Cucsa.153050 (gene) Cucumber (Gy14) v1 | Cucurbit Genomics Database (CuGenDB)

Overview


Name	Cucsa.153050
Type	gene
Organism	Cucumis sativus (Cucumber (Gy14) v1)
Description	Oligoribonuclease
Location	scaffold01124 : 284961 .. 292108 (-)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

ACTGAAAATTGGATTTGACGGGGAAGGTGAAGTTGGTGGCGGCAAGACTTTGGGGGAGAGAGAGAGAGAGCGAGCGATGGCGATGAAACCACTTGTGAACGCGTTTTCATTGTTGGAGCTCGACGCTGAAGACGATCAAATTCCCGCTCTTTCTACTTCCTCCAAAGATGACGCTACTGTTTCTTACCCTTCACCAACAGGTTCACTTCTAACCTGATTTAACCTCTTCTTCTTCTTCTTCTTCTTAACTCTCATGTTTTACAACTACAAGGTTGAAGATTATGAGAACTTCAGGAATCCGTTGATAGGGATTAGACCCAGATAGTCTCTCCAGCTGTATTAGAATTTGAAACTATTCTTGTTTGTTTGTTTGTGCCTGCTTGCCTGGTTTTGATTTCTACGGCTTCCTGGATATTCACAAGGCAGAAACCCCATGAATCTAGGCTGCCAAACTAATTGAAACAGTGTATTGGCATATAAGATAGTTTCTTTATGTACTATACTCTTAGTTTCTTCACTTAATATTTAGTTATTTTCTTACTTGGTTTTTCTCATTGTTGGTTTTGTGATAAATTAATCCTTCACAGAGATGTATATTGTAATAATCCATCTTCTTTTATGGATAACACCATTGACGTTTCATGTACAGTGAGTAGGATACATTACTTAGTTGTTAGAATGGTTGATGGTCCTGAGAATTTCTTTTTCTATAGAAGATCCACTGCCTTTTAATCCTTGACACTGTTGTTTGACTAATGGATCAGGAAAAAGAAAGAAGGAAGTTAATATATCTGGTGATATTCTGACGGGAGAAAGACAGAAACAAGGTCAACCAAATGCAGTTGCAGAAGACTACAAGTTTCCTCTTGTTTGGATTGACTTGGAAATGACTGGTACTTAACAACTATTGCTAATCGCTAAGCTTTATACTTGTATAACATGGATTCAGGAGTGAGAGGGGATTATAAGAAACTCACTTTTCCTGTTTTCTTTGCTAGGTTGCAGCCTCCTTTTATTAATTTTTATTTTTTATGCCTTGTGTTCTTCATTTTTTTTTTCAATATAAGGTCAGTTATTCATCATGTTTCTAAATTCTACACTGTGATAATGCCTAAGCCTATACTCGATGGCACTGTTTATCAGGGGAGGCTTTTGGAGTTTTATGATTACATTTATCTTCACCCAGGGTTGAACAGAGTTGATATTCAACTTATCGTTTATAAGTTTTTATTACTCTTTTTTTGTGCAAAATTTTTCTCCATACATTTCTTTTAGTTTTCCTTTGTGCCAATGACATTGACTTCATTTTTTTTTCTTTTTGGTAATTTCATACTTCAATGAAGCTGTCTATCCCACCCCCTCCCCAAAAGAGAAAAAAAAAAATCAAAATCAAAATATAACCACTATAACTTGCAAGGTTGGTTTTTCTGTGTCTGCCACACTCAAGGCTTTGGGGCAAAAGAAATTGCAACCAACAAAAGTGATCATTTAGCAGCATCTATATTTTTGTTCAAGCTTATCTCTACTATCTAGTAGGTGAAGTTATGTTCGAGTTAAACTACATGCATGCTTTTCTTTTCTTTTCTTTTATTTATTTATTTGTTTTTTTTTTTAATGCATTTTCTGACATCCCAAATAAATAAGGTTTCTACTTTCTTAGTCAGGTGCAATCAAAATTCTAGTTAGACTTCTGTTAGATTCTGTTTACTATTTTATGCAACATCTTTGTCCAGAAAAGAAGGCCTATTGATTGTTGATCAATTATAAGATCTTATTTTCAAAAGACACCAGGAGCAGACTATAAAACATTTGGGATGGGGAGTTGAGAGTTAATGCCTCTAATTAGGCTTTCCTTTCCAAATAATTTTAGAACTGTCAATTTGAGTGTCTTAATGCGACTTTTGAGATCAGTTTTTGTCTTCTCCACAGTATCTTGAATTGTTGAACCCTTTTTTGGCTTATATGCAGGTTTAAATGTTGAAACAGATAGAATACTGGAGATAGCTTGTATTATTACCAATGGCAACCTGACCAAATTGGTTGAGGTATCTTTGCCATTGGCTATTCAACAGTGTTTTCCATGCATGCATTCCCCACTGTTTGTTTATGAGATTTAATTTTGTACTCTCTTTGACTTCACTACACTATTGCCAAATACTCGTCCCTGTTTATATTTGATCTGTCAATAATTTCCTTTTGTAAATAAAGTAAAGAAGAAAAATACAATATTTTTTTTTTAAGAGAGCAAACTAAATAAAATATAGGTTTGAAAAGAATCCTGACCTCTGTATGTCCCTGACACAAGTGAGAGAAGTTCAAAAGTTGCAACTTACAACCTTGATCTCATCGCTTCTTTGTGGTTTGTTATGATTTTTATGCATTCTACTTATCTTTCTAGGGTCCTGATTTAGTGATTCACCAATCAAAAGAATGTCTAGATAAAATGGGAGAATGGTGTCAAAGTCATCATGCAGCCAGTGGTAAGGACCAACAGGCTTAATCAATAGAGCACTTCATCGTATTTTAATGGCTCCTGGCTTTCTGCCTCACTTTTTTTCTTGGGGATGAAACAAATTGTGATTTATGATTTAGGATTGACAAAAAAAGTACTGCGAAGTACAATTAGTGAACGAGAAGCTGAAAAACAGGTATGTAAAAATTTATATGATGTTTTTCCTTCTCCCCTCTGAATTTTTTAATTTTTGTTACCAGGTTTTTTATTTATACTAATATATGTCGTTTGATCCTTTTTTAAAAAAATTGTGCATTCTTTCATTTTATCTTAAGAAAAGATTTATTTTGTTCTTTTGATTTTAAATTGTCATTTGACCTTTATATTATTATGATAAATTTTGGGTTTAAATCCTATTTGGTTCTTAAATTTTCAATTATGTTCTATTTTGATCTTGAAGTGTTTTGATCCCTTACTTTCAAGTAGGACCCATTTCCCACTTGCAACGAAGATTCTATTAATGGACTAACGGATTTGTGGTGTGTCTATAACCAATGGAATGAGCACGTAACACTAATTTTGACGCCAAAACCGTACCTGAATAAAAACCTAATTGATCTGTATGTGTGACGGGTCAGTTAAGCCATGTAGGAGCCTGATCATTTAAAAATATACTACAAGGCATAAATCTGTTGGCTGGCTCACTAGTAGAATCTTAGTAGGAAGAATCAAAATAGGCATTATTTAATAGCATCGAGAACAAAACAAGTGTGTTAGAAGTTTAGTGACTAAAATAGGATATGCACTTATGGTGCCATAAATGTGTGTGTAATCTGGTTGTCTGTCATTTTGGTCAAATTTAATGCCCTGACATTTGTAATTCTGCAGGTTATACAATTTGTGAAGAAACATGTTTGTACCGATAAACTACACTTGGCTGGAAATTCAGTTTATATGGATTTTATTTTTTTGAAGGTAGTCTCAAAGCAGTCTTCTTTATTTTCTCATAATATCATGCACATACAGTGTGTTAGTAGGTAAATGTTTCAGTTTAGAAATTCTTTCTCCTGCGTTATCTGTTCTTCAGCAACTTTTTGCTGCTTTCATTTTCTTAATGAAGATCATGTCACCTTAAAAATGATATTTTGTATATTACTTAACATTCAATGATACCTCATTCAGTTTACGCATGCCTGATCTATTTGCATTATTGAAAGTTTCCCCTGAATTCGCCAAGAAGAGTTTAGCTCAACTAGCATCCGAGTATTGTATTAGTAACCATGAGGTGAGGTCTGTGGTTCGAATGCCCCTACCAAGAAAAAAAAAGGTTTCTCTTGAATTCTATTAGTTAGAATTTTGAGATTTTTCTTTGTAGGATTGTGATAGGAATATTATTAGAGTATTGTAAGGGTATATTTTAGTTATTAGTTAAGGTGGTAGTTATGGTATTAGGTTATAAATAATAATGAGTGAGAAAGGTAGAGCATGCATTATTTTGGTAAGTGATTTAGGGCTTGAGACAAATCTCAAAAGAGGAAGGGTCCAAGTACCTTAAACACTTGGTTTATTTTGTAGTTTAGTTATCTTTTATGTTTCAATACCTTTGGGATCTGTTGGTGTTTCATTATTCATGTTCATATAATGTAACCAAAAATTTTCGTTGGGATATGCCATCATACCTTCTTCTCCCTTTTTCTTTTTCTATTCAATATCCTCCTCTCGGGCAGTTACAAAAGGATGCGGGAAATGCATATCAACTAGGGGAATAAAATATAGCTAGACCTAGAACCTCTGCTGAATTTCTTTTTACATAAGCTCTTGTTTCTTTCTAAGTATATTCTTAAACTAAAGCTTTTTGTGCATTGCGTCATGAAGTTTTGGTCCTTTTTTAGTTTATACCCACAAACACTTGCTTAGTATTTTTTGTATCAGAACTCTCATCACGTAATAGACTTCGATGAGGATAAGAGAAAGGCCCATGGTTGCACAGAGAGGCAATAAAAAAGAACCTTGAAATTCTGTTGCTTTCTAGCCGAGCAAATAGCAGCTGGGAATGGGATTTAGAACCAAGTTTGACATCTAGAAATCTGTTTATGTTCACTCCCACCAAGCAAAGATGACACGATGATTGACAGGAATTTCTTCTCTTGGTGCAACTTATATTCTAAATAGCATCCCTGATAGACATCCTTCAAGAAAAGGTTGGTCCCAAGAATTCTTAAAATGATGGTGCAATTGAAAAGATTCCAGATTTCAAAGCTTCCATCCCCTTTTACTCTGTTCCCTAATTTAACTGTATATTGCCCTGCAAACAGAAGTGATTTGTCCCACCCACTTATCCCAAGTCTAGATTTCTTCCAGCCAAAATATTCTATGAATCAGCGATCTTCCATAGTGTCAGCCTTCTGAGTCTTTGTTGAAGTGTTAAACTCCACCTAAGTTTCATGCCTAGAGGATGTTCAACCAACTTCCAGTTAAACTGTAGTGAATTCTCAATTTCCCCTTAAATTTAAACAATAGTCCATCCAGGATTCTGCCTGCCTACTTGATTTCCTTTCTCTGGTAAACTTACCACCTTTCCATTTCAAAACTACCAGTTGTAATTTAGTATCACGCTTGGTTTGCTAGATTGTTTCAGGAACTGCCAAAACCAGTTTATTAAAATACCTCATTCCTTCTCCTTACGGTTATAATGCTAGTTTATCATTGCATATTGGTTGTGAGATGATACTCTCCTTCTTGACTACCACCCAAATCAAAGTCTTGGACTCTTGAGTTTTCATTTCACTATCTGAGGCTGAACCACTTTTCCTTTCTATTATTTCTTTCTTCTTCTTTCATACGACCCTTCCCACGTTCACTCTTCTAACAAAACTTGGAAATTTTGCTGATTTAGCATGTAATATATTCTTTTGACGTGGTAATCTTATTGCTTCTATAATTCACCAATTTCTTAGGTAGTTGCACGTACTCTTCTTTGTTCAAAGATCTCTTATTCATCTTCTATCATGCTTTCATAAATACTGCTTTGCAGTGTTTTTTGTTCTAACGGCCTGTTTATTCCCTTCAGAAATACATGCCAGATTTGGCTGGACTTTTTTCGCATGTGCTCGTCGATGTCAGTAGTATAAAGACTCTTTGCGATCGCTGGTATCCAAGAGGTAAAGATCTTGACAACTGGAGTGTTTTCACTTTTGAGAAAAATGACGGCCATGTTATTTTGATTTTTCTGTTTCTTATTAAAAATAACAAAGGTAGACGTGTATTATTTTCTTGCAACTATTGGTATGTTATTGGAAACCTGTACAACTATTCTTGTTCAAAGAGATTGAGAAGAAACCAAAGAGATTCTGATATTGAATAATGTGGAGTTCTTATACATTGCTTGTCCACAGTCTCCTCTCCTTATCCCTTAATCCTGACAGAGGAATATGGAAACTTTGAATTGTTCTTATGGGAGTTATCACACATAACCATTAATTCTCATGAAAAGCTTCAAAGAAGATTTCCCCATTTGGTTTTGTCTCCTCAATGGTGTTGTATGTGCAAAACAATCTGAATCTCAAGGTCAACATTTGGTCTATTGTTCTTTTGCTAGATCTTTTTGAAACTACGTTCTCACTAGGTTTAATTGGCAAGCAATCCTCTTGGAAGATCCTAATCTTCTCCTGTCATATACCCTATACCCCTGGTGGCACCTCTTCAAAAAGGAGAGAAGATGATTTGGGAAAATTTTATAAGAGCCTTTGGCCCTTTGCTGGAAGTTATAACCCGAAATAAATATAATAGAAGACATTTTCAAGATAAAGAAATCCCCCTCTGTTCATTTTGTTATGCGATAGTTAATATGTTCTTTATTCACCACTACAACTTCTTTTGTAACTCATCTACAGGGGTTCTCCCCTCTTTTAATTTTATACCGTCCATGAAATTGTTTCTTTTACCTAATAATAATAATACTTGTTGCCTCATGGGGGGATTGTGAGTTCATAGCCAGCTCAATATCATCTCTGAAAGATATTGAGGAGACTTTTAAGTTTTATTAGCACTATTCTCCTGCATCAAACATTTACTTGATTCATAACAATAATAATGGTTCTTGGCCTCTAATGGAAATCTCGCAGGTGCCTATGATATGTTTAGTCTTTTTGTTGACTATCAGTATGTACGATTTACTTTATAAACCAAACATAGACTCAGCTTAGAACATTTGGTTATTCGTTTACTTGTCCATACATTAACAACCCATTTCCTTTCCAGATCGGAAGAAAGCCCCGCCAAAAGAGAATAAACACAGGGCTATGGATGATATCAGAGAAAGCATAATGGAACTCAAATATTACAAGGAAAATATATTTAAGAATTCAAAAAAGTGATGCAAGAGGAAGCACCATAACCAGAAGATTGCATGCTTGAACGGTACGGAGATTTTACTTTAAATTTCACGTCTATCATTCATCTCCTAATTCAATTGTGTATAATGTACTACTATCTTCTGTTATCGTGGATGTTCTGCTGTTAAGTGGTGGTTGGATAGACTTTTACATCTTACCACTTTGTAAAGTTTAACTCTTTAAGGTGCGTATAAATTTAATTGATGAAATATTTATTTATATCTTATCTGAAAGTTCTTTAGCTGAAATAGTTGCTGGATATATTGCTCGGAGCCTATGTAGTATGAGAAGATTTTATGCAT

