Cp4.1LG00g09070.1 (mRNA) Cucurbita pepo (Zucchini)
The following sequences are available for this feature:
Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.ATGGAAAACTCAGCCATCTCCAGAATCTGCACCCAGAAGCAGGTGGATCAAGATCACAGTAGTTGGACTTCCTCCATGGACGACCTCCTCTTATTCGACCACTCTAAAACAATTTCATATCACTTTCAAAACGCCGCCGTCTTTTCTTCCTCCGATGACGACGATCTCCAAGACACTGCAACTTCTCCGCCTCATCCTTCCATAATTTCCGACGTACATTACATTCTCAGCTATATAAATTATCATCCAAAACTTTTGCTTACACTTTTTTTTAAACTGGGTTTTGTGTTTTGAATCAGATGGATGGGCTTAGCTCCAAGCAAAAGAAGCAGCAGCAGCTCAGTGCCATGATCAATCAAACAAAACACAAGGTTTGTAATTTTTTAGTGTTTTTACATTAAAAATCCATTCTTTGATGCAATTTTAACTGTGATTTTGGGGTTTTGATTTTGTAGGGGAAAGAAATTGAGGAATTTGGGGAAGTTGAAGATAGAATTGAAGTGGGTTTTGTGGGGAGGGATAATAATTGTAGCACAGGGCTCAAGAACATTGGCCTTTGCTTGGTTCCTGTATCCATGGCTATCAATTATTTTGGTTAG ATGGAAAACTCAGCCATCTCCAGAATCTGCACCCAGAAGCAGGTGGATCAAGATCACAGTAGTTGGACTTCCTCCATGGACGACCTCCTCTTATTCGACCACTCTAAAACAATTTCATATCACTTTCAAAACGCCGCCGTCTTTTCTTCCTCCGATGACGACGATCTCCAAGACACTGCAACTTCTCCGCCTCATCCTTCCATAATTTCCGACATGGATGGGCTTAGCTCCAAGCAAAAGAAGCAGCAGCAGCTCAGTGCCATGATCAATCAAACAAAACACAAGGGGAAAGAAATTGAGGAATTTGGGGAAGTTGAAGATAGAATTGAAGTGGGTTTTGTGGGGAGGGATAATAATTGTAGCACAGGGCTCAAGAACATTGGCCTTTGCTTGGTTCCTGTATCCATGGCTATCAATTATTTTGGTTAG ATGGAAAACTCAGCCATCTCCAGAATCTGCACCCAGAAGCAGGTGGATCAAGATCACAGTAGTTGGACTTCCTCCATGGACGACCTCCTCTTATTCGACCACTCTAAAACAATTTCATATCACTTTCAAAACGCCGCCGTCTTTTCTTCCTCCGATGACGACGATCTCCAAGACACTGCAACTTCTCCGCCTCATCCTTCCATAATTTCCGACATGGATGGGCTTAGCTCCAAGCAAAAGAAGCAGCAGCAGCTCAGTGCCATGATCAATCAAACAAAACACAAGGGGAAAGAAATTGAGGAATTTGGGGAAGTTGAAGATAGAATTGAAGTGGGTTTTGTGGGGAGGGATAATAATTGTAGCACAGGGCTCAAGAACATTGGCCTTTGCTTGGTTCCTGTATCCATGGCTATCAATTATTTTGGTTAG MENSAISRICTQKQVDQDHSSWTSSMDDLLLFDHSKTISYHFQNAAVFSSSDDDDLQDTATSPPHPSIISDMDGLSSKQKKQQQLSAMINQTKHKGKEIEEFGEVEDRIEVGFVGRDNNCSTGLKNIGLCLVPVSMAINYFG
BLAST of Cp4.1LG00g09070.1 vs. TrEMBL
Match: A0A0A0L2F7_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_3G078270 PE=4 SV=1) HSP 1 Score: 153.7 bits (387), Expect = 1.7e-34 Identity = 100/177 (56.50%), Postives = 117/177 (66.10%), Query Frame = 1
BLAST of Cp4.1LG00g09070.1 vs. TrEMBL
Match: B9SA47_RICCO (Putative uncharacterized protein OS=Ricinus communis GN=RCOM_0185030 PE=4 SV=1) HSP 1 Score: 60.5 bits (145), Expect = 2.0e-06 Identity = 42/115 (36.52%), Postives = 67/115 (58.26%), Query Frame = 1
BLAST of Cp4.1LG00g09070.1 vs. NCBI nr
Match: gi|700201012|gb|KGN56145.1| (hypothetical protein Csa_3G078270 [Cucumis sativus]) HSP 1 Score: 153.7 bits (387), Expect = 2.4e-34 Identity = 100/177 (56.50%), Postives = 117/177 (66.10%), Query Frame = 1
BLAST of Cp4.1LG00g09070.1 vs. NCBI nr
Match: gi|659126934|ref|XP_008463437.1| (PREDICTED: uncharacterized protein LOC103501601 [Cucumis melo]) HSP 1 Score: 141.0 bits (354), Expect = 1.6e-30 Identity = 95/177 (53.67%), Postives = 111/177 (62.71%), Query Frame = 1
BLAST of Cp4.1LG00g09070.1 vs. NCBI nr
Match: gi|778688383|ref|XP_011652737.1| (PREDICTED: uncharacterized protein LOC105435073 [Cucumis sativus]) HSP 1 Score: 140.2 bits (352), Expect = 2.8e-30 Identity = 89/149 (59.73%), Postives = 102/149 (68.46%), Query Frame = 1
BLAST of Cp4.1LG00g09070.1 vs. NCBI nr
Match: gi|255563729|ref|XP_002522866.1| (PREDICTED: uncharacterized protein LOC8280744 [Ricinus communis]) HSP 1 Score: 60.5 bits (145), Expect = 2.8e-06 Identity = 42/115 (36.52%), Postives = 67/115 (58.26%), Query Frame = 1
The following BLAST results are available for this feature:
The following terms have been associated with this mRNA:
GO Assignments
This mRNA is annotated with the following GO terms.
This mRNA is a part of the following gene feature(s):
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Analysis Name: InterPro Annotations of Cucurbita pepo
Date Performed: 2017-12-02
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