Cp4.1LG01g01690.1 (mRNA) Cucurbita pepo (Zucchini) | Cucurbit Genomics Database (CuGenDB)

Overview


Name	Cp4.1LG01g01690.1
Type	mRNA
Organism	Cucurbita pepo (Cucurbita pepo (Zucchini))
Description	Sequence-specific DNA-binding transcription factor
Location	Cp4.1LG01 : 2887891 .. 2893113 (-)
Sequence length	1702

Genome Viewer

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

TGGGTTTTAGTTCTTTTTTGAGGTACACAATTTTGATATTTGGTACGGAATCACCTGGGCATTTTGTTTTGCCCCCCAAAACCATGAATTTTGGGCTTAAAGCTTCAATTTCTCTCTCTATCATCATCATCATATATGTGTATATATATATGTATCGATGCACATTTATTTATATAGTCGCTCAAAGTTTTCCCGAAATAACGAATTTCTGAAGACGGGATCTTCAATTCTGAATTTTTTCTTGGTACTTTTTTCTCAGTTTCTCTCTTTGATTCTTTGATAGTGACGGCGAAATCAGTGAAACCACACAGGGAAGCTTAGCTTATGGGTCGGCCTCCCAGCAATGGAGGCCCTGCCTTCCGTTTCACTGCTCCCGAGGTTTTTCTCCGCTTCTTCTTCTTCTACTTCCTCCGCTTTTGTTCGTTTTCTTTATCTGAATGATGCGTTTGTGATGCATGTTGATTTTGGTGCTGGAAATTTTTCTTAGCTCAATTTCTGTGTTTATTGGCTTGATTGTTTGTTGATTCTTGTGGTTGTTTTGTTCGTTTCATGGAGGGTTCTAATCGTGTTCTTCTGAACTGATTGACTGTTCTTCTGCTTTCTTTTTTGATTATTTTCCATTCCATTTCTTGTTCTACTGGTAATTGTGCTTTTCCCCTTTTGAATTTTGATGTCTGTTTCCTAATTACTGCATAGAGTTGATGCTGTGGTTAGTTTAGGTAGCTGCATGTAAATAAGAACTGTTGAAAGGGGGCTTGTGGGGCTTGTTGGATAGCGATAATTTGGAAGAAGAGTGTCCTTTTCGAGCTTGAGTTTTGACAAAATTTGTATAGATCTAATTCAATCTGCTAGAAGTTCATTAGTTTTGCTGCTGGATGCTGTTTATTCTACAAGGAATTGATAATGACTTTAATCAAATGAAGTTTTTATTGCTTGCTCTAAGGCTATTACTATAGTTCTTTCTTGACTTAGTACTCAGATAGGGTACGCTTCCTCGAAGCTGCTGGTGCTGTAACGTTCGGTTCTTATTTTGATTAAGGTTGCGGAGATGGAGGCTATACTGCAAGGACACAATAATACCATGCCGTCTCGGGAAGTTCTGGTTTCTCTTGCTGGGAAGTTCAGGTGGACATTCTACATTGCTTACTGTGACTTTTATATGATTTGAATTGCTCTTTTGGTGTAGAGAATAATTTGTTTATGTTGTTTGTAGTGAATCGGTCGAACGGAAAGGGAAGATTGCTGTGCAAATGAAGCAAGTATGGTGGCCGTACTTGACGTTTATATGATAGGTAATGGTGATTTACTAATTATTGTTGTTATTTTGTAGGTTTGGAATTGGTTCCAGAATAGGCGATATGCTATCAGAGCAAAGACAACAAAGGTTCCCGGAAAGTTGGCTGGCTCTCCAATTGTCCAAGTCGAGTCAACACCCCCGAGAAATGTGCCTCAAACCATAGTTGTTCCTGCTCCCACACTAGTAGGTATTAAAAAAATCGCTATGTTTTATCAATGTTTAAATATTTTCATTTTCTTATCCTTTTTTTTTCTCTTATCATATGTTTGTTATTAGCTTATTGTTACGAAATCTATCGTAGTAGTAGAATGGCATCTGCTAAACGCCTCTGTCTGGGCTAACATCATCATTTCAAAACTTTTCCTCTTTTCGTCGCTAGTCAGGTGAGGAGGTATATCTGGAAGCATGGGAGCTTTTATGGCCTTTAATCTTCATTTTAAGTACTGTTCTTATGAGATTTCTATGAAAAAACCAATTGCAAAGTGGCTGCTTGCAAGTTTCCTACGTTCAAAAGATCCTACTCTGTACAAAAAGAAGTTAGATGTTTTTTATAATGCCAGGGTTTATCGCACAAGTATTGTTTTTTCAATTGGAACGTATTGTTTATGGTATTCGAGCAAAAAGTTTGTATGGTGTAACAACCCAAGCCCATTGCTAGTAGATATTATCTGTTTTGGCCTGTTATGTATTGTTGTCAGCCTCACGGTTTTAAAGCGCGTCTACTAGGGAGGTTTCCATACCCTTATAAGGAATGTTTCATTTCCCTCTCCAACCAATGTGGGATCTCACAATCCACCCCTACCCCTAGGGGCTCAGCATCCTCACTAGCACACCGTCCGGTGTCTAGCTCTGATACCATTTGTAACATCTCAAATCTACCGCTAGTAGGTAGTGTCCGCTTTGACCCATTATGTATCATCGTTAGCCTCATGGTTTTAAATACATCTACTAGGGAGAGATTTCAACCCTCTTATAAGGAATGGTTTGTTCCCCTCTCCAACCAAGGTGAGATCTCACAATCTACTCCCCTTGGTGGCTCGGCGTCTTTGTTGGCACACCGCCTGGTGTCTGTGTCTAATATCATTTGTTGCCCAAGCCCACCACTAGTAGATATTGTTCTTGGCTCGTTACGTATCGCCGTTAACTTCACGGTTTTAAAATGTATCTACTAGGATGATGTTTCTATACCCTTATAAGGAATGCTTCGTTCCCATTTCCAACCAATGTGAGATCTTAGTCTTGATATACCTTATTCCATTATATTGTTGTAGTTAACTTAAATCTCCAAATATGTTATAAAAAGTATGAGAAATCGATGATAAATTGTTTTTCTGTAAATCATGGGCTGACCATGTTTATGGCCTGTGAAGAACCATAATCTTTAAAATGACATGGTGTGGAAAGATGTGAACCACAGATACATTAGTTTGGATAGCATGTGATTCTAGATTTGCTTTTTAAAGATGATTCATATTTAAACATGTTGGTATCAACTTCTTTTAATTTTTCATTCAATTTCTGTACCAAATTCCAGGACCCCTAAAGCGTGCTTCAGAAAATCCACTGTCGGAATTTGAAGCTAAATCTGGGAGGGATGGTGCATGGTTAGTATAGCTTGTCTTCTGCTTTAGGATGATAAACTTCTTCACGACAGGCGTAGATGATTGATTCTTTTAACTGTTCATGATATGTTTCAGGTATGACGTTGCTACCTTTTTATCCCATAGATCTGTGGAAAGTGGTGACCCGGTAATTCTGCACTCATTCCCTTGCACGCACGTTATTCTTCAACCTATTTTCTGATCAGTTATTCATGCTCGAATTATTTTGCTTTATGAAAACCGAACACGGAAGTATTAAGCCAAATAGTTCTTGTACGGCCGCTCTCTCCATTTATAGAAAAACATTACAGTTTGTGGTCTCTACTGTCTTGTACTGTGTTTGTGGGTTCAAGATCTTTTGGATCACATTCTCAATCCTATGAGTTTCTAAGTATTTTATGAGTTCTCGAAATATTTTGACTTGTGAGAGTTAATATTGCCCTGGATTTTTCTCCACCCAATCCTTTTCTCCTCACTACCTCTGAGTTTGCAACATCATATTGAATGTTAACCAACAACACCTTGTGTAACCGCCCAAGCCCACCGCTAGCGGATATGGTCCTTTTTGGGCTTTCCCTCAAGGTTTTTAAAACGCGTCTGCTAGGGAGAGGTTTCCACACCCTTATAAAGATGACTTCGTTCTCTTCCCCAACAAATGTGGAATCTCACACATTATTTGGCCAATATTTTTGTGTTTCTCTAAAATGCTCCAAGATATGTAGTTGATTGTAACTCAAAAGTTCATCTCCGATTCGTTTTTTCCGGTAGAACAAATGTTGGGGTAGTAGGGGTTTGATCCTTGAACTTCAAAGGAACGAGTAGATGCCTTAACCATTGGGCTATGCTTATGATTTGTAAAGATATCACATGCTTCGTTTTGTTTGCGTTCATCTGAGTCCCTGCATTGCCTAAAAATTGTTGTTTGCCAGGAAGTACTAGTTAGATTTGCTGGTTTTGGATCAGATGAGGATGAGTGGGTTAATGTCAGAAGGAACATTAGACCTCGTTCGCTACCTTGTGAATCTTCAGAATGTGTGGCAGTTCTTCCAGGCGACCTCATCTTATGCTTTCAGGTAAAAACTTTTATTTTCCCTTGAAGCGAGGCCTTTCCATCACCTTCTTGCTATCGATTCAGGATAATCTCGTTTACTAGATCTTTCGATATTGGACATAATTTCAGGAGGGTAAAGAGCAGGCACTTTACTTTGATGCCCATGTGCTTGATACACAAAGAAGACGACATGATGTACGAGGTTGTCGCTGCAGGTTTTTGGTCCGTTATGATCACGATCAATCTGAGGTGCGTATCTTGTTCATGAACGCAATACTGCATGAATTGTGATATGTTCATAAACGTCTAACTTAATCATGCACTCAACAAATGCTGTTTAGGATTCTATAATTGACTTGGCTTGCTCTAAATGAATGTTAGGAAATTGTTCAGTTGAGAAAGATTTGTCGTCGGCCTGAGACCGACCACAGGTTGCTACAGCTTCATGCTGTAAACGAAGCAGCATCGATGGAGCCCTCACGATCTGGCATGGATTCTGTACTGCTCAGTGGTCAGACGATAAGTTTCGAGGCAACCCAAAAGCTACTCAACAAGGATGCAACCATCGTTATACCAAATGCAAATGCAAATATAAATGTCCATGCCCAAACTAGTACTCAGGAAGCAAGGAATACAATAACTAACAGCGCCCCAGGCGTATTCAACGCTGGTAATCACGCAGGTAGCTCTGCTTCTCGAGCGGTATCATGACCAGCTCTGTGTCTGGTATGTCAGCAGACAATGTGTCTGAATGGGGAAGTTAGTTGATTATGGAAAAACTTCCTTCCATCAGTCTAATCTTAACCGAACCTATCAATTTAAAATTTTGCCCGACTCGTTTTTTTAGGATGAGTAAATACACAGTGAAGTCTGTTTTTGCCCCATGTTTCAAAGTGATAGCTACCCATCCACTTGCTGTGAATGCTGAACGTTCTCGACCGATGAAACATGCAGGAGCCACACCTCGATCGTAGTATCGAACAGGTCAGAGGCATCATCTCTCTTGTTTTACTTTTTTCTTCTCTGCTTAGCCAAGCCAAACCAAACCAAACCAAACCATGGCTCTACACTGATCATATATCTTACTGCTTAGTTTTCCCATAGAGCTTTGCTGATTACCAAATGTTACTAACGATATCGATGCACTCGACAAAGGGTTCTCTTCGAATCGTTAAATGCCATGTGAAAAACTGGACTTGTTTGTGTACCTTTGGCTGAAGGGCAGTCAACTTAATGCATTACAGGAACCTTTAGATATACGTTCTTTCTGTTCT

