CmaCh09G003810 (gene) Cucurbita maxima (Rimu)

Overview
NameCmaCh09G003810
Typegene
OrganismCucurbita maxima (Cucurbita maxima (Rimu))
DescriptionUnknown protein
LocationCma_Chr09 : 1593164 .. 1597409 (-)
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDSexonthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGAACAGGTTTTGGAAATTGAAGTGAAGCATGATCTTGAATTTTCAGTCTGAGGGAAGGTGTTTAATCTACAGGGGCGCTCGTCCTGAGTGGATCATTTATTTTTTTGGATTCCATGAACCAAAGATAGAACGTAGCGATCATTCACTTCTAGATTTTGAATGATAGTAGTATAATAACCACTAATTGGAGCTAACTCACTTTGTTCTTGATTTCTTTCATGTATTGGGCATGGCATTGAGAATAGATAGACATCAAAGAAGACTGCATAACACGAGCTACTGTATTCCATTTGAGAATATTGATTGAAATGCTGCTCTAATCATTTGAGAATAGTGTTTGATGCCGATTCACATTCATCCTTGTCATTTTCATTCGATTCAAATACTACTTGCTACTTGTGCTATAATTTCTTTTTTTTTTCTTGAATCATGCAAAAAATCGTATCCTTGATCTTTGATGCGTTCATGACGAAACTTTCATTTATTATCCTTGTTTGTATGCAGGGATGTGTGGAAGATCTTGCTTGATGCCGCTGGAGCTATTGTTCCAGACAGAGATCAATCGAGTAAGTCTTGAATTCTCTGACTAAAATTTGTTGATCAGCTGCCCTCAGTTTTAAACTAGGTAACCCTTTAAAATTTCACGTCTGCTTCTTTACTTTGTCTCTTACCAGTCACTGTTTTCATATTGTCCACTTTGAGCATAAACGAGGTTAGCTTTGCTTTGAGCTTTCTCAAAATCTTTTAACAATAGAGATAATATTCTCCTTCTAAACTCACTACCATTCTCTAAATTAGCTAATTCCCCACTTACTCCCAATAATCCTCAACAAAAATAAAATTAATTTTCAAACTTGTTTTTTTGTTTCTAGGAATTGCCTTAGAATTCCTTAGAACATGGGTACTGGGTTGACTGGAGAAGAAGCCTGCTCTTTTTTTTTTTTTAATGTGATTGGGGTGGGTCGGTTGACTTAGTCATTTGCCCATTGAATTAGTACCCAATCTAAACAGGCTCCTGTCTAAAAATACAACCCATCTAGAAATGCTATCTAGCCCCATCCAACCTTTATAATTCAAGTTGGTTTCAGATTCTTGATTGAATACACACCTCTACGTGAAGATTTTAAAAATCAAGTGTATGAATGAACCTTTTTAAAGTTCTAGAATATTAATGAAATAAGTGCAAAAGTGTTAAAAGTATTTTCTACCATCTAGCCTTTTTTTTAATTTTTGAGTTAAGAATTAAGTTTTTAAAATCTATGAAAACAAAAATTTTGTAAATAAAAAATAAGTGTTTTTAAAATATATTTTTGTTGAAATTTGGTTAAGAATATATTGTAATGAAATTGTCAAAATTTTAAAACTTTTTTAGAGAGACTAAAAAAAGAAAAAAGAAATAGAAACAATTTGGGAGAGGGGAAGGCGGGGAAGAATATGGGAGGATCGCGGGTGAGATCAGAATCAGATGATCCAATCATTTGGTTCTTTTTCTTTTTCTCTCTTGTTAATTATCGTTTGATCGTTCTGCTATCTGCTGTCTTGGCGATTTCTTCAGCCATTACACCTGTTCCTGTGGCTGTGCGGCGCGGCTCCCATGGATTATTGGAAAACGTGGTTCCTCTTCTTCTCTGTCTCTGCCTTAACAAAATCGGAAGAGCCTTGTGAGTCTATGACCTCGGCCATTGCGTCATGAAACACCACATACAAATGCAACAAGGCACGTTTCCTTTTCCTTGCATCATTTCAATCTCTCTCTCTCTCTCTCTCTTTCTTTTTTTCCCCTTTTTGTCGGCTCTTCTGATACATGTAGGAGTAAGATTTGTTCTGCCGTTCTTTTTTTTTTTTTTTTTCTTTTGCCCTAAATTTTGTTTTCTTATGATTTGCATCATCGTTTTTAGTTCAATTTTATATGAATATCCTTTGTTCCAAATTTAGGATGGTTTCTGCTACTGTTGGAGTCGGTTCTGGGCTTTATTTTTTAGGCTGAAACTCTATTTTAGTGTTCATTTTAGTCATTGTAATGTAAAATTTTGCAAAGTTTAACCCAAATTCAATGCCCAATGAAAACAATAAGATAAATGGACCAAACTAGTCCCTTAAAAGTACAAAACCGAAGCTGAAACTATGATAAAAACATAGAGTATTTGAACTTTGGATAGAATTTTGGAATTTGGTGTGCCTCCTACTTCCTCGACATTGCAGGAAACTGGATAAAAGTCTGTCTCGGATTTCAGATCTAAAAACTTAATTGTCTTAACCTTTTGAACTCACGAAATTTGGGTTATTTCAAACCTGTATGAAACTTCAATTGCCTTTTCCAATCTGGCATGGACTTTTTAGATCTTCGAATTTAGTGAACTCTTTTCTTTAGGCAACCATTTTAACATCGAGAAATTTTCTTTTCATGTAAACTTGGTTTAACTTAGCAAGTTATTGATAGTTGATAAACCGCAAGAACCTACTTGCTATGTGGCTACTACTGTCTGGAAGAATAATATTTCCCTACTCACCCGACGTCAGAATCTTCTTACTGTTCACCCTGAATTTTTTACAGATGGGTGTGAGAGAAATTTTCTTTTGTATGAATTTAGTGGTGGTTCACAGAAACTAATTAGCCACTTATTAAGTATTTCCCAAGCCTGAAAGTTCCCCTCATGAGTGGTGATGGATAGGATTGTAAAAGGGAAAATGCAATGACACGTGTAGCCGGTGCTGCTTCGTAGACTTGTTCGAAAACGAGTCTCGGCATTGCGCAATCAGTGCTGAATATAAAGCCCACAATCCTTCCAACCGATCATCAATCCTCGTCTCTGCACTTCTTTTCCACCATAGAAAAAGCAAATTGATGAACATTAAAGAGTAAGCTCAAGATTTGGCATTATTTCTCTATGATAATTTCTTCCCTGGACTGCTAAAACAGTTGAACAAATCTTCTAAAAACCTCACACTGACCCAATGAACTCTTCGGACAAACTCTTCAACTTTGAAGCTTCACAAATCCTTGTGGGTACTTTTCAGGCTTTTCCTTTAGGTTTTAAAACGCGTTTGTTAGGGAGAGGTTTTGACATCCTTACTCTTAGAAGGAATGCTCTGTTCCCAGCCTCTTGGCTCAAATACTATTTGTAACTTCTTAAGCCAACCGCGTGTAGATATTGTCCATTTTAGTCCGTTACATATAACCGTAAGCCTCAGGGTTTAAAATCCATCTACTGTGAAGAAGTTTCTACACCTTTTTTAGAATGCTTCGTTTCTTTCTCCAATCAATATGTGGGGTCTTATACTTATGCCCAATTTGAACCCGAAGGATAAAGGAAATCCAGGAGAAATACCAGGATATACCAAGGTGGCTCCTGTGATTGCTCATTTTGTTTGGAAAATGGTTCTACCTTTATTTCATCTCCACCTGTTGCACAGAATCTCAATACAGAAAACCCTATGCAAAATTTAGGTCCGAATCTCAATTTTGATAATAATTTCAAAAACTGTGGATACTCGTTCAGCTGTCTGTGACAACAGTTATTCATTTTATTCACTTTCATTCTGGTCCCCATCTTCATATATCTGTCCCTCTGTTTCTTTTGTTGCTACTTATCAGGAAGTTCCCAAATCAATTTCATTATCCAAGGAAGAAGGGATCCTAATGGCTTCTGATGTGTTTTGGTCCAATAATGACCCAACTGGAGAGAGCGAAAAAGGCATGCAGCAGCATTCGAATTATCAGTGTGCAGAGGAGGATTACCTACAAGATCCTGATCTATCCTGGTATGATTTTAACTTTTCTTAATATTAAATGAAATTCGAACACAGAAGAAATATATATATATATATATATATATATATATATATATATATATATATATNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNATATATATATATATATATATATATATATATATATATATATATATATATTTAGGAGCAAGCTTTATGATCTATTTATTTGGGTGCTTGCATTTTGGATTAATGAATTGATTTTGCATTTTGGATTTGCAGCTTTGACATTGGGGAGATTGGTTAGGTTAGCATGATTCTTTGGTTTTATCTCATATCATGCTTTTGAATCATGAGAGAAACAATATCTTTTTCC

