Cp4.1LG12g05800 (gene) Cucurbita pepo (Zucchini) | Cucurbit Genomics Database (CuGenDB)

Overview


Name	Cp4.1LG12g05800
Type	gene
Organism	Cucurbita pepo (Cucurbita pepo (Zucchini))
Description	Mitochondrial import inner membrane translocase subunit Tim17/Tim22/Tim23 family protein
Location	Cp4.1LG12 : 7981701 .. 7984765 (+)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

TGCATACGACTCCCCAAGGAACTTGAGAACTGAAAGATGGAAGACGAGCTCAACGGCGTCGTTCCATGTTCTTCCCTCGCCGTCGAATCCACCATTCGCGTCGGAACGGTGAACTTCACGAACAATTTCTTGAACTATGATTCGTTTTCTGTAACTTCTCCATCTGAATCTCTTTCCCCTGCTCATGTTCAGGCCGGCGCTCTATGGGGCTTGTGTATGGGTCCGTACAATTCTCGTAAAAATGGTAATCTGAAGCACAAATTTCGACAATATATTTTATTCCTTTGATTCTTATTGCAATTTCTCTTCTTCATTTCATTCGTTTTCTCTCTTACAGGCCTCAGTGGCGTCGACCATGCTGCTTTCGTGGTATCATATACTTGCTATTTTGTTTTGATTTCCGATTATTTGGATGAGATGGTAGCATTGTGGCGTTTGTCCGATTTGAAAGTGTCTTTGTGGTCTATTTTTCAGGCGAAGTCTGTTGGAAAGAACGGCTTTCAATGTGGTAATGGTTGATTGTCTTAGCGTTTTGGCCTTTACAGATTGTTGAGCTGTGTTTGTGGCTGATTCTTTTTTGCTTGGTTTTGTTTGTTAGACGAACACGACTCTCCACAATCGTATGATATTGTCCACTTTGAGCATAAGCTCTCATGGCTTTGCTTTGGGTTTCCCCAAAATGCCTCGTACCAATGGAGAGAGTATTCTTTGTTTATAAACCCATGATCATTCGCTAAATTAGTCGACGTGGGACTTCCATCATCCAACATTGTTCTGGTCAAAGAAGTAGCTAAAGATATTGGGTTATAGGACTTGTTGCTGTAACTTTTACTCTGACACTCTGTGGGATTCAAAGATACAGAAGGAAGAATGATTGGGTTAGTTACACTCATGAAATGATTCGTTTTCACCATTTTCCTTTGTTTGAATGTGATCCACCGTGAAGGTTGTCATGTAACGGGCATGCGGCCATAGGCAACATGTCTTGGACAAGCATGACCGTGACACCTAACTACATTCCCAGAACTTTGACTCGATTTCTATTGAATGCTTTGTGTATCTAGATCCTACAAGTTATCTAATATATATATATATATATACACACACAACTTATGATAAGCACATATGGATTTGTATTATACCTGCACCCTAATTATGGCATGAGCCACATTTTTGCAGCTACTTTCAAAATATTTATTTGGGTATCTCTTAAATTTTAACAGGATTTTGAGTGAAGGTTGTCTAGGATGACCAGGAATGGCTCAATTCTTACCACCTGAGTATTTTTTGAGGGAAAAAAATGGGTGAGTGGATATATAAACGACACTAGCAAGGATTTGGATGATATCATTTAACCGGAGAGGAACAATCTCCCCTTTTTACAGTTTATCATGTTATATGTGTCTTAAAGCCTTTTTTAGTAGTTTTATTGTTATTCGTCCTTATTTTTGGTTACGTAAAAGTTAAGGTCGTTGAAATACACATTTAAAAACTTATGTAGAAATCCCGAGTCATTTATGTGACGAGCTTTCTCCAATTATGTTGCAATTGTGGCTGAAGAAAGAAACACCTTTTAACTTGGAATTATTAGTGTTGTCTCTTGGTAGATGAAACCTCAATAGTCATAATTGTCTCTCGAATTCGACAACCATTTATGTAGACTTATATTTACATCGAGAATTTATTGTGCCTTCATGTATCTTGTTTAAAAGAAAAAGATAGTTACTGCTTAATATGTTGAGACTTGCCGTATCATACTACAACTGTTTCCTGTTCTAAAAAGTACATCGAAATTTACAGTTTTCTTTGGCATGCCGAGAGGAGGTTCGATACTTGCTGCGTTTTATGTCTGGTCGTGGGTGTTCGTGTCGAGTTTTTGAAATTATCCGTTAGGCCTGTACTCTTTTGGATTAGAGCTTTTCTTGTAGGTTAGGTTCTGGTTGGCATCCTTTTTTTGGGCAGCCGTTTTTATAGACCTGTCTTTTGCTGNTTGCTTTTTTTTTTTTTTTTTTGCCTCATTTTCTCTGGATGAAAGTTCGGGTTTCTTGGTTGAAAAAGTTTGGTCCTTAGTTGTTGCATATCTTATATTCAACACCTATTGCTTGGCTTACAAGTATTGGGATATGAGATATGCAGCATCTTTTTGGGCATGTATGTTTGCTAAACAGGTGATTTTTGCTTTCATTTTGACTATCATATTTCGAACGATTATGATGCCAGAAATACTATCTATTTAGACACTATGTTAAGAGAAACTTTTGGAAATGAATCTTTAAATCTCCTTTTTGTTTTGTTTTCCCCCCATTTGGCAGCTAAACAGATCGATTGCGGGTGCGGTCGCAGGAGCTGCAATTGCTACAAGGACTAGAAGAAGTTGGTCGCAGGTTGTTGGGATGGCTGCCCTTGTGTCTGCCTTCAGTGCTGCAGCTGAATATTCAAGATCACTTTAGAATACCTCTTGTGGGAAGAACAAAACCATGAGGTATTCACCATTCAATCCATTTCCATTACTTGTGAATGACATGCTGCATGCCCAAAATTCAGCAAATGTTGGTCCTGTATCGGTTGAAGGAGGGAGGGACCGGAACCTCGTTATGTCGTTTCCACTCAATTCTTCACAATTGCAGCTAACTTCTGGTGAGTTAAAAGCTGTAAATGATGGAAAAGCCGTGTACCAGCTTTCTAGTGGCCTACAATGACTGCTCTACTAAAGATGATGTTTACTAAAGATGAAAAACTATCGTATAGTATATTATAGTCAAATATCTTGTATGATTGAGGATATTTTACCTTCCATTACGGTTTACTGTAGGCATCATATTTGATAGACAAATATCTTGTATGATATTTAGCCTTCCATTACGATTTACCGTAAGTTTAATATTTATAAAAAGGCAGATAGAGGAACCAAATTGCAACCATATGTAAACCTCGAAAGTAAGTTGCGTAAGAAAATTCAAATTCCCAAATGCAACCTAACTCGATAGAATGTGAGTTTTTTCAAATAAATCAATTTAGACATTACCTAAATAACATTACTTTCCTTTTCTTACTAAAATACCAAC