mRNA sequence

ACTGAAAATTGGATTTGACGGGGAAGGTGAAGTTGGTGGCGGCAAGACTTTGGGGGAGAGAGAGAGAGAGCGAGCGATGGCGATGAAACCACTTGTGAACGCGTTTTCATTGTTGGAGCTCGACGCTGAAGACGATCAAATTCCCGCTCTTTCTACTTCCTCCAAAGATGACGCTACTGTTTCTTACCCTTCACCAACAGGAAAAAGAAAGAAGGAAGTTAATATATCTGGTGATATTCTGACGGGAGAAAGACAGAAACAAGGTCAACCAAATGCAGTTGCAGAAGACTACAAGTTTCCTCTTGTTTGGATTGACTTGGAAATGACTGGTTTAAATGTTGAAACAGATAGAATACTGGAGATAGCTTGTATTATTACCAATGGCAACCTGACCAAATTGGTTGAGGGTCCTGATTTAGTGATTCACCAATCAAAAGAATGTCTAGATAAAATGGGAGAATGGTGTCAAAGTCATCATGCAGCCAGTGGATTGACAAAAAAAGTACTGCGAAGTACAATTAGTGAACGAGAAGCTGAAAAACAGGTTATACAATTTGTGAAGAAACATGTTTGTACCGATAAACTACACTTGGCTGGAAATTCAGTTTATATGGATTTTATTTTTTTGAAGAAATACATGCCAGATTTGGCTGGACTTTTTTCGCATGTGCTCGTCGATGTCAGTAGTATAAAGACTCTTTGCGATCGCTGGTATCCAAGAGATCGGAAGAAAGCCCCGCCAAAAGAGAATAAACACAGGGCTATGGATGATATCAGAGAAAGCATAATGGAACTCAAATATTACAAGGAAAATATATTTAAGAATTCAAAAAAGTGATGCAAGAGGAAGCACCATAACCAGAAGATTGCATGCTTGAACGGTACGGAGATTTTACTTTAAATTTCACGTCTATCATTCATCTCCTAATTCAATTGTGTATAATGTACTACTATCTTCTGTTATCGTGGATGTTCTGCTGTTAAGTGGTGGTTGGATAGACTTTTACATCTTACCACTTTGTAAAGTTTAACTCTTTAAGGTGCGTATAAATTTAATTGATGAAATATTTATTTATATCTTATCTGAAAGTTCTTTAGCTGAAATAGTTGCTGGATATATTGCTCGGAGCCTATGTAGTATGAGAAGATTTTATGCAT

Coding sequence (CDS)

ATGGCGATGAAACCACTTGTGAACGCGTTTTCATTGTTGGAGCTCGACGCTGAAGACGATCAAATTCCCGCTCTTTCTACTTCCTCCAAAGATGACGCTACTGTTTCTTACCCTTCACCAACAGGAAAAAGAAAGAAGGAAGTTAATATATCTGGTGATATTCTGACGGGAGAAAGACAGAAACAAGGTCAACCAAATGCAGTTGCAGAAGACTACAAGTTTCCTCTTGTTTGGATTGACTTGGAAATGACTGGTTTAAATGTTGAAACAGATAGAATACTGGAGATAGCTTGTATTATTACCAATGGCAACCTGACCAAATTGGTTGAGGGTCCTGATTTAGTGATTCACCAATCAAAAGAATGTCTAGATAAAATGGGAGAATGGTGTCAAAGTCATCATGCAGCCAGTGGATTGACAAAAAAAGTACTGCGAAGTACAATTAGTGAACGAGAAGCTGAAAAACAGGTTATACAATTTGTGAAGAAACATGTTTGTACCGATAAACTACACTTGGCTGGAAATTCAGTTTATATGGATTTTATTTTTTTGAAGAAATACATGCCAGATTTGGCTGGACTTTTTTCGCATGTGCTCGTCGATGTCAGTAGTATAAAGACTCTTTGCGATCGCTGGTATCCAAGAGATCGGAAGAAAGCCCCGCCAAAAGAGAATAAACACAGGGCTATGGATGATATCAGAGAAAGCATAATGGAACTCAAATATTACAAGGAAAATATATTTAAGAATTCAAAAAAGTGA

