Cp4.1LG06g02710 (gene) Cucurbita pepo (Zucchini) | Cucurbit Genomics Database (CuGenDB)

Overview


Name	Cp4.1LG06g02710
Type	gene
Organism	Cucurbita pepo (Cucurbita pepo (Zucchini))
Description	Eukaryotic initiation factor 4F subunit p150 isoform 2
Location	Cp4.1LG06 : 1471126 .. 1481965 (-)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

GCTTAAAATTATCCAACAAAATGAACAGACGCAAATATACTCTCTAAGAGAGGAATATTGATGATCGTTTTCCCTTTTTCACTGGATTTTCAGAGCGAACTTTTGTATATTAGTCTCGAAAACTTCATCTGCTTCGATGAAGATGATGGTCTCGAATGGATATGCCGGCAGAGGAAGCAGTGGTTATGGATACGATGGTAGAAATTCGTTTAGAAACAAGATTTACAAGCGATTGGAACCTTGTTTGGTGATACCGCCGATGAGAGGTAAGCTGCTTGGCGCTATCATTAAGTTCCTCGATGGCGCTATCATCGGAGCTATTCCTGAAGTCACTTGCAGGTTTTTTTCTCTTCCGTTTCTTCGCTATCATTTGTATTTCGATGTAGCTACTTTATTTGAGCTTTTGGCAAAGGAAGGGTTTCTGATAATTTCAGTACCTTATAATTTGACTTTCGATCATGACATTGCTGCGAGACAAGTATTCGAGAGGTTTTGATGGCTGTTTGGATGCCATTTTAGCGTCCGGATTGCTCGATGAAGATGTTTCACATGCTCAACTTGTTAACCTTTCTCTACCGTGGATCATAGGTGAGTCAACTCGTGATTGTTGTCTTCATTTCCATAGGATGAAATGCTGAGGTAATTTCATTTTGTTGTTTATTGGTAGCAATGGCGCGCTTCTGCAAGTACTCACAGGGAGCTATTTCGCCGCGAAGATACCTAAGGTTTGGATTCTTACTTTTCTTCTGGTTGTTTTAGTCTTTTAGTTTACTTGTGGAAATGAATTGGACGCAACTGACTAGCTAATCACCGAGATGATAATTTTCTTATCAATTTCAATGGTTGTGTGACATAATAAATATTCTCGTTGTGGAAGGATAATGCTATTATCTCCTTCAACAACAGGCCAGCAACAGAGGCTGTTCCTTACTTTGAGCAGGTAAGGCTGGCATAGATCACTGTTCATATTTTGATGGATTTCATGGTTAGTTTGCGTGGGCTTGTGCATGCTCAAAAGAATCAACTCCTTTTCACTTCTAAGAGCGATCGCTTATGGAAAAGATATCAATTCCAATATCTGAGACAATTTGCATTTTACCTCTGGAGATGTTTGATTGGATTGTACAAAAGGTGAGAACTGTTAGAATTGGTCAATCCATTAGAATAGCTTGAAGTTAGTCATGCCATAAGAATAGGCTTACTTCGTTAGTTTCCTATGAAATCGGATCTATTAGTTAATCTTTTGCCAATATAAATAGAATATGTCCTCAATAGTGTGAGGGACAGTTTTGCATAAACTTGATATGGTATCAGAGCAGAAATAAGATCCACGAGATCCATAGCCTCTGCTGTTAGACATGTCAATCCCAATCAACACAATGTCTTCTCCGTCGATCAGTCAGGTGATTAGTGTTAAGCTTACACAAGAAAATTATCTACTGTGGTCTACCCAAATCCTTCCCTACTTGCGTAGCCAAAACCTTGTTGGTTTTGTGGATGGATCCATGCCTGCACCAAGCCAGACGATCGCCGTTGAACCAAGTGAAGAAACAGGGAATCGCAAAATTATCATCAACCCTGAGTTCACAGTCTGGTACCCCCAGGACCAGCTGGTACTCAGCCTCATCAACTCATCAGTCACTGAGGAGGTTCTCAGCACGATGGTTGGAATCACCACTGCACGAGAAGCCTGGATTACGCTGGAGCGACAATTTGCTTCCACATCTCGAGCAAGAGCAATGCAGATCCGTATGGAACTCTCTACTATCCAGAAAAAGGACATGACAATTGCTGACTACTTTCGTAAAGTAAAACATCTTGGTGATACACTTGCTGCCATTGGCAAGCGAATAGAGGATGAAGAACTCATCGCCTACATGCTGCAAGGACTTGGTCCAGATTATGATCCTCTAGTCACAAGCATTACAACCAGAACAGATGTATACACTGTCAGCGACGTGTATGCTCACATGCTGAGCTATGAGATGCGGCACTTGCGTAAGGGTACATTTGAGCAACTTTCATCTGCTAACAATGTCAATAGGATATCCATTCGTGGAGGTGCCAATGGAGGTCGAGGTAGTCGCGGTCGTAGTCGTCAGTTAAATAGTGGTCATGGACAATCAAGGCGTACTGTGAACAATCCTGGACGTCAACCATCAAAGACACAAAGCAGCTCAGGCATTGTCTGTCAGATTTGTGGTAAGCCCAATCACGATGCTTTGCAATGCTGGCACAGATTTGATCAGGCATATCAAGCCGAAAATAATCTCAAACAAGCAGCTTTGGCAACAAGTGGATACACTAGTGACACAAACTGGTATGTTGACACTGGAGCCACAGATCATATCACCAATGACCTAGAGAGGCTTACCACCAGAGAACGCTACACTGGCACCGACCAAATTCAGGTTGCAAATGGCGCAGGTTTGTCTATCTCTCATATTGGGAATTCATTAATTTCTGGTTCATCTCTTGTTCTGAAACATATCCTATATGTTCCTAAAATCAATAAGCACCTAATTTCAGTACAAAGACTAGCATCTGATAATAATGCTGTTGTAGAATTTCACCCAAACTATTTTTTGGTTAAGGACCGAGTCACGAAGAAACTCCTGCTCCACGGTAGATGTAAGAATGGCCTATACGTTCTACCGCATAATTTCAGTCAAGCCTTGCTGACAGCCAAACTTTCGAAAGAACAATGGCACAGAAGGCTAGGGCACCCTGCATCTCCAATTACCATTAGAATTCTACAAGATAATAATTTAGCTATAGATACTAATATTCCCTCTTCCTCAATTTGTAATGCTTGTCAATTAGGGAAAGCACATCAATTGCCATTTGGTTCTTCTCAGCATGTATCTACAGCACCCCTTCAATTAATTCACACTGATGTATGGGGTCCATCCATTGCGTCAGTAAATAATTCCAAATATTATGTTTCCTTTGTTGATGATTTTAGTCGTTATGTTTGGATTTACTTTCTGAGATGCAAATCTGATGTTGAGTCTGTGTTCCTTCAATTTCAAAAACATGTTGAAACTATGCTAAATACCAAAATTCGCTCCGTCCAATCAGATTGGGGGGGTGAATACCATCGGTTACACAATTATTTCAAATCCACAGGCATTGAACATCATATCTCCTGTCCTCACACACACCAGCAGAATGGGTTAGTCGAAAGAAAACACAGACACATTGTAGAAACTGGCCTTGCTTTACTCGCTCAAGCCAACATGCCTCTATCCTACTGGGATGAAGCTTTCAACACAGCTTGCTTTCTTATAAATAGAATGCCCAGCCGAACCATACAACAAGACACACCACTTCATAAATTGTTTGGTAAAAGTCCAGACTACTCCATGCTTAGGGTGTTTGGCTGTGCTTGCTGGCCTAATTTAAGGCCTTACAACAACAAGAAACTGAGTTTCAGAACTACTAGATGTATATTCTTGGGTTATAGTTCTTCTCATAAGGGATATAAATGCTTAAATAGAAGTACAGGACGTATTTACATCTCTAGAGACGTGGTTTTCGATGAAAATATTTTTCCTTTTGAAGAATCTAAGCCACCAAACAAAACCACAAATCCACATCATCCTGTTCTACTTCCAGCCTTAGCCAAACTTGCTAGTTTTTACACTGAAAATGCTCTTACAGATATTGAACCAGTTGTTAGTAATTCCCATATGAATGATGGTCAAACTGATAATATTGCTAGTGACAACTTGTCTGGTGTCAGCTTATCTTCTGCAGATAATACAAGAAGTTCAGAGGAAATTGCAGAATATGAAGCTGAGAGCAGTTCGATCAATGCTCAAAACCAAACTCATGAACATGTGTCTGATCAACCAACTGAAGCAGCTAGTCAACATCCAATGCGAACAAGGTTGAGAAATAACATTGTACAAGCTAAACAATTCACTGATGGAACTATCAGATATTCAGAAACCTCAAGAAAATTCGCAAGCGCTGTAACTATCACAACTCCGATCATAGAGACTGCTACTGAACCTCGAAACCTGCAGGAAGCCATGCAACATCCAAGATGGAGAGGAGCAATGAATGATGAGCTCTCAGCGCTAAAACGAAATGCCACTTGGGATCTAGTTCCACCCAAACCTGGAATAAATCTCATTGATAGTAAATGGGTGTATAAAGTGAAAAGAAAAGCAGATGGGTCAGTTGAAAGATTAAAAGCAAGATTAGTTGCCAAAGGATTCAAGCAAAGATTTGGTGTTGATTACACTGATACTTTTAGCCCTGTGATCAAACCGTCAACAATCAGGGTCATTCTTTCGCTAGCAGTAACCAAGGGCTGGAATATGAGACAAGTTGATATCCAAAATGCATTTTTGCATGGAATTCTGAAAGAGGAAGTGTACATGCGACAACCACCAGGATTTCAAGACTCAGCCAAACCAAAGAATTACATATGCAAGCTCAAGAAAGCCCTTTATGGCCTGAAACAAGCCCCAAAAGCTTGGCATTCAAGGTTGACTGGAAAACTTATTGAGTTAGGCTTCAAGGCTTCAGTAGCTGATTCATCTCTTTTTATTCTCAAAAACAGAGAGATAACTATCTATATGCTCATCTATGTTGATGATATAATTATTGTGAGCTCCTCTGATCAAGCAACCGAAAGGTTGATTCAGAAATTGAAAATAGATTTTGCAGTAAAAGATTTGGGTGGTCTTGAGTATTTTCTGGGTATTGAAGTCAAGAAAACACGAGATGGTATCATACTGTCACAGAGACGATATGCCTTAGATTTGTTGAAAAGAGTAAACATGGAAAAATGCAAACCTATGTCTACACCAATGGGTTCTGCTGAAAAATTATTCAGAGAACAAGGAATACCCTTATCAGCTGAAGAACAATTCAAATACAGAAGTACAGTGGGAGCACTACAATATTTGACAATGACTAGGCCTGATTTGGCATTTGCTGTCAATAAAGTGTGTCAATATCTTCATACACCTACTGATGCTCATTGGGGTGCTGTGAAGAGAATTCTTCGTTATGTTAAAGGCACACTAGCATTAGGAGTGAAAATTCAGAAATCAACCATGATGTTGTCGGGGTTTTCTGATGCTGATTGGGCTGGTTGTCCCGATGATCGACGTTCAACTAGCGGCTTTGCTGTATTTCTTGGAGCAAATCTAATCTCATGGAGTTCCAGAAAACAGGCTACAGTGTCAAGATCAAGCACCGAAGCAGAATACAAGGCCATTGCGAATCTTACTGCAGAAATGATTTGGATCAAGTCATTACTGAAGGAACTGGGCGTGTATCAATCAAAGGCTCCTCGCCTCTGGTGTGACAACCTCGGAGCTACATATTTAACTTCAAATCCAGTATTTCATGCTAGAACGAAACATATTGAAGTTGATTTTCATTTTGTTCGAGAACAAGTAGCACGTAAAGCAATGGAAGTTCGGTTCATTTCATCAAGTGATCAAGTAGCTGATATCCTGACAAAACCACTGTCTAAAACTCCTTTTACTACACATTGTAACAATCTCAACATGTACAAGACTTGTTGGGATTGAAGGGGACTGTTAGAATTGGTCAATCCATTAGAATAGCTTGAAGTTAGTCATGCCATAAGAATAGGCTTACTTCGTTAGTTTCCTATGAAATCGGATCTATTAGTTAATCTTTTGCCAATATAAATAGAATATGTCCTCAATAGTGTGAGGGACAGTTTTGCATAAACTTGATAAGAACCTGGTGATTTTCATGATCTTTCTGAATGAACAGGTTTTGGAAATTGAAGTGAAGCATGATCTTGAATTTTCAGTTTGAGGGAAGGTGTTTAATCTTTAGGGGCGCTCGTTCTGAGTGGATCATTTATTTTTTTTGGATTCCATGAACCAAAGATAGGACGTAGCGATCATTCACTTCTAGATTTTGAATGATAGCAGTATAATAACCCCTAATTGAAGCTAACTCACTTTGTTCTTGATTTCTTTCATGTATTGGACATGGCATTGAGAATAGATAGACATCAAAGAAGACTTGCATAACACGAGCTACTGTATTCCATTTGAGAATATTGATTGAAATGCTGCTCTAATCATTTGAGAATATTGTTTGATGCCGATTCACATTCATCCTTGTCATTTTCATTCGATTCAAATACTACTTGCTACTTGTGCTATAATTTCTTTCTTGAATCATGCAAAAAATCGTATCCTTGATCTTTGATGCGTTCATGAGGAAACTTCCATTTATTATCCTTGTTTGTATGCAGGGGATGTGTGGAAGATCTTGCTTGATGCTGCTGGAGCTATTGTTTCAGACAGAGATCAATCGAGTAAGTCTTGAATTCTCTGACTAAAATTTGTTGATCAGCTGCCCTCAGTTTTAAACCAGGTAACCCTTTAAAATTTCACGTCTGCTTCTTTGCTTTGTCTCTTCCTTTTTAGAATTTTAGAATGGAAGCGGTTAGGAATCGGATCTCCACAATGGTATGATATTATGATACTGTGAGCATAAGTTCTAGTGGTTTTGCTTTGGCCTTCCCAGAAGGGCTCGTACCATTGGAGATAGTATTCATTACTTATAAATACATGATCATTTCCTAAATGAGCTAACGTGGGGTTCACTCCCAATAACATGGGTACTGTGTTGACCGAAGAAGAAGCCTGGTTGACTTGCTGCTCTTTTTTTTTTAATGTGATTGGGTTGGGTCGGGTTGACTCAGTCCTTTGCCCATTGAATTTGTACCCAATTTATAAACGGGCTCTCGTCTAAAAAATTCAACCCATTTCGAAATGCTATCTAGCCCAATCCAACCTTTATAATTCAAGTTGGGTTTTGGATTCTTGGTTGAATACACGCCCCTACTTGAGTGTATCAATACATCTTTTTAAAGTTTTTACATGAAATAGATCCATTAGATCTCATTTGATAATCATTTAATTTTTTAATTTTTTAATTTTTGAGTTAAGAATTGAGTTTTTAAAATCTATGAAAACCAAAATTTTGTTAATGAAAAATAAGTGTTTTTAAAATATATTTTTGTTGAAATTTGGTTAAGAATATATTGTAAAGAAATTGTCAAAATTTTAAAACTTTTTTAAAGACTAAAAAAAGAAAAAGGAAACCGAAACAACTTGAGAGAGGAGAAGGCGGGGAAGAATATGGGAGGGTCGCGGGTGAGATCAGAATCAGATGATCCAATCATTTGTTTCTTTTTCTTTTTCTCTCTCGTTAATTATCGTTTGATCGTTCTGCTATTTGCTTTCTTGGCGATTTCGTCAGTTCCATTACACCTGTTCCTGTGGCTGTGCGGCGCGGCTCCCATGGATTATTGGAAAACGTGGTTGCTCTTCTTCTCTGTCTCTGCCTTTTGCCTTACCCCAATCCGAAGAGCCTTGCGAGTCTATGACCTCCGCCATTGCGCCATGAAACACCACATACAAATGCAACAAAGGCACGTTTCCTTTTCCTTGCATCATTTCAATCTCTCTCTCTATTTCTTTTTTCCCTTTTTGTCGGCTCTTCTGATACATGTAGGAGTAAGATTTGTTCTGCGGTTCTTTCTTTTTTTTTTCTTTTGCCCTAAATTTTGTTTTCTTATGATTCGCATCATCGTTTTTAGTTCATTTTTATATGAATATCCTTTGTTCTAAATTTAGGATGGTTTCTGCTACTGTTGGAGTCGGTTCTGGGCTTTATTTTTTAGGCTGAAACTCTATTTTAGTGTTCATTTTAGTCAATGTAATGTAAAATTTTGCAAAGTTGAACCCAAATTCTATGCCCAATGAAAACAATAAGATAAATGGACCAAACTAGTCCCTTAAAAGTACAAAACCGAAGCTGAAACTATGATAAAAACAAAAGAGTATTTAAACTTTGGATAGACTTTTGGAATTTGGTGTCTACTTCCTCGACATTGCAGGAAATGGGATAAAAGTCTGTCTCGGATTTCAGTTCTAAAAAATTGTCTTAACCTTTTGAACTCACAAAATTGGGGTTATTTCAAACCTGTATGAAACTCCAATTGCCATTTCCAATCTGGAATGGACTTTTCAGATCTTCGAATTTAGTGGACTCATATCGGTCCTTTTCTATAGACAACCATTTTGACATCGAGAAATTTTCTTTTCATGTAAACTTGGACTAACTTAGCAAGTTATTGATAATTGATAAACCGCAAGAACCTACTTGCCATGTGGCTACTACTGTCTGGAAGAATAATATTTCCTTAATCACCCGACGTCAGAAACTTCTTACTGCTCACCCTGAATTTTTTACATATGGATCTGAGAGAAATTTTCTTTTCCTTTGGAAAATATAAATACTTATGAAGAATTTAGTGATTGTGACCGACATTAATTAGCCACTTAATTAAGTATGAATGAGTGGTGGTTCACAGAAACTAATTAGCCACTTATTAAGTATTGAGAACAGCAACAAAAACAGGATCAACAAATTATACCCCCACTTCATGTAACCGCCTAAACCCCCACTTCATGTAACCGCCTAAACCCGCTAAGAGATATTATTCTGTTTGGACTTTCCTTTTCAAGCTTCCCCTTAAGATTTTAAAACGCGTTTATTAGGGAGAGGTTTTGACATCCTTACTCTTAGAAGGAATGCTTTGTTCCACCTCTCCAATTGATGTGGGATCTCACACAATGCACCTGCTTAGAGGCCCAGCGTCCTGGTTCTGATTCCATTTTTAACTGTCCAAGCCCACCGCAAGTAGATATTGTCCACTTTAGCCCGTTACATATAACCATCAGCCTCACGGTTTAAAATCCATCTACCGTAAAGAAATTTCTACACCTTTTTGAGAATGCTTTATTTCTTTCTTCAATCAATGTGAGATCTTACACTTATGTGGACATAAGTCCAATTTGAACCACATAAGTCCAATTTGAACCTGAAGGAAGAAGGAAATCGAGGAGAAATCCCAGGATATACCAAGGTGGCTCCTGTGATTGCTCATTTTGTTTGGAAAATGGGTCGGCCTTTGTTTCTTCTCCACCTGTTTGCACAGAATCACAATACAGAAAACCCTATGCAAAATTTAGGTCCGAATCTCAATTTTGATAATGATTTCAAACACTGTGGATACTCGTTCAGCTGTCTGTGACAACAGTTATTCATTTTATTCACTTTCATTCTGGTCCCCATCCTCATATATCTGTCCCACTGTTTCTTTTGCTGCTACTTATCAGGAAGTTCCCAAATCAATTTCATTATCCGAGGAAGAAGGGATCCTAATGGCTTCTGATGTGTTTTGGTCCAATAATGACCCAACTGGAGAGAGCGAAAAAGGCATGCAGCAGGGTGATCTTTTGCAGCAGCAATCGAATTATCAGTGTGCAGAGGATTACCTACAACATCCTGATCTATCCTGGTATGATTTTAACTTTTCTTAATATTAATGAAATTCGAACACAGAGAGGAAAAAAAAAAAAAAAAAAATATATATATATATATATATATATATATATATATATATATATATANNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNATATATATATATATATATATATATATATATATATATATATATATAGGAGAAAGCATTTTGGAATAATGAATTGATTTTGCAATTTGGATTTGCAGCTTTGACATTGGGGAGATTGAAGATGTCGATGGAGATTGGTTAGGTTAGCATGATTCTTTGGTTTTATCTCATATCATGCTTTTGAATCATGAGAGAAACATTATCTTTTTCCCAATCAATCAATATATATATATATATATATATATGAATCATTAGTATTTTATGAATATTTAGAAGAAGACTACATTCAATGATTTTGAAACCAAGATAGGATCTTTTTATGGATACCGTTCACAGATTTTACAACATACAAACAAAGAAATATTATATTTCCTAAAAAACCAGAAAAAATCTAGTTTACCATATGGCTTAGTTCTTAACAGCCTTCTTTTCCTTCGAAAGAAACTGATTGAGTGGCCAAGTGAGACGAGTGGTGGGTTAGAATTGAAGCGGGTATCTGTCAATGCAATCCAGCCATGGGCTCCTGGCGGGCTTGCGGTTGCGCCTCATTGAGCGCCAAACTAAAGAGTTGCACTTGAACCCAGACCCAAAAGCCAGCTGCCAAATCCGATCCCCTGACTTGACCCTGTCTTTGGCCTCCAAGTAAGCCAATTCGTACCAAATGCTGCTGCTGGAAGTGTTTCCGAATCGGTGAAGTGTCATTCTAGAAGCTTCCATGTTTCTCTCGCTAAGCTCAAGGTTCCTCTGTAACTCATTCAATACTCCTTTGCTGGCTGCATGCACACAGAAGTGCTCGAATGCTTGCTTGTAATCTGGAATGTATGGCTTCTTTGTGTTCGGTACTCCACTGCCGCCGCCGGAGGAGAAGAATTGCCTCCAGACTAGAGCTGCGAAGAAGAGGAGCTGCTCGGAGAAGGGCAAAACGAGAGGTCCCAGGGTTGTGATGTTGGTTTTGAGAGCTTCGCCTCCGATTTCCATTAGGTCTTTGCTGACTTTTAGGCCTTTGAATCCTTGCTCGTCTTCTTCCTGGTAAACACACCTGCCACCCACCATGGAACATTAAAGATCAAAAGCAGTTGACTGTTTAGTTATTTCATACCTAAAAAGGAACGAAACTACGACATCGCTGATAGCATTAACTATTGATTTTATAGTACATCAATTACCACTAAACTATATTAATATTGGTAGATTGATTTACAAATATCTTAGTGATGAACACTGAAAAAATGACTATCA