mRNA sequence

ATGAACAGGGATGTGTGGAAGATCTTGCTTGATGCCGCTGGAGCTATTGTTCCAGACAGAGATCAATCGACCATTACACCTGTTCCTGTGGCTGTGCGGCGCGGCTCCCATGGATTATTGGAAAACGTGGTTCCTCTTCTTCTCTGTCTCTGCCTTAACAAAATCGGAAGAGCCTTTTATTCATTTTATTCACTTTCATTCTGGTCCCCATCTTCATATATCTGTCCCTCTGTTTCTTTTGTTGCTACTTATCAGGAAGTTCCCAAATCAATTTCATTATCCAAGGAAGAAGGGATCCTAATGGCTTCTGATGTGTTTTGGTCCAATAATGACCCAACTGGAGAGAGCGAAAAAGGCATGCAGCAGCATTCGAATTATCAGTGTGCAGAGGAGGATTACCTACAAGATCCTGATCTATCCTGCTTTGACATTGGGGAGATTGGTTAGGTTAGCATGATTCTTTGGTTTTATCTCATATCATGCTTTTGAATCATGAGAGAAACAATATCTTTTTCC

Coding sequence (CDS)

ATGAACAGGGATGTGTGGAAGATCTTGCTTGATGCCGCTGGAGCTATTGTTCCAGACAGAGATCAATCGACCATTACACCTGTTCCTGTGGCTGTGCGGCGCGGCTCCCATGGATTATTGGAAAACGTGGTTCCTCTTCTTCTCTGTCTCTGCCTTAACAAAATCGGAAGAGCCTTTTATTCATTTTATTCACTTTCATTCTGGTCCCCATCTTCATATATCTGTCCCTCTGTTTCTTTTGTTGCTACTTATCAGGAAGTTCCCAAATCAATTTCATTATCCAAGGAAGAAGGGATCCTAATGGCTTCTGATGTGTTTTGGTCCAATAATGACCCAACTGGAGAGAGCGAAAAAGGCATGCAGCAGCATTCGAATTATCAGTGTGCAGAGGAGGATTACCTACAAGATCCTGATCTATCCTGCTTTGACATTGGGGAGATTGGTTAG

Protein sequence

MNRDVWKILLDAAGAIVPDRDQSTITPVPVAVRRGSHGLLENVVPLLLCLCLNKIGRAFYSFYSLSFWSPSSYICPSVSFVATYQEVPKSISLSKEEGILMASDVFWSNNDPTGESEKGMQQHSNYQCAEEDYLQDPDLSCFDIGEIG
Homology
[Close]
BLAST of CmaCh09G003810 vs. TrEMBL
Match: A0A0A0L091_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_4G649650 PE=4 SV=1)

HSP 1 Score: 99.0 bits (245), Expect = 5.2e-18
Identity = 61/135 (45.19%), Postives = 69/135 (51.11%), Query Frame = 1 