Protein sequence

MAMKPLVNAFSLLELDAEDDQIPALSTSSKDDATVSYPSPTGKRKKEVNISGDILTGERQKQGQPNAVAEDYKFPLVWIDLEMTGLNVETDRILEIACIITNGNLTKLVEGPDLVIHQSKECLDKMGEWCQSHHAASGLTKKVLRSTISEREAEKQVIQFVKKHVCTDKLHLAGNSVYMDFIFLKKYMPDLAGLFSHVLVDVSSIKTLCDRWYPRDRKKAPPKENKHRAMDDIRESIMELKYYKENIFKNSKK*

Homology

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BLAST of Cucsa.153050 vs. Swiss-Prot
Match: ORN_ARATH (Oligoribonuclease OS=Arabidopsis thaliana GN=At2g26970 PE=2 SV=2)

HSP 1 Score: 293.1 bits (749), Expect = 2.9e-78
Identity = 155/247 (62.75%), Postives = 183/247 (74.09%), Query Frame = 1


Query: 3   MKPLVNAFSLLELDAEDDQIPALSTSSKDDATVSYPSPTGKRKKEVNISGDILTGERQKQ 62
           M  L NAFS+L    ED   P  S+SS           TGK+++ VN  G +  G     
Sbjct: 1   MNKLSNAFSVLAFADED--APMASSSS-----------TGKQEESVN--GSLEDG----- 60

Query: 63  GQPNAVAEDYKFPLVWIDLEMTGLNVETDRILEIACIITNGNLTKLVEGPDLVIHQSKEC 122
                   DYK PLVWIDLEMTGLNVE DRILEIACIITNG+LT+ VEGPDLV+ Q+K+C
Sbjct: 61  --------DYKQPLVWIDLEMTGLNVEVDRILEIACIITNGDLTQSVEGPDLVVRQTKDC 120

Query: 123 LDKMGEWCQSHHAASGLTKKVLRSTISEREAEKQVIQFVKKHVCTDKLHLAGNSVYMDFI 182
           LDKM +WCQ+HH ASGLTKKVL S I+EREAE++VI+FVKKHV +    LAGNSVY+DF+
Sbjct: 121 LDKMDDWCQTHHGASGLTKKVLLSAITEREAEQKVIEFVKKHVGSGNPLLAGNSVYVDFL 180

Query: 183 FLKKYMPDLAGLFSHVLVDVSSIKTLCDRWYPRDRKKAPPKENKHRAMDDIRESIMELKY 242
           FLKKYMP+LA LF H+LVDVSS+K LC RW+P +R+KAP K+N HRAMDDIRESI ELKY
Sbjct: 181 FLKKYMPELAALFPHILVDVSSVKALCARWFPIERRKAPAKKNNHRAMDDIRESIKELKY 219

Query: 243 YKENIFK 250
           YK+ IFK
Sbjct: 241 YKKTIFK 219

[Close]

BLAST of Cucsa.153050 vs. Swiss-Prot
Match: ORN_HUMAN (Oligoribonuclease, mitochondrial OS=Homo sapiens GN=REXO2 PE=1 SV=3)

HSP 1 Score: 188.7 bits (478), Expect = 7.7e-47
Identity = 91/187 (48.66%), Postives = 124/187 (66.31%), Query Frame = 1


Query: 63  GQPNAVAEDYKFPLVWIDLEMTGLNVETDRILEIACIITNGNLTKLVEGPDLVIHQSKEC 122
           G   A  E     +VW+DLEMTGL++E D+I+E+AC+IT+ +L  L EGP+L+I Q  E 
Sbjct: 30  GAAMAAGESMAQRMVWVDLEMTGLDIEKDQIIEMACLITDSDLNILAEGPNLIIKQPDEL 89

Query: 123 LDKMGEWCQSHHAASGLTKKVLRSTISEREAEKQVIQFVKKHVCTDKLHLAGNSVYMDFI 182
           LD M +WC+ HH  SGLTK V  STI+ ++AE + + FV++        LAGNSV+ D  
Sbjct: 90  LDSMSDWCKEHHGKSGLTKAVKESTITLQQAEYEFLSFVRQQTPPGLCPLAGNSVHEDKK 149

Query: 183 FLKKYMPDLAGLFSHVLVDVSSIKTLCDRWYPRDRKKAPPKENKHRAMDDIRESIMELKY 242
           FL KYMP       + ++DVS++K LC RWYP + + AP K   HRA+DDI ESI EL++
Sbjct: 150 FLDKYMPQFMKHLHYRIIDVSTVKELCRRWYPEEYEFAPKKAASHRALDDISESIKELQF 209

Query: 243 YKENIFK 250
           Y+ NIFK
Sbjct: 210 YRNNIFK 216

[Close]

BLAST of Cucsa.153050 vs. Swiss-Prot
Match: ORN_BOVIN (Oligoribonuclease, mitochondrial OS=Bos taurus GN=REXO2 PE=2 SV=1)

HSP 1 Score: 188.0 bits (476), Expect = 1.3e-46
Identity = 90/187 (48.13%), Postives = 124/187 (66.31%), Query Frame = 1


Query: 63  GQPNAVAEDYKFPLVWIDLEMTGLNVETDRILEIACIITNGNLTKLVEGPDLVIHQSKEC 122
           G   A  E     +VW+DLEMTGL++E D+I+E+AC+IT+ +L  L EGP+L+I Q  E 
Sbjct: 30  GAAMAAGESMAQRMVWVDLEMTGLDIEKDQIIEMACLITDSDLNILAEGPNLIIKQPDEL 89

Query: 123 LDKMGEWCQSHHAASGLTKKVLRSTISEREAEKQVIQFVKKHVCTDKLHLAGNSVYMDFI 182
           LD M +WC+ HH  SGLTK V  ST++ ++AE + + FV++        LAGNSV+ D  
Sbjct: 90  LDSMSDWCKEHHGKSGLTKAVKESTMTLQQAEYEFLSFVRQQTPPGLCPLAGNSVHADKK 149

Query: 183 FLKKYMPDLAGLFSHVLVDVSSIKTLCDRWYPRDRKKAPPKENKHRAMDDIRESIMELKY 242
           FL KYMP       + ++DVS++K LC RWYP + + AP K   HRA+DDI ESI EL++
Sbjct: 150 FLDKYMPQFMKHLHYRIIDVSTVKELCRRWYPEEYEFAPKKAASHRALDDISESIKELQF 209