mRNA sequence

GCTTAAAATTATCCAACAAAATGAACAGACGCAAATATACTCTCTAAGAGAGGAATATTGATGATCGTTTTCCCTTTTTCACTGGATTTTCAGAGCGAACTTTTGTATATTAGTCTCGAAAACTTCATCTGCTTCGATGAAGATGATGGTCTCGAATGGATATGCCGGCAGAGGAAGCAGTGGTTATGGATACGATGGTAGAAATTCGTTTAGAAACAAGATTTACAAGCGATTGGAACCTTGTTTGGTGATACCGCCGATGAGAGGTAAGCTGCTTGGCGCTATCATTAAGTTCCTCGATGGCGCTATCATCGGAGCTATTCCTGAAGTCACTTGCAGAGGTTTTGATGGCTGTTTGGATGCCATTTTAGCGTCCGGATTGCTCGATGAAGATGTTTCACATGCTCAACTTGTTAACCTTTCTCTACCCAATGGCGCGCTTCTGCAAGTACTCACAGGGAGCTATTTCGCCGCGAAGATACCTAAGGATAATGCTATTATCTCCTTCAACAACAGGCCAGCAACAGAGGCTGTTCCTTACTTTGAGCAGGGGATGTGTGGAAGATCTTGCTTGATGCTGCTGGAGCTATTGTTTCAGACAGAGATCAATCGAACTAAAAAAAGAAAAAGGAAACCGAAACAACTTGAGAGAGGAGAAGGCGGGGAAGAATATGGGAGGGTCGCGGTTCCATTACACCTGTTCCTGTGGCTGTGCGGCGCGGCTCCCATGGATTATTGGAAAACGTGGTTGCTCTTCTTCTCTGTCTCTGCCTTTTGCCTTACCCCAATCCGAAGAGCCTTGCGAGAAGTTCCCAAATCAATTTCATTATCCGAGGAAGAAGGGATCCTAATGGCTTCTGATGTGTTTTGGTCCAATAATGACCCAACTGGAGAGAGCGAAAAAGGCATGCAGCAGGGTGATCTTTTGCAGCAGCAATCGAATTATCAGTGTGCAGAGGATTACCTACAACATCCTGATCTATCCTGCTTTGACATTGGGGAGATTGAAGATGTCGATGGAGATTGGTTAGGTTAGCATGATTCTTTGGTTTTATCTCATATCATGCTTTTGAATCATGAGAGAAACATTATCTTTTTCCCAATCAATCAATATATATATATATATATATATATGAATCATTAGTATTTTATGAATATTTAGAAGAAGACTACATTCAATGATTTTGAAACCAAGATAGGATCTTTTTATGGATACCGTTCACAGATTTTACAACATACAAACAAAGAAATATTATATTTCCTAAAAAACCAGAAAAAATCTAGTTTACCATATGGCTTAGTTCTTAACAGCCTTCTTTTCCTTCGAAAGAAACTGATTGAGTGGCCAAGTGAGACGAGTGGTGGGTTAGAATTGAAGCGGGTATCTGTCAATGCAATCCAGCCATGGGCTCCTGGCGGGCTTGCGGTTGCGCCTCATTGAGCGCCAAACTAAAGAGTTGCACTTGAACCCAGACCCAAAAGCCAGCTGCCAAATCCGATCCCCTGACTTGACCCTGTCTTTGGCCTCCAAGTAAGCCAATTCGTACCAAATGCTGCTGCTGGAAGTGTTTCCGAATCGGTGAAGTGTCATTCTAGAAGCTTCCATGTTTCTCTCGCTAAGCTCAAGGTTCCTCTGTAACTCATTCAATACTCCTTTGCTGGCTGCATGCACACAGAAGTGCTCGAATGCTTGCTTGTAATCTGGAATGTATGGCTTCTTTGTGTTCGGTACTCCACTGCCGCCGCCGGAGGAGAAGAATTGCCTCCAGACTAGAGCTGCGAAGAAGAGGAGCTGCTCGGAGAAGGGCAAAACGAGAGGTCCCAGGGTTGTGATGTTGGTTTTGAGAGCTTCGCCTCCGATTTCCATTAGGTCTTTGCTGACTTTTAGGCCTTTGAATCCTTGCTCGTCTTCTTCCTGGTAAACACACCTGCCACCCACCATGGAACATTAAAGATCAAAAGCAGTTGACTGTTTAGTTATTTCATACCTAAAAAGGAACGAAACTACGACATCGCTGATAGCATTAACTATTGATTTTATAGTACATCAATTACCACTAAACTATATTAATATTGGTAGATTGATTTACAAATATCTTAGTGATGAACACTGAAAAAATGACTATCA

