CmoCh01G017420 (gene) Cucurbita moschata (Rifu) | Cucurbit Genomics Database (CuGenDB)

Overview


Name	CmoCh01G017420
Type	gene
Organism	Cucurbita moschata (Cucurbita moschata (Rifu))
Description	Hydroxyproline-rich glycoprotein family protein
Location	Cmo_Chr01 : 13002136 .. 13004146 (+)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

AGATTTGAGTTAGTCTTGCACATTTAAAGAATATGGATAGACTTGTTGCAAGAAATTTGTATTTCTTGTTTGTGAGTCGGTCCACCAGAATTAAGATCCATACTCTCTTTTTTGGAAGCATAAAAAAATCCCCAAAGTTATAAGAAAGACGAGACTACAACCACTACTTGCTTAATAGTAAAACGCCTTCCTCCCCGACTTGAGTTTCTTAGCTACCCAGCTCCTCTTCAAACCCAAAAACCTAAAATGACCTCGATAACTAAAAAAGGATTAATGAAAAGTGAGAAATAGAAAACAGAGAATAGTAAACAATAAAGTTATTAAACGACTCCTTATTATTTCCAAACCTGAAAATTTCTAAAACCAGTGAAGATGAAAGCATGGTAAAAAGAAGAAACAATGAAATATGTAGTTAGCCGAATAAGTAAAAGTAGAAAAGAGGTCGAAGGCATAGGGTACCCTACTTGTATGGCCGCCTTATAGGACTTGTTTTGGAACAACTCGCGGCGTAGGGTAATCGTGGCAGACAGAACTTAAAACCCACCATTCTCCCCCAACTGATCTTCAATCCTCATCTCCTCACCCTTTTTTAATCAGAGAAAAAAAGCAATATATGAACACTAAAGAGCAACCTCTAAATCTAAAACCAAACCCCCAATGAACTCTACAGACCAACTCTGCAACTTTGAAGCTACTAAAATCCCACAGCCACAGCCACAGCCACATGGAGAACGTAAGAAACAGGTTAGAAGGAGACGCCAAAGCCGAAGGCTTTACAAGCAAATGCCTCTGAATATGGCTGAAGCTAGAAGAGAGATTGTAACTGCACTCAAGCTTCACAGAGCATCAACAAAAGAAGCTAAAGAACAGCAACAAAAACAGGACCAACAGATTAAACATTCACTTCCGATGTACCCTCATCAATTCACCCCTTGTTTTGAACCTGAAAGAAGAATGAAATCCAGGAGAAATCCCAGGATATACCCTGATTGCTCATTTTATTTCGAAAATGGGTCTGATTTTATTGCTCCTCCGCCTGTTGCACAGAGTCTCCATTTAGATATCCCTATACAAACCTTAGGTCTGAATCCCAATTTTGAGGACACTAGTTCAGTTGTTTGCAGCAACAACAACAACAACCATTCATTTTATTCACTTTCATTCCTGCCCCCATCTTCATATATTTGTCCCACATTTGATTATGCTGCTACTACTCATCAGGAAGTTCCCAAATCAATTTCATTATCAGAGGAAGAAGGGAGGTTGATGGCTTCTGATTTGTTTTGGTCCAATAATTTCCCAACTGGAGAGAGTGAAAAGGAGATTCATGGGGCAGTGGAGGAGGAGGAGGAAGAGGAGGAGGCTATGGTGGCTGAGATCAGGTCTGTGGATGAGAAGCCTTTGGAGATTGATGGTCAGACTCACTGTACTTTTGAGAATGTTCCAACTGGACAGAGTGAAGAAGCCATGGAATTTCCAGATTGGTTGAGTATCAATGATGATTTTTTGCAGCCGCGTTCGAATTATCAGTTCTCAAATGAGGATTACCTTCAAGATCCTGACCTATCTTGGTACGAATTTAGCTTCCCTTAAATCCAAAACAAATTCAAATTTCAAACCCCAATGGAAAATATATACATTTAGGAGGTCGTTTTTATTTCTTACGGTTCTAGTGTGCCCTTTATTTCTTCCCCCCTTTTTTGGGTGTGTGCATTTTGGATTAATTTACTCTTTTTTTTTTCCCCCATTTCAATACATATTTGCATTTTGCAGCATGGACATTGGGGAGATCGAAGATGTGGATGGAGATTGGTTAGCATGATTGTTGGGTTTTTTATCTCATACCATGCTCTTTAATAATATGAGAAAACGAATGAAGCATCTTTTTTCCCCAAACGTGATTCCCTCCCCCTACATACTTTGATCAATATTTTTGCTATAAACTTCTAGTAATTCATCGCATGCTTTCTGATCCAATTCAACCTTTATATATATAGAGAGAGAGAGATGG

