Cp4.1LG05g05370 (gene) Cucurbita pepo (Zucchini)
The following sequences are available for this feature:
Legend: five_prime_UTRCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.CGACAAGAGGGAGACCTTAGTCATTCGGGCGGCAAGATTTGGGGGCAGAGAGAGAGAGAGAGCAATGGAGCCGTTCGTGAATGCGTTCTCAGTATTGGAGCTCGATGCTGAAGACGATCAAGTTCGTCCTCCTTCTACTTTCTCCAAAGACGAGGCTGCCGCTTCTTCCTCTTCAAGAACAGGTTGATTTAGTTATGATGCGATTTAGGGTGTTCTTCTCGTTATCAAGTGTCACATTTTACAGGTGCAAGGTTGAAGGTTCTGAGAACTTCAGGAGTTCGATTAGATTAGATTACCTTCCCCGTTGATCGCTTAGAGTGCATTAAGAATTAGGTTCAGGTAGTTTCTTCGGAAAATTGAAGTGATACAATAAGAATCGATTGTTCTGTTTGCCCAGTTTTGAGTTCCGCGGCATTGTGGACATTAACAAGGCTGAAGATTTGATTCTATCTTCGACTTCTGAATTTAAGCTGCCAATTTGAGCTTTCGACTCAATAATAATTGAAAAAATTGGCTTTTAGGAAACGATGTAGCTTTACGATCAGGCTTTTCATTGTCACTTGTTGTGTCGTTGATGTAGATTAGACCCCCGAGACCCCACGACATGGTAGTTGTGGGTTTCGTTACTTCCTGGTTTTACGCAATGCATTACACGGTAGCTTTGTTCAATTTCAAGCTTGGAATGATGCTATTGTTTTGCAATTTGATATGTTAAGTTTTACCCTTATGTCTCTGATGAAATTGTTCATTTTTTTGGGTCAGTATTTTCCTGCGATTATTCCTTGTTGATCCCCCACGGCAGACATGGATATTTCATCGATATTTCGCACATAATACGTAGTTATTTTTCTTGATTTTTCTCCCTGTTGGTTTTTTACTGAATTAATCTTTCAAGCAATATATGTTGTAGTAATCCATCTTCTTAGTATGGATATTACCATTGACGTTTCATGCATAGTGAATAGGATACAGTTCTTTTAAGTGTGGTTAACGGTTGTGGGTATTTATTTTTCTATTGTAAATTCCTCCCATCTAATCCTTGAAAAAAAGTAGAACATGACCCTGTGGTGTGGTTTGATTAATTGAATCAGGAAAAAGCAAGAAGGAAAACATCTCTGGTGATATTCTGATGGGAGAAAGACAGAAACAAAGTCAACCAGATGTAGCTGCAGAAGACTACAAGTTTCCACTTGTTTGGATTGACCTGGAAATGACTGGTAACTAACAAGTATTAACTAGCCCATATGCTTTAAGCTTGTAAAACGTGGATTGAAGAGTGGGAGTAGATTATAGCTATAAGAAACCCCCTCGTTTTGGGGTTTTATCATTAAATATTGAAATCAAGTCCAACGGAATTTAAAAATTTATATTTGCCCGGGGTTGAATGGACTGGATATTCAACATATTACCTATAATTTTTTTTTTCTGTTACTTTTTAATGGAAGTGTTTGCTCCTTACAATTCTTTTGTCTTCTTCTGTGGCAATGGGATGACTTATTTTTCTGTAACTTTCTCCACACACACCCTAAAAAGAAAAAAAAGAAAAGAAGAAAAAGAAACTATAACCCTTCTAGCTTCCTCAAAACATATATCCTATGGTTTCTCTTTATGGAAATAAGAATATATCCTATGGTTTTTCTTTATTGAGAAGATAGATTCTATAAGTTTAAGTGAAGGCCAAGACAGGCTGGGGTGGGTGAATAATCCCATGGGAGACATCACCACCAGATCGACTTTTCTCCATATTGCAAAGAAAAGTCACAGACTGAAAGCTCATATGGTGAGAAAACACGGTTGAAAAGCTCTAGAAATAGTTCCCAAATTGATCTTTGCCCCCTTGGGTTGTAGCTTATGTCTAAAACAGATGGAATCCTTATATCATATTTTCCTTCACAACCCATATGCTTCTAATGGTTGGATTTGGTTGTTGGGAGAGTTTGGTTTGTCCTACTGCTTATTGAACAGAAATGACAATTGGCTGGTAGAATGTTTGACTGGTAGTTGTTTTAAGAACCGGGCTAATATTTTGTGGCAATGTGCAGTTAGAGCCTTTGTCTTGCTGCTGTGGTTATATCATAGGGTTGTTAGTCCCACGTTCTTAGCAATGTGGAAGCCAAAATTCTTGTTAGACTTGAGTTTGACACTATTTACCATTCCATGCAACATCTTTGGCTAGAAAAGAAGGCCTAATCATTGTTGGTTGATAATATCCTGGCTATTTGAAAAGATGACGAGAGCAGCCTATAAAACATTTGGGATGGGGAATTAAAGATTAATGCCTCTAACAGGGCTTTCTTTCCAAAGAATTTTAAAACTGTTCATTTGTGTGTGCTAATGTGACTGTTGAGATCTGTTTCCAATCTCTTTTTTGCCTTCTTCTCCTTAGAATTTTTATCCTCCACACTTTTGTACTTGTTTTTTAGGTCGATACCTTCCTTTACTTATTTAAGATGCTGAATTCATAATTTCTAATGGTATTTTTTCTCTGTTTGACTTACTATGCAGGTTTAAATGTAGAAACAGATAGAATACTGGAGATAGCTTGTATAATTACCAATGGAAGTCTGACCAAATTGGTTGAGGTATCTTTGCTATTGGTTATTCAATTGTGTTTTCCATGAATGCATTTGCCCCCGTTTGTTTGTGTCATTGAATTTTATGCCTTCTTTGACTTCCCTACACCATTGACAAATACTTGTCACTGTTCATCATTGGTTATCTTATTTATGTTTGTCAATAATTTCCTTTCATCAATGAAGTAACGAAAGAAACACAATATTTTCCGATAAGGTCGAACAAAATACAATGCAGTTTTGACAAGAAACCTGACTCAATATATCAGCGTCAGTCTTTGCAAATGCCTAAAACAAACAAGAGAAGTTCAAAAGTTGCAACCTTAGTCTCATCGCTTCTTTGTGTTTCGATTTCTATTTTATGTTTCCAGGGTCCTCATCTAGTTATTCACCAATCAAAAGAATGTCTTGAAAAAATGGGAGAATGGTGTCAAAGTCATCACGCAGCCAGTGGTAAGAACCAACAAGCTTAATCAATATACCACTTCATTGTATATTCATGGCTTCTGGCTTTCTGCCTTACTTTTTTTCTTGTGGATGAAACAAATTGTTATATTACACTGTCGTTATTCAGGATTGACAAAAAAAGTGCTACAAAGTACAATTAGTGAACGAGAAGCTGAAAAACAGGTGTGTAAAAATTTATCTAATGCTAGGCTCCTCCCCTCTTGATGCAATTTTTTTTTATTCGTATCCTTAATTCATAAATTTAAGTCATTTGATGTACGTATTATTGTGATAAATTTTGCGGTGCCTTGCGGCCACACAAAAAATAATCATAAATACAGATAGGTCAAGAATCCTGCAATGAATGAACTTGGTAACTTATAATAATAAACAACATAAAAAATAAGCGTTTCTTGTCTATAATCTGGTTTTAATGATAATGACAACGTTAATTTGAATCTTTATTTCATCTTCTTCATAATACCATCATCTCCCAGACCTTAGTTTGAAGGTCTTACTTCATGTTTAAGCACAGATGCACATTAGTTGTACAAGGGAGGGAAAGCACCCCACAACCAGGCGGTTATTAGAAGGCTTCCCACTAGTTAATTATAGGGGGAAAAAAAGTTTGACCAGCTGCCTCAAAATAATAATAATAGATAAATAAAATACAAGTGTGTGCAAAAATGCTTGGATCCTATAGCTCATCCCTTAGCGTATCATTCCTTTGGATTACTACTCTATTTTCTCAATCCAAAGATTTCTAAGAACTATACAGACACCACCCACGCTCTCATTTTAAAATTATGATGAGGAAGAGTAGACTGACGAAGTCTTCCTTTATGAGAAACCAACTATCATTACTGACTGACAATCCATACATCCTTAATGGTTTTGTTTTTACGATGAAGAAAATCCATCAATTTCTGCAACATAGCTGCTAGGGAAACAATTCCATCCAGCAATCCTCCGAAACCAGATCATAGAGCCATGTCCAATAGACATTTTTCTAAGGATGTAGTTGAATGATCTTGGTTGAAAACAAAGTCAACGGCTTTTGAAAGATCTGTAACTATACTTTTTAGTGATTACCAACAGTATCATAAATGTGTATGTAATNTTTTTTTTTTTTTTTTTTTTTTTTTTTTGCTCAAATTTTATGCAATAACATTTGTAATTTGCAGGTTATAGAATTTGTGAAGAAACATGTTGGTAGCTATACTCTACATTTGGCTGGAAATTCAGTCTATGTGGATTTTATTTTTTTGAAGGTAGTCCCACAGCAATATTCTTTATTTTCTCACAATTTAACGTAATTGTATCTTTGGTTTGAATTAATTTATTGTGTTATATAAAGTAAACGTCTGAGTTTAGTCAATATGTCAATATACATTTTTATATAATTTATTTATGCACTCAACTGTTTCTTGTCTTTTTGGGGCTTGCATTTGATGCTTTCTCCTGGGTTATCTGTTCTTTAGAATCTTTTTGTTGCTTTCACTGTCCTAAATAAAGGTCGTGTTATCTTGAAAATGAAAATTGTTTATTATTTAATATTCAATGATATCTTCACTTTAGTAAGTTTTACATGTGTGATATGTCTAATTTATTTGCATTATTGAATAAGCTTAATGGTTTTCGTTGATATGTGGTTATATTTTCCACCCCTTTTGAGAACAAATACTGGTTTGCAATGTCTTTCGTCCTAACGACCTGTTTTATTCCCTTCAGAAATACATGCCAGATTTGGCTGGACTTTTTTCGCACGTACTTGTTGACGTCAGTAGTGTTAAGGCTCTATGCTTTCGCTGGTTTCCAAGAGGTAAAAAGATGTTGATGGTTTTAGAGCAAAATGACAAGCATGCTGTTCTTAATTCTCTGTTTCATATTAAAAATAAGAAACACATTATTTCCTTGCACTTGTTCCTCTGTAATTGCAAACCTCGACCAGTATTCTTGTTCAAATTAGAAACCCTTTATGTCAATTGCGACTAAATTGATCACGTTACTTATTGTCTCATGGGATTCCGAGTTAATAGCCATCTAAATATCATCTCTGAAAGATATTTAGGAGGCTTGTTAGATTTTAGTGGCATTACACTCTTCGATCAAACATTTACTTGATTCATAGGACGATTGTGCCAACTTGAGAATAGAACTGACATAAAATATATTTGATCATTGGGTCAGAAGTATGAATCTCCCATCCTATATTTTTTTCTAAAAAGAAAACAGGAACAATCGTTTTGAGAATTTTAATGGAAATCTCGCAGCTGCTTATGATGTCTTAGGAATCTGTAGCCTTTTTGTAGACTGTTGATCAATAAAACCAAACATAGACTCACCTTGCAACATTTGGTTATTGAATTACTTGAGCATACATCAACAACTCATTTCCTTTCCAGATCAGAAGAAAGCTCCACCGAAGGAGAATAAACATAGGGCTATGGATGATATCAGAGAAAGCATAATGGAACTCAAATACTACAAGGAAAATATATTTAAGAAGCCTAAAAAGTGACGCAGGAGGAGGAGGAGGCACCACAACCACAAGACTACATGTCTGTACGGTACGCGGAGGTTTTACTTTAAAATTCCAATCTACCATTCATCTCCTTGTTCAATTGTATATGATGAAAGCTCTTTAGCTGAAACAGTTATCTAAATCTATCTATTATTTGATTGTAGTTGCTGGATTCATTGCTTGGAGAGCCTTCATGGTATCAAATACATTGTGTTGATTGATTAACTGCTTGCTGGATTCATTGCTTGGAGAGCCTCCATGGTATCTAATACATTGTGTTCATTAACTGCTTTCAAATCCAAACATACTTGCGGATCCAAGAGTTTGTAGATCATCTATGTTAGAATTTATTTTCTTTATATTCTATTGGGTATATATAATTTAATCTTTTATCTATTTGAAATGGTCACTTGTTCGATGCCATTACTATATGTTTCTATAAACTATTTTTTTCTCCGTGTTATCTTGTATATAGCTCAACTCGTTAAAAAATTGATATCTCTTTGAACGAATAG