Coding sequence (CDS)

ATGAAGATGATGGTCTCGAATGGATATGCCGGCAGAGGAAGCAGTGGTTATGGATACGATGGTAGAAATTCGTTTAGAAACAAGATTTACAAGCGATTGGAACCTTGTTTGGTGATACCGCCGATGAGAGGTAAGCTGCTTGGCGCTATCATTAAGTTCCTCGATGGCGCTATCATCGGAGCTATTCCTGAAGTCACTTGCAGAGGTTTTGATGGCTGTTTGGATGCCATTTTAGCGTCCGGATTGCTCGATGAAGATGTTTCACATGCTCAACTTGTTAACCTTTCTCTACCCAATGGCGCGCTTCTGCAAGTACTCACAGGGAGCTATTTCGCCGCGAAGATACCTAAGGATAATGCTATTATCTCCTTCAACAACAGGCCAGCAACAGAGGCTGTTCCTTACTTTGAGCAGGGGATGTGTGGAAGATCTTGCTTGATGCTGCTGGAGCTATTGTTTCAGACAGAGATCAATCGAACTAAAAAAAGAAAAAGGAAACCGAAACAACTTGAGAGAGGAGAAGGCGGGGAAGAATATGGGAGGGTCGCGGTTCCATTACACCTGTTCCTGTGGCTGTGCGGCGCGGCTCCCATGGATTATTGGAAAACGTGGTTGCTCTTCTTCTCTGTCTCTGCCTTTTGCCTTACCCCAATCCGAAGAGCCTTGCGAGAAGTTCCCAAATCAATTTCATTATCCGAGGAAGAAGGGATCCTAATGGCTTCTGATGTGTTTTGGTCCAATAATGACCCAACTGGAGAGAGCGAAAAAGGCATGCAGCAGGGTGATCTTTTGCAGCAGCAATCGAATTATCAGTGTGCAGAGGATTACCTACAACATCCTGATCTATCCTGCTTTGACATTGGGGAGATTGAAGATGTCGATGGAGATTGGTTAGGTTAG

Protein sequence

MKMMVSNGYAGRGSSGYGYDGRNSFRNKIYKRLEPCLVIPPMRGKLLGAIIKFLDGAIIGAIPEVTCRGFDGCLDAILASGLLDEDVSHAQLVNLSLPNGALLQVLTGSYFAAKIPKDNAIISFNNRPATEAVPYFEQGMCGRSCLMLLELLFQTEINRTKKRKRKPKQLERGEGGEEYGRVAVPLHLFLWLCGAAPMDYWKTWLLFFSVSAFCLTPIRRALREVPKSISLSEEEGILMASDVFWSNNDPTGESEKGMQQGDLLQQQSNYQCAEDYLQHPDLSCFDIGEIEDVDGDWLG

Homology

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BLAST of Cp4.1LG06g02710 vs. TrEMBL
Match: A0A0A0L5H3_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_4G649660 PE=4 SV=1)

HSP 1 Score: 161.0 bits (406), Expect = 2.2e-36
Identity = 99/176 (56.25%), Postives = 105/176 (59.66%), Query Frame = 1


Query: 1   MKMMVSNGYAGRGSSGYGYDGRNSFRNKIYKRLEPCLVIPPMRGKLLGAIIKFLDGAIIG 60
           MK M+SNGY GR          NS  NKIYK+LE CLVIPP RG+   AIIKFL GA IG
Sbjct: 71  MKTMISNGYGGR----------NSNVNKIYKQLESCLVIPPPRGRPPRAIIKFLGGAFIG 130

Query: 61  AIPEVTC---------------------------------RGFDGCLDAILASGLLDEDV 120
           AIPEVT                                    F  CLD +LASGL DED+
Sbjct: 131 AIPEVTYSYLIEFLAKEGFLIISVPYNVTFDHADAARQVFERFHVCLDTVLASGLPDEDI 190

Query: 121 SHAQLVNLSL-----PNGALLQVLTGSYFAAKIPKDNAIISFNNRPATEAVPYFEQ 139
           S AQLVNL L      NGALLQVLTGSYF+ KIPK NAIISFNNRPATEAVPYFEQ
Sbjct: 191 SPAQLVNLPLFSVGHSNGALLQVLTGSYFSEKIPKANAIISFNNRPATEAVPYFEQ 236

[Close]

BLAST of Cp4.1LG06g02710 vs. TrEMBL
Match: A0A067KQ96_JATCU (Uncharacterized protein OS=Jatropha curcas GN=JCGZ_07570 PE=4 SV=1)

HSP 1 Score: 144.4 bits (363), Expect = 2.2e-31
Identity = 89/175 (50.86%), Postives = 101/175 (57.71%), Query Frame = 1


Query: 4   MVSNGYAGRGSSG-YGYDGRNSFRNK-IYKRLEPCLVIPPMRGKLLGAIIKFLDGAIIGA 63
           +VSNGY GR SS  + Y+  N+ RNK IY  ++ CL IPP +GK   AIIKFL GA IGA
Sbjct: 44  LVSNGYVGRSSSNSFTYNATNNNRNKKIYTSIDSCLAIPPPKGKNTRAIIKFLGGAFIGA 103

Query: 64  IPEVTC---------------------------------RGFDGCLDAILASGLLDEDVS 123
           +PEVT                                    F+ CLD IL SGL D D++
Sbjct: 104 VPEVTYGYLIELLAKEGFLIILVPYNVTFDHAHAANQVYERFNTCLDLILTSGLPDADLT 163