mRNA sequence

AGATTTGAGTTAGTCTTGCACATTTAAAGAATATGGATAGACTTGTTGCAAGAAATTTGTATTTCTTGTTTGTGAGTCGGTCCACCAGAATTAAGATCCATACTCTCTTTTTTGGAAGCATAAAAAAATCCCCAAAGTTATAAGAAAGACGAGACTACAACCACTACTTGCTTAATAGTAAAACGCCTTCCTCCCCGACTTGAGTTTCTTAGCTACCCAGCTCCTCTTCAAACCCAAAAACCTAAAATGACCTCGATAACTAAAAAAGGATTAATGAAAAGTGAGAAATAGAAAACAGAGAATAGTAAACAATAAAGTTATTAAACGACTCCTTATTATTTCCAAACCTGAAAATTTCTAAAACCAGTGAAGATGAAAGCATGGTAAAAAGAAGAAACAATGAAATATGTAGTTAGCCGAATAAGTAAAAGTAGAAAAGAGGTCGAAGGCATAGGGTACCCTACTTGTATGGCCGCCTTATAGGACTTGTTTTGGAACAACTCGCGGCGTAGGGTAATCGTGGCAGACAGAACTTAAAACCCACCATTCTCCCCCAACTGATCTTCAATCCTCATCTCCTCACCCTTTTTTAATCAGAGAAAAAAAGCAATATATGAACACTAAAGAGCAACCTCTAAATCTAAAACCAAACCCCCAATGAACTCTACAGACCAACTCTGCAACTTTGAAGCTACTAAAATCCCACAGCCACAGCCACAGCCACATGGAGAACGTAAGAAACAGGTTAGAAGGAGACGCCAAAGCCGAAGGCTTTACAAGCAAATGCCTCTGAATATGGCTGAAGCTAGAAGAGAGATTGTAACTGCACTCAAGCTTCACAGAGCATCAACAAAAGAAGCTAAAGAACAGCAACAAAAACAGGACCAACAGATTAAACATTCACTTCCGATGTACCCTCATCAATTCACCCCTTGTTTTGAACCTGAAAGAAGAATGAAATCCAGGAGAAATCCCAGGATATACCCTGATTGCTCATTTTATTTCGAAAATGGGTCTGATTTTATTGCTCCTCCGCCTGTTGCACAGAGTCTCCATTTAGATATCCCTATACAAACCTTAGGTCTGAATCCCAATTTTGAGGACACTAGTTCAGTTGTTTGCAGCAACAACAACAACAACCATTCATTTTATTCACTTTCATTCCTGCCCCCATCTTCATATATTTGTCCCACATTTGATTATGCTGCTACTACTCATCAGGAAGTTCCCAAATCAATTTCATTATCAGAGGAAGAAGGGAGGTTGATGGCTTCTGATTTGTTTTGGTCCAATAATTTCCCAACTGGAGAGAGTGAAAAGGAGATTCATGGGGCAGTGGAGGAGGAGGAGGAAGAGGAGGAGGCTATGGTGGCTGAGATCAGGTCTGTGGATGAGAAGCCTTTGGAGATTGATGGTCAGACTCACTGTACTTTTGAGAATGTTCCAACTGGACAGAGTGAAGAAGCCATGGAATTTCCAGATTGGTTGAGTATCAATGATGATTTTTTGCAGCCGCGTTCGAATTATCAGTTCTCAAATGAGGATTACCTTCAAGATCCTGACCTATCTTGCATGGACATTGGGGAGATCGAAGATGTGGATGGAGATTGGTTAGCATGATTGTTGGGTTTTTTATCTCATACCATGCTCTTTAATAATATGAGAAAACGAATGAAGCATCTTTTTTCCCCAAACGTGATTCCCTCCCCCTACATACTTTGATCAATATTTTTGCTATAAACTTCTAGTAATTCATCGCATGCTTTCTGATCCAATTCAACCTTTATATATATAGAGAGAGAGAGATGG

Coding sequence (CDS)

ATGAACTCTACAGACCAACTCTGCAACTTTGAAGCTACTAAAATCCCACAGCCACAGCCACAGCCACATGGAGAACGTAAGAAACAGGTTAGAAGGAGACGCCAAAGCCGAAGGCTTTACAAGCAAATGCCTCTGAATATGGCTGAAGCTAGAAGAGAGATTGTAACTGCACTCAAGCTTCACAGAGCATCAACAAAAGAAGCTAAAGAACAGCAACAAAAACAGGACCAACAGATTAAACATTCACTTCCGATGTACCCTCATCAATTCACCCCTTGTTTTGAACCTGAAAGAAGAATGAAATCCAGGAGAAATCCCAGGATATACCCTGATTGCTCATTTTATTTCGAAAATGGGTCTGATTTTATTGCTCCTCCGCCTGTTGCACAGAGTCTCCATTTAGATATCCCTATACAAACCTTAGGTCTGAATCCCAATTTTGAGGACACTAGTTCAGTTGTTTGCAGCAACAACAACAACAACCATTCATTTTATTCACTTTCATTCCTGCCCCCATCTTCATATATTTGTCCCACATTTGATTATGCTGCTACTACTCATCAGGAAGTTCCCAAATCAATTTCATTATCAGAGGAAGAAGGGAGGTTGATGGCTTCTGATTTGTTTTGGTCCAATAATTTCCCAACTGGAGAGAGTGAAAAGGAGATTCATGGGGCAGTGGAGGAGGAGGAGGAAGAGGAGGAGGCTATGGTGGCTGAGATCAGGTCTGTGGATGAGAAGCCTTTGGAGATTGATGGTCAGACTCACTGTACTTTTGAGAATGTTCCAACTGGACAGAGTGAAGAAGCCATGGAATTTCCAGATTGGTTGAGTATCAATGATGATTTTTTGCAGCCGCGTTCGAATTATCAGTTCTCAAATGAGGATTACCTTCAAGATCCTGACCTATCTTGCATGGACATTGGGGAGATCGAAGATGTGGATGGAGATTGGTTAGCATGA

Homology

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BLAST of CmoCh01G017420 vs. TrEMBL
Match: A0A0A0L091_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_4G649650 PE=4 SV=1)

HSP 1 Score: 245.4 bits (625), Expect = 9.7e-62
Identity = 161/269 (59.85%), Postives = 183/269 (68.03%), Query Frame = 1