Query: 243 YKENIFK 250
           Y+ NIFK
Sbjct: 210 YRNNIFK 216

[Close]

BLAST of Cucsa.153050 vs. Swiss-Prot
Match: ORN_RAT (Oligoribonuclease, mitochondrial OS=Rattus norvegicus GN=Rexo2 PE=2 SV=1)

HSP 1 Score: 187.6 bits (475), Expect = 1.7e-46
Identity = 89/183 (48.63%), Postives = 123/183 (67.21%), Query Frame = 1


Query: 67  AVAEDYKFPLVWIDLEMTGLNVETDRILEIACIITNGNLTKLVEGPDLVIHQSKECLDKM 126
           A  E     +VW+DLEMTGL++E D+I+E+AC+IT+ +L  L EGP+L+I Q  E LD M
Sbjct: 34  AAGESMAQRMVWVDLEMTGLDIEKDQIIEMACLITDSDLNILAEGPNLIIKQPDELLDSM 93

Query: 127 GEWCQSHHAASGLTKKVLRSTISEREAEKQVIQFVKKHVCTDKLHLAGNSVYMDFIFLKK 186
            +WC+ HH  SGLTK V  ST++ ++AE + + FV++        LAGNSV+ D  FL K
Sbjct: 94  SDWCKEHHGKSGLTKAVKESTVTLQQAEYEFLSFVRQQTPPGLCPLAGNSVHADKKFLDK 153

Query: 187 YMPDLAGLFSHVLVDVSSIKTLCDRWYPRDRKKAPPKENKHRAMDDIRESIMELKYYKEN 246
           +MP       + ++DVS++K LC RWYP D + AP K   HRA+DDI ESI EL++Y+ N
Sbjct: 154 HMPQFMKHLHYRIIDVSTVKELCRRWYPEDYEFAPKKAASHRALDDISESIKELQFYRNN 213

Query: 247 IFK 250
           IFK
Sbjct: 214 IFK 216

[Close]

BLAST of Cucsa.153050 vs. Swiss-Prot
Match: ORN_MOUSE (Oligoribonuclease, mitochondrial OS=Mus musculus GN=Rexo2 PE=1 SV=2)

HSP 1 Score: 187.6 bits (475), Expect = 1.7e-46
Identity = 89/183 (48.63%), Postives = 123/183 (67.21%), Query Frame = 1


Query: 67  AVAEDYKFPLVWIDLEMTGLNVETDRILEIACIITNGNLTKLVEGPDLVIHQSKECLDKM 126
           A  E     +VW+DLEMTGL++E D+I+E+AC+IT+ +L  L EGP+L+I Q  E LD M
Sbjct: 34  AAGESMAQRMVWVDLEMTGLDIEKDQIIEMACLITDSDLNILAEGPNLIIKQPDELLDSM 93

Query: 127 GEWCQSHHAASGLTKKVLRSTISEREAEKQVIQFVKKHVCTDKLHLAGNSVYMDFIFLKK 186
            +WC+ HH  SGLTK V  ST++ ++AE + + FV++        LAGNSV+ D  FL K
Sbjct: 94  SDWCKEHHGKSGLTKAVKESTVTLQQAEYEFLSFVRQQTPPGLCPLAGNSVHADKKFLDK 153

Query: 187 YMPDLAGLFSHVLVDVSSIKTLCDRWYPRDRKKAPPKENKHRAMDDIRESIMELKYYKEN 246
           +MP       + ++DVS++K LC RWYP D + AP K   HRA+DDI ESI EL++Y+ N
Sbjct: 154 HMPQFMKHLHYRIIDVSTVKELCRRWYPEDYEFAPKKAASHRALDDISESIKELQFYRNN 213

Query: 247 IFK 250
           IFK
Sbjct: 214 IFK 216

[Close]

BLAST of Cucsa.153050 vs. TrEMBL
Match: A0A0A0KZ28_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_4G279830 PE=4 SV=1)

HSP 1 Score: 512.3 bits (1318), Expect = 3.4e-142
Identity = 253/253 (100.00%), Postives = 253/253 (100.00%), Query Frame = 1


Query: 1   MAMKPLVNAFSLLELDAEDDQIPALSTSSKDDATVSYPSPTGKRKKEVNISGDILTGERQ 60
           MAMKPLVNAFSLLELDAEDDQIPALSTSSKDDATVSYPSPTGKRKKEVNISGDILTGERQ
Sbjct: 1   MAMKPLVNAFSLLELDAEDDQIPALSTSSKDDATVSYPSPTGKRKKEVNISGDILTGERQ 60

Query: 61  KQGQPNAVAEDYKFPLVWIDLEMTGLNVETDRILEIACIITNGNLTKLVEGPDLVIHQSK 120
           KQGQPNAVAEDYKFPLVWIDLEMTGLNVETDRILEIACIITNGNLTKLVEGPDLVIHQSK
Sbjct: 61  KQGQPNAVAEDYKFPLVWIDLEMTGLNVETDRILEIACIITNGNLTKLVEGPDLVIHQSK 120

Query: 121 ECLDKMGEWCQSHHAASGLTKKVLRSTISEREAEKQVIQFVKKHVCTDKLHLAGNSVYMD 180
           ECLDKMGEWCQSHHAASGLTKKVLRSTISEREAEKQVIQFVKKHVCTDKLHLAGNSVYMD
Sbjct: 121 ECLDKMGEWCQSHHAASGLTKKVLRSTISEREAEKQVIQFVKKHVCTDKLHLAGNSVYMD 180

Query: 181 FIFLKKYMPDLAGLFSHVLVDVSSIKTLCDRWYPRDRKKAPPKENKHRAMDDIRESIMEL 240
           FIFLKKYMPDLAGLFSHVLVDVSSIKTLCDRWYPRDRKKAPPKENKHRAMDDIRESIMEL
Sbjct: 181 FIFLKKYMPDLAGLFSHVLVDVSSIKTLCDRWYPRDRKKAPPKENKHRAMDDIRESIMEL 240

Query: 241 KYYKENIFKNSKK 254
           KYYKENIFKNSKK
Sbjct: 241 KYYKENIFKNSKK 253

[Close]

BLAST of Cucsa.153050 vs. TrEMBL
Match: A0A067KFX9_JATCU (Uncharacterized protein OS=Jatropha curcas GN=JCGZ_10670 PE=4 SV=1)

HSP 1 Score: 348.6 bits (893), Expect = 6.5e-93
Identity = 176/258 (68.22%), Postives = 209/258 (81.01%), Query Frame = 1