Query: 124 HAQLVNLSL-----PNGALLQVLTGSYFAAKIPKDNAIISFNNRPATEAVPYFEQ 139
            AQLV L +      NGALLQVLTGSYF   IPK N IISFNNRPATEAVPYFEQ
Sbjct: 164 AAQLVGLPIFSVGHSNGALLQVLTGSYFCDNIPKANVIISFNNRPATEAVPYFEQ 218

[Close]

BLAST of Cp4.1LG06g02710 vs. TrEMBL
Match: B9HCN9_POPTR (Uncharacterized protein OS=Populus trichocarpa GN=POPTR_0006s23430g PE=4 SV=2)

HSP 1 Score: 142.9 bits (359), Expect = 6.3e-31
Identity = 89/183 (48.63%), Postives = 103/183 (56.28%), Query Frame = 1


Query: 1   MKMMVSNGYAGRGSSGYGY-DGRNSFRNKIYKR------LEPCLVIPPMRGKLLGAIIKF 60
           +  MVSNGYAGR SS + Y DG     N  YK+      +E CLVIPP +G+   AIIKF
Sbjct: 52  LSRMVSNGYAGRSSSNFRYGDGNTVITNTNYKQRQKYTQMESCLVIPPPKGRKPRAIIKF 111

Query: 61  LDGAIIGAIPEVTC---------------------------------RGFDGCLDAILAS 120
           L GA IGA+PEVT                                    F+ CLD +L S
Sbjct: 112 LGGAFIGAVPEVTYSCLIELLAKDGYVVILVPYNVTFDHSKAADQVYERFNACLDLLLQS 171

Query: 121 GLLDEDVSHAQLVNLSL-----PNGALLQVLTGSYFAAKIPKDNAIISFNNRPATEAVPY 139
           GL  + ++ ++LV L L      NGALLQVLTGSYF  KIPK NAIISFNNRPATEAVPY
Sbjct: 172 GLPHDGLTASELVGLPLFSVGHSNGALLQVLTGSYFCEKIPKANAIISFNNRPATEAVPY 231

[Close]

BLAST of Cp4.1LG06g02710 vs. TrEMBL
Match: B9RR03_RICCO (Putative uncharacterized protein OS=Ricinus communis GN=RCOM_0708170 PE=4 SV=1)

HSP 1 Score: 139.0 bits (349), Expect = 9.1e-30
Identity = 85/176 (48.30%), Postives = 100/176 (56.82%), Query Frame = 1


Query: 4   MVSNGYAGRGSSGYGYDGRNSFRN---KIYKRLEPCLVIPPMRGKLLGAIIKFLDGAIIG 63
           MVSNGYAGR ++   +    S  N   K Y +++ C+VIPP +GK   AIIKFL GA IG
Sbjct: 53  MVSNGYAGRDANNLFFTNSTSTSNYDSKKYSKIDSCVVIPPPKGKKPRAIIKFLGGAFIG 112

Query: 64  AIPEVTC---------------------------------RGFDGCLDAILASGLLDEDV 123
           A+PEVT                                    F+ CLD +L SGL D ++
Sbjct: 113 AVPEVTYGYLIELLAKEGYVVVLVPYNVTFDHAHAANQVYEKFNACLDLLLTSGLPDANL 172

Query: 124 SHAQLVNLSL-----PNGALLQVLTGSYFAAKIPKDNAIISFNNRPATEAVPYFEQ 139
           + AQLV L +      NGALLQVLTGSYF   IPK NAIISFNNRPATEAVPYFEQ
Sbjct: 173 TPAQLVGLPVFSVGHSNGALLQVLTGSYFCDNIPKANAIISFNNRPATEAVPYFEQ 228

[Close]

BLAST of Cp4.1LG06g02710 vs. TrEMBL
Match: A0A059CUG0_EUCGR (Uncharacterized protein OS=Eucalyptus grandis GN=EUGRSUZ_C03178 PE=4 SV=1)

HSP 1 Score: 138.3 bits (347), Expect = 1.6e-29
Identity = 85/179 (47.49%), Postives = 100/179 (55.87%), Query Frame = 1


Query: 1   MKMMVSNGYAGRGSSGYGYDGRNSF---RNKIYKRLEPCLVIPPMRGKLLGAIIKFLDGA 60
           ++ MVS+GY G G  G       +    R KIYKRL+ CLVIPP  G+   AI+KFL GA
Sbjct: 54  LRHMVSDGYVGSGGFGVSTKADGALGNGRGKIYKRLDSCLVIPPPGGRKPRAIVKFLGGA 113

Query: 61  IIGAIPEVTC---------------------------------RGFDGCLDAILASGLLD 120
            IGA+PEVT                                    F  CLD +L SGL D
Sbjct: 114 FIGAVPEVTYSYLIELLAKEGFLIIAVPYNVTFDHARAASEVYEKFHCCLDNVLTSGLPD 173

Query: 121 EDVSHAQLVNLSL-----PNGALLQVLTGSYFAAKIPKDNAIISFNNRPATEAVPYFEQ 139
           + +S A LV+L L      NGALLQVL GSYF+ KIPK NAIIS+NNRPA+EAVPYFEQ
Sbjct: 174 DKLSAADLVDLPLFSVGHSNGALLQVLAGSYFSEKIPKANAIISYNNRPASEAVPYFEQ 232

[Close]

BLAST of Cp4.1LG06g02710 vs. TAIR10
Match: AT3G43540.1 (AT3G43540.1 Protein of unknown function (DUF1350))

HSP 1 Score: 117.1 bits (292), Expect = 1.9e-26
Identity = 71/154 (46.10%), Postives = 87/154 (56.49%), Query Frame = 1


Query: 24  SFRNKIYKRLEPCLVIPPM-RGKLLGAIIKFLDGAIIGAIPEVTC--------------- 83
           S  NK+Y RL+ CLVIPP  + K   AI+KFL GA +GA+PE+T                
Sbjct: 38  SRNNKVYTRLDSCLVIPPPPKFKKPRAIVKFLGGAFVGAVPELTYSYLKELLAKEGYLIV 97

Query: 84  ------------------RGFDGCLDAILASGLLDEDVSHAQLVNLSL-----PNGALLQ 139
                               F+ CLD I++SG+ + ++    L +L L      NGALLQ
Sbjct: 98  SVPYNVTFDHEQAAKQVYERFNSCLDTIVSSGIPNSNLKPGDLADLPLFSVGHSNGALLQ 157

[Close]

BLAST of Cp4.1LG06g02710 vs. NCBI nr
Match: gi|449447195|ref|XP_004141354.1| (PREDICTED: uncharacterized protein LOC101217829 isoform X2 [Cucumis sativus])