Query: 47  MAEARREIVTALKLHRAS-TKEA-KEQQQKQDQQIKHSLPMYPHQFTPCFEPERRMKSRR 106
           MAEARREIVTALKLHRAS TKEA +EQQQKQDQ+ K S P++P QF  CFE E R KSRR
Sbjct: 1   MAEARREIVTALKLHRASSTKEAAREQQQKQDQESKQSFPLFP-QFGQCFEAEGRRKSRR 60

Query: 107 NPRIYPDCS----FYFENGSDFIAPPPVAQSLHLDIPIQTLGLNPNFEDTSSVVCSNNNN 166
           NPRIYPDCS    FY ENGS  +APPP  ++L+ +IPIQT   +    DT S        
Sbjct: 61  NPRIYPDCSYDCSFYLENGSGLVAPPP--ENLNTEIPIQTFDDDFKTLDTCS-------- 120

Query: 167 NHSFYSLSFLPP-SSYICPTFDYAATTHQEVPKSISLSEEEGRLMASDLFWSNNFPTGES 226
             SF SLSF PP SSYICPT      THQE+PKS+SL EEEG LMASD+FW NN PTG S
Sbjct: 121 --SFCSLSFWPPPSSYICPTLS-CPDTHQELPKSVSLREEEGNLMASDVFWFNNDPTGVS 180

Query: 227 EKEIHGAVEEEEEEEEAM--VAEIR--SVDEKPLEIDGQTHCTFENVPTGQSEEAMEFPD 286
           EK++    +E   EEEAM  +A+I+  S+D K LEIDG+            S+ AMEFPD
Sbjct: 181 EKDMQ---QEGVLEEEAMHAMADIKSMSMDVKALEIDGR----------HSSDNAMEFPD 240

Query: 287 WLSINDDFLQPRSNYQFSNEDYLQDPDLS 305
           WLSINDDFL   SNY    EDYLQDPDLS
Sbjct: 241 WLSINDDFLLQYSNYHCVEEDYLQDPDLS 242

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BLAST of CmoCh01G017420 vs. TrEMBL
Match: M5XIW4_PRUPE (Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa025477mg PE=4 SV=1)

HSP 1 Score: 170.6 bits (431), Expect = 3.0e-39
Identity = 142/361 (39.34%), Postives = 188/361 (52.08%), Query Frame = 1


Query: 10  FEATKIPQPQPQPHGERKKQVRRRRQSRRLYKQMPLNMAEARREIVTALKLHRASTKEAK 69
           F  T+    QP    + KKQVRRR  + R Y++  LNMAEARREIVTALK HRA+ K+A 
Sbjct: 74  FSETQQHTQQPHQPQQHKKQVRRRLHTSRPYQERLLNMAEARREIVTALKFHRAAMKQAS 133

Query: 70  EQQQK--QDQQIKHSLPMYPHQFTPCFEPERRMKSRRNPRIYPDCSFYFEN----GSDF- 129
           EQQQ+  QDQ+ +        Q  PCFE E R KSRRNPRIYP  +  +       SDF 
Sbjct: 134 EQQQQQHQDQEQQPQSQQLQPQPHPCFEQEGRTKSRRNPRIYPSSTANYPETLPFPSDFS 193

Query: 130 -----------------IAPPPVAQSLHLDIPIQTLGLNPNFEDTSSV--VCSNNNNNHS 189
                            IA PP  ++    +P QTLGLN NF+D +++     +++N+  
Sbjct: 194 HHQYPSVPNPYSWTASTIALPP--ENFDFTLPNQTLGLNLNFQDFNNINTTLYHSSNSPP 253

Query: 190 FYSLSFLPPSSYICPTFDYAATTHQEVPKSISLSEEEGRLMA-SDLFWSNNFPTGESEKE 249
           FYS S   PSS   P    A  T QE+P S ++S+ E    A +D+  S    +G     
Sbjct: 254 FYSTSASSPSSSSSPGLSVA--TDQEIPGSAAISQMEVEAPAVTDVTDSGITISGGG--G 313

Query: 250 IHGAVEEEEEEEEAMVAEIRSVDE----------------------KPLEIDG-QTHCTF 309
           +H A+++EE      +AEIRS+ E                      K +E+ G +     
Sbjct: 314 LHAAMDDEE------MAEIRSIGEQHQMEWNDTMNLVTSAWWFKFLKTMELGGPEGKPED 373

Query: 310 ENVPTGQSEEAMEFPDWLSINDDFLQPRSNYQFSNEDYLQDPDLSCMDIGEIEDVDGDWL 321
           +NV     +EAMEFP WL+ N+   Q   N  +S EDY QDP L CMDIGEIE +DG+WL
Sbjct: 374 DNVWYHPFDEAMEFPAWLNANESCFQHHLNDYYS-EDYFQDPALPCMDIGEIEGIDGEWL 421

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BLAST of CmoCh01G017420 vs. TrEMBL
Match: A0A067G299_CITSI (Uncharacterized protein OS=Citrus sinensis GN=CISIN_1g046333mg PE=4 SV=1)

HSP 1 Score: 163.7 bits (413), Expect = 3.7e-37
Identity = 132/347 (38.04%), Postives = 182/347 (52.45%), Query Frame = 1


Query: 13  TKIPQPQ-PQPHGERKKQVRRRRQSRRLYKQMPLNMAEARREIVTALKLHRASTKEAKEQ 72
           ++IP+ Q PQ   + KKQVRRR  + R Y++  LNMAEARREIVTALK HRA+ K+A EQ
Sbjct: 63  SEIPETQQPQQPQQHKKQVRRRLHTSRPYQERLLNMAEARREIVTALKFHRAAMKQASEQ 122

