Cp4.1LG16g08480 (gene) Cucurbita pepo (Zucchini)
The following sequences are available for this feature:
Legend: CDS Hold the cursor over a type above to highlight its positions in the sequence below.ATGAAGAACATGGAGTTTTACAGTGCGCCATCCAGTCCGAAGCGCTACAAATCTCCGTTTGGACATTCTCGTCCAAACTCTACCATAGATGAGTTTGAATTCGAAACTAGCTCCCGTTTCAATCTTAACGACGTCGATTTCGATCTAGAGGATCGGCCAGAGAAACAAAGCAAGAAACGAGTGCAAATCGAAGATGCATCCTTACCTGCGATGGCGTTTGCCGATGAACTATTTTCAGACGGGAAGGTCCTTCCCCTTCCTCCTCGGCTCAAGATTCCCCCGCCTCATGAACGCCTCAACGAACATCGCAGCGGCAAAAGCTCCACCACATCGTCGCCTCGATCACCGGTCGCGGCGCTCAAAATCAAATTTGTTCATCAGAATTTGTGGAACGATGAATTTGATCCTTTCTCGGTAGCCTTACAGAACGTGAAGAAAGACGGAACGGGGAAAACGCAAGAAAACAGTAATGGGCCCGAATCGGCCCACTCACCATTTCCACGAAGGCCGAGCAACTCAACAGAACAAATTATGGGCCTCCAGTTACCCCATCGGCAGCCCAATTTGAAAAATGGACCGGTAGAAAACCCAAAACTGTTCATTGAACCCAATGGATTGGCATTTGCAAGAGCAGTTGTGAATATGGACCGGGAAACCGGGAGCCGGTTCAACAGGTTCATAACGTCGGGGCCCATTTTGAAGTCGACCGGAAATCGCAGAAATGGCAACCGGTTTTGTACATGGAAGAGAAACAAGCTTAGCAAACTTCTATCCTTATTTGCAAAGCTCGGTCTCAAGTCCGCGAGATCAGCCACATAA ATGAAGAACATGGAGTTTTACAGTGCGCCATCCAGTCCGAAGCGCTACAAATCTCCGTTTGGACATTCTCGTCCAAACTCTACCATAGATGAGTTTGAATTCGAAACTAGCTCCCGTTTCAATCTTAACGACGTCGATTTCGATCTAGAGGATCGGCCAGAGAAACAAAGCAAGAAACGAGTGCAAATCGAAGATGCATCCTTACCTGCGATGGCGTTTGCCGATGAACTATTTTCAGACGGGAAGGTCCTTCCCCTTCCTCCTCGGCTCAAGATTCCCCCGCCTCATGAACGCCTCAACGAACATCGCAGCGGCAAAAGCTCCACCACATCGTCGCCTCGATCACCGGTCGCGGCGCTCAAAATCAAATTTGTTCATCAGAATTTGTGGAACGATGAATTTGATCCTTTCTCGGTAGCCTTACAGAACGTGAAGAAAGACGGAACGGGGAAAACGCAAGAAAACAGTAATGGGCCCGAATCGGCCCACTCACCATTTCCACGAAGGCCGAGCAACTCAACAGAACAAATTATGGGCCTCCAGTTACCCCATCGGCAGCCCAATTTGAAAAATGGACCGGTAGAAAACCCAAAACTGTTCATTGAACCCAATGGATTGGCATTTGCAAGAGCAGTTGTGAATATGGACCGGGAAACCGGGAGCCGGTTCAACAGGTTCATAACGTCGGGGCCCATTTTGAAGTCGACCGGAAATCGCAGAAATGGCAACCGGTTTTGTACATGGAAGAGAAACAAGCTTAGCAAACTTCTATCCTTATTTGCAAAGCTCGGTCTCAAGTCCGCGAGATCAGCCACATAA ATGAAGAACATGGAGTTTTACAGTGCGCCATCCAGTCCGAAGCGCTACAAATCTCCGTTTGGACATTCTCGTCCAAACTCTACCATAGATGAGTTTGAATTCGAAACTAGCTCCCGTTTCAATCTTAACGACGTCGATTTCGATCTAGAGGATCGGCCAGAGAAACAAAGCAAGAAACGAGTGCAAATCGAAGATGCATCCTTACCTGCGATGGCGTTTGCCGATGAACTATTTTCAGACGGGAAGGTCCTTCCCCTTCCTCCTCGGCTCAAGATTCCCCCGCCTCATGAACGCCTCAACGAACATCGCAGCGGCAAAAGCTCCACCACATCGTCGCCTCGATCACCGGTCGCGGCGCTCAAAATCAAATTTGTTCATCAGAATTTGTGGAACGATGAATTTGATCCTTTCTCGGTAGCCTTACAGAACGTGAAGAAAGACGGAACGGGGAAAACGCAAGAAAACAGTAATGGGCCCGAATCGGCCCACTCACCATTTCCACGAAGGCCGAGCAACTCAACAGAACAAATTATGGGCCTCCAGTTACCCCATCGGCAGCCCAATTTGAAAAATGGACCGGTAGAAAACCCAAAACTGTTCATTGAACCCAATGGATTGGCATTTGCAAGAGCAGTTGTGAATATGGACCGGGAAACCGGGAGCCGGTTCAACAGGTTCATAACGTCGGGGCCCATTTTGAAGTCGACCGGAAATCGCAGAAATGGCAACCGGTTTTGTACATGGAAGAGAAACAAGCTTAGCAAACTTCTATCCTTATTTGCAAAGCTCGGTCTCAAGTCCGCGAGATCAGCCACATAA MKNMEFYSAPSSPKRYKSPFGHSRPNSTIDEFEFETSSRFNLNDVDFDLEDRPEKQSKKRVQIEDASLPAMAFADELFSDGKVLPLPPRLKIPPPHERLNEHRSGKSSTTSSPRSPVAALKIKFVHQNLWNDEFDPFSVALQNVKKDGTGKTQENSNGPESAHSPFPRRPSNSTEQIMGLQLPHRQPNLKNGPVENPKLFIEPNGLAFARAVVNMDRETGSRFNRFITSGPILKSTGNRRNGNRFCTWKRNKLSKLLSLFAKLGLKSARSAT
BLAST of Cp4.1LG16g08480 vs. TrEMBL
Match: A0A0A0KEI4_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_6G429640 PE=4 SV=1) HSP 1 Score: 413.3 bits (1061), Expect = 2.3e-112 Identity = 206/270 (76.30%), Postives = 231/270 (85.56%), Query Frame = 1