mRNA sequence

TGCATACGACTCCCCAAGGAACTTGAGAACTGAAAGATGGAAGACGAGCTCAACGGCGTCGTTCCATGTTCTTCCCTCGCCGTCGAATCCACCATTCGCGTCGGAACGGTGAACTTCACGAACAATTTCTTGAACTATGATTCGTTTTCTGTAACTTCTCCATCTGAATCTCTTTCCCCTGCTCATGTTCAGGCCGGCGCTCTATGGGGCTTGTGTATGGGTCCGTACAATTCTCGTAAAAATGGCCTCAGTGGCGTCGACCATGCTGCTTTCGTGGTATCATATACTTGCTATTTTGTTTTGATTTCCGATTATTTGGATGAGATGGTAGCATTGTGGCGTTTGTCCGATTTGAAAGTGTCTTTGTGGTCTATTTTTCAGGCGAAGTCTGTTGGAAAGAACGGCTTTCAATGTGTTGTTGCATATCTTATATTCAACACCTATTGCTTGGCTTACAAGTATTGGGATATGAGATATGCAGCATCTTTTTGGGCATGTATGTTTGCTAAACAGCTAAACAGATCGATTGCGGGTGCGGTCGCAGGAGCTGCAATTGCTACAAGGACTAGAAGAAGTTGGTCGCAGGTTGTTGGGATGGCTGCCCTTGTGTCTGCCTTCAGTGCTGCAGCTGAATATTCAAGATCACTTTAGAATACCTCTTGTGGGAAGAACAAAACCATGAGGTATTCACCATTCAATCCATTTCCATTACTTGTGAATGACATGCTGCATGCCCAAAATTCAGCAAATGTTGGTCCTGTATCGGTTGAAGGAGGGAGGGACCGGAACCTCGTTATGTCGTTTCCACTCAATTCTTCACAATTGCAGCTAACTTCTGGTGAGTTAAAAGCTGTAAATGATGGAAAAGCCGTGTACCAGCTTTCTAGTGGCCTACAATGACTGCTCTACTAAAGATGATGTTTACTAAAGATGAAAAACTATCGTATAGTATATTATAGTCAAATATCTTGTATGATTGAGGATATTTTACCTTCCATTACGGTTTACTGTAGGCATCATATTTGATAGACAAATATCTTGTATGATATTTAGCCTTCCATTACGATTTACCGTAAGTTTAATATTTATAAAAAGGCAGATAGAGGAACCAAATTGCAACCATATGTAAACCTCGAAAGTAAGTTGCGTAAGAAAATTCAAATTCCCAAATGCAACCTAACTCGATAGAATGTGAGTTTTTTCAAATAAATCAATTTAGACATTACCTAAATAACATTACTTTCCTTTTCTTACTAAAATACCAAC

Coding sequence (CDS)

ATGGAAGACGAGCTCAACGGCGTCGTTCCATGTTCTTCCCTCGCCGTCGAATCCACCATTCGCGTCGGAACGGTGAACTTCACGAACAATTTCTTGAACTATGATTCGTTTTCTGTAACTTCTCCATCTGAATCTCTTTCCCCTGCTCATGTTCAGGCCGGCGCTCTATGGGGCTTGTGTATGGGTCCGTACAATTCTCGTAAAAATGGCCTCAGTGGCGTCGACCATGCTGCTTTCGTGGTATCATATACTTGCTATTTTGTTTTGATTTCCGATTATTTGGATGAGATGGTAGCATTGTGGCGTTTGTCCGATTTGAAAGTGTCTTTGTGGTCTATTTTTCAGGCGAAGTCTGTTGGAAAGAACGGCTTTCAATGTGTTGTTGCATATCTTATATTCAACACCTATTGCTTGGCTTACAAGTATTGGGATATGAGATATGCAGCATCTTTTTGGGCATGTATGTTTGCTAAACAGCTAAACAGATCGATTGCGGGTGCGGTCGCAGGAGCTGCAATTGCTACAAGGACTAGAAGAAGTTGGTCGCAGGTTGTTGGGATGGCTGCCCTTGTGTCTGCCTTCAGTGCTGCAGCTGAATATTCAAGATCACTTTAG

Protein sequence

MEDELNGVVPCSSLAVESTIRVGTVNFTNNFLNYDSFSVTSPSESLSPAHVQAGALWGLCMGPYNSRKNGLSGVDHAAFVVSYTCYFVLISDYLDEMVALWRLSDLKVSLWSIFQAKSVGKNGFQCVVAYLIFNTYCLAYKYWDMRYAASFWACMFAKQLNRSIAGAVAGAAIATRTRRSWSQVVGMAALVSAFSAAAEYSRSL

Homology

[Close]

BLAST of Cp4.1LG12g05800 vs. Swiss-Prot
Match: OP164_ARATH (Outer envelope pore protein 16-4, chloroplastic OS=Arabidopsis thaliana GN=OEP164 PE=2 SV=1)