HSP 1 Score: 161.0 bits (406), Expect = 3.2e-36
Identity = 99/176 (56.25%), Postives = 105/176 (59.66%), Query Frame = 1


Query: 1   MKMMVSNGYAGRGSSGYGYDGRNSFRNKIYKRLEPCLVIPPMRGKLLGAIIKFLDGAIIG 60
           MK M+SNGY GR          NS  NKIYK+LE CLVIPP RG+   AIIKFL GA IG
Sbjct: 71  MKTMISNGYGGR----------NSNVNKIYKQLESCLVIPPPRGRPPRAIIKFLGGAFIG 130

Query: 61  AIPEVTC---------------------------------RGFDGCLDAILASGLLDEDV 120
           AIPEVT                                    F  CLD +LASGL DED+
Sbjct: 131 AIPEVTYSYLIEFLAKEGFLIISVPYNVTFDHADAARQVFERFHVCLDTVLASGLPDEDI 190

Query: 121 SHAQLVNLSL-----PNGALLQVLTGSYFAAKIPKDNAIISFNNRPATEAVPYFEQ 139
           S AQLVNL L      NGALLQVLTGSYF+ KIPK NAIISFNNRPATEAVPYFEQ
Sbjct: 191 SPAQLVNLPLFSVGHSNGALLQVLTGSYFSEKIPKANAIISFNNRPATEAVPYFEQ 236

[Close]

BLAST of Cp4.1LG06g02710 vs. NCBI nr
Match: gi|778696802|ref|XP_011654211.1| (PREDICTED: uncharacterized protein LOC101217829 isoform X3 [Cucumis sativus])

HSP 1 Score: 161.0 bits (406), Expect = 3.2e-36
Identity = 99/176 (56.25%), Postives = 105/176 (59.66%), Query Frame = 1


Query: 1   MKMMVSNGYAGRGSSGYGYDGRNSFRNKIYKRLEPCLVIPPMRGKLLGAIIKFLDGAIIG 60
           MK M+SNGY GR          NS  NKIYK+LE CLVIPP RG+   AIIKFL GA IG
Sbjct: 71  MKTMISNGYGGR----------NSNVNKIYKQLESCLVIPPPRGRPPRAIIKFLGGAFIG 130

Query: 61  AIPEVTC---------------------------------RGFDGCLDAILASGLLDEDV 120
           AIPEVT                                    F  CLD +LASGL DED+
Sbjct: 131 AIPEVTYSYLIEFLAKEGFLIISVPYNVTFDHADAARQVFERFHVCLDTVLASGLPDEDI 190

Query: 121 SHAQLVNLSL-----PNGALLQVLTGSYFAAKIPKDNAIISFNNRPATEAVPYFEQ 139
           S AQLVNL L      NGALLQVLTGSYF+ KIPK NAIISFNNRPATEAVPYFEQ
Sbjct: 191 SPAQLVNLPLFSVGHSNGALLQVLTGSYFSEKIPKANAIISFNNRPATEAVPYFEQ 236

[Close]

BLAST of Cp4.1LG06g02710 vs. NCBI nr
Match: gi|778696797|ref|XP_011654210.1| (PREDICTED: uncharacterized protein LOC101217829 isoform X1 [Cucumis sativus])

HSP 1 Score: 161.0 bits (406), Expect = 3.2e-36
Identity = 99/176 (56.25%), Postives = 105/176 (59.66%), Query Frame = 1


Query: 1   MKMMVSNGYAGRGSSGYGYDGRNSFRNKIYKRLEPCLVIPPMRGKLLGAIIKFLDGAIIG 60
           MK M+SNGY GR          NS  NKIYK+LE CLVIPP RG+   AIIKFL GA IG
Sbjct: 71  MKTMISNGYGGR----------NSNVNKIYKQLESCLVIPPPRGRPPRAIIKFLGGAFIG 130

Query: 61  AIPEVTC---------------------------------RGFDGCLDAILASGLLDEDV 120
           AIPEVT                                    F  CLD +LASGL DED+
Sbjct: 131 AIPEVTYSYLIEFLAKEGFLIISVPYNVTFDHADAARQVFERFHVCLDTVLASGLPDEDI 190

Query: 121 SHAQLVNLSL-----PNGALLQVLTGSYFAAKIPKDNAIISFNNRPATEAVPYFEQ 139
           S AQLVNL L      NGALLQVLTGSYF+ KIPK NAIISFNNRPATEAVPYFEQ
Sbjct: 191 SPAQLVNLPLFSVGHSNGALLQVLTGSYFSEKIPKANAIISFNNRPATEAVPYFEQ 236

[Close]

BLAST of Cp4.1LG06g02710 vs. NCBI nr
Match: gi|659104090|ref|XP_008452805.1| (PREDICTED: uncharacterized protein LOC103493718 isoform X1 [Cucumis melo])

HSP 1 Score: 157.5 bits (397), Expect = 3.6e-35
Identity = 98/176 (55.68%), Postives = 104/176 (59.09%), Query Frame = 1


Query: 1   MKMMVSNGYAGRGSSGYGYDGRNSFRNKIYKRLEPCLVIPPMRGKLLGAIIKFLDGAIIG 60
           MK M+SNGY GR          NS   KIYK+LE CLVIPP RGK   AIIKFL GA IG
Sbjct: 71  MKKMISNGYGGR----------NSNVKKIYKQLESCLVIPPPRGKPPRAIIKFLGGAFIG 130

Query: 61  AIPEVTC---------------------------------RGFDGCLDAILASGLLDEDV 120
           AIPEV+                                    F  CLD ILASGL DED+
Sbjct: 131 AIPEVSYSYLIEFLAKEGFLIISVPYNVTFDHANAARQVFERFHVCLDTILASGLPDEDI 190

Query: 121 SHAQLVNLSL-----PNGALLQVLTGSYFAAKIPKDNAIISFNNRPATEAVPYFEQ 139
           S +QLVNL L      NGALLQVLTGSYF+ KIPK NAIISFNNRPATEAVPYFEQ
Sbjct: 191 SPSQLVNLPLFSVGHSNGALLQVLTGSYFSEKIPKANAIISFNNRPATEAVPYFEQ 236

[Close]

BLAST of Cp4.1LG06g02710 vs. NCBI nr
Match: gi|720057181|ref|XP_010273902.1| (PREDICTED: uncharacterized protein LOC104609313 isoform X1 [Nelumbo nucifera])

HSP 1 Score: 146.4 bits (368), Expect = 8.2e-32
Identity = 87/175 (49.71%), Postives = 102/175 (58.29%), Query Frame = 1