Query: 3   MKPLVNAFSLLELDAEDDQI-----PALSTSSKDDATVSYPSPTGKRKKEVNISGDILTG 62
           M  L NAFS+L+LDAEDDQ+     P++STSSK     +  + + + K   ++SG  L  
Sbjct: 1   MDYLSNAFSVLDLDAEDDQVDVVASPSISTSSKATPVSTNNTESSRNKLNGSVSG--LGL 60

Query: 63  ERQKQGQPNAVAED--YKFPLVWIDLEMTGLNVETDRILEIACIITNGNLTKLVEGPDLV 122
           E++KQ + N V     YK PLVWID+EMTGLN+E DRILEIACIIT+GNLTK VEGPDL+
Sbjct: 61  EKEKQHEQNLVTSSTAYKMPLVWIDMEMTGLNIEVDRILEIACIITDGNLTKSVEGPDLI 120

Query: 123 IHQSKECLDKMGEWCQSHHAASGLTKKVLRSTISEREAEKQVIQFVKKHVCTDKLHLAGN 182
           IHQSKECLD+MGEWCQSHHAASGLT KVL+S++SEREAEKQVI+FVK+H+ T    LAGN
Sbjct: 121 IHQSKECLDQMGEWCQSHHAASGLTDKVLQSSVSEREAEKQVIEFVKRHIGTYTPLLAGN 180

Query: 183 SVYMDFIFLKKYMPDLAGLFSHVLVDVSSIKTLCDRWYPRDRKKAPPKENKHRAMDDIRE 242
           SVY+DF+FLKKY+PDLA LFSHV+VDVSS+K LC RWYPRD+K+APPKENKHRAMDDIRE
Sbjct: 181 SVYVDFLFLKKYLPDLASLFSHVVVDVSSVKALCIRWYPRDQKRAPPKENKHRAMDDIRE 240

Query: 243 SIMELKYYKENIFKNSKK 254
           S+ ELKYYKENIFK   K
Sbjct: 241 SVRELKYYKENIFKARSK 256

[Close]

BLAST of Cucsa.153050 vs. TrEMBL
Match: W9RGV3_9ROSA (Uncharacterized protein OS=Morus notabilis GN=L484_022507 PE=4 SV=1)

HSP 1 Score: 340.5 bits (872), Expect = 1.8e-90
Identity = 178/254 (70.08%), Postives = 200/254 (78.74%), Query Frame = 1


Query: 3   MKPLVNAFSLLELDA-EDDQIPALSTSSKDDATVSYPSPTGKRKKEVNISGDILTGERQK 62
           M+ L NAFS+L LDA +DDQ    S+S+   A V   + +G   KE   +  +   E+ K
Sbjct: 1   MERLANAFSVLVLDAPDDDQARTASSSADSKAKVCASADSGVEDKEAKSTAIV---EKHK 60

Query: 63  QGQPN--AVAEDYKFPLVWIDLEMTGLNVETDRILEIACIITNGNLTKLVEGPDLVIHQS 122
             Q N      +YK PLVWIDLEMTGL+VE DRILEIACIIT+GNLTK VEGPDLVIHQS
Sbjct: 61  NNQQNLDTPPAEYKLPLVWIDLEMTGLDVEVDRILEIACIITDGNLTKSVEGPDLVIHQS 120

Query: 123 KECLDKMGEWCQSHHAASGLTKKVLRSTISEREAEKQVIQFVKKHVCTDKLHLAGNSVYM 182
           KECLD+MGEWCQSHHAASGLTKKVL ST+ EREAEKQVI+FVKK+V T   HLAGNSVYM
Sbjct: 121 KECLDQMGEWCQSHHAASGLTKKVLHSTMIEREAEKQVIEFVKKNVGTYTPHLAGNSVYM 180

Query: 183 DFIFLKKYMPDLAGLFSHVLVDVSSIKTLCDRWYPRDRKKAPPKENKHRAMDDIRESIME 242
           DFIFLKKYMPDLA LFSHV+VDVSS+K LC RWYPRD+KKAP KE KHRAMDDIRESI E
Sbjct: 181 DFIFLKKYMPDLASLFSHVVVDVSSVKALCIRWYPRDQKKAPAKEGKHRAMDDIRESIKE 240

Query: 243 LKYYKENIFKNSKK 254
           LKYYKE+IFK+  K
Sbjct: 241 LKYYKESIFKSKSK 251

[Close]

BLAST of Cucsa.153050 vs. TrEMBL
Match: D7T1F5_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VIT_06s0009g01890 PE=4 SV=1)

HSP 1 Score: 339.3 bits (869), Expect = 3.9e-90
Identity = 174/252 (69.05%), Postives = 203/252 (80.56%), Query Frame = 1


Query: 3   MKPLVNAFSLLELDAEDDQIPALSTSSKDDATVSYPSPTGKRKKEVNISGDILTGERQKQ 62
           M+ L N FS+L+LDA+DDQ+    +SS  D          K++K+   S +++  + +K 
Sbjct: 1   MEKLSNIFSVLQLDADDDQLHMPDSSSTTD----------KKEKKGKSSSNLVPSKNEKN 60

Query: 63  GQPNAV--AEDYKFPLVWIDLEMTGLNVETDRILEIACIITNGNLTKLVEGPDLVIHQSK 122
            + +++  +E Y+ PLVWIDLEMTGLNVE DRILEIACIIT+GNL K VEGPDLVIHQ+K
Sbjct: 61  CEQDSMIPSEQYRLPLVWIDLEMTGLNVEVDRILEIACIITDGNLIKSVEGPDLVIHQTK 120

Query: 123 ECLDKMGEWCQSHHAASGLTKKVLRSTISEREAEKQVIQFVKKHVCTDKLHLAGNSVYMD 182
           ECLD MGEWCQSHH+ASGLTKKVLRSTISE+EAEKQVI+FVK++V T    LAGNSVYMD
Sbjct: 121 ECLDNMGEWCQSHHSASGLTKKVLRSTISEQEAEKQVIEFVKRNVGTYTPLLAGNSVYMD 180

Query: 183 FIFLKKYMPDLAGLFSHVLVDVSSIKTLCDRWYPRDRKKAPPKENKHRAMDDIRESIMEL 242
           F+FLKKYMPDLA LFSHVLVDVSSIK LC RWYPRD KKAP KENKHRAMDDIRESI EL
Sbjct: 181 FLFLKKYMPDLASLFSHVLVDVSSIKALCIRWYPRDSKKAPSKENKHRAMDDIRESIREL 240