HSP 1 Score: 56.6 bits (135), Expect = 3.7e-07
Identity = 34/80 (42.50%), Postives = 40/80 (50.00%), Query Frame = 1


Query: 1  MEDELNGVVPCSSLAVESTIRVGTVNFTNNFLNYDSFSVTSPSESLSPAHVQAGALWGLC 60
          ME+EL   VPCSSL VES +RV T                            AG L+GLC
Sbjct: 1  MEEELLSAVPCSSLTVESVLRVAT----------------------------AGGLYGLC 52

Query: 61 MGPYNSRKNGLSGVDHAAFV 81
           GP ++RK GLSGV  A+FV
Sbjct: 61 AGPRDARKIGLSGVSQASFV 52

[Close]

BLAST of Cp4.1LG12g05800 vs. TrEMBL
Match: A0A0A0K992_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_7G397550 PE=4 SV=1)

HSP 1 Score: 89.0 bits (219), Expect = 7.4e-15
Identity = 48/80 (60.00%), Postives = 51/80 (63.75%), Query Frame = 1


Query: 1  MEDELNGVVPCSSLAVESTIRVGTVNFTNNFLNYDSFSVTSPSESLSPAHVQAGALWGLC 60
          MEDELNGVVPCSSLAVES+IRVGT                            AGALWGLC
Sbjct: 1  MEDELNGVVPCSSLAVESSIRVGT----------------------------AGALWGLC 52

Query: 61 MGPYNSRKNGLSGVDHAAFV 81
          +GPYNSRKNGL+GV HAAFV
Sbjct: 61 LGPYNSRKNGLTGVAHAAFV 52

[Close]

BLAST of Cp4.1LG12g05800 vs. TrEMBL
Match: D7U298_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VIT_07s0005g00520 PE=4 SV=1)

HSP 1 Score: 78.6 bits (192), Expect = 1.0e-11
Identity = 74/205 (36.10%), Postives = 91/205 (44.39%), Query Frame = 1


Query: 1   MEDELNGVVPCSSLAVESTIRVGTVNFTNNFLNYDSFSVTSPSESLSPAHVQAGALWGLC 60
           ME +  G VPCSSLAV+S +RVGT                            AGA+WGLC
Sbjct: 1   MEGDFEGFVPCSSLAVDSILRVGT----------------------------AGAIWGLC 60

Query: 61  MGPYNSRKNGLSGVDHAAFVVSYTCYFVLISDYLDEMVALWRLSDLKVSLWSIFQAKSVG 120
           M                             S Y      L  LS       + F AKSVG
Sbjct: 61  M-----------------------------SPYDASKKGLTGLSR------TAFVAKSVG 120

Query: 121 KNGFQC-VVAYLIFNTYCLAYKYWDMRYAASFWACMFAKQLNRSIAGAVAGAAIATRTRR 180
           K  FQC +VA +   T C+  ++       + W       +N  IAGAVAGA +A RTR 
Sbjct: 121 KISFQCGLVAGVFSGTRCVVQRH----RRQNDW-------VNGFIAGAVAGATVAARTR- 130

Query: 181 SWSQVVGMAALVSAFSAAAEYSRSL 205
           SW QVVGMA LVSA SAAA+Y +++
Sbjct: 181 SWKQVVGMAGLVSACSAAADYYKAI 130

[Close]

BLAST of Cp4.1LG12g05800 vs. TrEMBL
Match: I3T2W3_LOTJA (Uncharacterized protein OS=Lotus japonicus PE=2 SV=1)

HSP 1 Score: 68.9 bits (167), Expect = 7.9e-09
Identity = 35/82 (42.68%), Postives = 46/82 (56.10%), Query Frame = 1


Query: 1  MEDELNGVVPCSSLAVESTIRVGTVNFTNNFLNYDSFSVTSPSESLSPAHVQAGALWGLC 60
          ME++LN VVPCSSLAVES++RVGT                            AGA+WGLC
Sbjct: 1  MEEDLNNVVPCSSLAVESSLRVGT----------------------------AGAIWGLC 54

