CsaV3_7G031710 (gene) Cucumber (Chinese Long) v3

Overview
NameCsaV3_7G031710
Typegene
OrganismCucumis sativus (Cucumber (Chinese Long) v3)
DescriptionSnf1-related kinase interactor 1, putative
Locationchr7 : 20081426 .. 20086300 (+)
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATAACGCAAAATCTGAACCGTTGGATTACAATCACGTGGTTTAGCTGTCGTTTTGTTCAGCAATTTATCTGCTTCTCTTCTCGATGAATGCACCCACAACAAACACCGAACCAAAAATCCTTTAAACCGACTCGAAATCCACAACTCCATTTCCCTCTCTCTCTCTCTCATTTTCTATATGCGAAAATTCGAATAGGATTCTTCGGAACGACTGTCTGGTGAAGCTCTTCCTCGAATTCCTTCCTCTTCAATGGAACACAATCATTCCGGCAAGATTGATAGGATTCTTGAAGGTTTTTCTCCAGCGTCGGCTCCTCGAATTCAGTGGAATTCTCGCCGGAGGTCAGGTAGTCAAAGTACTAGTCAATCAACTCTCTCTCTCTCTCTCTCTCTCTCTCTCTATGATTAATTTCTCCAGTGGAAATTGCTTCCAATTTTTTGAAACTTTGTGAAGTCGATGAAGATCAGAAACTCGAAATTTCTCTTTTCGGAAGTGAGCGAATTCGTTTAGGTTTTGAAATTATCGCATAATCTGAGACATTTCCTCACAAATTTTAGAAGAATTTCTCGCCGGAGGTCAGGTAGTCGTAGTACTAGTTAATCACTCTCTCTCTCTAGCTAATTAACTTCTCTGGTGAAACTTGCTTTCTTCAATTTTTGAAAACTTTGCGAAGTCGATGAAGATCAGAACTCGGAATTTCTCTTTTCGGAAGTTAGCGAATCTGTTTAGGTTTTGAAATTATCGCATAATCTGAGACATTTCTTCACAAATTATAGAAGAATTTCATGCCCTAACTCAAGAAATTAACCAAGCTTGTCTGTTATGATTTCTCATCCTTCCTGCTTTTGGAAATACGAAAAATGATTGAACTTCGCTCTTATGTTATGTGTTGGTTTCTTCAAGATTATGTTCATCGCTTACTCCTCCTGTGAATTTCTGCTAATCTGTTACGTTTCTCCAATAAAAATAAAAATAAAAATAAACTTTATTTGTATATATTTTTTAAAATTGCGTAGATTTTAGGCCCCGAAGAATCGATGATAATGATTAATTAATTTAATTATATTTTGGTGTATGCATTAATGTGTTTGCCTTTTAGGCTCATTTATAAATTTATGGCTCAAAATTGGGTTAACAAAGCCAAAGCGCAAGGCCACCCGCTACCCATTACCCATCACCCATCACCCAACCCACCGGTTGAAGTTGACTTATCAATAGACTTTCTTTTTCTTTTGCCCACTCGTTTCGGTATATTACACGAAAGCTCTTTATTGTCATATTACGTGGATTGTATTTTTATTTAGAAGGGAAATAATAAGCTCTTTATTAAAACGACGTCGGAGCTCGTTTTTCTTATTTATTTAATTTGTTTCTTAGGGAAAATATGTTTTTTTTGTCAATATTATTGATTTTGTTTTATTCATAATTCAGCATGCCTTACACGTTACGAGCTTTATTATTATTATTATTATTATTATTATTATTATGTATAATAACGTTACGTGCTTTACTATGTTTTCACTTTTTTTTTTGAAGAATTTTCGTGTTAATTAGAGATTGTTCTTTGTATTGAAAATCATCTTTTAGTTTCCAAAATAATAATAATAATAATTATTATTATTATGATAATTAAAAAATCATCTTTTAGTGTTTATAACTTCAAATGTATTTAAAATAAAGACAAATTGCAAAAAAAAAAAACACAACTGGAAGTATGATTGTAATTATAAATAGATCCACAAAATTTTAATTGTAGAAAGTGCCCTCAATTAATTCATAGAATTGATACGGTGTCTAATTGGGTAAGTTCTTAGGTTCGAGAGATCAAATTGAAATTTTTAACTGTAATTGTCATGATACTTTAGGGATGGTTTTGAATTTCGGGAAAATTACCCTTTGTTTTCAGGTATGAACCATGTCTCTAACTATTTGATGTCACTCATGTTTTTTCTTTTGAATATCATTTATATTTGGAAGATTTGAGTCTTAACTTTTTTGTCAAATGTATATATTTTATATGAAGTCAAAAGTATATACTTTGTGATTAGTTGAGTTGTGTCGATGTCGTGTATTTAGATTTTAATATCATTTTGATCCATATACTTTGAGTTGGTTCTCTTTTACAAATTTTGTCTATTAGCATTGTATCTTTTTAAGTCTTGGATACAAGTTTAACCTCATTTGTTTTTTATTCCTGATTAATTTCTGAATAAAAGATAGAAGACATTTTGAAATTGGGTTTGTGAGCCAATGGTTATTTTCAAATATTATATTTTCCAACCAAGTGGATTAAGAAACTTTTGTAGTAATGAGAAACTGATACCAAACCAACATGTCACTTCACAAAATTATACATCAAAACAATTTTCCTTTTGTATCTTTTCAACTAATAGAGATTTTCCCCCTTTTAAGACACAATATCTAGTTGTCTAATTTAATCTGGTTGCCTTTTTTTCCCTCTTTCTTCACTTTTAAAATTTTAATTTTCACTCTACAAATTAAAAGTGATAATTCAACCTTTATCAGGAATTAATTAAAGGGTTGGCCATTGAGATGCTCCATAATCTATTCCATAAATAGTGAATCTATAAAGGTTAAAAGATTTTAAGTTACAATCTCTTTGGACATAGGATCCCTATTCCTTACTTAGATGCTTTTCTCATATGTCAAGTTTGGTATTCAAATGATGGGACTTAACGCCCACTATATCATATATTGGTTTCAGTATTCTTATAAGGCCCACGTTCAGTTATTAATCATTGAAATTTTCTTGTTGTCTTCTTCTTGAAAATCAAGATTTGGTGTTTTGGGGATCAATTATATAACGTTTCCACCCCATCTTTGATTTTCATTTCATTTCATTTCTCATCATAATGTAAATTTGATGATTTTTTATATTTGAAGAATTGCATGCCTGTGACTTTATCTTGGAGTTGGCTTACTGTTCTCCTTTTTACCTCTTGTTGTTGCTTGGAGACACACTCTCTCTCTCTCATAGTCACTCACTCTAAAGCTAATATCATTATTGAATCTTTGCTTTCAATATAATTTTCCCTTTTCTGATTGATGGATAGTTTGTTCTCATATTTTTCACAATTGGGTTATATTGAATTCTGTTAGGGGCTGTTTGGGGCTGGTACTATTCGGAATCAGGAACTCTGAGGTTGTTTTAGCATTAGCTTTTTTTCTATTCAACTTACCCATAAGTAAACATGACCCCAACGCGTACATGTACTTTTATAACCTATTTGATGTTTCTACGAATTTTAACTAGACAATAAATTGAATGCTTGGAACTCTATTAGAGATAAATTTCAAATTTATATTTAGAAGAACCATTAGCGTTATAAAAAATTGAACATGTCAAACTTTATTAGACAAAAGTTTAATTAAATCTAAAGACTCGTTAGGTTGTTTTTAGGTTAAAAAACTTGTTAGATTCAAAATTTAAGGTCTAAATATTAATTATTAGAGACCAAATAGAATATATTTGGAAGTTTAGGGGATAAATTTTGTTATACAACTTTGATATAGTATAAAATCTATAGCAGAATCTGTGTGCCTAGCAATGCTAGCTGATATAACTTAGGGACCTCAATAATTTTTATTTATTGAACTTTTCTTTATTTGTTGGTCCTCTAAATTGTTTGGAACTAGAATGGTATCTTGTTTCCAACAGCTAGCGGGAGGAATTTAGACAAGGAAACTGAAGATCAGGATTCTGCTAATAAAACTTGCGACAAACAGGAAGTATCTCCGGGCAATGATAACATATCTCAGGACACTGACATGGTTCTCCCTGAGCTCTCGGAGCGTCGAAAGGCTCTGTTTGAGCCCTTAGAACCCGTGAGAAACATCAATGGCCGAAGACCATCAGCTGAATCCTTACTCCCTCCTCCCGATTTTGACGAAACCACTTATCCTCGAGGGTGGCTCATCGGGAAGAAGCGGAAACTTGTCAATGTCGACGTTGTCGAGAGCATGCGGAGGATTGCTGTTCAGGAAATGAATAGAAAGGTTGTGTAATAACTAATTAATTTCATTGTTTACGTAAAAATGTGGCCTCGTTAATTTTTTCAACTGAAAGGCAGTTGGGTTGTGTCGTATAGGACCGAGAAATCAATGGTTTAAACGAGCAGCTCGATGAGGATGCTCGGTGCTTGGAACATCTTCAAATTCAGCTTCTGCAAGAAAAGAGCAAAAGATCAGAAGTTGAAAGGGAGAATGCAATGCTGCATGATCAAATAAACATGCTAATGAGCATGCTAGACAATGAAGGAGCAGATGATGGCTCAGATGAACCTTAAAATAATATATCCCATCACATATTTATACTTAATTTGTTTGTTTTATATTCTTTTTGTAGATTATTTCATGTGGGGGTAGATAAAAAAAAAGTTTCAATTAAATTATATATCCATGAATATACATGCATCCTAGTATTATATTGTCATTATATTGGGATGAAAAAAGTTAATTAGTGGGAG