Query: 73  QQKQD--QQIKHSLPMYPHQFTPCFEPERRMKSRRNPRIYPDCSFYFENGSDFIAPPP-- 132
           QQ+Q+  QQ++ S P++     PCFE E ++KSRRNPRIYP     F   S    PPP  
Sbjct: 123 QQQQEQQQQLRQSQPLH-LSTQPCFEQEGKLKSRRNPRIYPSNIANFSYSSFSCPPPPNS 182

Query: 133 -----------VAQSLHLDIPIQTLGLNPNFEDTSSV--VCSNNNNNHSFYSLSFLPPSS 192
                        ++L+  +P QTLGLN N  D +++     NN+NN S YS S   PSS
Sbjct: 183 YSWPASQVPSAFPEALNFPLPNQTLGLNLNLHDFNNLDTTIYNNSNNPSIYSYS--SPSS 242

Query: 193 YICPTFDYAATTHQEVPKSISLSEEEGRLMASDLFWSNNFPTGESEKEIHGAVEEEEEEE 252
              P    A   H       ++S++ G   A      ++   G     +H A+ +EE   
Sbjct: 243 SSSPPLSVATEEH----PFTAISQDMGGPTAMTNVLDSSGGIG-----LHPALGDEE--- 302

Query: 253 EAMVAEIRSVDEK-PLEIDGQTHCT--------FENVPTGQSE------------EAMEF 312
              +AEIRS+ E+  +E + + +           +N+  G  E            E MEF
Sbjct: 303 ---MAEIRSIGEQHQMEWNDKMNLVTSAWWFKFLKNMEPGPEEMNSEDDGFHPFDEVMEF 362

Query: 313 PDWLSINDDFLQPRSNYQFSNEDYLQDPDLSCMDIGEIEDVDGDWLA 321
           P WL+ N+  LQ   N  +  +DY QDP L CMDIGE E +D +WL+
Sbjct: 363 PAWLNANESCLQQHFN-DYCPDDYFQDPALPCMDIGEFEGMDSEWLS 390

[Close]

BLAST of CmoCh01G017420 vs. TrEMBL
Match: V4UUB5_9ROSI (Uncharacterized protein OS=Citrus clementina GN=CICLE_v10008490mg PE=4 SV=1)

HSP 1 Score: 159.8 bits (403), Expect = 5.4e-36
Identity = 131/351 (37.32%), Postives = 181/351 (51.57%), Query Frame = 1


Query: 13  TKIPQPQ-PQPHGERKKQVRRRRQSRRLYKQMPLNMAEARREIVTALKLHRASTKEAKEQ 72
           ++IP+ Q PQ   + KKQVRRR  + R Y++  LNMAEARREIVTALK HRA+ K+A EQ
Sbjct: 76  SEIPETQQPQQPQQHKKQVRRRLHTSRPYQERLLNMAEARREIVTALKFHRAAMKQASEQ 135

Query: 73  QQKQD-----QQIKHSLPMYPHQFTPCFEPERRMKSRRNPRIYPDCSFYFENGSDFIAPP 132
           Q +Q+     QQ++ S P++     PCFE E ++KSRRNPRIYP     F   S    PP
Sbjct: 136 QHQQEQAEQQQQLQQSQPLH-LSTQPCFEQEGKLKSRRNPRIYPSNIANFSYSSFSCRPP 195

Query: 133 P--------------VAQSLHLDIPIQTLGLNPNFEDTSSV--VCSNNNNNHSFYSLSFL 192
           P                ++L+  +P QTLGLN N  D +++     NN+NN S YS S  
Sbjct: 196 PPNSYSWPASQVPSAFPEALNFPLPNQTLGLNLNLHDFNNLDTTIYNNSNNPSIYSYS-- 255

Query: 193 PPSSYICPTFDYAATTHQEVPKSISLSEEEGRLMASDLFWSNNFPTGESEKEIHGAVEEE 252
            PSS   P    A   H       ++S++ G   A      ++   G     +H A+ +E
Sbjct: 256 SPSSSSSPPLSVATEEH----PFTAISQDMGGPTAMTNVLDSSGGIG-----LHPALGDE 315

Query: 253 EEEEEAMVAEIRSVDEK-PLEIDGQTHCT--------FENVPTGQSE------------E 312
           E      +AEIRS+ E+  +E + + +           +N+  G  E            E
Sbjct: 316 E------MAEIRSIGEQHQMEWNDKMNLVTSAWWFKFLKNMEPGPEEMNSEDDGFHPFDE 375

Query: 313 AMEFPDWLSINDDFLQPRSNYQFSNEDYLQDPDLSCMDIGEIEDVDGDWLA 321
            MEFP WL+ N+  LQ   N  +  +DY QDP L CMDIGE E +D +WL+
Sbjct: 376 VMEFPAWLNANESCLQQHFN-DYCPDDYFQDPALPCMDIGEFEGMDSEWLS 407

[Close]

BLAST of CmoCh01G017420 vs. TrEMBL
Match: A0A061GLU2_THECC (Hydroxyproline-rich glycoprotein family protein OS=Theobroma cacao GN=TCM_037421 PE=4 SV=1)

HSP 1 Score: 156.0 bits (393), Expect = 7.7e-35
Identity = 135/353 (38.24%), Postives = 178/353 (50.42%), Query Frame = 1


Query: 19  QPQPHGERKKQVRRRRQSRRLYKQMPLNMAEARREIVTALKLHRASTKEAKEQQQKQDQQ 78
           QPQP  ++KKQVRRR  + R Y++  LNMAEARREIVTALK HRA+ K+A EQQQ+Q  Q
Sbjct: 82  QPQPPQQQKKQVRRRLHTSRPYQERLLNMAEARREIVTALKFHRAAMKQANEQQQQQGLQ 141