Query: 2   KMMVSNGYAGRGSSGYGYDGRNSFRNKIYKRLEPCLVIPPMRGKLLGAIIKFLDGAIIGA 61
           K MVSNGY GR           ++RNKIY+RL+ CLVIPP RG+   AIIKFL GA IGA
Sbjct: 77  KKMVSNGYVGR----------ETYRNKIYRRLDSCLVIPPSRGQKPRAIIKFLGGAFIGA 136

Query: 62  IPEVTC---------------------------------RGFDGCLDAILASGLLDEDVS 121
           +PEVT                                    F+ CLD IL SGL D ++S
Sbjct: 137 VPEVTYSYLIELLAKEGFLIISVPYNVTFDHSQAAQEVYEKFNSCLDMILTSGLPDANLS 196

Query: 122 HAQLVNLSL-----PNGALLQVLTGSYFAAKIPKDNAIISFNNRPATEAVPYFEQ 139
             +LV+L +      NGALLQ+LTGSYF+ KIPK NA IS+NNRPATEAVPYFEQ
Sbjct: 197 AGELVHLPIYSVGHSNGALLQLLTGSYFSEKIPKANAAISYNNRPATEAVPYFEQ 241

The following BLAST results are available for this feature:

BLAST of Cp4.1LG06g02710 vs. Swiss-Prot


Match Name	E-value	Identity	Description

BLAST of Cp4.1LG06g02710 vs. TrEMBL


Match Name	E-value	Identity	Description
A0A0A0L5H3_CUCSA	2.2e-36	56.25	Uncharacterized protein OS=Cucumis sativus GN=Csa_4G649660 PE=4 SV=1	[more]
A0A067KQ96_JATCU	2.2e-31	50.86	Uncharacterized protein OS=Jatropha curcas GN=JCGZ_07570 PE=4 SV=1	[more]
B9HCN9_POPTR	6.3e-31	48.63	Uncharacterized protein OS=Populus trichocarpa GN=POPTR_0006s23430g PE=4 SV=2	[more]
B9RR03_RICCO	9.1e-30	48.30	Putative uncharacterized protein OS=Ricinus communis GN=RCOM_0708170 PE=4 SV=1	[more]
A0A059CUG0_EUCGR	1.6e-29	47.49	Uncharacterized protein OS=Eucalyptus grandis GN=EUGRSUZ_C03178 PE=4 SV=1	[more]

BLAST of Cp4.1LG06g02710 vs. TAIR10


Match Name	E-value	Identity	Description
AT3G43540.1	1.9e-26	46.10	Protein of unknown function (DUF1350)	[more]

BLAST of Cp4.1LG06g02710 vs. NCBI nr


Match Name	E-value	Identity	Description
gi\|449447195\|ref\|XP_004141354.1\|	3.2e-36	56.25	PREDICTED: uncharacterized protein LOC101217829 isoform X2 [Cucumis sativus]	[more]
gi\|778696802\|ref\|XP_011654211.1\|	3.2e-36	56.25	PREDICTED: uncharacterized protein LOC101217829 isoform X3 [Cucumis sativus]	[more]
gi\|778696797\|ref\|XP_011654210.1\|	3.2e-36	56.25	PREDICTED: uncharacterized protein LOC101217829 isoform X1 [Cucumis sativus]	[more]
gi\|659104090\|ref\|XP_008452805.1\|	3.6e-35	55.68	PREDICTED: uncharacterized protein LOC103493718 isoform X1 [Cucumis melo]	[more]
gi\|720057181\|ref\|XP_010273902.1\|	8.2e-32	49.71	PREDICTED: uncharacterized protein LOC104609313 isoform X1 [Nelumbo nucifera]	[more]

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **INTERPRO**
Term	Definition

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0008150	biological_process
biological_process	GO:0008152	metabolic process
biological_process	GO:0006446	regulation of translational initiation
cellular_component	GO:0005575	cellular_component
cellular_component	GO:0009507	chloroplast
cellular_component	GO:0005840	ribosome
molecular_function	GO:0003674	molecular_function
molecular_function	GO:0016874	ligase activity
molecular_function	GO:0005515	protein binding
molecular_function	GO:0008270	zinc ion binding
molecular_function	GO:0003743	translation initiation factor activity

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Cp4.1LG06g02710.1	Cp4.1LG06g02710.1	mRNA

InterPro

Analysis Name: InterPro Annotations of Cucurbita pepo
Date Performed: 2017-12-02


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	PANTHER	PTHR34127	FAMILY NOT NAMED	coord: 2..138 score: 4.4
None	No IPR available	PANTHER	PTHR34127:SF1	SUBFAMILY NOT NAMED	coord: 2..138 score: 4.4

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
Cp4.1LG06g02710	Cucsa.271210	Cucumber (Gy14) v1	cgycpeB0711
Cp4.1LG06g02710	CmaCh09G003810	Cucurbita maxima (Rimu)	cmacpeB060
Cp4.1LG06g02710	CmaCh01G016880	Cucurbita maxima (Rimu)	cmacpeB507
Cp4.1LG06g02710	CmoCh09G003840	Cucurbita moschata (Rifu)	cmocpeB034
Cp4.1LG06g02710	CmoCh01G017410	Cucurbita moschata (Rifu)	cmocpeB467
Cp4.1LG06g02710	Csa4G649650	Cucumber (Chinese Long) v2	cpecuB782
Cp4.1LG06g02710	MELO3C016932	Melon (DHL92) v3.5.1	cpemeB734
Cp4.1LG06g02710	ClCG05G015950	Watermelon (Charleston Gray)	cpewcgB701
Cp4.1LG06g02710	CSPI04G25900	Wild cucumber (PI 183967)	cpecpiB784
Cp4.1LG06g02710	Lsi04G013680	Bottle gourd (USVL1VR-Ls)	cpelsiB638
Cp4.1LG06g02710	MELO3C016932.2	Melon (DHL92) v3.6.1	cpemedB867
Cp4.1LG06g02710	CsaV3_4G036220	Cucumber (Chinese Long) v3	cpecucB0969
Cp4.1LG06g02710	Bhi09G002514	Wax gourd	cpewgoB0997
Cp4.1LG06g02710	Carg02810	Silver-seed gourd	carcpeB0906
Cp4.1LG06g02710	Carg10733	Silver-seed gourd	carcpeB1083

The following gene(s) are paralogous to this gene:


Gene	Paralogue	Organism	Block
Cp4.1LG06g02710	Cp4.1LG02g05690	Cucurbita pepo (Zucchini)	cpecpeB459

The following block(s) are covering this gene:


Gene	Organism	Block
Cp4.1LG06g02710	Watermelon (97103) v1	cpewmB766
Cp4.1LG06g02710	Cucumber (Gy14) v2	cgybcpeB562