mRNA sequence

ATGGAACACAATCATTCCGGCAAGATTGATAGGATTCTTGAAGGTTTTTCTCCAGCGTCGGCTCCTCGAATTCAGTGGAATTCTCGCCGGAGGTCAGGTAGTCAAACTAGCGGGAGGAATTTAGACAAGGAAACTGAAGATCAGGATTCTGCTAATAAAACTTGCGACAAACAGGAAGTATCTCCGGGCAATGATAACATATCTCAGGACACTGACATGGTTCTCCCTGAGCTCTCGGAGCGTCGAAAGGCTCTGTTTGAGCCCTTAGAACCCGTGAGAAACATCAATGGCCGAAGACCATCAGCTGAATCCTTACTCCCTCCTCCCGATTTTGACGAAACCACTTATCCTCGAGGGTGGCTCATCGGGAAGAAGCGGAAACTTGTCAATGTCGACGTTGTCGAGAGCATGCGGAGGATTGCTGTTCAGGAAATGAATAGAAAGGACCGAGAAATCAATGGTTTAAACGAGCAGCTCGATGAGGATGCTCGGTGCTTGGAACATCTTCAAATTCAGCTTCTGCAAGAAAAGAGCAAAAGATCAGAAGTTGAAAGGGAGAATGCAATGCTGCATGATCAAATAAACATGCTAATGAGCATGCTAGACAATGAAGGAGCAGATGATGGCTCAGATGAACCTTAA

Coding sequence (CDS)