Query: 79  IKHSLPMYPHQFTPCFEPERRMKSRRNPRIYPD-----CSFYFENGS--------DFIAP 138
            + S         P FE E + KSRRNPRIYP       ++  EN S          + P
Sbjct: 142 QQQSSETSHLSSPPPFEQESKKKSRRNPRIYPSNTNNFSTYNLENFSYSSCSQRYPPLPP 201

Query: 139 PP----------------VAQSLHLDIPIQTLGLNPNFEDTSSV--VCSNNNNNHSFYSL 198
           PP                   +L+  +P Q LGLN NF D +++     +N+NN S YS 
Sbjct: 202 PPPPNPYSWPASPIPFPSATDTLNFTLPNQPLGLNLNFHDFNNIDTTLYHNSNNPSIYSS 261

Query: 199 SFLPPSSYICPTFDYAATTHQEVPKSISLSEEEGRLMASDLFWSNNFPTGESEKEIHGAV 258
           S   PSS   PT         E   S ++S E G    +DL  + ++  G     +H A+
Sbjct: 262 S--SPSSSSSPTLSVVT----EEVASAAISHEVGPTAMADL--AESYGGG----GLHQAI 321

Query: 259 EEEEEEEEAMVAEIRSVDEK-PLEIDGQTHC-----------TFENVPTGQSE------- 318
            +EE      +AEIRS+ E+  +E +   +            T E  P  ++E       
Sbjct: 322 NDEE------MAEIRSLGEQHQMEWNDTMNLVTSAWWFKFLKTMELGPEVKAEDDGYQPF 381

Query: 319 -EAMEFPDWLSINDDFLQPRSNYQFSNEDYLQDPDLSCMDIGEIEDVDGDWLA 321
            + MEFP WL+ ND  LQ   N     +DY QDP L CMDIGEIE +DG+WLA
Sbjct: 382 DQVMEFPAWLNANDSCLQQHFN-DLCPDDYFQDPALPCMDIGEIEGMDGEWLA 415

[Close]

BLAST of CmoCh01G017420 vs. TAIR10
Match: AT5G21280.1 (AT5G21280.1 hydroxyproline-rich glycoprotein family protein)

HSP 1 Score: 88.2 bits (217), Expect = 1.0e-17
Identity = 101/313 (32.27%), Postives = 137/313 (43.77%), Query Frame = 1


Query: 19  QPQPHGERKKQVRRRRQSRRLYKQMPLNMAEARREIVTALKLHRASTKEAKEQQQKQDQQ 78
           Q Q H   KKQVRRR  + R Y++  LNMAEARREIVTALK HRAS ++A         +
Sbjct: 48  QTQTH---KKQVRRRLHTSRPYQERLLNMAEARREIVTALKQHRASMRQA--------TR 107

Query: 79  IKHSLPMYPHQFTPCFEPERRMKSRRNPRIYPDCSFYFENGSDFIAPPPVAQSLHLDIPI 138
           I    P  P Q    F P         P   P   F + N            SL+  +P 
Sbjct: 108 IPPPQPPPPPQPLNLFSPP--------PPPPPPDPFSWTN-----------PSLNFLLPN 167

Query: 139 QTLGLNPNFED------TSSVVCSNNNNNHSFYSLSFLPPSSYI----CPTFDYAATTHQ 198
           Q LGLN NF+D      TSS   S+++++ S  S S  P + +I     P   +   T  
Sbjct: 168 QPLGLNLNFQDFNDFIQTSSTTSSSSSSSTSSSSSSIFPTNPHIYSSPSPPPTFTTATSD 227

Query: 199 EVPKSISLSEEEGRLMASDLFWSNNFPTGESEKEIHGAVEEEEEEEEAMVAEIRSVDEKP 258
             P+  S S  E  ++ S  +WS                   E   + +  EI+   E+ 
Sbjct: 228 SAPQLPSSSNGENNVVTS-AWWS-------------------ELMLKTVEPEIKPETEEV 287

Query: 259 LEIDGQTHCTFENVPTGQSEEAMEFPDWLSINDDFLQPRSNYQFSNEDYLQDPDLSCMDI 318
           + ++      F +V        MEFP WL+  ++ L    N          +P LSCM+I
Sbjct: 288 IVVEDDVFPKFSDV--------MEFPSWLNQTEEELFHPYNLTDHYSSSPHNPPLSCMEI 302

Query: 319 GEIEDVDG-DWLA 321
           GEIE +DG DWLA
Sbjct: 348 GEIEGMDGDDWLA 302

[Close]

BLAST of CmoCh01G017420 vs. NCBI nr
Match: gi|659104088|ref|XP_008452804.1| (PREDICTED: uncharacterized protein LOC103493717 [Cucumis melo])

HSP 1 Score: 252.3 bits (643), Expect = 1.1e-63
Identity = 161/286 (56.29%), Postives = 187/286 (65.38%), Query Frame = 1


Query: 47  MAEARREIVTALKLHRAS-TKEA-KEQQQKQDQQIKHSLPMYPHQFTPCFEPERRMKSRR 106
           MAEARREIVTALKLHRAS TKEA +EQQQKQDQ+ K S P++P +   CFE E R KS+R
Sbjct: 1   MAEARREIVTALKLHRASSTKEAAREQQQKQDQESKQSFPLFP-ELGQCFEAEGRRKSKR 60

Query: 107 NPRIYP----DCSFYFENGSDFIAPPPVAQSLHLDIPIQTLGLNPNFEDTSSVVCSNNNN 166
           NPRIYP    DCSFY ENGS F+APPP  ++L+ +IPIQT   +    DT S        
Sbjct: 61  NPRIYPSCSYDCSFYLENGSGFVAPPP--ENLNTEIPIQTFDDDFKTLDTCS-------- 120