CGACAAGAGGGAGACCTTAGTCATTCGGGCGGCAAGATTTGGGGGCAGAGAGAGAGAGAGAGCAATGGAGCCGTTCGTGAATGCGTTCTCAGTATTGGAGCTCGATGCTGAAGACGATCAAGTTCGTCCTCCTTCTACTTTCTCCAAAGACGAGGCTGCCGCTTCTTCCTCTTCAAGAACAGGAAAAAGCAAGAAGGAAAACATCTCTGGTGATATTCTGATGGGAGAAAGACAGAAACAAAGTCAACCAGATGTAGCTGCAGAAGACTACAAGTTTCCACTTGTTTGGATTGACCTGGAAATGACTGGTTTAAATGTAGAAACAGATAGAATACTGGAGATAGCTTGTATAATTACCAATGGAAGTCTGACCAAATTGGTTGAGGGTCCTCATCTAGTTATTCACCAATCAAAAGAATGTCTTGAAAAAATGGGAGAATGGTGTCAAAGTCATCACGCAGCCAGTGGATTGACAAAAAAAGTGCTACAAAGTACAATTAGTGAACGAGAAGCTGAAAAACAGGTTATAGAATTTGTGAAGAAACATGTTGGTAGCTATACTCTACATTTGGCTGGAAATTCAGTCTATGTGGATTTTATTTTTTTGAAGAAATACATGCCAGATTTGGCTGGACTTTTTTCGCACGTACTTGTTGACGTCAGTAGTGTTAAGGCTCTATGCTTTCGCTGGTTTCCAAGAGATCAGAAGAAAGCTCCACCGAAGGAGAATAAACATAGGGCTATGGATGATATCAGAGAAAGCATAATGGAACTCAAATACTACAAGGAAAATATATTTAAGAAGCCTAAAAAGTGACGCAGGAGGAGGAGGAGGCACCACAACCACAAGACTACATGTCTGTACGTTGCTGGATTCATTGCTTGGAGAGCCTTCATGGTATCAAATACATTGTGTTGATTGATTAACTGCTTGCTGGATTCATTGCTTGGAGAGCCTCCATGGTATCTAATACATTGTGTTCATTAACTGCTTTCAAATCCAAACATACTTGCGGATCCAAGAGTTTGTAGATCATCTATGTTAGAATTTATTTTCTTTATATTCTATTGGGTATATATAATTTAATCTTTTATCTATTTGAAATGGTCACTTGTTCGATGCCATTACTATATGTTTCTATAAACTATTTTTTTCTCCGTGTTATCTTGTATATAGCTCAACTCGTTAAAAAATTGATATCTCTTTGAACGAATAG ATGGAGCCGTTCGTGAATGCGTTCTCAGTATTGGAGCTCGATGCTGAAGACGATCAAGTTCGTCCTCCTTCTACTTTCTCCAAAGACGAGGCTGCCGCTTCTTCCTCTTCAAGAACAGGAAAAAGCAAGAAGGAAAACATCTCTGGTGATATTCTGATGGGAGAAAGACAGAAACAAAGTCAACCAGATGTAGCTGCAGAAGACTACAAGTTTCCACTTGTTTGGATTGACCTGGAAATGACTGGTTTAAATGTAGAAACAGATAGAATACTGGAGATAGCTTGTATAATTACCAATGGAAGTCTGACCAAATTGGTTGAGGGTCCTCATCTAGTTATTCACCAATCAAAAGAATGTCTTGAAAAAATGGGAGAATGGTGTCAAAGTCATCACGCAGCCAGTGGATTGACAAAAAAAGTGCTACAAAGTACAATTAGTGAACGAGAAGCTGAAAAACAGGTTATAGAATTTGTGAAGAAACATGTTGGTAGCTATACTCTACATTTGGCTGGAAATTCAGTCTATGTGGATTTTATTTTTTTGAAGAAATACATGCCAGATTTGGCTGGACTTTTTTCGCACGTACTTGTTGACGTCAGTAGTGTTAAGGCTCTATGCTTTCGCTGGTTTCCAAGAGATCAGAAGAAAGCTCCACCGAAGGAGAATAAACATAGGGCTATGGATGATATCAGAGAAAGCATAATGGAACTCAAATACTACAAGGAAAATATATTTAAGAAGCCTAAAAAGTGA MEPFVNAFSVLELDAEDDQVRPPSTFSKDEAAASSSSRTGKSKKENISGDILMGERQKQSQPDVAAEDYKFPLVWIDLEMTGLNVETDRILEIACIITNGSLTKLVEGPHLVIHQSKECLEKMGEWCQSHHAASGLTKKVLQSTISEREAEKQVIEFVKKHVGSYTLHLAGNSVYVDFIFLKKYMPDLAGLFSHVLVDVSSVKALCFRWFPRDQKKAPPKENKHRAMDDIRESIMELKYYKENIFKKPKK
BLAST of Cp4.1LG05g05370 vs. Swiss-Prot
Match: ORN_ARATH (Oligoribonuclease OS=Arabidopsis thaliana GN=At2g26970 PE=2 SV=2) HSP 1 Score: 296.6 bits (758), Expect = 2.6e-79 Identity = 157/246 (63.82%), Postives = 185/246 (75.20%), Query Frame = 1