mRNA sequence

TGGGTTTTAGTTCTTTTTTGAGGTACACAATTTTGATATTTGTGACGGCGAAATCAGTGAAACCACACAGGGAAGCTTAGCTTATGGGTCGGCCTCCCAGCAATGGAGGCCCTGCCTTCCGTTTCACTGCTCCCGAGGTTGCGGAGATGGAGGCTATACTGCAAGGACACAATAATACCATGCCGTCTCGGGAAGTTCTGGTTTCTCTTGCTGGGAAGTTCAGTGAATCGGTCGAACGGAAAGGGAAGATTGCTGTGCAAATGAAGCAAGTTTGGAATTGGTTCCAGAATAGGCGATATGCTATCAGAGCAAAGACAACAAAGGTTCCCGGAAAGTTGGCTGGCTCTCCAATTGTCCAAGTCGAGTCAACACCCCCGAGAAATGTGCCTCAAACCATAGTTGTTCCTGCTCCCACACTAGTAGGACCCCTAAAGCGTGCTTCAGAAAATCCACTGTCGGAATTTGAAGCTAAATCTGGGAGGGATGGTGCATGGTATGACGTTGCTACCTTTTTATCCCATAGATCTGTGGAAAGTGGTGACCCGGAAGTACTAGTTAGATTTGCTGGTTTTGGATCAGATGAGGATGAGTGGGTTAATGTCAGAAGGAACATTAGACCTCGTTCGCTACCTTGTGAATCTTCAGAATGTGTGGCAGTTCTTCCAGGCGACCTCATCTTATGCTTTCAGGAGGGTAAAGAGCAGGCACTTTACTTTGATGCCCATGTGCTTGATACACAAAGAAGACGACATGATGTACGAGGTTGTCGCTGCAGGTTTTTGGTCCGTTATGATCACGATCAATCTGAGGAAATTGTTCAGTTGAGAAAGATTTGTCGTCGGCCTGAGACCGACCACAGGTTGCTACAGCTTCATGCTGTAAACGAAGCAGCATCGATGGAGCCCTCACGATCTGGCATGGATTCTGTACTGCTCAGTGGTCAGACGATAAGTTTCGAGGCAACCCAAAAGCTACTCAACAAGGATGCAACCATCGTTATACCAAATGCAAATGCAAATATAAATGTCCATGCCCAAACTAGTACTCAGGAAGCAAGGAATACAATAACTAACAGCGCCCCAGGCGTATTCAACGCTGGTAATCACGCAGGTAGCTCTGCTTCTCGAGCGGTATCATGACCAGCTCTGTGTCTGGTATGTCAGCAGACAATGTGTCTGAATGGGGAAGTTAGTTGATTATGGAAAAACTTCCTTCCATCAGTCTAATCTTAACCGAACCTATCAATTTAAAATTTTGCCCGACTCGTTTTTTTAGGATGAGTAAATACACAGTGAAGTCTGTTTTTGCCCCATGTTTCAAAGTGATAGCTACCCATCCACTTGCTGTGAATGCTGAACGTTCTCGACCGATGAAACATGCAGGAGCCACACCTCGATCGTAGTATCGAACAGGTCAGAGGCATCATCTCTCTTGTTTTACTTTTTTCTTCTCTGCTTAGCCAAGCCAAACCAAACCAAACCAAACCATGGCTCTACACTGATCATATATCTTACTGCTTAGTTTTCCCATAGAGCTTTGCTGATTACCAAATGTTACTAACGATATCGATGCACTCGACAAAGGGTTCTCTTCGAATCGTTAAATGCCATGTGAAAAACTGGACTTGTTTGTGTACCTTTGGCTGAAGGGCAGTCAACTTAATGCATTACAGGAACCTTTAGATATACGTTCTTTCTGTTCT

Coding sequence (CDS)

