Cp4.1LG11g02470 (gene) Cucurbita pepo (Zucchini)
The following sequences are available for this feature:
Legend: five_prime_UTRCDS Hold the cursor over a type above to highlight its positions in the sequence below.CACGAAGCTGAATCTCAAAACTTAGGACTAAGCCGGTTGGCATCCCGACCGCGATCAGTCCAAGCCGGGTTCGCCACGTATGGAGGTTTTCGTCTTCTTGCCTACCGCACAACTCAGAGAGGAGAATTTTGAACCCTGCAATGGAAGGGAGAAAGGGGAAGAAGGGTTACATGTGGGCAATTTCAGCTGGTCTCAACGCTGCGTTCGCCGCCATTGCCGCCAAGCTTTTCTCCTCTACGGTAATCTTTCTCCATTTCTTTCCCGTACGAATCGTTTCACGATGATGCGATGATTTGCCCTAATTTGTATGAACCAACACAATCACGAGCTGCTTTTGTCAATTGTCTGAAGTTTTTCATCATTCTCGTTCTAATCATATTGCAATCGCATCTGCTCATATAATATCGACGTTGCAAATTGGCAGTCTACTGGATTTTGGTTAGTATTCATAGCTTTTGTTAGTGTAAATTAGCAATCTGATTATATGTGAGATTTCAAGTCAGTTGGACAGAGGAAGAAACATTTCTTACAAGGGTGTGAAAATCTCTTCCCAACAAACACGTTTTAAAATCGTGAGATTGATAGCGATATGTAATGGATCGAAGTGGATAATATCTGCTAGTGATGAGCTTGGACTGTTACAATTTGTGCGGCTGGGTAGTGTGCCAGCGAGAATGCTGGGCCAACAAGGGGTAGATTGTGAGATCATATATTGGTTACAATGGGGAACGAAACATTCCCGATAAGGGTGTGGAAACCTCTCCCTTGCAGACACGTTTTAGGAGACAATATATGCTAGCGGTAGACTTGGCTCTTACGGTATATCTCCCTAAACTTAGAATATGACTATAAGATCCATTGGAATTTGTTGGGTTTGGCGTATTGTGTTTAACCTCTTACAATGCGAAGAGAAGAGGATAGGTAGTTTAAGGAAGAAGGATTCAGTGGATGTGGGGTTGTGAGGTCCCACGTCGGTTGGAGAGGGGAACGAAACATTTCTTACAAAGGTGTGGAAACCTCTCTGGCAGATGCGTTTTAAAACTTTGAGGGGAAGTCCTTGAAGGGAAAGCCAAAAAAAGACAATATCTGCTAGCGGTGGGTTAGATCTATTACTGGAGTGGAGACTCTGTCAAACGAGTTATGGCACACCTATGATGGTAAAGATGAGGAGAAAGCCTTCTTCTGGAAGGACAAATTCATAGGTAGTTTACTCTTTGCAGCTTGGTTCCTACTGTTCTTGGTTCGAAGTCAGATAATTCATCAATCTTGGATCTCCTTGGGAGTGAGTTGTGTTGGATGATGATCCACCCTCTTTGGAGGGCTCAGCGTCCTCGCTGGCACACCGTCCGGTGTTTGACTCTAATACCATTTGTACTAGTTCAAGCCTACCGCTAGCAGATACTAATTGTTTTGGCTTGTTTCGTATCGTCGTCAGCCTCACGATTTTATAACGCGTCCGTCGGAGAAATGTTTCCACATCCTTACAAAGAATGCTTCATTCTTTTCTCCAACCGATATGAGATATCATAGATTTGTTTGAACTTTTCAATACATCAATGGGAAGTTCTTTTGTTTCGAAAAAAGCATAAATTAATATGCTTAGACTTTAAATTACATGCAAATATGTAGAGGAAGCTGCCATAAGTTGGAAACCGACATACCCAGTTTCCCTCTTACCTTGGTTTTGATGTTAGCATTTCTTTGTTGAACAGTTAATTAGGTATGGACTGGTAATTGCGTTCAACTTGGCAATGTGGGGATGTTATGTCAACAGCTTAAAAGCTCTCTCGTCATTACAAGCTACAGGGACCAACTTTTCAGCTAACTTTCTTTGTTCTGGTCTAGCCGGTTTCTTCTTGTTCGAAGAACCATTATCATTTCAGGTAAATCCTTCATCATATCCATAG CACGAAGCTGAATCTCAAAACTTAGGACTAAGCCGGTTGGCATCCCGACCGCGATCAGTCCAAGCCGGGTTCGCCACGTATGGAGGTTTTCGTCTTCTTGCCTACCGCACAACTCAGAGAGGAGAATTTTGAACCCTGCAATGGAAGGGAGAAAGGGGAAGAAGGGTTACATGTGGGCAATTTCAGCTGGTCTCAACGCTGCGTTCGCCGCCATTGCCGCCAAGCTTTTCTCCTCTACGTTAATTAGGTATGGACTGGTAATTGCGTTCAACTTGGCAATGTGGGGATGTTATGTCAACAGCTTAAAAGCTCTCTCGTCATTACAAGCTACAGGGACCAACTTTTCAGCTAACTTTCTTTGTTCTGGTCTAGCCGGTTTCTTCTTGTTCGAAGAACCATTATCATTTCAGGTAAATCCTTCATCATATCCATAG ATGGAAGGGAGAAAGGGGAAGAAGGGTTACATGTGGGCAATTTCAGCTGGTCTCAACGCTGCGTTCGCCGCCATTGCCGCCAAGCTTTTCTCCTCTACGTTAATTAGGTATGGACTGGTAATTGCGTTCAACTTGGCAATGTGGGGATGTTATGTCAACAGCTTAAAAGCTCTCTCGTCATTACAAGCTACAGGGACCAACTTTTCAGCTAACTTTCTTTGTTCTGGTCTAGCCGGTTTCTTCTTGTTCGAAGAACCATTATCATTTCAGGTAAATCCTTCATCATATCCATAG MEGRKGKKGYMWAISAGLNAAFAAIAAKLFSSTLIRYGLVIAFNLAMWGCYVNSLKALSSLQATGTNFSANFLCSGLAGFFLFEEPLSFQVNPSSYP
BLAST of Cp4.1LG11g02470 vs. TrEMBL
Match: A0A0A0LPF1_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_2G365690 PE=4 SV=1) HSP 1 Score: 154.1 bits (388), Expect = 8.9e-35 Identity = 79/86 (91.86%), Postives = 82/86 (95.35%), Query Frame = 1