ATGGAACACAATCATTCCGGCAAGATTGATAGGATTCTTGAAGGTTTTTCTCCAGCGTCGGCTCCTCGAATTCAGTGGAATTCTCGCCGGAGGTCAGGTAGTCAAACTAGCGGGAGGAATTTAGACAAGGAAACTGAAGATCAGGATTCTGCTAATAAAACTTGCGACAAACAGGAAGTATCTCCGGGCAATGATAACATATCTCAGGACACTGACATGGTTCTCCCTGAGCTCTCGGAGCGTCGAAAGGCTCTGTTTGAGCCCTTAGAACCCGTGAGAAACATCAATGGCCGAAGACCATCAGCTGAATCCTTACTCCCTCCTCCCGATTTTGACGAAACCACTTATCCTCGAGGGTGGCTCATCGGGAAGAAGCGGAAACTTGTCAATGTCGACGTTGTCGAGAGCATGCGGAGGATTGCTGTTCAGGAAATGAATAGAAAGGACCGAGAAATCAATGGTTTAAACGAGCAGCTCGATGAGGATGCTCGGTGCTTGGAACATCTTCAAATTCAGCTTCTGCAAGAAAAGAGCAAAAGATCAGAAGTTGAAAGGGAGAATGCAATGCTGCATGATCAAATAAACATGCTAATGAGCATGCTAGACAATGAAGGAGCAGATGATGGCTCAGATGAACCTTAA

Protein sequence

MEHNHSGKIDRILEGFSPASAPRIQWNSRRRSGSQTSGRNLDKETEDQDSANKTCDKQEVSPGNDNISQDTDMVLPELSERRKALFEPLEPVRNINGRRPSAESLLPPPDFDETTYPRGWLIGKKRKLVNVDVVESMRRIAVQEMNRKDREINGLNEQLDEDARCLEHLQIQLLQEKSKRSEVERENAMLHDQINMLMSMLDNEGADDGSDEP
Homology
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BLAST of CsaV3_7G031710 vs. NCBI nr
Match: XP_011659486.1 (PREDICTED: uncharacterized protein LOC101217255 isoform X1 [Cucumis sativus] >KGN45198.1 hypothetical protein Csa_7G430820 [Cucumis sativus])

HSP 1 Score: 418.7 bits (1075), Expect = 1.2e-113
Identity = 213/213 (100.00%), Postives = 213/213 (100.00%), Query Frame = 0 

Query: 1   MEHNHSGKIDRILEGFSPASAPRIQWNSRRRSGSQTSGRNLDKETEDQDSANKTCDKQEV 60
           MEHNHSGKIDRILEGFSPASAPRIQWNSRRRSGSQTSGRNLDKETEDQDSANKTCDKQEV
Sbjct: 1   MEHNHSGKIDRILEGFSPASAPRIQWNSRRRSGSQTSGRNLDKETEDQDSANKTCDKQEV 60

Query: 61  SPGNDNISQDTDMVLPELSERRKALFEPLEPVRNINGRRPSAESLLPPPDFDETTYPRGW 120
           SPGNDNISQDTDMVLPELSERRKALFEPLEPVRNINGRRPSAESLLPPPDFDETTYPRGW
Sbjct: 61  SPGNDNISQDTDMVLPELSERRKALFEPLEPVRNINGRRPSAESLLPPPDFDETTYPRGW 120

Query: 121 LIGKKRKLVNVDVVESMRRIAVQEMNRKDREINGLNEQLDEDARCLEHLQIQLLQEKSKR 180
           LIGKKRKLVNVDVVESMRRIAVQEMNRKDREINGLNEQLDEDARCLEHLQIQLLQEKSKR
Sbjct: 121 LIGKKRKLVNVDVVESMRRIAVQEMNRKDREINGLNEQLDEDARCLEHLQIQLLQEKSKR 180

Query: 181 SEVERENAMLHDQINMLMSMLDNEGADDGSDEP 214
           SEVERENAMLHDQINMLMSMLDNEGADDGSDEP
Sbjct: 181 SEVERENAMLHDQINMLMSMLDNEGADDGSDEP 213

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BLAST of CsaV3_7G031710 vs. NCBI nr
Match: XP_004135890.1 (PREDICTED: uncharacterized protein LOC101217255 isoform X2 [Cucumis sativus])

HSP 1 Score: 406.4 bits (1043), Expect = 6.1e-110
Identity = 209/213 (98.12%), Postives = 209/213 (98.12%), Query Frame = 0 

Query: 1   MEHNHSGKIDRILEGFSPASAPRIQWNSRRRSGSQTSGRNLDKETEDQDSANKTCDKQEV 60
           MEHNHSGKIDRILEGFSPASAPRIQWNSRRRS    SGRNLDKETEDQDSANKTCDKQEV
Sbjct: 1   MEHNHSGKIDRILEGFSPASAPRIQWNSRRRS---ASGRNLDKETEDQDSANKTCDKQEV 60

Query: 61  SPGNDNISQDTDMVLPELSERRKALFEPLEPVRNINGRRPSAESLLPPPDFDETTYPRGW 120
           SPGNDNISQDTDMVLPELSERRKALFEPLEPVRNINGRRPSAESLLPPPDFDETTYPRGW
Sbjct: 61  SPGNDNISQDTDMVLPELSERRKALFEPLEPVRNINGRRPSAESLLPPPDFDETTYPRGW 120

Query: 121 LIGKKRKLVNVDVVESMRRIAVQEMNRKDREINGLNEQLDEDARCLEHLQIQLLQEKSKR 180
           LIGKKRKLVNVDVVESMRRIAVQEMNRKDREINGLNEQLDEDARCLEHLQIQLLQEKSKR
Sbjct: 121 LIGKKRKLVNVDVVESMRRIAVQEMNRKDREINGLNEQLDEDARCLEHLQIQLLQEKSKR 180