ATGGGTCGGCCTCCCAGCAATGGAGGCCCTGCCTTCCGTTTCACTGCTCCCGAGGTTGCGGAGATGGAGGCTATACTGCAAGGACACAATAATACCATGCCGTCTCGGGAAGTTCTGGTTTCTCTTGCTGGGAAGTTCAGTGAATCGGTCGAACGGAAAGGGAAGATTGCTGTGCAAATGAAGCAAGTTTGGAATTGGTTCCAGAATAGGCGATATGCTATCAGAGCAAAGACAACAAAGGTTCCCGGAAAGTTGGCTGGCTCTCCAATTGTCCAAGTCGAGTCAACACCCCCGAGAAATGTGCCTCAAACCATAGTTGTTCCTGCTCCCACACTAGTAGGACCCCTAAAGCGTGCTTCAGAAAATCCACTGTCGGAATTTGAAGCTAAATCTGGGAGGGATGGTGCATGGTATGACGTTGCTACCTTTTTATCCCATAGATCTGTGGAAAGTGGTGACCCGGAAGTACTAGTTAGATTTGCTGGTTTTGGATCAGATGAGGATGAGTGGGTTAATGTCAGAAGGAACATTAGACCTCGTTCGCTACCTTGTGAATCTTCAGAATGTGTGGCAGTTCTTCCAGGCGACCTCATCTTATGCTTTCAGGAGGGTAAAGAGCAGGCACTTTACTTTGATGCCCATGTGCTTGATACACAAAGAAGACGACATGATGTACGAGGTTGTCGCTGCAGGTTTTTGGTCCGTTATGATCACGATCAATCTGAGGAAATTGTTCAGTTGAGAAAGATTTGTCGTCGGCCTGAGACCGACCACAGGTTGCTACAGCTTCATGCTGTAAACGAAGCAGCATCGATGGAGCCCTCACGATCTGGCATGGATTCTGTACTGCTCAGTGGTCAGACGATAAGTTTCGAGGCAACCCAAAAGCTACTCAACAAGGATGCAACCATCGTTATACCAAATGCAAATGCAAATATAAATGTCCATGCCCAAACTAGTACTCAGGAAGCAAGGAATACAATAACTAACAGCGCCCCAGGCGTATTCAACGCTGGTAATCACGCAGGTAGCTCTGCTTCTCGAGCGGTATCATGA

Protein sequence

MGRPPSNGGPAFRFTAPEVAEMEAILQGHNNTMPSREVLVSLAGKFSESVERKGKIAVQMKQVWNWFQNRRYAIRAKTTKVPGKLAGSPIVQVESTPPRNVPQTIVVPAPTLVGPLKRASENPLSEFEAKSGRDGAWYDVATFLSHRSVESGDPEVLVRFAGFGSDEDEWVNVRRNIRPRSLPCESSECVAVLPGDLILCFQEGKEQALYFDAHVLDTQRRRHDVRGCRCRFLVRYDHDQSEEIVQLRKICRRPETDHRLLQLHAVNEAASMEPSRSGMDSVLLSGQTISFEATQKLLNKDATIVIPNANANINVHAQTSTQEARNTITNSAPGVFNAGNHAGSSASRAVS

Homology

[Close]

BLAST of Cp4.1LG01g01690.1 vs. Swiss-Prot
Match: SHH2_ARATH (Protein SAWADEE HOMEODOMAIN HOMOLOG 2 OS=Arabidopsis thaliana GN=SHH2 PE=2 SV=1)

HSP 1 Score: 378.3 bits (970), Expect = 9.4e-104
Identity = 200/340 (58.82%), Postives = 241/340 (70.88%), Query Frame = 1


Query: 1   MGRPPSNGGPAFRFTAPEVAEMEAILQGHNNTMPSREVLVSLAGKFSESVERKGKIAVQM 60
           MGRPPSNGGPAFRF  PEV EMEAIL  HN  MP R +L +LA KFSES ERKGK+ VQ 
Sbjct: 1   MGRPPSNGGPAFRFILPEVTEMEAILLQHNTAMPGRHILEALADKFSESPERKGKVVVQF 60

Query: 61  KQVWNWFQNRRYAIRAKTTKVPGKLAGSPIVQVEST-------PPRNVPQTI-------- 120
           KQ+WNWFQNRRYA+RA+  K PGKL  S + +++          P +VP+T         
Sbjct: 61  KQIWNWFQNRRYALRARGNKAPGKLNVSSMPRMDLPNQMRSVIQPLSVPKTTHMTGNLPG 120

Query: 121 VVPAPT---LVGPLKRASENPLSEFEAKSGRDGAWYDVATFLSHRSVESGDPEVLVRFAG 180
           + PAP+   + G ++  S+N   EFEAKS RDGAWYDV  FL+HR++E GDPEV VRFAG
Sbjct: 121 MTPAPSGSLVPGVMRSGSDNSYLEFEAKSARDGAWYDVQAFLAHRNLEIGDPEVQVRFAG 180

Query: 181 FGSDEDEWVNVRRNIRPRSLPCESSECVAVLPGDLILCFQEGKEQALYFDAHVLDTQRRR 240
           F  +EDEW+NV++++R RSLPCE+SECVAVL GDL+LCFQEGK+QALYFDA VLD QRRR
Sbjct: 181 FEVEEDEWINVKKHVRQRSLPCEASECVAVLAGDLVLCFQEGKDQALYFDAIVLDAQRRR 240

Query: 241 HDVRGCRCRFLVRYDHDQSEEIVQLRKICRRPETDHRLLQLH-AVNEAASMEPSR----- 300
           HDVRGCRCRFLVRY HDQSEEIV LRKICRRPETD+RL QLH AVN+ A+    +     
Sbjct: 241 HDVRGCRCRFLVRYSHDQSEEIVPLRKICRRPETDYRLQQLHNAVNDLANSNQHQIPALD 300

Query: 301 -SGMDSVLLSGQTISFEATQ----KLLNKDATIVIPNANA 312
            +    + L G T+   A +     L    AT+V P++NA
Sbjct: 301 AAAKTPLSLPGATVPIVAPESKDPSLSATPATLVQPSSNA 340

[Close]

BLAST of Cp4.1LG01g01690.1 vs. Swiss-Prot
Match: SHH1_ARATH (Protein SAWADEE HOMEODOMAIN HOMOLOG 1 OS=Arabidopsis thaliana GN=SHH1 PE=1 SV=1)

HSP 1 Score: 183.7 bits (465), Expect = 3.4e-45
Identity = 106/249 (42.57%), Postives = 150/249 (60.24%), Query Frame = 1


Query: 14  FTAPEVAEMEAILQGHNNTMPSREVLVSLAGKFSESVERKGKIAVQMKQVWNWFQNR-RY 73
           FT  E+ +ME + +   +    ++   ++A  FS SV R GK ++  KQV  WFQ + ++
Sbjct: 14  FTLSEIVDMENLYKELGDQSLHKDFCQTVASTFSCSVNRNGKSSITWKQVQIWFQEKLKH 73

Query: 74  AIRAKTTKVPGKLAGSPIVQVE-----STPPRNVPQTIVVPAPTLVGPLK-RASENPLSE 133
             + K+  +P     SP +Q+      S+   N      V   T V   K +AS+     
Sbjct: 74  QSQPKSKTLP-----SPPLQIHDLSNPSSYASNASNATFVGNSTFVQTRKGKASDLADLA 133

Query: 134 FEAKSGRDGAWYDVATFLSHRSVESGDPEVLVRFAGFGSDEDEWVNVRRNIRPRSLPCES 193
           FEAKS RD AWYDV++FL++R + +G+ EV VRF+GF +  DEWVNV+ ++R RS+P E 
Sbjct: 134 FEAKSARDYAWYDVSSFLTYRVLRTGELEVRVRFSGFDNRHDEWVNVKTSVRERSIPVEP 193

Query: 194 SECVAVLPGDLILCFQEGKEQALYFDAHVLDTQRRRHDVRGCRCRFLVRYDHDQSEEIVQ 253
           SEC  V  GDL+LCFQE ++QALY D HVL+ +R  HD   C C FLVRY+ D +EE + 
Sbjct: 194 SECGRVNVGDLLLCFQEREDQALYCDGHVLNIKRGIHDHARCNCVFLVRYELDNTEESLG 253

Query: 254 LRKICRRPE 256
           L +ICRRPE
Sbjct: 254 LERICRRPE 257

[Close]

BLAST of Cp4.1LG01g01690.1 vs. TrEMBL
Match: A0A0A0LC67_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_3G236580 PE=4 SV=1)

HSP 1 Score: 585.5 bits (1508), Expect = 4.3e-164
Identity = 297/346 (85.84%), Postives = 316/346 (91.33%), Query Frame = 1


Query: 1   MGRPPSNGGPAFRFTAPEVAEMEAILQGHNNTMPSREVLVSLAGKFSESVERKGKIAVQM 60
           MGRPPSNGGPAFRFTA EVAEMEAILQGHNNTMP+REVLV+LA KFSESVERKGKIAVQM
Sbjct: 1   MGRPPSNGGPAFRFTASEVAEMEAILQGHNNTMPAREVLVALADKFSESVERKGKIAVQM 60

