Cp4.1LG17g08560 (gene) Cucurbita pepo (Zucchini)
The following sequences are available for this feature:
Legend: CDS Hold the cursor over a type above to highlight its positions in the sequence below.ATGTCGTTTTGTTCTGCAATTTATCTGCTTCGCGTCTCGGTGAACGCGACCACATCAAATACCCACAACTCCATGTTCCTCTCTTCCTCTCTCTCTTCCTCTGTATGTGAAAATTCGAAGAGGATTCTTCACAGCGAAGATTCGGCGAAGTTCTTCCCCGAATTCTCTCCAATGGCGCGCGATAATTCCGGTAAGCTAGATAGGATTCTGGAAGGCTTTTCTCCGGCGTCGGCTCCTCGAATTCAGTGGAAATCTCGCCGGAGATCAGGTAGTACTACTTAATTCTTCTCTCTGGTGGAATTTGGCTTCAATTTTTGAAAATTTTGTTAAGTCGATGAAGATCGGAAACGCGGAATTTCTCTATGGGAAAGTAATCGAATCCGTCTAGGTTTTCTAATTATCGATATAATCTGAGACGTTTCCTCACAAATTTTGAAGAACACTTCTGCCCTAACCAGGCTCCTCTGTTCTGATTCCTCATCTTTGGCTCTTGAACTGCTTTCGTGATTTCTTTGATGATGAATTCATTTTTCAGTTCGTCAATAGCCTTGAAAAATTGGAGATGAGAAAAGATGCACGCTAACACGAACGGTTAACTTCGCTCTTAAGTTACGTGTGCTTTTCTGTTTCTGTTCATGCCTGCCTCGTGATTTCTGTTACCAAAAAAAAAAAGAAAAAAAAAAAAAAAATCAAATAATTTCTAATTGCAAAACTAATATAATTTCAATAAAATAAAACATTTAATGTAAATTTGAAAACTTTTTCTATGGTTTTTATTATTATTACTATTTATTTATTTATTTGGAGGAATTAATGATAGGGAGTAGATTAATAGGAGTAGTTTGATAGTTTGACAGTTTGATAAAAAGATNTTTTTTTTTTTTTTTTTTTGTGTGGTGATAAAATCGGCTGAACCAACCCATTTTTCACCCCACCCACCCGTGGGAGTCGACGTTTTCATTGACTTTATTTATATATTCATTTATTCATTTTCCTCATTTATTTGATACGAAAGGCCATTATTGTCATCATATGGGGAATTATTAATTAAAATTGAATTTAGAAACTATTATTTTTTAAAACGACGTCGGAAAAGGAATCCTCCACCCCATAATAGAGCATGCCTTACAAGTCAGTCATGAGCTTTTTAGTTTGTTTTTAAATAATTTTTTATGCTTTTCAAAAAGCTTTTATAATTTGATTTTGAGTTTTCCAATGAAAACTCAATAAGAATAAGAATAGTGTTTATTTCTTATAAATTCATAACATTCCTCTTAATTAGTGGACGTGATAATTAAGCTTAGGTGAGTGAGGATTGAATTACAGGATTGATCATTGGGATGCACCTTGCCATATATAGGGAATGTTTAAACGTTCTAAATGGACATTGGATCCCTATTCCTACACTTGGATACTTTTCTCTAATATCAAGTTTGGTATTTAAATGATGGGACTCAACACCAACTATTTTAAGTTTTTTTTTTTCATTAGGCCCACATTCAGTTCTCAATTTCTTGTTGTCTTCTTCTCCTTCAAACTCAAGATTTGATGATTTGATGATTTGATGATTTGATGATTTCTTGTTACCATCCCATCTTCCCATTTCATTTCATTTATCGTCATCATAATGTAATTTTTGTATGATTTATTATATTTTTTAAGACTCGCCTTTACTTTTCTCCTTTTTTTTCTTTCTTGTTCATAGTTCACTGTTTCACTCATTATTGTATCTTTGCTTTTAATATAATTTTCCCTTTTCTGATGGAAAGCATGGTTTGTTCATACTTTTCACAATTTGGTTATGTCAACCTCAATTGGATGTCTTTTTTTTCCACTTTTCTTTCTTCTTTGGACCTAATCTAACTTAGAGTTATCTTGAGATCGAGAGTTCGAGCTTATTTTTCTTTTTTAATAATTAAAAAGTCCTATAAAACCTAAAAAATCTGTTGGTGTCATTTTGATCTCTAAACTTCATATTTTGTTGTTAAGGGGTGATGGTGTAGCTCGCTAGTGCTAGGTCTCATAGCTTAGAGTTATCATGAGGTTGAGAGTTTGAGCCTCTCTCACCCCATTAGTATTTTTTTTAACGATTAAAAAAAAGTTTATGTCATTTTAATCCCTGGACTTTAAATTTTTTTCACCGAGGGGTGGTGGCACAGTTGGTTAGCGCGTAGGTCTCATAGCCTCTCTCACCCCATAGTTTATTTCTTTTTTAAACAATTAAAAACAAACGTCCTGATAAACCTAGCTAAACATTTGTTTGTGTAGTTTTGATCTCTGAACTTTAAATTTTTTCATCAAGGGGTGGTGGCGCAGTTGGCTAGCGCGTAGGTCTCATAGCTTAGAGTTATCCTGAGGTCGAGAGTTCGAGCCTCTCTCACCCCATAGTATTTTTCTTTTTTAACCACTAAAAAAAACGTCCTATAAAACCTAGCTAAACATTTGTTTGTGTGATCACTTAACTTCAAATATTTTCTTCTAAGGGGTGGGGTGGTGGCGTAGTTGGCTAGCGTGTACGTCTCATAGCTTAGAGTTATCTTGAGGTTGAGATTTGGAGCCTCTCTCACCCTATAGTATTTTCTTAAACAATTAAAAAAAAAACGTCCTATAAAATCTAGCTAAACATTTGTATCGTTTTGATCTCTGAAGTTCAAATTTTTTCATCAAGCATTTCTGTATTTGTTGTCCCTCTAATTTTGTTGGAACTAGAATGCTCTCTTCTTTCCAACAGCTACCGAGAGGATCTTAGACAACATAACTCAAGATCATGATGCTGCTGACAAAACATCCGACAAACACGAACAACCTCAGCCCCCCAAAACACTCTTCCCCGACCTCTCCGACCGTCGAAAGGCCCTCTTTGAGCCTTTAGAATCCGTCAAAAACATCAATGGCCGCAGACCATCAGCTGAATCCTTACTCCCTCCACCCGACTTCGACGCCACCGCATATCCCCGAGGCTGGCTGATCGGAAAGAAGCGAAAACTCGTCAATGTCGACGTTGTCGAAAGCATGCGGAGGATTGCCATTCAAGAAATGAACAGAAAGGCATTCCTCTAATTTTACTATTATTATTACATCACATCAACGTGGTCTCTCTAGTTCATTGTTGTTGTCGTTGTTGTCGTTGTTGTTATTGTAGGACCGAGAAATCGGCGGTCTGAATGAGCAGCTCGACGAGGACGCGCGCTGCTTAGAACATCTTCAAATTCAACTTCTACAAGAGAAGAGCAAAAGATCAGAGGTCGAGAGGGAAAATGCAATGCTGCATGATCAAGTAAGTATGCTAATGAGCATGCTGGAAAATGAAGGAGCTGATGGCTCAGATGAACCTTAA ATGTCCGAAGATTCGGCGAAGTTCTTCCCCGAATTCTCTCCAATGGCGCGCGATAATTCCGGTAAGCTAGATAGGATTCTGGAAGGCTTTTCTCCGGCGTCGGCTCCTCGAATTCAGTGGAAATCTCGCCGGAGATCAGCTACCGAGAGGATCTTAGACAACATAACTCAAGATCATGATGCTGCTGACAAAACATCCGACAAACACGAACAACCTCAGCCCCCCAAAACACTCTTCCCCGACCTCTCCGACCGTCGAAAGGCCCTCTTTGAGCCTTTAGAATCCGTCAAAAACATCAATGGCCGCAGACCATCAGCTGAATCCTTACTCCCTCCACCCGACTTCGACGCCACCGCATATCCCCGAGGCTGGCTGATCGGAAAGAAGCGAAAACTCGTCAATGTCGACGACCGAGAAATCGGCGGTCTGAATGAGCAGCTCGACGAGGACGCGCGCTGCTTAGAACATCTTCAAATTCAACTTCTACAAGAGAAGAGCAAAAGATCAGAGGTCGAGAGGGAAAATGCAATGCTGCATGATCAAGTAAGTATGCTAATGAGCATGCTGGAAAATGAAGGAGCTGATGGCTCAGATGAACCTTAA ATGTCCGAAGATTCGGCGAAGTTCTTCCCCGAATTCTCTCCAATGGCGCGCGATAATTCCGGTAAGCTAGATAGGATTCTGGAAGGCTTTTCTCCGGCGTCGGCTCCTCGAATTCAGTGGAAATCTCGCCGGAGATCAGCTACCGAGAGGATCTTAGACAACATAACTCAAGATCATGATGCTGCTGACAAAACATCCGACAAACACGAACAACCTCAGCCCCCCAAAACACTCTTCCCCGACCTCTCCGACCGTCGAAAGGCCCTCTTTGAGCCTTTAGAATCCGTCAAAAACATCAATGGCCGCAGACCATCAGCTGAATCCTTACTCCCTCCACCCGACTTCGACGCCACCGCATATCCCCGAGGCTGGCTGATCGGAAAGAAGCGAAAACTCGTCAATGTCGACGACCGAGAAATCGGCGGTCTGAATGAGCAGCTCGACGAGGACGCGCGCTGCTTAGAACATCTTCAAATTCAACTTCTACAAGAGAAGAGCAAAAGATCAGAGGTCGAGAGGGAAAATGCAATGCTGCATGATCAAGTAAGTATGCTAATGAGCATGCTGGAAAATGAAGGAGCTGATGGCTCAGATGAACCTTAA MSEDSAKFFPEFSPMARDNSGKLDRILEGFSPASAPRIQWKSRRRSATERILDNITQDHDAADKTSDKHEQPQPPKTLFPDLSDRRKALFEPLESVKNINGRRPSAESLLPPPDFDATAYPRGWLIGKKRKLVNVDDREIGGLNEQLDEDARCLEHLQIQLLQEKSKRSEVERENAMLHDQVSMLMSMLENEGADGSDEP
BLAST of Cp4.1LG17g08560 vs. TrEMBL
Match: A0A0A0K6R3_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_7G430820 PE=4 SV=1) HSP 1 Score: 273.9 bits (699), Expect = 1.6e-70 Identity = 150/213 (70.42%), Postives = 165/213 (77.46%), Query Frame = 1
BLAST of Cp4.1LG17g08560 vs. TrEMBL
Match: A0A0D2TTD1_GOSRA (Uncharacterized protein OS=Gossypium raimondii GN=B456_007G085500 PE=4 SV=1) HSP 1 Score: 222.6 bits (566), Expect = 4.2e-55 Identity = 125/195 (64.10%), Postives = 144/195 (73.85%), Query Frame = 1
BLAST of Cp4.1LG17g08560 vs. TrEMBL