Query: 181 SEVERENAMLHDQINMLMSMLDNEGADDGSDEP 214
           SEVERENAMLHDQINMLMSMLDNEGADDGSDEP
Sbjct: 181 SEVERENAMLHDQINMLMSMLDNEGADDGSDEP 210

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BLAST of CsaV3_7G031710 vs. NCBI nr
Match: XP_008461210.1 (PREDICTED: uncharacterized protein LOC103499861 [Cucumis melo])

HSP 1 Score: 384.8 bits (987), Expect = 1.9e-103
Identity = 202/213 (94.84%), Postives = 203/213 (95.31%), Query Frame = 0 

Query: 1   MEHNHSGKIDRILEGFSPASAPRIQWNSRRRSGSQTSGRNLDKETEDQDSANKTCDKQEV 60
           MEHNHSGKIDRILEGFSPASAPRIQWNSRRRS    SGRNL KETEDQDSANKTCDKQE 
Sbjct: 25  MEHNHSGKIDRILEGFSPASAPRIQWNSRRRS---ASGRNLYKETEDQDSANKTCDKQEE 84

Query: 61  SPGNDNISQDTDMVLPELSERRKALFEPLEPVRNINGRRPSAESLLPPPDFDETTYPRGW 120
           SP NDNISQDTD V PELSERRKALFEPLEPVRNINGRRPSAESLLPPPDFDETTYPRGW
Sbjct: 85  SPANDNISQDTDTVPPELSERRKALFEPLEPVRNINGRRPSAESLLPPPDFDETTYPRGW 144

Query: 121 LIGKKRKLVNVDVVESMRRIAVQEMNRKDREINGLNEQLDEDARCLEHLQIQLLQEKSKR 180
           LIGKKRKLVNVDVVESMRRIAVQEMNRKDREI+GLNEQLDEDARCLEHLQIQLLQEKSKR
Sbjct: 145 LIGKKRKLVNVDVVESMRRIAVQEMNRKDREIDGLNEQLDEDARCLEHLQIQLLQEKSKR 204

Query: 181 SEVERENAMLHDQINMLMSMLDNEGADDGSDEP 214
           SEVERENAMLHDQINMLMSMLDNEGA DGSDEP
Sbjct: 205 SEVERENAMLHDQINMLMSMLDNEGA-DGSDEP 233

[Close]
BLAST of CsaV3_7G031710 vs. NCBI nr
Match: XP_022148239.1 (protein HEADING DATE REPRESSOR 1 [Momordica charantia])

HSP 1 Score: 329.3 bits (843), Expect = 9.5e-87
Identity = 178/215 (82.79%), Postives = 192/215 (89.30%), Query Frame = 0 

Query: 1   MEHNHSGKIDRILEGFSPASAPRIQWNSRRRSGSQTSGRNLDKETEDQDSANKTCDKQEV 60
           ME ++SGKIDRILEGFSPASAPRI W SRRRS    SGRNLDK TED DSANK  DKQE 
Sbjct: 1   MERDNSGKIDRILEGFSPASAPRIHWKSRRRS---ASGRNLDKVTEDHDSANKIWDKQE- 60

Query: 61  SPGNDNISQD--TDMVLPELSERRKALFEPLEPVRNINGRRPSAESLLPPPDFDETTYPR 120
            P + + +QD   ++V PELSERR+ALFEPLEPV+NINGRRPSAESLLPPPDFD T YPR
Sbjct: 61  EPHDKDKTQDLEAEVVPPELSERRRALFEPLEPVKNINGRRPSAESLLPPPDFDATAYPR 120

Query: 121 GWLIGKKRKLVNVDVVESMRRIAVQEMNRKDREINGLNEQLDEDARCLEHLQIQLLQEKS 180
           GWLIGKKRKLVNVDVVESMRRIAVQEMNRKDREI+GLNEQLDEDARCLEHLQ+QL+QEKS
Sbjct: 121 GWLIGKKRKLVNVDVVESMRRIAVQEMNRKDREIDGLNEQLDEDARCLEHLQLQLVQEKS 180

Query: 181 KRSEVERENAMLHDQINMLMSMLDNEGADDGSDEP 214
           KRSEVERENAMLHDQINMLM+ML+NEGA DGSDEP
Sbjct: 181 KRSEVERENAMLHDQINMLMNMLENEGA-DGSDEP 210

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BLAST of CsaV3_7G031710 vs. NCBI nr
Match: XP_023004210.1 (protein HEADING DATE REPRESSOR 1 [Cucurbita maxima])

HSP 1 Score: 309.3 bits (791), Expect = 1.0e-80
Identity = 165/213 (77.46%), Postives = 181/213 (84.98%), Query Frame = 0 

Query: 1   MEHNHSGKIDRILEGFSPASAPRIQWNSRRRSGSQTSGRNLDKETEDQDSANKTCDKQEV 60
           M  ++SGK+DRILEGFSPASAPRIQW SRRRS    +GR LD  T+D D+A+KT DK E 
Sbjct: 84  MASDNSGKLDRILEGFSPASAPRIQWKSRRRS---ATGRILDNITQDHDAADKTSDKHEE 143

Query: 61  SPGNDNISQDTDMVLPELSERRKALFEPLEPVRNINGRRPSAESLLPPPDFDETTYPRGW 120
                   Q    + P+LS+RRKALFEPLE ++NINGRRPSAESLLPPPDFD T YPRGW
Sbjct: 144 -------PQPPKTLFPDLSDRRKALFEPLESIKNINGRRPSAESLLPPPDFDATAYPRGW 203