Query: 61  KQVWNWFQNRRYAIRAKTTKVPGKLAGSPIVQVESTPPRNVPQTIVVPAPTLVGPLKRAS 120
           K      QNRRYAIRAKT+K PGKLA SP+VQ+ESTP RNVPQT+VVPAP  VG  K A 
Sbjct: 61  K------QNRRYAIRAKTSKAPGKLAVSPVVQIESTPVRNVPQTVVVPAPAPVGSAKGAP 120

Query: 121 ENPLSEFEAKSGRDGAWYDVATFLSHRSVESGDPEVLVRFAGFGSDEDEWVNVRRNIRPR 180
           ENPLSEFEAKSGRDGAWYDVATFLSHRSVESGDPEVLVRF+GFGS+EDEWVN+RRNIRPR
Sbjct: 121 ENPLSEFEAKSGRDGAWYDVATFLSHRSVESGDPEVLVRFSGFGSEEDEWVNIRRNIRPR 180

Query: 181 SLPCESSECVAVLPGDLILCFQEGKEQALYFDAHVLDTQRRRHDVRGCRCRFLVRYDHDQ 240
           SLPCESSECVAVLPGDLILCFQEGKEQALYFDAHVLDTQRRRHDVRGCRCRFLVRYDHDQ
Sbjct: 181 SLPCESSECVAVLPGDLILCFQEGKEQALYFDAHVLDTQRRRHDVRGCRCRFLVRYDHDQ 240

Query: 241 SEEIVQLRKICRRPETDHRLLQLHAVNEAASMEPSRSGMDSVLLSGQTISFEATQKLLNK 300
           SEEIVQLRKICRRPETD+RL QLHAVNEAAS+EPS+SGMDSVLLSGQ I+FE +Q  L+K
Sbjct: 241 SEEIVQLRKICRRPETDYRLQQLHAVNEAASIEPSKSGMDSVLLSGQRINFETSQNPLSK 300

Query: 301 DATIVIPNANANINVHAQTSTQEARNTITNSAPGVFNAGNHAGSSA 347
           DA +VIPNAN +IN HAQTSTQEARNT TN+AP  FN+ N AGSSA
Sbjct: 301 DAALVIPNANPHINAHAQTSTQEARNTETNTAPTTFNSANLAGSSA 340

[Close]

BLAST of Cp4.1LG01g01690.1 vs. TrEMBL
Match: M5WG16_PRUPE (Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa007389mg PE=4 SV=1)

HSP 1 Score: 457.2 bits (1175), Expect = 1.8e-125
Identity = 246/359 (68.52%), Postives = 278/359 (77.44%), Query Frame = 1


Query: 1   MGRPPSNGGPAFRFTAPEVAEMEAILQGHNNTMPSREVLVSLAGKFSESVERKGKIAVQM 60
           MGRPPSNGGPAFRFT  EV+EMEAILQ HNNTMP+REVLV+LA KFSES ERKGKIAVQM
Sbjct: 1   MGRPPSNGGPAFRFTQSEVSEMEAILQQHNNTMPAREVLVALADKFSESAERKGKIAVQM 60

Query: 61  KQVWNWFQNRRYAIRAKTTKVPGKLAGSPIVQVESTPPRNVPQ---TIVVP--APTLVGP 120
           KQVWNWFQNRRYAIRAK++KV GKL  SP+ + +S P RNVPQ    I  P  AP+  G 
Sbjct: 61  KQVWNWFQNRRYAIRAKSSKVLGKLNVSPMSRDDSNPVRNVPQGPQPIAAPIHAPSAQGS 120

Query: 121 LKRASENPLSEFEAKSGRDGAWYDVATFLSHRSVESGDPEVLVRFAGFGSDEDEWVNVRR 180
            K ASEN + EFEAKSGRDGAWYDVA FLSHR +E+GDPEVLVRFAGFG +EDEWVNVR+
Sbjct: 121 GKGASENSIFEFEAKSGRDGAWYDVANFLSHRYLETGDPEVLVRFAGFGPEEDEWVNVRK 180

Query: 181 NIRPRSLPCESSECVAVLPGDLILCFQEGKEQALYFDAHVLDTQRRRHDVRGCRCRFLVR 240
           ++R RSLPCESSECVAVLPGDLILCFQEGKEQALYFDAHVLD QRRRHDVRGCRCRFLVR
Sbjct: 181 HVRQRSLPCESSECVAVLPGDLILCFQEGKEQALYFDAHVLDAQRRRHDVRGCRCRFLVR 240

Query: 241 YDHDQSEEIVQLRKICRRPETDHRLLQLHAVNEAASMEPSRSGMDSVLLSGQTISFEATQ 300
           Y HDQSEEIV LRK+CRRPETD+RL QLHAVNEAAS E  +  MD  +  G   S E  Q
Sbjct: 241 YVHDQSEEIVPLRKVCRRPETDYRLQQLHAVNEAASAE--QKSMDHFM--GSVTSAEMMQ 300

Query: 301 KLLNKDATIVIPNANANINVHAQTSTQEAR----NTITNSAPGVFNAGNHAGSSASRAV 351
           K  N DA    P  +AN ++  Q++T E +    +T+ +S    F  G+   +S +  V
Sbjct: 301 KQQNTDAASAPPVLHANASLATQSTTPEFKGSEVSTVISSGNSNFPPGSAVITSGTATV 355

[Close]

BLAST of Cp4.1LG01g01690.1 vs. TrEMBL
Match: W9RI10_9ROSA (Uncharacterized protein OS=Morus notabilis GN=L484_012170 PE=4 SV=1)

HSP 1 Score: 454.5 bits (1168), Expect = 1.2e-124
Identity = 239/350 (68.29%), Postives = 269/350 (76.86%), Query Frame = 1


Query: 1   MGRPPSNGGPAFRFTAPEVAEMEAILQGHNNTMPSREVLVSLAGKFSESVERKGKIAVQM 60
           MGRPP NGGPAFRFTA EVAEMEAILQ HNNTMP+RE+LV LA KFSESVERKGKI VQM
Sbjct: 1   MGRPPGNGGPAFRFTASEVAEMEAILQEHNNTMPAREILVDLADKFSESVERKGKIMVQM 60

Query: 61  KQVWNWFQNRRYAIRAKTTKVPGKLAGSPIVQVESTPPRNVPQTIVVPAPTLVGPLKRAS 120
           KQVWNWFQNRRYAIRAK ++  G L+ S + + + TP RNVPQ I  P P   G  + AS
Sbjct: 61  KQVWNWFQNRRYAIRAKLSRNLGMLSVSSMPRDDPTPVRNVPQAITAPIPAPSGTGRGAS 120

Query: 121 ENPLSEFEAKSGRDGAWYDVATFLSHRSVESGDPEVLVRFAGFGSDEDEWVNVRRNIRPR 180
           EN + EFEAKSGRDGAWYDVA F SHR +ESGDPEVLVRF GFG ++DEWVN+R+++R R
Sbjct: 121 ENSIMEFEAKSGRDGAWYDVANFFSHRYLESGDPEVLVRFVGFGPEDDEWVNIRKHVRQR 180

Query: 181 SLPCESSECVAVLPGDLILCFQEGKEQALYFDAHVLDTQRRRHDVRGCRCRFLVRYDHDQ 240
           SLPCESSECVAVLPGDLILCFQEGKEQALYFDAHVLD QRRRHDVRGCRCRFLVRYDHDQ
Sbjct: 181 SLPCESSECVAVLPGDLILCFQEGKEQALYFDAHVLDAQRRRHDVRGCRCRFLVRYDHDQ 240

Query: 241 SEEIVQLRKICRRPETDHRLLQLHAVNEAASMEPSRSGMDSVLLSG--QTISFEATQKLL 300
           SEEIV LRK+CRRPETD+RL QL+AVNEAAS E  +S  D+    G    IS E T KL 
Sbjct: 241 SEEIVPLRKVCRRPETDYRLQQLYAVNEAASAEQQKSSTDNFGGGGFRARISAETTPKLQ 300

Query: 301 NKDATIVIPNANANINVHAQTSTQEARNT-ITNSAPGVFNAGNHAGSSAS 348
           + DA +V P  +A   +  + S  E +   I N    V +AGN    +AS
Sbjct: 301 HADAALVAPALHATAALATKASILEPKKVEIVNV---VVDAGNSNNVTAS 347