Match: A0A067LBS6_JATCU (Uncharacterized protein OS=Jatropha curcas GN=JCGZ_26963 PE=4 SV=1) HSP 1 Score: 222.2 bits (565), Expect = 5.5e-55 Identity = 123/200 (61.50%), Postives = 147/200 (73.50%), Query Frame = 1
BLAST of Cp4.1LG17g08560 vs. TrEMBL
Match: M5WV98_PRUPE (Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa011418mg PE=4 SV=1) HSP 1 Score: 221.1 bits (562), Expect = 1.2e-54 Identity = 124/201 (61.69%), Postives = 144/201 (71.64%), Query Frame = 1
BLAST of Cp4.1LG17g08560 vs. TrEMBL
Match: B9GLP2_POPTR (Uncharacterized protein OS=Populus trichocarpa GN=POPTR_0001s03340g PE=4 SV=1) HSP 1 Score: 220.3 bits (560), Expect = 2.1e-54 Identity = 125/203 (61.58%), Postives = 148/203 (72.91%), Query Frame = 1
BLAST of Cp4.1LG17g08560 vs. TAIR10
Match: AT1G80940.1 (AT1G80940.1 unknown protein) HSP 1 Score: 188.0 bits (476), Expect = 5.8e-48 Identity = 102/198 (51.52%), Postives = 138/198 (69.70%), Query Frame = 1
BLAST of Cp4.1LG17g08560 vs. NCBI nr
Match: gi|659122564|ref|XP_008461210.1| (PREDICTED: uncharacterized protein LOC103499861 isoform X2 [Cucumis melo]) HSP 1 Score: 283.9 bits (725), Expect = 2.2e-73 Identity = 155/221 (70.14%), Postives = 170/221 (76.92%), Query Frame = 1
BLAST of Cp4.1LG17g08560 vs. NCBI nr
Match: gi|449436217|ref|XP_004135890.1| (PREDICTED: uncharacterized protein LOC101217255 isoform X2 [Cucumis sativus]) HSP 1 Score: 279.3 bits (713), Expect = 5.4e-72 Identity = 151/210 (71.90%), Postives = 165/210 (78.57%), Query Frame = 1
BLAST of Cp4.1LG17g08560 vs. NCBI nr
Match: gi|659122562|ref|XP_008461209.1| (PREDICTED: uncharacterized protein LOC103499861 isoform X1 [Cucumis melo]) HSP 1 Score: 277.7 bits (709), Expect = 1.6e-71 Identity = 154/224 (68.75%), Postives = 169/224 (75.45%), Query Frame = 1
BLAST of Cp4.1LG17g08560 vs. NCBI nr
Match: gi|778728853|ref|XP_011659486.1| (PREDICTED: uncharacterized protein LOC101217255 isoform X1 [Cucumis sativus]) HSP 1 Score: 273.9 bits (699), Expect = 2.3e-70 Identity = 150/213 (70.42%), Postives = 165/213 (77.46%), Query Frame = 1
BLAST of Cp4.1LG17g08560 vs. NCBI nr
Match: gi|645245357|ref|XP_008228841.1| (PREDICTED: uncharacterized protein LOC103328228 isoform X3 [Prunus mume]) HSP 1 Score: 229.6 bits (584), Expect = 4.9e-57 Identity = 126/200 (63.00%), Postives = 147/200 (73.50%), Query Frame = 1
The following BLAST results are available for this feature:
The following terms have been associated with this gene:
GO Assignments
This gene is annotated with the following GO terms.
The following mRNA feature(s) are a part of this gene:
Analysis Name: InterPro Annotations of Cucurbita pepo
Date Performed: 2017-12-02
The following gene(s) are orthologous to this gene:
The following gene(s) are paralogous to this gene: None The following block(s) are covering this gene:
|