BLAST of Cp4.1LG05g05370 vs. Swiss-Prot
Match: ORN_HUMAN (Oligoribonuclease, mitochondrial OS=Homo sapiens GN=REXO2 PE=1 SV=3) HSP 1 Score: 187.2 bits (474), Expect = 2.2e-46 Identity = 90/183 (49.18%), Postives = 124/183 (67.76%), Query Frame = 1
BLAST of Cp4.1LG05g05370 vs. Swiss-Prot
Match: ORN_MOUSE (Oligoribonuclease, mitochondrial OS=Mus musculus GN=Rexo2 PE=1 SV=2) HSP 1 Score: 187.2 bits (474), Expect = 2.2e-46 Identity = 89/183 (48.63%), Postives = 124/183 (67.76%), Query Frame = 1
BLAST of Cp4.1LG05g05370 vs. Swiss-Prot
Match: ORN_RAT (Oligoribonuclease, mitochondrial OS=Rattus norvegicus GN=Rexo2 PE=2 SV=1) HSP 1 Score: 187.2 bits (474), Expect = 2.2e-46 Identity = 89/183 (48.63%), Postives = 124/183 (67.76%), Query Frame = 1
BLAST of Cp4.1LG05g05370 vs. Swiss-Prot
Match: ORN_BOVIN (Oligoribonuclease, mitochondrial OS=Bos taurus GN=REXO2 PE=2 SV=1) HSP 1 Score: 186.8 bits (473), Expect = 2.9e-46 Identity = 89/183 (48.63%), Postives = 124/183 (67.76%), Query Frame = 1
BLAST of Cp4.1LG05g05370 vs. TrEMBL
Match: A0A0A0KZ28_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_4G279830 PE=4 SV=1) HSP 1 Score: 418.7 bits (1075), Expect = 5.0e-114 Identity = 213/251 (84.86%), Postives = 227/251 (90.44%), Query Frame = 1
BLAST of Cp4.1LG05g05370 vs. TrEMBL
Match: A0A067KFX9_JATCU (Uncharacterized protein OS=Jatropha curcas GN=JCGZ_10670 PE=4 SV=1) HSP 1 Score: 346.7 bits (888), Expect = 2.4e-92 Identity = 177/256 (69.14%), Postives = 209/256 (81.64%), Query Frame = 1
BLAST of Cp4.1LG05g05370 vs. TrEMBL
Match: M5X808_PRUPE (Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa010434mg PE=4 SV=1) HSP 1 Score: 346.7 bits (888), Expect = 2.4e-92 Identity = 184/252 (73.02%), Postives = 204/252 (80.95%), Query Frame = 1
BLAST of Cp4.1LG05g05370 vs. TrEMBL
Match: W9RGV3_9ROSA (Uncharacterized protein OS=Morus notabilis GN=L484_022507 PE=4 SV=1) HSP 1 Score: 346.3 bits (887), Expect = 3.2e-92 Identity = 180/251 (71.71%), Postives = 202/251 (80.48%), Query Frame = 1
BLAST of Cp4.1LG05g05370 vs. TrEMBL