Query: 121 LIGKKRKLVNVDVVESMRRIAVQEMNRKDREINGLNEQLDEDARCLEHLQIQLLQEKSKR 180
           LIGKKRKLVNVDVVESMRRIA+QEMNRKDREINGLNEQLDEDARCLEHLQIQLLQEKSKR
Sbjct: 204 LIGKKRKLVNVDVVESMRRIAIQEMNRKDREINGLNEQLDEDARCLEHLQIQLLQEKSKR 263

Query: 181 SEVERENAMLHDQINMLMSMLDNEGADDGSDEP 214
           SEVERENAMLHDQ++MLMSML+NEGA DG DEP
Sbjct: 264 SEVERENAMLHDQVSMLMSMLENEGA-DGPDEP 285

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BLAST of CsaV3_7G031710 vs. TAIR10
Match: AT1G80940.1 (unknown protein)

HSP 1 Score: 221.9 bits (564), Expect = 3.9e-58
Identity = 121/205 (59.02%), Postives = 154/205 (75.12%), Query Frame = 0 

Query: 10  DRILEGFSPASAPRIQWNSRRRSGSQTSGRNLDKETEDQDSANKTCDKQEVSPGNDNISQ 69
           D  + GF P S  +I W SR+RS       NLDK  E       T +K E++  +     
Sbjct: 16  DGFVGGFFPVSTTKIAWKSRKRSAL----LNLDKAPEAVTEV--TPEKNEITAMDTEKVG 75

Query: 70  DTDMVLPELSERRKALFEPLEPVRNINGRRP-SAESLLPPPDFDETTYPRGWLIGKKRKL 129
           +     P LSE+RKALFEPLEP+ N+NG+RP +A+SLLPPPDF+   YP+GWLIGKKRKL
Sbjct: 76  EPMTTTPLLSEKRKALFEPLEPITNLNGKRPTAADSLLPPPDFETANYPKGWLIGKKRKL 135

Query: 130 VNVDVVESMRRIAVQEMNRKDREINGLNEQLDEDARCLEHLQIQLLQEKSKRSEVERENA 189
           VNVDVVESMRRIAVQEMNRKDREI+GLNEQL+ED+RCLEHLQ+QLLQE+SKR+E+EREN 
Sbjct: 136 VNVDVVESMRRIAVQEMNRKDREIDGLNEQLEEDSRCLEHLQLQLLQERSKRTEIERENT 195

Query: 190 MLHDQINMLMSMLDNEGADDGSDEP 214
           ML +Q++ML++M+  E  ++G++EP
Sbjct: 196 MLKEQVDMLVNMI-QEDDEEGAEEP 213

[Close]
BLAST of CsaV3_7G031710 vs. Swiss-Prot
Match: sp|B8AE37|HDR1_ORYSI (Protein HEADING DATE REPRESSOR 1 OS=Oryza sativa subsp. indica OX=39946 GN=HDR1 PE=3 SV=1)

HSP 1 Score: 203.4 bits (516), Expect = 2.6e-51
Identity = 124/206 (60.19%), Postives = 149/206 (72.33%), Query Frame = 0 

Query: 18  PASA--PRIQWNSRRRSGSQTSGRNLDKE--TEDQDSANKTCDKQEVSPGND-NISQDTD 77
           PASA  PRI W SRRRS S  +GR+L +E   E  D         E    +D N     D
Sbjct: 4   PASADPPRIFWKSRRRSAS-ANGRSLQQELNKEAADXXXXXXXXXEAMKIDDANAVSTDD 63

Query: 78  MVLPE----LSERRKALFEPLEPVRNINGRRPSAESLLPPPDFDETTYPRGWLIGKKRKL 137
            V P+    LSE+RKALFEPLEP   ING+R SAE LLPPPDF+  +YP+GWL+GKKRKL
Sbjct: 64  DVHPDPKANLSEKRKALFEPLEP---INGKRSSAEMLLPPPDFEPASYPKGWLVGKKRKL 123

Query: 138 VNVDVVESMRRIAVQEMNRKDREINGLNEQLDEDARCLEHLQIQLLQEKSKRSEVERENA 197
           VNVDVVESMRRIA+QEMNRKDREINGLNEQL+ED+R LE LQ QL  E+ KR+E+E+EN+
Sbjct: 124 VNVDVVESMRRIAIQEMNRKDREINGLNEQLEEDSRVLELLQKQLADERKKRTEIEKENS 183

Query: 198 MLHDQINMLMSMLD-NEGADDGSDEP 214
           MLH+Q++MLM+MLD NE  D+  + P
Sbjct: 184 MLHEQVSMLMNMLDENEAFDEEGEAP 205

[Close]
BLAST of CsaV3_7G031710 vs. Swiss-Prot
Match: sp|Q6K678|HDR1_ORYSJ (Protein HEADING DATE REPRESSOR 1 OS=Oryza sativa subsp. japonica OX=39947 GN=HDR1 PE=1 SV=1)

HSP 1 Score: 203.4 bits (516), Expect = 2.6e-51
Identity = 124/206 (60.19%), Postives = 149/206 (72.33%), Query Frame = 0 

Query: 18  PASA--PRIQWNSRRRSGSQTSGRNLDKE--TEDQDSANKTCDKQEVSPGND-NISQDTD 77
           PASA  PRI W SRRRS S  +GR+L +E   E  D         E    +D N     D
Sbjct: 4   PASADPPRIFWKSRRRSAS-ANGRSLQQELNKEAADXXXXXXXXXEAMKIDDANAVSTDD 63

Query: 78  MVLPE----LSERRKALFEPLEPVRNINGRRPSAESLLPPPDFDETTYPRGWLIGKKRKL 137
            V P+    LSE+RKALFEPLEP   ING+R SAE LLPPPDF+  +YP+GWL+GKKRKL
Sbjct: 64  DVHPDPKANLSEKRKALFEPLEP---INGKRSSAEMLLPPPDFEPASYPKGWLVGKKRKL 123