Query: 61  SFYSLSFWSP-SSYICPSVSFVATYQEVPKSISLSKEEGILMASDVFWSNNDPTGESEKG 120
           SF SLSFW P SSYICP++S   T+QE+PKS+SL +EEG LMASDVFW NNDPTG SEK 
Sbjct: 110 SFCSLSFWPPPSSYICPTLSCPDTHQELPKSVSLREEEGNLMASDVFWFNNDPTGVSEKD 169

Query: 121 MQ----------------------------------------------------QHSNYQ 143
           MQ                                                    Q+SNY 
Sbjct: 170 MQQEGVLEEEAMHAMADIKSMSMDVKALEIDGRHSSDNAMEFPDWLSINDDFLLQYSNYH 229

[Close]
BLAST of CmaCh09G003810 vs. NCBI nr
Match: gi|700200237|gb|KGN55395.1| (hypothetical protein Csa_4G649650 [Cucumis sativus])

HSP 1 Score: 99.0 bits (245), Expect = 7.4e-18
Identity = 61/135 (45.19%), Postives = 69/135 (51.11%), Query Frame = 1 

Query: 61  SFYSLSFWSP-SSYICPSVSFVATYQEVPKSISLSKEEGILMASDVFWSNNDPTGESEKG 120
           SF SLSFW P SSYICP++S   T+QE+PKS+SL +EEG LMASDVFW NNDPTG SEK 
Sbjct: 110 SFCSLSFWPPPSSYICPTLSCPDTHQELPKSVSLREEEGNLMASDVFWFNNDPTGVSEKD 169

Query: 121 MQ----------------------------------------------------QHSNYQ 143
           MQ                                                    Q+SNY 
Sbjct: 170 MQQEGVLEEEAMHAMADIKSMSMDVKALEIDGRHSSDNAMEFPDWLSINDDFLLQYSNYH 229

[Close]
BLAST of CmaCh09G003810 vs. NCBI nr
Match: gi|659104088|ref|XP_008452804.1| (PREDICTED: uncharacterized protein LOC103493717 [Cucumis melo])

HSP 1 Score: 84.7 bits (208), Expect = 1.5e-13
Identity = 46/66 (69.70%), Postives = 52/66 (78.79%), Query Frame = 1 

Query: 61  SFYSLSFWSP-SSYICPSVSFVATY-QEVPKSISLSKEEGILMASDVFWSNNDPTGESEK 120
           SF SLSFW P SSYICP+VS   T+ QE PKS+SL +EEG LMASDVFW NNDPTG +EK
Sbjct: 110 SFCSLSFWPPPSSYICPTVSCPDTHHQEFPKSVSLREEEGNLMASDVFWFNNDPTGVNEK 169

Query: 121 GMQQHS 125
            MQQ +
Sbjct: 170 DMQQEA 175

The following BLAST results are available for this feature:
BLAST of CmaCh09G003810 vs. Swiss-Prot
Match NameE-valueIdentityDescription
BLAST of CmaCh09G003810 vs. TrEMBL
Match NameE-valueIdentityDescription
A0A0A0L091_CUCSA5.2e-1845.19Uncharacterized protein OS=Cucumis sativus GN=Csa_4G649650 PE=4 SV=1[more]
BLAST of CmaCh09G003810 vs. TAIR10
Match NameE-valueIdentityDescription
BLAST of CmaCh09G003810 vs. NCBI nr
Match NameE-valueIdentityDescription
gi|700200237|gb|KGN55395.1|7.4e-1845.19hypothetical protein Csa_4G649650 [Cucumis sativus][more]
gi|659104088|ref|XP_008452804.1|1.5e-1369.70PREDICTED: uncharacterized protein LOC103493717 [Cucumis melo][more]
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0008150 biological_process
cellular_component GO:0005575 cellular_component
molecular_function GO:0003674 molecular_function
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
CmaCh09G003810.1CmaCh09G003810.1mRNA