Query: 243 KYYKENIFKNSK 253
           KYY+ENIFK SK
Sbjct: 241 KYYRENIFKASK 242

[Close]

BLAST of Cucsa.153050 vs. TrEMBL
Match: A0A0D2RR44_GOSRA (Uncharacterized protein OS=Gossypium raimondii GN=B456_004G001600 PE=4 SV=1)

HSP 1 Score: 339.0 bits (868), Expect = 5.1e-90
Identity = 172/251 (68.53%), Postives = 198/251 (78.88%), Query Frame = 1


Query: 3   MKPLVNAFSLLELDAEDDQIPALSTSSKDDATVSYPSPTGKRKKEVNISGDILTGERQKQ 62
           M  L NAFSLL++D +D   P  S+S+          P+GK K         + G+   +
Sbjct: 1   MDRLSNAFSLLDIDVDDHHPPPASSSAS--------KPSGKSK---------INGKGSTE 60

Query: 63  GQPNAVAEDYKFPLVWIDLEMTGLNVETDRILEIACIITNGNLTKLVEGPDLVIHQSKEC 122
            +P  ++E+YK PLVWIDLEMTGLN+ETDRILEIACIIT+G LTK +EGPDLVIHQSKEC
Sbjct: 61  LKPALLSENYKLPLVWIDLEMTGLNIETDRILEIACIITDGYLTKSLEGPDLVIHQSKEC 120

Query: 123 LDKMGEWCQSHHAASGLTKKVLRSTISEREAEKQVIQFVKKHVCTDKLHLAGNSVYMDFI 182
           LD+MGEWCQ+HHAASGLTKKVL+STISEREAEKQVI+FVK+HV T   HLAGNSVYMDFI
Sbjct: 121 LDRMGEWCQNHHAASGLTKKVLQSTISEREAEKQVIEFVKRHVGTYTPHLAGNSVYMDFI 180

Query: 183 FLKKYMPDLAGLFSHVLVDVSSIKTLCDRWYPRDRKKAPPKENKHRAMDDIRESIMELKY 242
           FLKKYMPDLA LFSHV+VDVSS++ LC RWYPRD+KKAP KE KHRAMDDIRESI ELKY
Sbjct: 181 FLKKYMPDLASLFSHVVVDVSSVRALCIRWYPRDQKKAPAKEKKHRAMDDIRESISELKY 234

Query: 243 YKENIFKNSKK 254
           +KE IFK   K
Sbjct: 241 FKETIFKAKSK 234

[Close]

BLAST of Cucsa.153050 vs. TAIR10
Match: AT2G26970.1 (AT2G26970.1 Polynucleotidyl transferase, ribonuclease H-like superfamily protein)

HSP 1 Score: 293.1 bits (749), Expect = 1.6e-79
Identity = 155/247 (62.75%), Postives = 183/247 (74.09%), Query Frame = 1


Query: 3   MKPLVNAFSLLELDAEDDQIPALSTSSKDDATVSYPSPTGKRKKEVNISGDILTGERQKQ 62
           M  L NAFS+L    ED   P  S+SS           TGK+++ VN  G +  G     
Sbjct: 1   MNKLSNAFSVLAFADED--APMASSSS-----------TGKQEESVN--GSLEDG----- 60

Query: 63  GQPNAVAEDYKFPLVWIDLEMTGLNVETDRILEIACIITNGNLTKLVEGPDLVIHQSKEC 122
                   DYK PLVWIDLEMTGLNVE DRILEIACIITNG+LT+ VEGPDLV+ Q+K+C
Sbjct: 61  --------DYKQPLVWIDLEMTGLNVEVDRILEIACIITNGDLTQSVEGPDLVVRQTKDC 120

Query: 123 LDKMGEWCQSHHAASGLTKKVLRSTISEREAEKQVIQFVKKHVCTDKLHLAGNSVYMDFI 182
           LDKM +WCQ+HH ASGLTKKVL S I+EREAE++VI+FVKKHV +    LAGNSVY+DF+
Sbjct: 121 LDKMDDWCQTHHGASGLTKKVLLSAITEREAEQKVIEFVKKHVGSGNPLLAGNSVYVDFL 180

Query: 183 FLKKYMPDLAGLFSHVLVDVSSIKTLCDRWYPRDRKKAPPKENKHRAMDDIRESIMELKY 242
           FLKKYMP+LA LF H+LVDVSS+K LC RW+P +R+KAP K+N HRAMDDIRESI ELKY
Sbjct: 181 FLKKYMPELAALFPHILVDVSSVKALCARWFPIERRKAPAKKNNHRAMDDIRESIKELKY 219

Query: 243 YKENIFK 250
           YK+ IFK
Sbjct: 241 YKKTIFK 219

[Close]

BLAST of Cucsa.153050 vs. NCBI nr
Match: gi|449448848|ref|XP_004142177.1| (PREDICTED: oligoribonuclease [Cucumis sativus])

HSP 1 Score: 512.3 bits (1318), Expect = 4.8e-142
Identity = 253/253 (100.00%), Postives = 253/253 (100.00%), Query Frame = 1


Query: 1   MAMKPLVNAFSLLELDAEDDQIPALSTSSKDDATVSYPSPTGKRKKEVNISGDILTGERQ 60
           MAMKPLVNAFSLLELDAEDDQIPALSTSSKDDATVSYPSPTGKRKKEVNISGDILTGERQ
Sbjct: 1   MAMKPLVNAFSLLELDAEDDQIPALSTSSKDDATVSYPSPTGKRKKEVNISGDILTGERQ 60

Query: 61  KQGQPNAVAEDYKFPLVWIDLEMTGLNVETDRILEIACIITNGNLTKLVEGPDLVIHQSK 120
           KQGQPNAVAEDYKFPLVWIDLEMTGLNVETDRILEIACIITNGNLTKLVEGPDLVIHQSK
Sbjct: 61  KQGQPNAVAEDYKFPLVWIDLEMTGLNVETDRILEIACIITNGNLTKLVEGPDLVIHQSK 120

Query: 121 ECLDKMGEWCQSHHAASGLTKKVLRSTISEREAEKQVIQFVKKHVCTDKLHLAGNSVYMD 180
           ECLDKMGEWCQSHHAASGLTKKVLRSTISEREAEKQVIQFVKKHVCTDKLHLAGNSVYMD
Sbjct: 121 ECLDKMGEWCQSHHAASGLTKKVLRSTISEREAEKQVIQFVKKHVCTDKLHLAGNSVYMD 180