Query: 61 MGPYNSRKNGLSGVDHAAFVVS 83
           GPY +R+ GL+G+   +FV +
Sbjct: 61 YGPYEARQQGLTGIPRVSFVAN 54

[Close]

BLAST of Cp4.1LG12g05800 vs. TrEMBL
Match: A0A059AXT2_EUCGR (Uncharacterized protein OS=Eucalyptus grandis GN=EUGRSUZ_H01109 PE=4 SV=1)

HSP 1 Score: 68.6 bits (166), Expect = 1.0e-08
Identity = 36/80 (45.00%), Postives = 47/80 (58.75%), Query Frame = 1


Query: 1  MEDELNGVVPCSSLAVESTIRVGTVNFTNNFLNYDSFSVTSPSESLSPAHVQAGALWGLC 60
          M+DEL+  VPCSSLAV+S +RVGT                            AGA+WGLC
Sbjct: 1  MKDELSDAVPCSSLAVDSILRVGT----------------------------AGAIWGLC 52

Query: 61 MGPYNSRKNGLSGVDHAAFV 81
          +GPY++RK+GLSG+  A+FV
Sbjct: 61 IGPYDARKSGLSGMPRASFV 52

[Close]

BLAST of Cp4.1LG12g05800 vs. TrEMBL
Match: A0A061DQU3_THECC (Mitochondrial import inner membrane translocase subunit Tim17/Tim22/Tim23 family protein OS=Theobroma cacao GN=TCM_004660 PE=4 SV=1)

HSP 1 Score: 68.6 bits (166), Expect = 1.0e-08
Identity = 37/80 (46.25%), Postives = 44/80 (55.00%), Query Frame = 1


Query: 1  MEDELNGVVPCSSLAVESTIRVGTVNFTNNFLNYDSFSVTSPSESLSPAHVQAGALWGLC 60
          ME+EL+GVVPCSSLAVES IRVGT                            AGALWG C
Sbjct: 1  MEEELSGVVPCSSLAVESVIRVGT----------------------------AGALWGFC 52

Query: 61 MGPYNSRKNGLSGVDHAAFV 81
            PY+ RK GL+G+  A++V
Sbjct: 61 SAPYDGRKKGLTGIAQASYV 52

[Close]

BLAST of Cp4.1LG12g05800 vs. TAIR10
Match: AT3G62880.1 (AT3G62880.1 Mitochondrial import inner membrane translocase subunit Tim17/Tim22/Tim23 family protein)

HSP 1 Score: 56.6 bits (135), Expect = 2.1e-08
Identity = 34/80 (42.50%), Postives = 40/80 (50.00%), Query Frame = 1


Query: 1  MEDELNGVVPCSSLAVESTIRVGTVNFTNNFLNYDSFSVTSPSESLSPAHVQAGALWGLC 60
          ME+EL   VPCSSL VES +RV T                            AG L+GLC
Sbjct: 1  MEEELLSAVPCSSLTVESVLRVAT----------------------------AGGLYGLC 52

Query: 61 MGPYNSRKNGLSGVDHAAFV 81
           GP ++RK GLSGV  A+FV
Sbjct: 61 AGPRDARKIGLSGVSQASFV 52

[Close]

BLAST of Cp4.1LG12g05800 vs. NCBI nr
Match: gi|659101357|ref|XP_008451566.1| (PREDICTED: outer envelope pore protein 16-4, chloroplastic [Cucumis melo])

HSP 1 Score: 90.9 bits (224), Expect = 2.8e-15
Identity = 49/80 (61.25%), Postives = 51/80 (63.75%), Query Frame = 1


Query: 1  MEDELNGVVPCSSLAVESTIRVGTVNFTNNFLNYDSFSVTSPSESLSPAHVQAGALWGLC 60
          MEDELNGVVPCSSLAVES+IRVGT                            AGALWGLC
Sbjct: 1  MEDELNGVVPCSSLAVESSIRVGT----------------------------AGALWGLC 52

Query: 61 MGPYNSRKNGLSGVDHAAFV 81
          +GPYNSRKNGLSGV HAAFV
Sbjct: 61 LGPYNSRKNGLSGVSHAAFV 52

[Close]