Query: 138 VNVDVVESMRRIAVQEMNRKDREINGLNEQLDEDARCLEHLQIQLLQEKSKRSEVERENA 197
           VNVDVVESMRRIA+QEMNRKDREINGLNEQL+ED+R LE LQ QL  E+ KR+E+E+EN+
Sbjct: 124 VNVDVVESMRRIAIQEMNRKDREINGLNEQLEEDSRVLELLQKQLADERKKRTEIEKENS 183

Query: 198 MLHDQINMLMSMLD-NEGADDGSDEP 214
           MLH+Q++MLM+MLD NE  D+  + P
Sbjct: 184 MLHEQVSMLMNMLDENEAFDEEGEAP 205

[Close]
BLAST of CsaV3_7G031710 vs. TrEMBL
Match: tr|A0A0A0K6R3|A0A0A0K6R3_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_7G430820 PE=4 SV=1)

HSP 1 Score: 418.7 bits (1075), Expect = 7.9e-114
Identity = 213/213 (100.00%), Postives = 213/213 (100.00%), Query Frame = 0 

Query: 1   MEHNHSGKIDRILEGFSPASAPRIQWNSRRRSGSQTSGRNLDKETEDQDSANKTCDKQEV 60
           MEHNHSGKIDRILEGFSPASAPRIQWNSRRRSGSQTSGRNLDKETEDQDSANKTCDKQEV
Sbjct: 1   MEHNHSGKIDRILEGFSPASAPRIQWNSRRRSGSQTSGRNLDKETEDQDSANKTCDKQEV 60

Query: 61  SPGNDNISQDTDMVLPELSERRKALFEPLEPVRNINGRRPSAESLLPPPDFDETTYPRGW 120
           SPGNDNISQDTDMVLPELSERRKALFEPLEPVRNINGRRPSAESLLPPPDFDETTYPRGW
Sbjct: 61  SPGNDNISQDTDMVLPELSERRKALFEPLEPVRNINGRRPSAESLLPPPDFDETTYPRGW 120

Query: 121 LIGKKRKLVNVDVVESMRRIAVQEMNRKDREINGLNEQLDEDARCLEHLQIQLLQEKSKR 180
           LIGKKRKLVNVDVVESMRRIAVQEMNRKDREINGLNEQLDEDARCLEHLQIQLLQEKSKR
Sbjct: 121 LIGKKRKLVNVDVVESMRRIAVQEMNRKDREINGLNEQLDEDARCLEHLQIQLLQEKSKR 180

Query: 181 SEVERENAMLHDQINMLMSMLDNEGADDGSDEP 214
           SEVERENAMLHDQINMLMSMLDNEGADDGSDEP
Sbjct: 181 SEVERENAMLHDQINMLMSMLDNEGADDGSDEP 213

[Close]
BLAST of CsaV3_7G031710 vs. TrEMBL
Match: tr|A0A1S3CE60|A0A1S3CE60_CUCME (uncharacterized protein LOC103499861 OS=Cucumis melo OX=3656 GN=LOC103499861 PE=4 SV=1)

HSP 1 Score: 384.8 bits (987), Expect = 1.3e-103
Identity = 202/213 (94.84%), Postives = 203/213 (95.31%), Query Frame = 0 

Query: 1   MEHNHSGKIDRILEGFSPASAPRIQWNSRRRSGSQTSGRNLDKETEDQDSANKTCDKQEV 60
           MEHNHSGKIDRILEGFSPASAPRIQWNSRRRS    SGRNL KETEDQDSANKTCDKQE 
Sbjct: 25  MEHNHSGKIDRILEGFSPASAPRIQWNSRRRS---ASGRNLYKETEDQDSANKTCDKQEE 84

Query: 61  SPGNDNISQDTDMVLPELSERRKALFEPLEPVRNINGRRPSAESLLPPPDFDETTYPRGW 120
           SP NDNISQDTD V PELSERRKALFEPLEPVRNINGRRPSAESLLPPPDFDETTYPRGW
Sbjct: 85  SPANDNISQDTDTVPPELSERRKALFEPLEPVRNINGRRPSAESLLPPPDFDETTYPRGW 144

Query: 121 LIGKKRKLVNVDVVESMRRIAVQEMNRKDREINGLNEQLDEDARCLEHLQIQLLQEKSKR 180
           LIGKKRKLVNVDVVESMRRIAVQEMNRKDREI+GLNEQLDEDARCLEHLQIQLLQEKSKR
Sbjct: 145 LIGKKRKLVNVDVVESMRRIAVQEMNRKDREIDGLNEQLDEDARCLEHLQIQLLQEKSKR 204

Query: 181 SEVERENAMLHDQINMLMSMLDNEGADDGSDEP 214
           SEVERENAMLHDQINMLMSMLDNEGA DGSDEP
Sbjct: 205 SEVERENAMLHDQINMLMSMLDNEGA-DGSDEP 233

[Close]
BLAST of CsaV3_7G031710 vs. TrEMBL
Match: tr|A0A2C9V135|A0A2C9V135_MANES (Uncharacterized protein OS=Manihot esculenta OX=3983 GN=MANES_11G069200 PE=4 SV=1)

HSP 1 Score: 280.0 bits (715), Expect = 4.4e-72
Identity = 158/223 (70.85%), Postives = 175/223 (78.48%), Query Frame = 0 