Match: A0A0D2RR44_GOSRA (Uncharacterized protein OS=Gossypium raimondii GN=B456_004G001600 PE=4 SV=1) HSP 1 Score: 342.4 bits (877), Expect = 4.6e-91 Identity = 174/250 (69.60%), Postives = 203/250 (81.20%), Query Frame = 1
BLAST of Cp4.1LG05g05370 vs. TAIR10
Match: AT2G26970.1 (AT2G26970.1 Polynucleotidyl transferase, ribonuclease H-like superfamily protein) HSP 1 Score: 296.6 bits (758), Expect = 1.4e-80 Identity = 157/246 (63.82%), Postives = 185/246 (75.20%), Query Frame = 1
BLAST of Cp4.1LG05g05370 vs. NCBI nr
Match: gi|659097843|ref|XP_008449843.1| (PREDICTED: oligoribonuclease [Cucumis melo]) HSP 1 Score: 419.1 bits (1076), Expect = 5.5e-114 Identity = 216/250 (86.40%), Postives = 225/250 (90.00%), Query Frame = 1
BLAST of Cp4.1LG05g05370 vs. NCBI nr
Match: gi|449448848|ref|XP_004142177.1| (PREDICTED: oligoribonuclease [Cucumis sativus]) HSP 1 Score: 418.7 bits (1075), Expect = 7.2e-114 Identity = 213/251 (84.86%), Postives = 227/251 (90.44%), Query Frame = 1
BLAST of Cp4.1LG05g05370 vs. NCBI nr
Match: gi|645251547|ref|XP_008231733.1| (PREDICTED: oligoribonuclease [Prunus mume]) HSP 1 Score: 352.4 bits (903), Expect = 6.3e-94 Identity = 182/252 (72.22%), Postives = 206/252 (81.75%), Query Frame = 1
BLAST of Cp4.1LG05g05370 vs. NCBI nr
Match: gi|596058227|ref|XP_007221003.1| (hypothetical protein PRUPE_ppa010434mg [Prunus persica]) HSP 1 Score: 346.7 bits (888), Expect = 3.5e-92 Identity = 184/252 (73.02%), Postives = 204/252 (80.95%), Query Frame = 1
BLAST of Cp4.1LG05g05370 vs. NCBI nr
Match: gi|802616771|ref|XP_012075386.1| (PREDICTED: oligoribonuclease [Jatropha curcas]) HSP 1 Score: 346.7 bits (888), Expect = 3.5e-92 Identity = 177/256 (69.14%), Postives = 209/256 (81.64%), Query Frame = 1
The following BLAST results are available for this feature:
The following terms have been associated with this gene:
GO Assignments
This gene is annotated with the following GO terms.
The following mRNA feature(s) are a part of this gene:
Analysis Name: InterPro Annotations of Cucurbita pepo
Date Performed: 2017-12-02
The following gene(s) are orthologous to this gene:
The following gene(s) are paralogous to this gene: None The following block(s) are covering this gene:
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