BLAST of Cp4.1LG12g05800 vs. NCBI nr
Match: gi|449436491|ref|XP_004136026.1| (PREDICTED: outer envelope pore protein 16-4, chloroplastic [Cucumis sativus])

HSP 1 Score: 89.0 bits (219), Expect = 1.1e-14
Identity = 48/80 (60.00%), Postives = 51/80 (63.75%), Query Frame = 1


Query: 1  MEDELNGVVPCSSLAVESTIRVGTVNFTNNFLNYDSFSVTSPSESLSPAHVQAGALWGLC 60
          MEDELNGVVPCSSLAVES+IRVGT                            AGALWGLC
Sbjct: 1  MEDELNGVVPCSSLAVESSIRVGT----------------------------AGALWGLC 52

Query: 61 MGPYNSRKNGLSGVDHAAFV 81
          +GPYNSRKNGL+GV HAAFV
Sbjct: 61 LGPYNSRKNGLTGVAHAAFV 52

[Close]

BLAST of Cp4.1LG12g05800 vs. NCBI nr
Match: gi|731395490|ref|XP_010652190.1| (PREDICTED: outer envelope pore protein 16-4, chloroplastic isoform X1 [Vitis vinifera])

HSP 1 Score: 78.6 bits (192), Expect = 1.4e-11
Identity = 74/205 (36.10%), Postives = 91/205 (44.39%), Query Frame = 1


Query: 1   MEDELNGVVPCSSLAVESTIRVGTVNFTNNFLNYDSFSVTSPSESLSPAHVQAGALWGLC 60
           ME +  G VPCSSLAV+S +RVGT                            AGA+WGLC
Sbjct: 1   MEGDFEGFVPCSSLAVDSILRVGT----------------------------AGAIWGLC 60

Query: 61  MGPYNSRKNGLSGVDHAAFVVSYTCYFVLISDYLDEMVALWRLSDLKVSLWSIFQAKSVG 120
           M                             S Y      L  LS       + F AKSVG
Sbjct: 61  M-----------------------------SPYDASKKGLTGLSR------TAFVAKSVG 120

Query: 121 KNGFQC-VVAYLIFNTYCLAYKYWDMRYAASFWACMFAKQLNRSIAGAVAGAAIATRTRR 180
           K  FQC +VA +   T C+  ++       + W       +N  IAGAVAGA +A RTR 
Sbjct: 121 KISFQCGLVAGVFSGTRCVVQRH----RRQNDW-------VNGFIAGAVAGATVAARTR- 130

Query: 181 SWSQVVGMAALVSAFSAAAEYSRSL 205
           SW QVVGMA LVSA SAAA+Y +++
Sbjct: 181 SWKQVVGMAGLVSACSAAADYYKAI 130

[Close]

BLAST of Cp4.1LG12g05800 vs. NCBI nr
Match: gi|502117806|ref|XP_004495955.1| (PREDICTED: outer envelope pore protein 16-4, chloroplastic [Cicer arietinum])

HSP 1 Score: 69.7 bits (169), Expect = 6.7e-09
Identity = 36/82 (43.90%), Postives = 47/82 (57.32%), Query Frame = 1


Query: 1  MEDELNGVVPCSSLAVESTIRVGTVNFTNNFLNYDSFSVTSPSESLSPAHVQAGALWGLC 60
          MEDEL+ VVPC+SLAVEST+RVGT                            AGA+WGLC
Sbjct: 1  MEDELDDVVPCTSLAVESTLRVGT----------------------------AGAIWGLC 54

Query: 61 MGPYNSRKNGLSGVDHAAFVVS 83
           GPY++ + GL+G+  A+FV +
Sbjct: 61 TGPYDAHRQGLTGIARASFVAN 54

[Close]

BLAST of Cp4.1LG12g05800 vs. NCBI nr
Match: gi|388517587|gb|AFK46855.1| (unknown [Lotus japonicus])