Query: 4   NHSGK--IDRILEGFSPASAPRIQWNSRRRSGSQTSGRNLDKETEDQDSANKTCDKQEVS 63
           N  GK  +D +L+GFSP S PRI W SRRRS    SGRNLDK T+  D+A +T  KQE  
Sbjct: 19  NKDGKKVLDGLLDGFSPVSTPRIFWKSRRRS---ASGRNLDKVTD--DTAKETPSKQE-- 78

Query: 64  PGNDNISQDTDM----VLPELSERRKALFEPLEPVRNINGRRPSAESLLPPPDFDETTYP 123
                IS D DM     LPELSERRKALFEPLEPV NING+RPSAESLLPPPDFD  +YP
Sbjct: 79  ----EISNDEDMQEPKELPELSERRKALFEPLEPVTNINGKRPSAESLLPPPDFDSASYP 138

Query: 124 RGWLIGKKRKLVNVDVVESMRRIAVQEMNRKDREINGLNEQLDEDARCLEHLQIQLLQEK 183
           +GWLIGKKRKLVNVDVVESMRRIAVQEMNRKDREINGLNEQL+EDARCLEHLQ+QLLQE+
Sbjct: 139 KGWLIGKKRKLVNVDVVESMRRIAVQEMNRKDREINGLNEQLEEDARCLEHLQLQLLQER 198

Query: 184 SKRSEVERENAMLHDQINMLMSML-------DNEGADDGSDEP 214
           SKR+EVERENAMLHDQI+MLM+M+       D    D+G DEP
Sbjct: 199 SKRAEVERENAMLHDQISMLMNMIEENEQMGDQGATDEGPDEP 230

[Close]
BLAST of CsaV3_7G031710 vs. TrEMBL
Match: tr|A0A067LBS6|A0A067LBS6_JATCU (Uncharacterized protein OS=Jatropha curcas OX=180498 GN=JCGZ_26963 PE=4 SV=1)

HSP 1 Score: 272.7 bits (696), Expect = 7.0e-70
Identity = 150/214 (70.09%), Postives = 175/214 (81.78%), Query Frame = 0 

Query: 8   KIDRILEGFSPASAPRIQWNSRRRSGSQTSGRNLDKETEDQDSANKTCDKQEVSPGNDNI 67
           K+D +L+GFSP S P+I WNSR+RS    +GRNLDK T+  DSAN+T  KQE SP  D  
Sbjct: 18  KVDGVLDGFSPVSTPKIFWNSRKRS---ATGRNLDKLTD--DSANETPQKQEESPDVDEK 77

Query: 68  SQDTDMVLPELSERRKALFEPLEPVRNINGRRPSAESLLPPPDFDETTYPRGWLIGKKRK 127
             ++   L ELSERRKALFEPLEPV+N+NG+RPSAESLLPPPDFD  +YP+GWLIGKKRK
Sbjct: 78  MHESSAAL-ELSERRKALFEPLEPVKNVNGKRPSAESLLPPPDFDAASYPKGWLIGKKRK 137

Query: 128 LVNVDVVESMRRIAVQEMNRKDREINGLNEQLDEDARCLEHLQIQLLQEKSKRSEVEREN 187
           LVNVDVVESMRRIAVQEMNRKDREI+GLNEQL+EDARCLEHLQ+QLL E+SKRSEVER N
Sbjct: 138 LVNVDVVESMRRIAVQEMNRKDREIDGLNEQLEEDARCLEHLQLQLLDERSKRSEVERAN 197

Query: 188 AMLHDQINMLMSML------DNEGA--DDGSDEP 214
           A+L DQI+MLM+ML      D+E A  D+G +EP
Sbjct: 198 ALLQDQISMLMNMLQENEQMDDEDAAGDEGPNEP 225

[Close]
BLAST of CsaV3_7G031710 vs. TrEMBL
Match: tr|M5WV98|M5WV98_PRUPE (Uncharacterized protein OS=Prunus persica OX=3760 GN=PRUPE_ppa011418mg PE=4 SV=1)

HSP 1 Score: 271.6 bits (693), Expect = 1.6e-69
Identity = 152/208 (73.08%), Postives = 169/208 (81.25%), Query Frame = 0 

Query: 8   KIDRILEGFSPASAPRIQWNSRRRSGSQTSGRNLDKETEDQDSANKTCDKQEVSPGNDNI 67
           K D  LEGF+P S+ RI W  R+RSG  TSGRN+DK TE  D+AN T +KQE  P  +  
Sbjct: 10  KADGALEGFAPLSSTRIDWKPRKRSG--TSGRNVDKITE--DTANNTPNKQE-EPVTEEE 69

Query: 68  SQDTDMVLPELSERRKALFEPLEPVRNINGRRPSAESLLPPPDFDETTYPRGWLIGKKRK 127
            QD     PELSERRKALFEPLEPV NING+RPSAESLLPPPDFD TTYP+GWLIGKKRK
Sbjct: 70  MQDL-APAPELSERRKALFEPLEPVTNINGKRPSAESLLPPPDFDATTYPKGWLIGKKRK 129

Query: 128 LVNVDVVESMRRIAVQEMNRKDREINGLNEQLDEDARCLEHLQIQLLQEKSKRSEVEREN 187
           LVNVDVVESMRRIAVQEMNRKDREI+GLNEQL+EDARCLEHLQ+QLLQE+SKRSEVEREN
Sbjct: 130 LVNVDVVESMRRIAVQEMNRKDREIDGLNEQLEEDARCLEHLQLQLLQERSKRSEVEREN 189

Query: 188 AMLHDQINMLMSML--DNEGADDGSDEP 214
            ML DQ+ MLM+ML  D+   D+G D P
Sbjct: 190 GMLQDQVTMLMNMLGEDDPVDDEGPDAP 211

