
Match: AT4G05100.1 (AT4G05100.1 myb domain protein 74) HSP 1 Score: 141.0 bits (354), Expect = 9.9e-34 Identity = 64/93 (68.82%), Postives = 73/93 (78.49%), Query Frame = 1
BLAST of Cp4.1LG04g03280.1 vs. TAIR10
Match: AT4G21440.1 (AT4G21440.1 MYB-like 102) HSP 1 Score: 139.8 bits (351), Expect = 2.2e-33 Identity = 64/92 (69.57%), Postives = 70/92 (76.09%), Query Frame = 1
BLAST of Cp4.1LG04g03280.1 vs. TAIR10
Match: AT5G15310.1 (AT5G15310.1 myb domain protein 16) HSP 1 Score: 138.7 bits (348), Expect = 4.9e-33 Identity = 68/115 (59.13%), Postives = 83/115 (72.17%), Query Frame = 1
BLAST of Cp4.1LG04g03280.1 vs. TAIR10
Match: AT4G28110.1 (AT4G28110.1 myb domain protein 41) HSP 1 Score: 137.9 bits (346), Expect = 8.3e-33 Identity = 70/169 (41.42%), Postives = 101/169 (59.76%), Query Frame = 1
BLAST of Cp4.1LG04g03280.1 vs. TAIR10
Match: AT3G02940.1 (AT3G02940.1 myb domain protein 107) HSP 1 Score: 137.5 bits (345), Expect = 1.1e-32 Identity = 60/88 (68.18%), Postives = 72/88 (81.82%), Query Frame = 1
BLAST of Cp4.1LG04g03280.1 vs. NCBI nr
Match: gi|659110693|ref|XP_008455362.1| (PREDICTED: transcription factor MYB39 [Cucumis melo]) HSP 1 Score: 199.1 bits (505), Expect = 8.6e-48 Identity = 125/197 (63.45%), Postives = 149/197 (75.63%), Query Frame = 1
BLAST of Cp4.1LG04g03280.1 vs. NCBI nr
Match: gi|449438470|ref|XP_004137011.1| (PREDICTED: transcription repressor MYB6-like [Cucumis sativus]) HSP 1 Score: 186.8 bits (473), Expect = 4.4e-44 Identity = 119/197 (60.41%), Postives = 144/197 (73.10%), Query Frame = 1
BLAST of Cp4.1LG04g03280.1 vs. NCBI nr
Match: gi|641836837|gb|KDO55797.1| (hypothetical protein CISIN_1g035629mg [Citrus sinensis]) HSP 1 Score: 154.8 bits (390), Expect = 1.9e-34 Identity = 68/92 (73.91%), Postives = 75/92 (81.52%), Query Frame = 1
BLAST of Cp4.1LG04g03280.1 vs. NCBI nr
Match: gi|568831103|ref|XP_006469819.1| (PREDICTED: transcription factor MYB35 [Citrus sinensis]) HSP 1 Score: 154.8 bits (390), Expect = 1.9e-34 Identity = 68/92 (73.91%), Postives = 75/92 (81.52%), Query Frame = 1
BLAST of Cp4.1LG04g03280.1 vs. NCBI nr
Match: gi|567910181|ref|XP_006447404.1| (hypothetical protein CICLE_v10017668mg [Citrus clementina]) HSP 1 Score: 154.8 bits (390), Expect = 1.9e-34 Identity = 68/92 (73.91%), Postives = 75/92 (81.52%), Query Frame = 1
The following BLAST results are available for this feature:
The following terms have been associated with this mRNA:
GO Assignments
This mRNA is annotated with the following GO terms.
This mRNA is a part of the following gene feature(s):
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Analysis Name: InterPro Annotations of Cucurbita pepo
Date Performed: 2017-12-02
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