HSP 1 Score: 68.9 bits (167), Expect = 1.1e-08
Identity = 35/82 (42.68%), Postives = 46/82 (56.10%), Query Frame = 1


Query: 1  MEDELNGVVPCSSLAVESTIRVGTVNFTNNFLNYDSFSVTSPSESLSPAHVQAGALWGLC 60
          ME++LN VVPCSSLAVES++RVGT                            AGA+WGLC
Sbjct: 1  MEEDLNNVVPCSSLAVESSLRVGT----------------------------AGAIWGLC 54

Query: 61 MGPYNSRKNGLSGVDHAAFVVS 83
           GPY +R+ GL+G+   +FV +
Sbjct: 61 YGPYEARQQGLTGIPRVSFVAN 54

The following BLAST results are available for this feature:

BLAST of Cp4.1LG12g05800 vs. Swiss-Prot


Match Name	E-value	Identity	Description
OP164_ARATH	3.7e-07	42.50	Outer envelope pore protein 16-4, chloroplastic OS=Arabidopsis thaliana GN=OEP16...	[more]

BLAST of Cp4.1LG12g05800 vs. TrEMBL


Match Name	E-value	Identity	Description
A0A0A0K992_CUCSA	7.4e-15	60.00	Uncharacterized protein OS=Cucumis sativus GN=Csa_7G397550 PE=4 SV=1	[more]
D7U298_VITVI	1.0e-11	36.10	Putative uncharacterized protein OS=Vitis vinifera GN=VIT_07s0005g00520 PE=4 SV=...	[more]
I3T2W3_LOTJA	7.9e-09	42.68	Uncharacterized protein OS=Lotus japonicus PE=2 SV=1	[more]
A0A059AXT2_EUCGR	1.0e-08	45.00	Uncharacterized protein OS=Eucalyptus grandis GN=EUGRSUZ_H01109 PE=4 SV=1	[more]
A0A061DQU3_THECC	1.0e-08	46.25	Mitochondrial import inner membrane translocase subunit Tim17/Tim22/Tim23 family...	[more]

BLAST of Cp4.1LG12g05800 vs. TAIR10


Match Name	E-value	Identity	Description
AT3G62880.1	2.1e-08	42.50	Mitochondrial import inner membrane translocase subunit Tim17/Tim22/...	[more]

BLAST of Cp4.1LG12g05800 vs. NCBI nr


Match Name	E-value	Identity	Description
gi\|659101357\|ref\|XP_008451566.1\|	2.8e-15	61.25	PREDICTED: outer envelope pore protein 16-4, chloroplastic [Cucumis melo]	[more]
gi\|449436491\|ref\|XP_004136026.1\|	1.1e-14	60.00	PREDICTED: outer envelope pore protein 16-4, chloroplastic [Cucumis sativus]	[more]
gi\|731395490\|ref\|XP_010652190.1\|	1.4e-11	36.10	PREDICTED: outer envelope pore protein 16-4, chloroplastic isoform X1 [Vitis vin...	[more]
gi\|502117806\|ref\|XP_004495955.1\|	6.7e-09	43.90	PREDICTED: outer envelope pore protein 16-4, chloroplastic [Cicer arietinum]	[more]
gi\|388517587\|gb\|AFK46855.1\|	1.1e-08	42.68	unknown [Lotus japonicus]	[more]

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **INTERPRO**
Term	Definition

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0008150	biological_process
cellular_component	GO:0005575	cellular_component
cellular_component	GO:0016021	integral component of membrane
cellular_component	GO:0016020	membrane
molecular_function	GO:0003674	molecular_function
molecular_function	GO:0042803	protein homodimerization activity

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Cp4.1LG12g05800.1	Cp4.1LG12g05800.1	mRNA

InterPro

Analysis Name: InterPro Annotations of Cucurbita pepo
Date Performed: 2017-12-02


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	PANTHER	PTHR14110	MITOCHONDRIAL IMPORT INNER MEMBRANE TRANSLOCASE SUBUNIT TIM22	coord: 104..200 score: 9.4E-19coord: 53..70 score: 9.4E-19coord: 1..24 score: 9.4
None	No IPR available	PANTHER	PTHR14110:SF5	OUTER ENVELOPE PORE PROTEIN 16-4, CHLOROPLASTIC	coord: 1..24 score: 9.4E-19coord: 53..70 score: 9.4E-19coord: 104..200 score: 9.4