The following BLAST results are available for this feature:
BLAST of CsaV3_7G031710 vs. NCBI nr
Match NameE-valueIdentityDescription
XP_011659486.11.2e-113100.00PREDICTED: uncharacterized protein LOC101217255 isoform X1 [Cucumis sativus] >KG... [more]
XP_004135890.16.1e-11098.12PREDICTED: uncharacterized protein LOC101217255 isoform X2 [Cucumis sativus][more]
XP_008461210.11.9e-10394.84PREDICTED: uncharacterized protein LOC103499861 [Cucumis melo][more]
XP_022148239.19.5e-8782.79protein HEADING DATE REPRESSOR 1 [Momordica charantia][more]
XP_023004210.11.0e-8077.46protein HEADING DATE REPRESSOR 1 [Cucurbita maxima][more]
BLAST of CsaV3_7G031710 vs. TAIR10
Match NameE-valueIdentityDescription
AT1G80940.13.9e-5859.02unknown protein[more]
BLAST of CsaV3_7G031710 vs. Swiss-Prot
Match NameE-valueIdentityDescription
sp|B8AE37|HDR1_ORYSI2.6e-5160.19Protein HEADING DATE REPRESSOR 1 OS=Oryza sativa subsp. indica OX=39946 GN=HDR1 ... [more]
sp|Q6K678|HDR1_ORYSJ2.6e-5160.19Protein HEADING DATE REPRESSOR 1 OS=Oryza sativa subsp. japonica OX=39947 GN=HDR... [more]
BLAST of CsaV3_7G031710 vs. TrEMBL
Match NameE-valueIdentityDescription
tr|A0A0A0K6R3|A0A0A0K6R3_CUCSA7.9e-114100.00Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_7G430820 PE=4 SV=1[more]
tr|A0A1S3CE60|A0A1S3CE60_CUCME1.3e-10394.84uncharacterized protein LOC103499861 OS=Cucumis melo OX=3656 GN=LOC103499861 PE=... [more]
tr|A0A2C9V135|A0A2C9V135_MANES4.4e-7270.85Uncharacterized protein OS=Manihot esculenta OX=3983 GN=MANES_11G069200 PE=4 SV=... [more]
tr|A0A067LBS6|A0A067LBS6_JATCU7.0e-7070.09Uncharacterized protein OS=Jatropha curcas OX=180498 GN=JCGZ_26963 PE=4 SV=1[more]
tr|M5WV98|M5WV98_PRUPE1.6e-6973.08Uncharacterized protein OS=Prunus persica OX=3760 GN=PRUPE_ppa011418mg PE=4 SV=1[more]
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: Biological Process
TermDefinition
GO:0009909regulation of flower development
Vocabulary: INTERPRO
TermDefinition
IPR038864HDR1
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0009909 regulation of flower development
biological_process GO:0008150 biological_process
biological_process GO:0016310 phosphorylation
cellular_component GO:0005575 cellular_component
molecular_function GO:0003674 molecular_function
molecular_function GO:0016301 kinase activity
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
CsaV3_7G031710.1CsaV3_7G031710.1mRNA


InterPro
Analysis Name: InterPro Annotations of cucumber chineselong genome (v3)
Date Performed: 2019-03-04
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 166..186
NoneNo IPR availableCOILSCoilCoilcoord: 138..158
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 55..71
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 36..54
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 21..35
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1..71
IPR038864Protein heading date repressor 1PANTHERPTHR37205FAMILY NOT NAMEDcoord: 4..210

Synteny
The following gene(s) are orthologous to this gene:
GeneOrthologueOrganismBlock
CsaV3_7G031710CSPI07G19910Wild cucumber (PI 183967)cpicucB414
CsaV3_7G031710Cucsa.106110Cucumber (Gy14) v1cgycucB131
CsaV3_7G031710CmaCh08G005780Cucurbita maxima (Rimu)cmacucB1084
CsaV3_7G031710CmoCh17G008830Cucurbita moschata (Rifu)cmocucB0455
CsaV3_7G031710CmoCh08G005690Cucurbita moschata (Rifu)cmocucB1066
CsaV3_7G031710Cp4.1LG17g08560Cucurbita pepo (Zucchini)cpecucB0422
CsaV3_7G031710CsGy7G018190Cucumber (Gy14) v2cgybcucB347
CsaV3_7G031710Carg18722Silver-seed gourdcarcucB0390
CsaV3_7G031710Carg13490Silver-seed gourdcarcucB0486
CsaV3_7G031710Cla015306Watermelon (97103) v1cucwmB591
CsaV3_7G031710MELO3C023486Melon (DHL92) v3.5.1cucmeB537
CsaV3_7G031710ClCG09G003490Watermelon (Charleston Gray)cucwcgB546
CsaV3_7G031710Lsi02G026450Bottle gourd (USVL1VR-Ls)cuclsiB538
CsaV3_7G031710MELO3C023486.2Melon (DHL92) v3.6.1cucmedB525
CsaV3_7G031710Cla97C09G165730Watermelon (97103) v2cucwmbB592
CsaV3_7G031710Bhi09G000451Wax gourdcucwgoB730
The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:
GeneOrganismBlock
CsaV3_7G031710Cucumber (Chinese Long) v3cuccucB154
CsaV3_7G031710Cucumber (Gy14) v2cgybcucB154
CsaV3_7G031710Cucurbita maxima (Rimu)cmacucB0462
CsaV3_7G031710Cucurbita maxima (Rimu)cmacucB0595
CsaV3_7G031710Cucurbita moschata (Rifu)cmocucB0582
CsaV3_7G031710Cucurbita pepo (Zucchini)cpecucB0188
CsaV3_7G031710Cucurbita pepo (Zucchini)cpecucB0726
CsaV3_7G031710Wild cucumber (PI 183967)cpicucB191
CsaV3_7G031710Watermelon (Charleston Gray)cucwcgB555