Query: 167 NHSFYSLSFLPP-SSYICPTFDYAATTHQEVPKSISLSEEEGRLMASDLFWSNNFPTGES 226
             SF SLSF PP SSYICPT     T HQE PKS+SL EEEG LMASD+FW NN PTG +
Sbjct: 121 --SFCSLSFWPPPSSYICPTVSCPDTHHQEFPKSVSLREEEGNLMASDVFWFNNDPTGVN 180

Query: 227 EKEIHGAVEEEEEEEEAMVAEI-----RSVDEKPLEIDGQTHCTFENVPTGQSEEAMEFP 286
           EK++    +E   EEEAM   +      S+D K LEID              S+ AM FP
Sbjct: 181 EKDMQ---QEAVLEEEAMAMAMDDLKSMSMDVKALEIDCH----------HSSDNAMAFP 240

Query: 287 DWLSINDDFLQPRSNYQFSNEDYLQDPDLSCMDIGEIEDVDGDWLA 321
           DW+SINDD LQ  SNY    ED LQ+PDLSC DIG+IED+  +WLA
Sbjct: 241 DWMSINDDSLQQYSNYHCVEEDCLQEPDLSCFDIGKIEDMGKEWLA 260

[Close]

BLAST of CmoCh01G017420 vs. NCBI nr
Match: gi|700200237|gb|KGN55395.1| (hypothetical protein Csa_4G649650 [Cucumis sativus])

HSP 1 Score: 245.4 bits (625), Expect = 1.4e-61
Identity = 161/269 (59.85%), Postives = 183/269 (68.03%), Query Frame = 1


Query: 47  MAEARREIVTALKLHRAS-TKEA-KEQQQKQDQQIKHSLPMYPHQFTPCFEPERRMKSRR 106
           MAEARREIVTALKLHRAS TKEA +EQQQKQDQ+ K S P++P QF  CFE E R KSRR
Sbjct: 1   MAEARREIVTALKLHRASSTKEAAREQQQKQDQESKQSFPLFP-QFGQCFEAEGRRKSRR 60

Query: 107 NPRIYPDCS----FYFENGSDFIAPPPVAQSLHLDIPIQTLGLNPNFEDTSSVVCSNNNN 166
           NPRIYPDCS    FY ENGS  +APPP  ++L+ +IPIQT   +    DT S        
Sbjct: 61  NPRIYPDCSYDCSFYLENGSGLVAPPP--ENLNTEIPIQTFDDDFKTLDTCS-------- 120

Query: 167 NHSFYSLSFLPP-SSYICPTFDYAATTHQEVPKSISLSEEEGRLMASDLFWSNNFPTGES 226
             SF SLSF PP SSYICPT      THQE+PKS+SL EEEG LMASD+FW NN PTG S
Sbjct: 121 --SFCSLSFWPPPSSYICPTLS-CPDTHQELPKSVSLREEEGNLMASDVFWFNNDPTGVS 180

Query: 227 EKEIHGAVEEEEEEEEAM--VAEIR--SVDEKPLEIDGQTHCTFENVPTGQSEEAMEFPD 286
           EK++    +E   EEEAM  +A+I+  S+D K LEIDG+            S+ AMEFPD
Sbjct: 181 EKDMQ---QEGVLEEEAMHAMADIKSMSMDVKALEIDGR----------HSSDNAMEFPD 240

Query: 287 WLSINDDFLQPRSNYQFSNEDYLQDPDLS 305
           WLSINDDFL   SNY    EDYLQDPDLS
Sbjct: 241 WLSINDDFLLQYSNYHCVEEDYLQDPDLS 242

[Close]

BLAST of CmoCh01G017420 vs. NCBI nr
Match: gi|694356596|ref|XP_009359049.1| (PREDICTED: uncharacterized protein LOC103949662 [Pyrus x bretschneideri])

HSP 1 Score: 173.3 bits (438), Expect = 6.7e-40
Identity = 137/369 (37.13%), Postives = 182/369 (49.32%), Query Frame = 1


Query: 9   NFEATKIPQPQPQPHGERKKQVRRRRQSRRLYKQMPLNMAEARREIVTALKLHRASTKEA 68
           NF  T+    QP    + KKQVRRR  + R Y++  LNMAEARREIVTALK HRA+ K+A
Sbjct: 60  NFSETRQHTQQPHQPQQHKKQVRRRLHTSRPYQERLLNMAEARREIVTALKFHRAAMKQA 119

Query: 69  KEQQQKQDQQIKHSLPMYPHQFTPCFEPERRMKSRRNPRIYP--------------DCSF 128
            EQQ++QDQQ +   P+ P    P  E E R+KSRRNPRIYP              D S+
Sbjct: 120 TEQQKQQDQQPQEQQPLEPQTPRPRLEQEARIKSRRNPRIYPSSGSNYQETPPFSSDFSY 179

Query: 129 YFENGSDF----------IAPPPVAQSLHLDIPIQTLGLNPNFEDTSSVVCS--NNNNNH 188
            + N   +          IAPPP  ++    +P QTLGLN NF+D +++  +  ++ N+ 
Sbjct: 180 QYPNPYQYSNPYSWTPSTIAPPPPYENFDFTLPNQTLGLNLNFQDFNNINTTLYHHTNSP 239

Query: 189 SFYSLSFLPPSSYICPTFDYAATTHQEVPKSI------SLSEEEGRLMASDLFWSNNFPT 248
           S YS S   PSS   PT   A TT  E+  S       S  E E     +D   S    T
Sbjct: 240 SIYSASTSSPSSSSSPTLS-ATTTDPEILTSAAGASFTSHIEAEDAPAVADAVDSAGVIT 299