[Close]

BLAST of Cp4.1LG01g01690.1 vs. TrEMBL
Match: A0A0B2PMB5_GLYSO (Uncharacterized protein OS=Glycine soja GN=glysoja_048524 PE=4 SV=1)

HSP 1 Score: 443.4 bits (1139), Expect = 2.7e-121
Identity = 224/330 (67.88%), Postives = 258/330 (78.18%), Query Frame = 1


Query: 1   MGRPPSNGGPAFRFTAPEVAEMEAILQGHNNTMPSREVLVSLAGKFSESVERKGKIAVQM 60
           MGRPPSNGGPAFRFT PEVAEMEAILQ HNN MPSR+VL +LA KFSES +RKGKIAVQM
Sbjct: 1   MGRPPSNGGPAFRFTQPEVAEMEAILQEHNNAMPSRDVLTTLAEKFSESQDRKGKIAVQM 60

Query: 61  KQVWNWFQNRRYAIRAKTTKVPGKLAGSPIVQVE--STPPRNVPQ---TIVVPAPTLVGP 120
           KQVWNWFQN+RYAIRAK++K PGKL  +P+ + +  STP R++PQ      +PA +   P
Sbjct: 61  KQVWNWFQNKRYAIRAKSSKTPGKLNITPMPRDDYNSTPIRSMPQQPTAAPIPAASATVP 120

Query: 121 --LKRASENPLSEFEAKSGRDGAWYDVATFLSHRSVESGDPEVLVRFAGFGSDEDEWVNV 180
             +K   EN + EFEAKSGRDGAWYDVATFLSHR +E+ DPEVLVRFAGFG +EDEW+N+
Sbjct: 121 TAVKATPENSVLEFEAKSGRDGAWYDVATFLSHRYLETSDPEVLVRFAGFGPEEDEWINI 180

Query: 181 RRNIRPRSLPCESSECVAVLPGDLILCFQEGKEQALYFDAHVLDTQRRRHDVRGCRCRFL 240
           R+++RPRSLPCESSECV V+PGDLILCFQEGKEQALYFDAHVLD QRRRHDVRGCRCRFL
Sbjct: 181 RKHVRPRSLPCESSECVVVIPGDLILCFQEGKEQALYFDAHVLDAQRRRHDVRGCRCRFL 240

Query: 241 VRYDHDQSEEIVQLRKICRRPETDHRLLQLHAVNEAASMEPSRSGMDSV----LLSGQTI 300
           VRYDHDQSEEIV LRKICRRPETD+RL QLHAVNEAA M+  ++GMD       +   T 
Sbjct: 241 VRYDHDQSEEIVPLRKICRRPETDYRLQQLHAVNEAAPMDQQKTGMDPAANVNAVRATTT 300

Query: 301 SFEATQKLLNKDATIVIPNANANINVHAQT 320
              A    +    T  +P      N+H +T
Sbjct: 301 ETAANVNAVRATTTETVPKQLIAANIHMET 330

[Close]

BLAST of Cp4.1LG01g01690.1 vs. TrEMBL
Match: A0A0R0H5Q7_SOYBN (Uncharacterized protein OS=Glycine max GN=GLYMA_12G158000 PE=4 SV=1)

HSP 1 Score: 443.4 bits (1139), Expect = 2.7e-121
Identity = 224/330 (67.88%), Postives = 258/330 (78.18%), Query Frame = 1


Query: 1   MGRPPSNGGPAFRFTAPEVAEMEAILQGHNNTMPSREVLVSLAGKFSESVERKGKIAVQM 60
           MGRPPSNGGPAFRFT PEVAEMEAILQ HNN MPSR+VL +LA KFSES +RKGKIAVQM
Sbjct: 1   MGRPPSNGGPAFRFTQPEVAEMEAILQEHNNAMPSRDVLTTLAEKFSESQDRKGKIAVQM 60

Query: 61  KQVWNWFQNRRYAIRAKTTKVPGKLAGSPIVQVE--STPPRNVPQ---TIVVPAPTLVGP 120
           KQVWNWFQN+RYAIRAK++K PGKL  +P+ + +  STP R++PQ      +PA +   P
Sbjct: 61  KQVWNWFQNKRYAIRAKSSKTPGKLNITPMPRDDYNSTPIRSMPQQPTAAPIPAASATVP 120

Query: 121 --LKRASENPLSEFEAKSGRDGAWYDVATFLSHRSVESGDPEVLVRFAGFGSDEDEWVNV 180
             +K   EN + EFEAKSGRDGAWYDVATFLSHR +E+ DPEVLVRFAGFG +EDEW+N+
Sbjct: 121 TAVKATPENSVLEFEAKSGRDGAWYDVATFLSHRYLETSDPEVLVRFAGFGPEEDEWINI 180

Query: 181 RRNIRPRSLPCESSECVAVLPGDLILCFQEGKEQALYFDAHVLDTQRRRHDVRGCRCRFL 240
           R+++RPRSLPCESSECV V+PGDLILCFQEGKEQALYFDAHVLD QRRRHDVRGCRCRFL
Sbjct: 181 RKHVRPRSLPCESSECVVVIPGDLILCFQEGKEQALYFDAHVLDAQRRRHDVRGCRCRFL 240

Query: 241 VRYDHDQSEEIVQLRKICRRPETDHRLLQLHAVNEAASMEPSRSGMDSV----LLSGQTI 300
           VRYDHDQSEEIV LRKICRRPETD+RL QLHAVNEAA M+  ++GMD       +   T 
Sbjct: 241 VRYDHDQSEEIVPLRKICRRPETDYRLQQLHAVNEAAPMDQQKTGMDPAANVNAVRATTT 300

Query: 301 SFEATQKLLNKDATIVIPNANANINVHAQT 320
              A    +    T  +P      N+H +T
Sbjct: 301 ETAANVNAVRATTTETVPKQLIAANIHMET 330

[Close]

BLAST of Cp4.1LG01g01690.1 vs. TAIR10
Match: AT3G18380.2 (AT3G18380.2 sequence-specific DNA binding transcription factors;sequence-specific DNA binding)

HSP 1 Score: 373.6 bits (958), Expect = 1.3e-103
Identity = 200/341 (58.65%), Postives = 241/341 (70.67%), Query Frame = 1


Query: 1   MGRPPSNGGPAFRFTAPEVAEMEAILQGHNNTMPSREVLVSLAGKFSESVERKGKIAVQM 60
           MGRPPSNGGPAFRF  PEV EMEAIL  HN  MP R +L +LA KFSES ERKGK+ VQ 
Sbjct: 1   MGRPPSNGGPAFRFILPEVTEMEAILLQHNTAMPGRHILEALADKFSESPERKGKVVVQF 60

Query: 61  KQVWNWFQNRRYAIRAKTTKVPGKLAGSPIVQVEST-------PPRNVPQTI-------- 120
           KQ+WNWFQNRRYA+RA+  K PGKL  S + +++          P +VP+T         
Sbjct: 61  KQIWNWFQNRRYALRARGNKAPGKLNVSSMPRMDLPNQMRSVIQPLSVPKTTHMTGNLPG 120

Query: 121 VVPAPT---LVGPLKRASENPLSEFEAKSGRDGAWYDVATFLSHRSVESGDPEVLVRFAG 180
           + PAP+   + G ++  S+N   EFEAKS RDGAWYDV  FL+HR++E GDPEV VRFAG
Sbjct: 121 MTPAPSGSLVPGVMRSGSDNSYLEFEAKSARDGAWYDVQAFLAHRNLEIGDPEVQVRFAG 180

Query: 181 FGSDEDEWVNVRRNIRPRSLPCESSECVAVLPGDLILCFQEGKEQALYFDAHVLDTQRRR 240
           F  +EDEW+NV++++R RSLPCE+SECVAVL GDL+LCFQEGK+QALYFDA VLD QRRR
Sbjct: 181 FEVEEDEWINVKKHVRQRSLPCEASECVAVLAGDLVLCFQEGKDQALYFDAIVLDAQRRR 240