BLAST of Cp4.1LG11g02470 vs. TrEMBL
Match: U5GGV2_POPTR (Uncharacterized protein OS=Populus trichocarpa GN=POPTR_0005s25710g PE=4 SV=1) HSP 1 Score: 137.5 bits (345), Expect = 8.6e-30 Identity = 71/92 (77.17%), Postives = 80/92 (86.96%), Query Frame = 1
BLAST of Cp4.1LG11g02470 vs. TrEMBL
Match: E0CPJ4_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VIT_18s0001g13700 PE=4 SV=1) HSP 1 Score: 136.7 bits (343), Expect = 1.5e-29 Identity = 71/90 (78.89%), Postives = 79/90 (87.78%), Query Frame = 1
BLAST of Cp4.1LG11g02470 vs. TrEMBL
Match: A0A061FD07_THECC (Cell growth defect factor-2 isoform 3 (Fragment) OS=Theobroma cacao GN=TCM_034169 PE=4 SV=1) HSP 1 Score: 135.6 bits (340), Expect = 3.3e-29 Identity = 70/91 (76.92%), Postives = 78/91 (85.71%), Query Frame = 1
BLAST of Cp4.1LG11g02470 vs. TrEMBL
Match: M5XS37_PRUPE (Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa026034mg PE=4 SV=1) HSP 1 Score: 135.6 bits (340), Expect = 3.3e-29 Identity = 69/90 (76.67%), Postives = 77/90 (85.56%), Query Frame = 1
BLAST of Cp4.1LG11g02470 vs. TAIR10
Match: AT1G30845.1 (AT1G30845.1 unknown protein) HSP 1 Score: 115.2 bits (287), Expect = 2.3e-26 Identity = 57/84 (67.86%), Postives = 72/84 (85.71%), Query Frame = 1
BLAST of Cp4.1LG11g02470 vs. NCBI nr
Match: gi|449469907|ref|XP_004152660.1| (PREDICTED: uncharacterized protein LOC101208185 [Cucumis sativus]) HSP 1 Score: 154.1 bits (388), Expect = 1.3e-34 Identity = 79/86 (91.86%), Postives = 82/86 (95.35%), Query Frame = 1
BLAST of Cp4.1LG11g02470 vs. NCBI nr
Match: gi|659088061|ref|XP_008444781.1| (PREDICTED: uncharacterized protein LOC103488027 [Cucumis melo]) HSP 1 Score: 152.5 bits (384), Expect = 3.7e-34 Identity = 77/86 (89.53%), Postives = 80/86 (93.02%), Query Frame = 1
BLAST of Cp4.1LG11g02470 vs. NCBI nr
Match: gi|731429792|ref|XP_010664769.1| (PREDICTED: uncharacterized protein LOC100259103 isoform X2 [Vitis vinifera]) HSP 1 Score: 138.3 bits (347), Expect = 7.3e-30 Identity = 72/91 (79.12%), Postives = 80/91 (87.91%), Query Frame = 1
BLAST of Cp4.1LG11g02470 vs. NCBI nr
Match: gi|566173243|ref|XP_006383734.1| (hypothetical protein POPTR_0005s25710g [Populus trichocarpa]) HSP 1 Score: 137.5 bits (345), Expect = 1.2e-29 Identity = 71/92 (77.17%), Postives = 80/92 (86.96%), Query Frame = 1
BLAST of Cp4.1LG11g02470 vs. NCBI nr
Match: gi|359492195|ref|XP_003634377.1| (PREDICTED: uncharacterized protein LOC100259103 isoform X1 [Vitis vinifera]) HSP 1 Score: 136.7 bits (343), Expect = 2.1e-29 Identity = 71/90 (78.89%), Postives = 79/90 (87.78%), Query Frame = 1
The following BLAST results are available for this feature:
The following terms have been associated with this gene:
GO Assignments
This gene is annotated with the following GO terms.
The following mRNA feature(s) are a part of this gene:
Analysis Name: InterPro Annotations of Cucurbita pepo
Date Performed: 2017-12-02
The following gene(s) are orthologous to this gene:
The following gene(s) are paralogous to this gene: None The following block(s) are covering this gene: |