Query: 249 GESEKEIHGAVEEEEEEEEAMVAEIRSVDE----------------------KPLEIDGQ 308
                 +H A++++E      +AEIRS+ E                      K +E+ G 
Sbjct: 300 ITGGDGMHAAMDDKE------MAEIRSIGEQHQIEWNDTMNLVTSAWWFKFLKAMELGGG 359

Query: 309 THCTFENVPTGQS---EEAMEFPDWLSINDDFLQPRSNYQFSNEDYLQDPDLSCMDIGEI 321
                E+   G     +E MEFP WL+ N+   Q        ++DY QDP L CMDIGEI
Sbjct: 360 PQVKDEDDDDGYHHPFDEVMEFPAWLNANESGFQNDHLNDCYSDDYFQDPALPCMDIGEI 419

[Close]

BLAST of CmoCh01G017420 vs. NCBI nr
Match: gi|596252667|ref|XP_007224690.1| (hypothetical protein PRUPE_ppa025477mg [Prunus persica])

HSP 1 Score: 170.6 bits (431), Expect = 4.4e-39
Identity = 142/361 (39.34%), Postives = 188/361 (52.08%), Query Frame = 1


Query: 10  FEATKIPQPQPQPHGERKKQVRRRRQSRRLYKQMPLNMAEARREIVTALKLHRASTKEAK 69
           F  T+    QP    + KKQVRRR  + R Y++  LNMAEARREIVTALK HRA+ K+A 
Sbjct: 74  FSETQQHTQQPHQPQQHKKQVRRRLHTSRPYQERLLNMAEARREIVTALKFHRAAMKQAS 133

Query: 70  EQQQK--QDQQIKHSLPMYPHQFTPCFEPERRMKSRRNPRIYPDCSFYFEN----GSDF- 129
           EQQQ+  QDQ+ +        Q  PCFE E R KSRRNPRIYP  +  +       SDF 
Sbjct: 134 EQQQQQHQDQEQQPQSQQLQPQPHPCFEQEGRTKSRRNPRIYPSSTANYPETLPFPSDFS 193

Query: 130 -----------------IAPPPVAQSLHLDIPIQTLGLNPNFEDTSSV--VCSNNNNNHS 189
                            IA PP  ++    +P QTLGLN NF+D +++     +++N+  
Sbjct: 194 HHQYPSVPNPYSWTASTIALPP--ENFDFTLPNQTLGLNLNFQDFNNINTTLYHSSNSPP 253

Query: 190 FYSLSFLPPSSYICPTFDYAATTHQEVPKSISLSEEEGRLMA-SDLFWSNNFPTGESEKE 249
           FYS S   PSS   P    A  T QE+P S ++S+ E    A +D+  S    +G     
Sbjct: 254 FYSTSASSPSSSSSPGLSVA--TDQEIPGSAAISQMEVEAPAVTDVTDSGITISGGG--G 313

Query: 250 IHGAVEEEEEEEEAMVAEIRSVDE----------------------KPLEIDG-QTHCTF 309
           +H A+++EE      +AEIRS+ E                      K +E+ G +     
Sbjct: 314 LHAAMDDEE------MAEIRSIGEQHQMEWNDTMNLVTSAWWFKFLKTMELGGPEGKPED 373

Query: 310 ENVPTGQSEEAMEFPDWLSINDDFLQPRSNYQFSNEDYLQDPDLSCMDIGEIEDVDGDWL 321
           +NV     +EAMEFP WL+ N+   Q   N  +S EDY QDP L CMDIGEIE +DG+WL
Sbjct: 374 DNVWYHPFDEAMEFPAWLNANESCFQHHLNDYYS-EDYFQDPALPCMDIGEIEGIDGEWL 421

[Close]

BLAST of CmoCh01G017420 vs. NCBI nr
Match: gi|645227611|ref|XP_008220604.1| (PREDICTED: protein similar [Prunus mume])

HSP 1 Score: 167.2 bits (422), Expect = 4.8e-38
Identity = 144/358 (40.22%), Postives = 187/358 (52.23%), Query Frame = 1


Query: 18  PQPQPHGERKKQVRRRRQSRRLYKQMPLNMAEARREIVTALKLHRASTKEAKEQQQK--Q 77
           PQPQ H   KKQVRRR  + R Y++  LNMAEARREIVTALK HRA+ K+A EQQQ+  Q
Sbjct: 85  PQPQQH---KKQVRRRLHTSRPYQERLLNMAEARREIVTALKFHRAAMKQASEQQQQQHQ 144

Query: 78  DQQIKHSLPMYPHQFTPCFEPERRMKSRRNPRIYPDCSFYFEN----GSDF--------- 137
           DQ+ +        Q  PCFE E R KSRRNPRIYP  +  +       SDF         
Sbjct: 145 DQEQQPQSQQLQPQPHPCFEQEGRTKSRRNPRIYPSSTANYPETLPFPSDFSHHQYPSVP 204

Query: 138 ---------IAPPPVAQSLHLDIPIQTLGLNPNFEDTSSV--VCSNNNNNHSFY----SL 197
                    IA PP  ++    +P QTLGLN NF+D +++     +++N+  FY    S 
Sbjct: 205 NPYSWTASTIALPP--ENFDFTLPNQTLGLNLNFQDFNNINTTLYHSSNSPPFYSTSASA 264

Query: 198 SFLPPSSYICPTFDYAATTHQEVPKSISLSEEEGRLMA-SDLFWSNNFPTGESEKEIHGA 257
           S   PSS   P    A  T QE+P S ++S+ E    A +D+  S    +G     +H A
Sbjct: 265 SASSPSSSSSPGLSVA--TDQEIPGSAAISQMEVEAPAVTDVTDSGITISGGG--GLHAA 324