BLAST of Cp4.1LG16g08480 vs. TrEMBL
Match: A0A061GTX6_THECC (Uncharacterized protein OS=Theobroma cacao GN=TCM_040878 PE=4 SV=1) HSP 1 Score: 129.8 bits (325), Expect = 5.0e-27 Identity = 96/247 (38.87%), Postives = 133/247 (53.85%), Query Frame = 1
BLAST of Cp4.1LG16g08480 vs. TrEMBL
Match: A0A0B2PTX7_GLYSO (Uncharacterized protein OS=Glycine soja GN=glysoja_047262 PE=4 SV=1) HSP 1 Score: 126.7 bits (317), Expect = 4.3e-26 Identity = 104/291 (35.74%), Postives = 147/291 (50.52%), Query Frame = 1
BLAST of Cp4.1LG16g08480 vs. TrEMBL
Match: I1M763_SOYBN (Uncharacterized protein OS=Glycine max GN=GLYMA_14G036400 PE=4 SV=1) HSP 1 Score: 126.3 bits (316), Expect = 5.6e-26 Identity = 104/291 (35.74%), Postives = 146/291 (50.17%), Query Frame = 1
BLAST of Cp4.1LG16g08480 vs. TrEMBL
Match: A0A151U1S1_CAJCA (Uncharacterized protein OS=Cajanus cajan GN=KK1_005850 PE=4 SV=1) HSP 1 Score: 126.3 bits (316), Expect = 5.6e-26 Identity = 84/177 (47.46%), Postives = 106/177 (59.89%), Query Frame = 1
BLAST of Cp4.1LG16g08480 vs. TAIR10
Match: AT2G26530.1 (AT2G26530.1 Protein of unknown function (DUF1645)) HSP 1 Score: 52.8 bits (125), Expect = 4.0e-07 Identity = 54/182 (29.67%), Postives = 78/182 (42.86%), Query Frame = 1
BLAST of Cp4.1LG16g08480 vs. NCBI nr
Match: gi|700192881|gb|KGN48085.1| (hypothetical protein Csa_6G429640 [Cucumis sativus]) HSP 1 Score: 413.3 bits (1061), Expect = 3.3e-112 Identity = 206/270 (76.30%), Postives = 231/270 (85.56%), Query Frame = 1
BLAST of Cp4.1LG16g08480 vs. NCBI nr
Match: gi|1009114181|ref|XP_015873544.1| (PREDICTED: uncharacterized protein LOC107410609 [Ziziphus jujuba]) HSP 1 Score: 142.5 bits (358), Expect = 1.1e-30 Identity = 111/316 (35.13%), Postives = 161/316 (50.95%), Query Frame = 1
BLAST of Cp4.1LG16g08480 vs. NCBI nr
Match: gi|590584684|ref|XP_007015244.1| (Uncharacterized protein TCM_040878 [Theobroma cacao]) HSP 1 Score: 129.8 bits (325), Expect = 7.2e-27 Identity = 96/247 (38.87%), Postives = 133/247 (53.85%), Query Frame = 1
BLAST of Cp4.1LG16g08480 vs. NCBI nr
Match: gi|734346201|gb|KHN11012.1| (hypothetical protein glysoja_047262 [Glycine soja]) HSP 1 Score: 126.7 bits (317), Expect = 6.1e-26 Identity = 104/291 (35.74%), Postives = 147/291 (50.52%), Query Frame = 1
BLAST of Cp4.1LG16g08480 vs. NCBI nr
Match: gi|1012362052|gb|KYP73235.1| (hypothetical protein KK1_005850 [Cajanus cajan]) HSP 1 Score: 126.3 bits (316), Expect = 8.0e-26 Identity = 84/177 (47.46%), Postives = 106/177 (59.89%), Query Frame = 1
The following BLAST results are available for this feature:
The following terms have been associated with this gene:
GO Assignments
This gene is annotated with the following GO terms.
The following mRNA feature(s) are a part of this gene:
Analysis Name: InterPro Annotations of Cucurbita pepo
Date Performed: 2017-12-02
The following gene(s) are orthologous to this gene:
The following gene(s) are paralogous to this gene:
The following block(s) are covering this gene:
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