Query: 241 HDVRGCRCRFLVRYDHDQSE-EIVQLRKICRRPETDHRLLQLH-AVNEAASMEPSR---- 300
           HDVRGCRCRFLVRY HDQSE EIV LRKICRRPETD+RL QLH AVN+ A+    +    
Sbjct: 241 HDVRGCRCRFLVRYSHDQSEQEIVPLRKICRRPETDYRLQQLHNAVNDLANSNQHQIPAL 300

Query: 301 --SGMDSVLLSGQTISFEATQ----KLLNKDATIVIPNANA 312
             +    + L G T+   A +     L    AT+V P++NA
Sbjct: 301 DAAAKTPLSLPGATVPIVAPESKDPSLSATPATLVQPSSNA 341

[Close]

BLAST of Cp4.1LG01g01690.1 vs. TAIR10
Match: AT1G15215.2 (AT1G15215.2 BEST Arabidopsis thaliana protein match is: sequence-specific DNA binding transcription factors;sequence-specific DNA binding (TAIR:AT3G18380.1))

HSP 1 Score: 183.7 bits (465), Expect = 1.9e-46
Identity = 106/249 (42.57%), Postives = 150/249 (60.24%), Query Frame = 1


Query: 14  FTAPEVAEMEAILQGHNNTMPSREVLVSLAGKFSESVERKGKIAVQMKQVWNWFQNR-RY 73
           FT  E+ +ME + +   +    ++   ++A  FS SV R GK ++  KQV  WFQ + ++
Sbjct: 14  FTLSEIVDMENLYKELGDQSLHKDFCQTVASTFSCSVNRNGKSSITWKQVQIWFQEKLKH 73

Query: 74  AIRAKTTKVPGKLAGSPIVQVE-----STPPRNVPQTIVVPAPTLVGPLK-RASENPLSE 133
             + K+  +P     SP +Q+      S+   N      V   T V   K +AS+     
Sbjct: 74  QSQPKSKTLP-----SPPLQIHDLSNPSSYASNASNATFVGNSTFVQTRKGKASDLADLA 133

Query: 134 FEAKSGRDGAWYDVATFLSHRSVESGDPEVLVRFAGFGSDEDEWVNVRRNIRPRSLPCES 193
           FEAKS RD AWYDV++FL++R + +G+ EV VRF+GF +  DEWVNV+ ++R RS+P E 
Sbjct: 134 FEAKSARDYAWYDVSSFLTYRVLRTGELEVRVRFSGFDNRHDEWVNVKTSVRERSIPVEP 193

Query: 194 SECVAVLPGDLILCFQEGKEQALYFDAHVLDTQRRRHDVRGCRCRFLVRYDHDQSEEIVQ 253
           SEC  V  GDL+LCFQE ++QALY D HVL+ +R  HD   C C FLVRY+ D +EE + 
Sbjct: 194 SECGRVNVGDLLLCFQEREDQALYCDGHVLNIKRGIHDHARCNCVFLVRYELDNTEESLG 253

Query: 254 LRKICRRPE 256
           L +ICRRPE
Sbjct: 254 LERICRRPE 257

[Close]

BLAST of Cp4.1LG01g01690.1 vs. NCBI nr
Match: gi|778680368|ref|XP_011651298.1| (PREDICTED: protein SAWADEE HOMEODOMAIN HOMOLOG 2 isoform X1 [Cucumis sativus])

HSP 1 Score: 608.6 bits (1568), Expect = 6.9e-171
Identity = 303/346 (87.57%), Postives = 322/346 (93.06%), Query Frame = 1


Query: 1   MGRPPSNGGPAFRFTAPEVAEMEAILQGHNNTMPSREVLVSLAGKFSESVERKGKIAVQM 60
           MGRPPSNGGPAFRFTA EVAEMEAILQGHNNTMP+REVLV+LA KFSESVERKGKIAVQM
Sbjct: 1   MGRPPSNGGPAFRFTASEVAEMEAILQGHNNTMPAREVLVALADKFSESVERKGKIAVQM 60

Query: 61  KQVWNWFQNRRYAIRAKTTKVPGKLAGSPIVQVESTPPRNVPQTIVVPAPTLVGPLKRAS 120
           KQVWNWFQNRRYAIRAKT+K PGKLA SP+VQ+ESTP RNVPQT+VVPAP  VG  K A 
Sbjct: 61  KQVWNWFQNRRYAIRAKTSKAPGKLAVSPVVQIESTPVRNVPQTVVVPAPAPVGSAKGAP 120

Query: 121 ENPLSEFEAKSGRDGAWYDVATFLSHRSVESGDPEVLVRFAGFGSDEDEWVNVRRNIRPR 180
           ENPLSEFEAKSGRDGAWYDVATFLSHRSVESGDPEVLVRF+GFGS+EDEWVN+RRNIRPR
Sbjct: 121 ENPLSEFEAKSGRDGAWYDVATFLSHRSVESGDPEVLVRFSGFGSEEDEWVNIRRNIRPR 180

Query: 181 SLPCESSECVAVLPGDLILCFQEGKEQALYFDAHVLDTQRRRHDVRGCRCRFLVRYDHDQ 240
           SLPCESSECVAVLPGDLILCFQEGKEQALYFDAHVLDTQRRRHDVRGCRCRFLVRYDHDQ
Sbjct: 181 SLPCESSECVAVLPGDLILCFQEGKEQALYFDAHVLDTQRRRHDVRGCRCRFLVRYDHDQ 240

Query: 241 SEEIVQLRKICRRPETDHRLLQLHAVNEAASMEPSRSGMDSVLLSGQTISFEATQKLLNK 300
           SEEIVQLRKICRRPETD+RL QLHAVNEAAS+EPS+SGMDSVLLSGQ I+FE +Q  L+K
Sbjct: 241 SEEIVQLRKICRRPETDYRLQQLHAVNEAASIEPSKSGMDSVLLSGQRINFETSQNPLSK 300

Query: 301 DATIVIPNANANINVHAQTSTQEARNTITNSAPGVFNAGNHAGSSA 347
           DA +VIPNAN +IN HAQTSTQEARNT TN+AP  FN+ N AGSSA
Sbjct: 301 DAALVIPNANPHINAHAQTSTQEARNTETNTAPTTFNSANLAGSSA 346

[Close]

BLAST of Cp4.1LG01g01690.1 vs. NCBI nr
Match: gi|659111991|ref|XP_008456010.1| (PREDICTED: protein SAWADEE HOMEODOMAIN HOMOLOG 2 isoform X1 [Cucumis melo])

HSP 1 Score: 605.5 bits (1560), Expect = 5.8e-170
Identity = 299/341 (87.68%), Postives = 318/341 (93.26%), Query Frame = 1


Query: 1   MGRPPSNGGPAFRFTAPEVAEMEAILQGHNNTMPSREVLVSLAGKFSESVERKGKIAVQM 60
           MGRPPSNGGPAFRFTA EVAEME ILQGHNNTMP+REVLV+LA KFSESVERKGKIAVQM
Sbjct: 1   MGRPPSNGGPAFRFTASEVAEMETILQGHNNTMPAREVLVALADKFSESVERKGKIAVQM 60

Query: 61  KQVWNWFQNRRYAIRAKTTKVPGKLAGSPIVQVESTPPRNVPQTIVVPAPTLVGPLKRAS 120
           KQVWNWFQNRRYAIRAKT+K PGKLA SP+VQ+ESTP RNVPQT+VVPAPT VG  K A 
Sbjct: 61  KQVWNWFQNRRYAIRAKTSKAPGKLAVSPVVQIESTPVRNVPQTVVVPAPTPVGTAKSAP 120

Query: 121 ENPLSEFEAKSGRDGAWYDVATFLSHRSVESGDPEVLVRFAGFGSDEDEWVNVRRNIRPR 180
           ENPLSEFEAKSGRDGAWYDVATFLSHRSVESGDPEVLVRF+GFGS+EDEWVN+RRNIRPR
Sbjct: 121 ENPLSEFEAKSGRDGAWYDVATFLSHRSVESGDPEVLVRFSGFGSEEDEWVNIRRNIRPR 180

Query: 181 SLPCESSECVAVLPGDLILCFQEGKEQALYFDAHVLDTQRRRHDVRGCRCRFLVRYDHDQ 240
           SLPCESSECVAVLPGDLILCFQEGKEQALYFDAHVLDTQRRRHDVRGCRCRFLVRYDHDQ
Sbjct: 181 SLPCESSECVAVLPGDLILCFQEGKEQALYFDAHVLDTQRRRHDVRGCRCRFLVRYDHDQ 240