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
Cp4.1LG12g05800	CmaCh08G004240	Cucurbita maxima (Rimu)	cmacpeB902
Cp4.1LG12g05800	CmoCh17G010610	Cucurbita moschata (Rifu)	cmocpeB335
Cp4.1LG12g05800	CmoCh08G004180	Cucurbita moschata (Rifu)	cmocpeB839
Cp4.1LG12g05800	Cla015070	Watermelon (97103) v1	cpewmB131
Cp4.1LG12g05800	Lsi02G024060	Bottle gourd (USVL1VR-Ls)	cpelsiB113
Cp4.1LG12g05800	CsaV3_7G029280	Cucumber (Chinese Long) v3	cpecucB0188
Cp4.1LG12g05800	Bhi09G000718	Wax gourd	cpewgoB0210
Cp4.1LG12g05800	CsGy7G015930	Cucumber (Gy14) v2	cgybcpeB906

The following gene(s) are paralogous to this gene:


Gene	Paralogue	Organism	Block
Cp4.1LG12g05800	Cp4.1LG17g07140	Cucurbita pepo (Zucchini)	cpecpeB157

The following block(s) are covering this gene:


Gene	Organism	Block
Cp4.1LG12g05800	Cucurbita pepo (Zucchini)	cpecpeB193
Cp4.1LG12g05800	Cucumber (Gy14) v1	cgycpeB0185
Cp4.1LG12g05800	Cucumber (Gy14) v1	cgycpeB0579
Cp4.1LG12g05800	Cucumber (Gy14) v1	cgycpeB0669
Cp4.1LG12g05800	Cucurbita maxima (Rimu)	cmacpeB260
Cp4.1LG12g05800	Cucurbita maxima (Rimu)	cmacpeB371
Cp4.1LG12g05800	Cucurbita moschata (Rifu)	cmocpeB224
Cp4.1LG12g05800	Wild cucumber (PI 183967)	cpecpiB140
Cp4.1LG12g05800	Wild cucumber (PI 183967)	cpecpiB141
Cp4.1LG12g05800	Wild cucumber (PI 183967)	cpecpiB163
Cp4.1LG12g05800	Cucumber (Chinese Long) v2	cpecuB139
Cp4.1LG12g05800	Cucumber (Chinese Long) v2	cpecuB161
Cp4.1LG12g05800	Bottle gourd (USVL1VR-Ls)	cpelsiB116
Cp4.1LG12g05800	Watermelon (Charleston Gray)	cpewcgB126
Cp4.1LG12g05800	Watermelon (Charleston Gray)	cpewcgB134
Cp4.1LG12g05800	Watermelon (97103) v1	cpewmB141
Cp4.1LG12g05800	Watermelon (97103) v1	cpewmB153
Cp4.1LG12g05800	Melon (DHL92) v3.5.1	cpemeB118
Cp4.1LG12g05800	Melon (DHL92) v3.5.1	cpemeB144
Cp4.1LG12g05800	Melon (DHL92) v3.5.1	cpemeB146
Cp4.1LG12g05800	Cucumber (Gy14) v2	cgybcpeB309
Cp4.1LG12g05800	Melon (DHL92) v3.6.1	cpemedB145
Cp4.1LG12g05800	Melon (DHL92) v3.6.1	cpemedB172
Cp4.1LG12g05800	Silver-seed gourd	carcpeB0158
Cp4.1LG12g05800	Silver-seed gourd	carcpeB0801
Cp4.1LG12g05800	Silver-seed gourd	carcpeB1143
Cp4.1LG12g05800	Cucumber (Chinese Long) v3	cpecucB0162
Cp4.1LG12g05800	Wax gourd	cpewgoB0171
Cp4.1LG12g05800	Wax gourd	cpewgoB0193