Query: 258 VEEEEEEEEAMVAEIRSVDE----------------------KPLEIDGQTHC--TFENV 317
           +++EE      +AEIRS+ E                      K +E+ G        +NV
Sbjct: 325 MDDEE------MAEIRSIGEQHQMEWNDTMNLVTSAWWFKFLKTMELGGPEGKPEDDDNV 384

Query: 318 PTGQSEEAMEFPDWLSINDDFLQPRSNYQFSNEDYLQDPDLSCMDIGEIEDVDGDWLA 321
                +EAMEFP WL+ N+   Q R N  +S EDY QDP L CMDIGEIE +DG+WLA
Sbjct: 385 WYHPFDEAMEFPAWLNANESCFQHRLNDYYS-EDYFQDPALPCMDIGEIEGIDGEWLA 426

The following BLAST results are available for this feature:

BLAST of CmoCh01G017420 vs. Swiss-Prot


Match Name	E-value	Identity	Description

BLAST of CmoCh01G017420 vs. TrEMBL


Match Name	E-value	Identity	Description
A0A0A0L091_CUCSA	9.7e-62	59.85	Uncharacterized protein OS=Cucumis sativus GN=Csa_4G649650 PE=4 SV=1	[more]
M5XIW4_PRUPE	3.0e-39	39.34	Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa025477mg PE=4 SV=1	[more]
A0A067G299_CITSI	3.7e-37	38.04	Uncharacterized protein OS=Citrus sinensis GN=CISIN_1g046333mg PE=4 SV=1	[more]
V4UUB5_9ROSI	5.4e-36	37.32	Uncharacterized protein OS=Citrus clementina GN=CICLE_v10008490mg PE=4 SV=1	[more]
A0A061GLU2_THECC	7.7e-35	38.24	Hydroxyproline-rich glycoprotein family protein OS=Theobroma cacao GN=TCM_037421...	[more]

BLAST of CmoCh01G017420 vs. TAIR10


Match Name	E-value	Identity	Description
AT5G21280.1	1.0e-17	32.27	hydroxyproline-rich glycoprotein family protein	[more]

BLAST of CmoCh01G017420 vs. NCBI nr


Match Name	E-value	Identity	Description
gi\|659104088\|ref\|XP_008452804.1\|	1.1e-63	56.29	PREDICTED: uncharacterized protein LOC103493717 [Cucumis melo]	[more]
gi\|700200237\|gb\|KGN55395.1\|	1.4e-61	59.85	hypothetical protein Csa_4G649650 [Cucumis sativus]	[more]
gi\|694356596\|ref\|XP_009359049.1\|	6.7e-40	37.13	PREDICTED: uncharacterized protein LOC103949662 [Pyrus x bretschneideri]	[more]
gi\|596252667\|ref\|XP_007224690.1\|	4.4e-39	39.34	hypothetical protein PRUPE_ppa025477mg [Prunus persica]	[more]
gi\|645227611\|ref\|XP_008220604.1\|	4.8e-38	40.22	PREDICTED: protein similar [Prunus mume]	[more]

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **INTERPRO**
Term	Definition

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0008150	biological_process
cellular_component	GO:0005575	cellular_component
molecular_function	GO:0003674	molecular_function

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CmoCh01G017420.1	CmoCh01G017420.1	mRNA

InterPro

Analysis Name: InterPro Annotations of Cucurbita moschata
Date Performed: 2017-05-19


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	unknown	Coil	Coil	coord: 227..247 scor
None	No IPR available	PANTHER	PTHR37256	FAMILY NOT NAMED	coord: 19..320 score: 2.6

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
CmoCh01G017420	Cucsa.271210	Cucumber (Gy14) v1	cgycmoB0748
CmoCh01G017420	CmaCh09G003810	Cucurbita maxima (Rimu)	cmacmoB050
CmoCh01G017420	CmaCh01G016890	Cucurbita maxima (Rimu)	cmacmoB468
CmoCh01G017420	Cla002288	Watermelon (97103) v1	cmowmB424
CmoCh01G017420	Csa4G649650	Cucumber (Chinese Long) v2	cmocuB463
CmoCh01G017420	MELO3C016931	Melon (DHL92) v3.5.1	cmomeB424
CmoCh01G017420	ClCG05G015950	Watermelon (Charleston Gray)	cmowcgB413
CmoCh01G017420	CSPI04G25900	Wild cucumber (PI 183967)	cmocpiB467
CmoCh01G017420	Lsi04G013690	Bottle gourd (USVL1VR-Ls)	cmolsiB416
CmoCh01G017420	Cp4.1LG02g05700	Cucurbita pepo (Zucchini)	cmocpeB448
CmoCh01G017420	MELO3C016931.2	Melon (DHL92) v3.6.1	cmomedB488
CmoCh01G017420	CsaV3_4G036220	Cucumber (Chinese Long) v3	cmocucB0553
CmoCh01G017420	Cla97C05G096920	Watermelon (97103) v2	cmowmbB462
CmoCh01G017420	Bhi09G002515	Wax gourd	cmowgoB0601
CmoCh01G017420	Carg10733	Silver-seed gourd	carcmoB1045

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:


Gene	Organism	Block
CmoCh01G017420	Cucurbita moschata (Rifu)	cmocmoB020
CmoCh01G017420	Watermelon (97103) v1	cmowmB435
CmoCh01G017420	Cucurbita pepo (Zucchini)	cmocpeB467
CmoCh01G017420	Cucumber (Gy14) v2	cgybcmoB486
CmoCh01G017420	Silver-seed gourd	carcmoB0874