Query: 241 SEEIVQLRKICRRPETDHRLLQLHAVNEAASMEPSRSGMDSVLLSGQTISFEATQKLLNK 300
           SEEIVQLRKICRRPETD+RL QLHAVNEAAS+EPS+SGMDSVLLSGQ I+FE  Q  L+K
Sbjct: 241 SEEIVQLRKICRRPETDYRLQQLHAVNEAASIEPSKSGMDSVLLSGQRINFETPQNPLSK 300

Query: 301 DATIVIPNANANINVHAQTSTQEARNTITNSAPGVFNAGNH 342
           DA +VIPNAN +IN HAQTSTQEARNT TN+AP  F++GNH
Sbjct: 301 DAALVIPNANPHINAHAQTSTQEARNTETNTAPITFSSGNH 341

[Close]

BLAST of Cp4.1LG01g01690.1 vs. NCBI nr
Match: gi|700202508|gb|KGN57641.1| (hypothetical protein Csa_3G236580 [Cucumis sativus])

HSP 1 Score: 585.5 bits (1508), Expect = 6.2e-164
Identity = 297/346 (85.84%), Postives = 316/346 (91.33%), Query Frame = 1


Query: 1   MGRPPSNGGPAFRFTAPEVAEMEAILQGHNNTMPSREVLVSLAGKFSESVERKGKIAVQM 60
           MGRPPSNGGPAFRFTA EVAEMEAILQGHNNTMP+REVLV+LA KFSESVERKGKIAVQM
Sbjct: 1   MGRPPSNGGPAFRFTASEVAEMEAILQGHNNTMPAREVLVALADKFSESVERKGKIAVQM 60

Query: 61  KQVWNWFQNRRYAIRAKTTKVPGKLAGSPIVQVESTPPRNVPQTIVVPAPTLVGPLKRAS 120
           K      QNRRYAIRAKT+K PGKLA SP+VQ+ESTP RNVPQT+VVPAP  VG  K A 
Sbjct: 61  K------QNRRYAIRAKTSKAPGKLAVSPVVQIESTPVRNVPQTVVVPAPAPVGSAKGAP 120

Query: 121 ENPLSEFEAKSGRDGAWYDVATFLSHRSVESGDPEVLVRFAGFGSDEDEWVNVRRNIRPR 180
           ENPLSEFEAKSGRDGAWYDVATFLSHRSVESGDPEVLVRF+GFGS+EDEWVN+RRNIRPR
Sbjct: 121 ENPLSEFEAKSGRDGAWYDVATFLSHRSVESGDPEVLVRFSGFGSEEDEWVNIRRNIRPR 180

Query: 181 SLPCESSECVAVLPGDLILCFQEGKEQALYFDAHVLDTQRRRHDVRGCRCRFLVRYDHDQ 240
           SLPCESSECVAVLPGDLILCFQEGKEQALYFDAHVLDTQRRRHDVRGCRCRFLVRYDHDQ
Sbjct: 181 SLPCESSECVAVLPGDLILCFQEGKEQALYFDAHVLDTQRRRHDVRGCRCRFLVRYDHDQ 240

Query: 241 SEEIVQLRKICRRPETDHRLLQLHAVNEAASMEPSRSGMDSVLLSGQTISFEATQKLLNK 300
           SEEIVQLRKICRRPETD+RL QLHAVNEAAS+EPS+SGMDSVLLSGQ I+FE +Q  L+K
Sbjct: 241 SEEIVQLRKICRRPETDYRLQQLHAVNEAASIEPSKSGMDSVLLSGQRINFETSQNPLSK 300

Query: 301 DATIVIPNANANINVHAQTSTQEARNTITNSAPGVFNAGNHAGSSA 347
           DA +VIPNAN +IN HAQTSTQEARNT TN+AP  FN+ N AGSSA
Sbjct: 301 DAALVIPNANPHINAHAQTSTQEARNTETNTAPTTFNSANLAGSSA 340

[Close]

BLAST of Cp4.1LG01g01690.1 vs. NCBI nr
Match: gi|778680371|ref|XP_011651299.1| (PREDICTED: protein SAWADEE HOMEODOMAIN HOMOLOG 2 isoform X2 [Cucumis sativus])

HSP 1 Score: 568.2 bits (1463), Expect = 1.0e-158
Identity = 283/325 (87.08%), Postives = 302/325 (92.92%), Query Frame = 1


Query: 22  MEAILQGHNNTMPSREVLVSLAGKFSESVERKGKIAVQMKQVWNWFQNRRYAIRAKTTKV 81
           MEAILQGHNNTMP+REVLV+LA KFSESVERKGKIAVQMKQVWNWFQNRRYAIRAKT+K 
Sbjct: 1   MEAILQGHNNTMPAREVLVALADKFSESVERKGKIAVQMKQVWNWFQNRRYAIRAKTSKA 60

Query: 82  PGKLAGSPIVQVESTPPRNVPQTIVVPAPTLVGPLKRASENPLSEFEAKSGRDGAWYDVA 141
           PGKLA SP+VQ+ESTP RNVPQT+VVPAP  VG  K A ENPLSEFEAKSGRDGAWYDVA
Sbjct: 61  PGKLAVSPVVQIESTPVRNVPQTVVVPAPAPVGSAKGAPENPLSEFEAKSGRDGAWYDVA 120

Query: 142 TFLSHRSVESGDPEVLVRFAGFGSDEDEWVNVRRNIRPRSLPCESSECVAVLPGDLILCF 201
           TFLSHRSVESGDPEVLVRF+GFGS+EDEWVN+RRNIRPRSLPCESSECVAVLPGDLILCF
Sbjct: 121 TFLSHRSVESGDPEVLVRFSGFGSEEDEWVNIRRNIRPRSLPCESSECVAVLPGDLILCF 180

Query: 202 QEGKEQALYFDAHVLDTQRRRHDVRGCRCRFLVRYDHDQSEEIVQLRKICRRPETDHRLL 261
           QEGKEQALYFDAHVLDTQRRRHDVRGCRCRFLVRYDHDQSEEIVQLRKICRRPETD+RL 
Sbjct: 181 QEGKEQALYFDAHVLDTQRRRHDVRGCRCRFLVRYDHDQSEEIVQLRKICRRPETDYRLQ 240

Query: 262 QLHAVNEAASMEPSRSGMDSVLLSGQTISFEATQKLLNKDATIVIPNANANINVHAQTST 321
           QLHAVNEAAS+EPS+SGMDSVLLSGQ I+FE +Q  L+KDA +VIPNAN +IN HAQTST
Sbjct: 241 QLHAVNEAASIEPSKSGMDSVLLSGQRINFETSQNPLSKDAALVIPNANPHINAHAQTST 300

Query: 322 QEARNTITNSAPGVFNAGNHAGSSA 347
           QEARNT TN+AP  FN+ N AGSSA
Sbjct: 301 QEARNTETNTAPTTFNSANLAGSSA 325

[Close]

BLAST of Cp4.1LG01g01690.1 vs. NCBI nr
Match: gi|659111993|ref|XP_008456011.1| (PREDICTED: protein SAWADEE HOMEODOMAIN HOMOLOG 2 isoform X2 [Cucumis melo])

HSP 1 Score: 565.1 bits (1455), Expect = 8.7e-158
Identity = 279/320 (87.19%), Postives = 298/320 (93.12%), Query Frame = 1


Query: 22  MEAILQGHNNTMPSREVLVSLAGKFSESVERKGKIAVQMKQVWNWFQNRRYAIRAKTTKV 81
           ME ILQGHNNTMP+REVLV+LA KFSESVERKGKIAVQMKQVWNWFQNRRYAIRAKT+K 
Sbjct: 1   METILQGHNNTMPAREVLVALADKFSESVERKGKIAVQMKQVWNWFQNRRYAIRAKTSKA 60

Query: 82  PGKLAGSPIVQVESTPPRNVPQTIVVPAPTLVGPLKRASENPLSEFEAKSGRDGAWYDVA 141
           PGKLA SP+VQ+ESTP RNVPQT+VVPAPT VG  K A ENPLSEFEAKSGRDGAWYDVA
Sbjct: 61  PGKLAVSPVVQIESTPVRNVPQTVVVPAPTPVGTAKSAPENPLSEFEAKSGRDGAWYDVA 120

Query: 142 TFLSHRSVESGDPEVLVRFAGFGSDEDEWVNVRRNIRPRSLPCESSECVAVLPGDLILCF 201
           TFLSHRSVESGDPEVLVRF+GFGS+EDEWVN+RRNIRPRSLPCESSECVAVLPGDLILCF
Sbjct: 121 TFLSHRSVESGDPEVLVRFSGFGSEEDEWVNIRRNIRPRSLPCESSECVAVLPGDLILCF 180

Query: 202 QEGKEQALYFDAHVLDTQRRRHDVRGCRCRFLVRYDHDQSEEIVQLRKICRRPETDHRLL 261
           QEGKEQALYFDAHVLDTQRRRHDVRGCRCRFLVRYDHDQSEEIVQLRKICRRPETD+RL 
Sbjct: 181 QEGKEQALYFDAHVLDTQRRRHDVRGCRCRFLVRYDHDQSEEIVQLRKICRRPETDYRLQ 240

Query: 262 QLHAVNEAASMEPSRSGMDSVLLSGQTISFEATQKLLNKDATIVIPNANANINVHAQTST 321
           QLHAVNEAAS+EPS+SGMDSVLLSGQ I+FE  Q  L+KDA +VIPNAN +IN HAQTST
Sbjct: 241 QLHAVNEAASIEPSKSGMDSVLLSGQRINFETPQNPLSKDAALVIPNANPHINAHAQTST 300

Query: 322 QEARNTITNSAPGVFNAGNH 342
           QEARNT TN+AP  F++GNH
Sbjct: 301 QEARNTETNTAPITFSSGNH 320

The following BLAST results are available for this feature:

BLAST of Cp4.1LG01g01690.1 vs. Swiss-Prot


Match Name	E-value	Identity	Description
SHH2_ARATH	9.4e-104	58.82	Protein SAWADEE HOMEODOMAIN HOMOLOG 2 OS=Arabidopsis thaliana GN=SHH2 PE=2 SV=1	[more]
SHH1_ARATH	3.4e-45	42.57	Protein SAWADEE HOMEODOMAIN HOMOLOG 1 OS=Arabidopsis thaliana GN=SHH1 PE=1 SV=1	[more]

BLAST of Cp4.1LG01g01690.1 vs. TrEMBL


Match Name	E-value	Identity	Description
A0A0A0LC67_CUCSA	4.3e-164	85.84	Uncharacterized protein OS=Cucumis sativus GN=Csa_3G236580 PE=4 SV=1	[more]
M5WG16_PRUPE	1.8e-125	68.52	Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa007389mg PE=4 SV=1	[more]
W9RI10_9ROSA	1.2e-124	68.29	Uncharacterized protein OS=Morus notabilis GN=L484_012170 PE=4 SV=1	[more]
A0A0B2PMB5_GLYSO	2.7e-121	67.88	Uncharacterized protein OS=Glycine soja GN=glysoja_048524 PE=4 SV=1	[more]
A0A0R0H5Q7_SOYBN	2.7e-121	67.88	Uncharacterized protein OS=Glycine max GN=GLYMA_12G158000 PE=4 SV=1	[more]

BLAST of Cp4.1LG01g01690.1 vs. TAIR10


Match Name	E-value	Identity	Description
AT3G18380.2	1.3e-103	58.65	sequence-specific DNA binding transcription factors;sequence-specifi...	[more]
AT1G15215.2	1.9e-46	42.57	BEST Arabidopsis thaliana protein match is: sequence-specific DNA bi...	[more]

BLAST of Cp4.1LG01g01690.1 vs. NCBI nr


Match Name	E-value	Identity	Description
gi\|778680368\|ref\|XP_011651298.1\|	6.9e-171	87.57	PREDICTED: protein SAWADEE HOMEODOMAIN HOMOLOG 2 isoform X1 [Cucumis sativus]	[more]
gi\|659111991\|ref\|XP_008456010.1\|	5.8e-170	87.68	PREDICTED: protein SAWADEE HOMEODOMAIN HOMOLOG 2 isoform X1 [Cucumis melo]	[more]
gi\|700202508\|gb\|KGN57641.1\|	6.2e-164	85.84	hypothetical protein Csa_3G236580 [Cucumis sativus]	[more]
gi\|778680371\|ref\|XP_011651299.1\|	1.0e-158	87.08	PREDICTED: protein SAWADEE HOMEODOMAIN HOMOLOG 2 isoform X2 [Cucumis sativus]	[more]
gi\|659111993\|ref\|XP_008456011.1\|	8.7e-158	87.19	PREDICTED: protein SAWADEE HOMEODOMAIN HOMOLOG 2 isoform X2 [Cucumis melo]	[more]

Annotated Terms

The following terms have been associated with this mRNA:

Vocabulary: **Molecular Function**
Term	Definition
GO:0003677	DNA binding
GO:0003682	chromatin binding

Vocabulary: **INTERPRO**
Term	Definition
IPR009057	Homeobox-like_sf
IPR001356	Homeobox_dom

GO Annotation

GO Assignments

This mRNA is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0008150	biological_process
cellular_component	GO:0000785	chromatin
cellular_component	GO:0005634	nucleus
molecular_function	GO:0003682	chromatin binding
molecular_function	GO:0003677	DNA binding

Relationships

This mRNA is a part of the following gene feature(s):


Feature Name	Unique Name	Type
Cp4.1LG01g01690	Cp4.1LG01g01690	gene

The following polypeptide feature(s) derives from this mRNA:


Feature Name	Unique Name	Type
Cp4.1LG01g01690.1	Cp4.1LG01g01690.1-protein	polypeptide

The following five_prime_UTR feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
Cp4.1LG01g01690.1:five_prime_utr:001	Cp4.1LG01g01690.1:five_prime_utr:001	five_prime_UTR
Cp4.1LG01g01690.1:five_prime_utr:002	Cp4.1LG01g01690.1:five_prime_utr:002	five_prime_UTR

The following CDS feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
Cp4.1LG01g01690.1:cds:001	Cp4.1LG01g01690.1:cds:001	CDS
Cp4.1LG01g01690.1:cds:002	Cp4.1LG01g01690.1:cds:002	CDS
Cp4.1LG01g01690.1:cds:003	Cp4.1LG01g01690.1:cds:003	CDS
Cp4.1LG01g01690.1:cds:004	Cp4.1LG01g01690.1:cds:004	CDS
Cp4.1LG01g01690.1:cds:005	Cp4.1LG01g01690.1:cds:005	CDS
Cp4.1LG01g01690.1:cds:006	Cp4.1LG01g01690.1:cds:006	CDS
Cp4.1LG01g01690.1:cds:007	Cp4.1LG01g01690.1:cds:007	CDS
Cp4.1LG01g01690.1:cds:008	Cp4.1LG01g01690.1:cds:008	CDS
Cp4.1LG01g01690.1:cds:009	Cp4.1LG01g01690.1:cds:009	CDS

The following three_prime_UTR feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
Cp4.1LG01g01690.1:three_prime_utr:001	Cp4.1LG01g01690.1:three_prime_utr:001	three_prime_UTR

InterPro

Analysis Name: InterPro Annotations of Cucurbita pepo
Date Performed: 2017-12-02


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR001356	Homeobox domain	PFAM	PF00046	Homeobox	coord: 13..74 score: 1.
IPR001356	Homeobox domain	SMART	SM00389	HOX_1	coord: 7..81 score: 0.
IPR001356	Homeobox domain	PROFILE	PS50071	HOMEOBOX_2	coord: 13..77 score: 9
IPR009057	Homeodomain-like	GENE3D	G3DSA:1.10.10.60		coord: 13..78 score: 3.
IPR009057	Homeodomain-like	unknown	SSF46689	Homeodomain-like	coord: 4..75 score: 3.68
None	No IPR available	PANTHER	PTHR33827	FAMILY NOT NAMED	coord: 2..332 score: 4.4E
None	No IPR available	PANTHER	PTHR33827:SF3	PROTEIN SAWADEE HOMEODOMAIN HOMOLOG 2	coord: 2..332 score: 4.4E