Query: 181 FIFLKKYMPDLAGLFSHVLVDVSSIKTLCDRWYPRDRKKAPPKENKHRAMDDIRESIMEL 240
           FIFLKKYMPDLAGLFSHVLVDVSSIKTLCDRWYPRDRKKAPPKENKHRAMDDIRESIMEL
Sbjct: 181 FIFLKKYMPDLAGLFSHVLVDVSSIKTLCDRWYPRDRKKAPPKENKHRAMDDIRESIMEL 240

Query: 241 KYYKENIFKNSKK 254
           KYYKENIFKNSKK
Sbjct: 241 KYYKENIFKNSKK 253

[Close]

BLAST of Cucsa.153050 vs. NCBI nr
Match: gi|659097843|ref|XP_008449843.1| (PREDICTED: oligoribonuclease [Cucumis melo])

HSP 1 Score: 490.0 bits (1260), Expect = 2.6e-135
Identity = 242/253 (95.65%), Postives = 246/253 (97.23%), Query Frame = 1


Query: 1   MAMKPLVNAFSLLELDAEDDQIPALSTSSKDDATVSYPSPTGKRKKEVNISGDILTGERQ 60
           MA KPLVNAFS+LELDAEDDQIPALSTSSKDDATVSY S TGK KKEVNISGDI TGERQ
Sbjct: 1   MATKPLVNAFSVLELDAEDDQIPALSTSSKDDATVSYSSSTGKSKKEVNISGDIPTGERQ 60

Query: 61  KQGQPNAVAEDYKFPLVWIDLEMTGLNVETDRILEIACIITNGNLTKLVEGPDLVIHQSK 120
           KQGQPNAVAEDYKFPLVWIDLEMTGLNVETDRILEIACIITNGNLTKLVEGPDLVIHQSK
Sbjct: 61  KQGQPNAVAEDYKFPLVWIDLEMTGLNVETDRILEIACIITNGNLTKLVEGPDLVIHQSK 120

Query: 121 ECLDKMGEWCQSHHAASGLTKKVLRSTISEREAEKQVIQFVKKHVCTDKLHLAGNSVYMD 180
           ECL+KMGEWCQSHHAASGLTKKV RSTISEREAEKQVI+FVKKHVC DKLHLAGNSVYMD
Sbjct: 121 ECLEKMGEWCQSHHAASGLTKKVQRSTISEREAEKQVIEFVKKHVCCDKLHLAGNSVYMD 180

Query: 181 FIFLKKYMPDLAGLFSHVLVDVSSIKTLCDRWYPRDRKKAPPKENKHRAMDDIRESIMEL 240
           FIFLKKYMPDLAGLFSHVLVDVSS+KTLCDRWYPRDRKKAPPKENKHRAMDDIRESIMEL
Sbjct: 181 FIFLKKYMPDLAGLFSHVLVDVSSVKTLCDRWYPRDRKKAPPKENKHRAMDDIRESIMEL 240

Query: 241 KYYKENIFKNSKK 254
           KYYKENIFKNSKK
Sbjct: 241 KYYKENIFKNSKK 253

[Close]

BLAST of Cucsa.153050 vs. NCBI nr
Match: gi|802616771|ref|XP_012075386.1| (PREDICTED: oligoribonuclease [Jatropha curcas])

HSP 1 Score: 348.6 bits (893), Expect = 9.3e-93
Identity = 176/258 (68.22%), Postives = 209/258 (81.01%), Query Frame = 1


Query: 3   MKPLVNAFSLLELDAEDDQI-----PALSTSSKDDATVSYPSPTGKRKKEVNISGDILTG 62
           M  L NAFS+L+LDAEDDQ+     P++STSSK     +  + + + K   ++SG  L  
Sbjct: 1   MDYLSNAFSVLDLDAEDDQVDVVASPSISTSSKATPVSTNNTESSRNKLNGSVSG--LGL 60

Query: 63  ERQKQGQPNAVAED--YKFPLVWIDLEMTGLNVETDRILEIACIITNGNLTKLVEGPDLV 122
           E++KQ + N V     YK PLVWID+EMTGLN+E DRILEIACIIT+GNLTK VEGPDL+
Sbjct: 61  EKEKQHEQNLVTSSTAYKMPLVWIDMEMTGLNIEVDRILEIACIITDGNLTKSVEGPDLI 120

Query: 123 IHQSKECLDKMGEWCQSHHAASGLTKKVLRSTISEREAEKQVIQFVKKHVCTDKLHLAGN 182
           IHQSKECLD+MGEWCQSHHAASGLT KVL+S++SEREAEKQVI+FVK+H+ T    LAGN
Sbjct: 121 IHQSKECLDQMGEWCQSHHAASGLTDKVLQSSVSEREAEKQVIEFVKRHIGTYTPLLAGN 180

Query: 183 SVYMDFIFLKKYMPDLAGLFSHVLVDVSSIKTLCDRWYPRDRKKAPPKENKHRAMDDIRE 242
           SVY+DF+FLKKY+PDLA LFSHV+VDVSS+K LC RWYPRD+K+APPKENKHRAMDDIRE
Sbjct: 181 SVYVDFLFLKKYLPDLASLFSHVVVDVSSVKALCIRWYPRDQKRAPPKENKHRAMDDIRE 240

Query: 243 SIMELKYYKENIFKNSKK 254
           S+ ELKYYKENIFK   K
Sbjct: 241 SVRELKYYKENIFKARSK 256

[Close]

BLAST of Cucsa.153050 vs. NCBI nr
Match: gi|645251547|ref|XP_008231733.1| (PREDICTED: oligoribonuclease [Prunus mume])

HSP 1 Score: 343.6 bits (880), Expect = 3.0e-91
Identity = 180/256 (70.31%), Postives = 205/256 (80.08%), Query Frame = 1


Query: 3   MKPLVNAFSLLELDAEDDQIPALSTS---SKDDATVSYPSPTGKR-KKEVNISGD-ILTG 62
           M+ L NAFS+LELDAEDD     ++S   +KDD T S    +GK+ +K+VN S + +L  
Sbjct: 1   MEDLANAFSVLELDAEDDDQAREASSVSKNKDDTTKS----SGKKMEKKVNNSDNMLLVK 60

Query: 63  ERQKQGQPNAVAEDYKFPLVWIDLEMTGLNVETDRILEIACIITNGNLTKLVEGPDLVIH 122
           E++ Q       E+YK PLVWIDLEMTGLNVE DRILEIACIIT+G LTK VEGPDLVIH
Sbjct: 61  EKESQQNSEMPLEEYKLPLVWIDLEMTGLNVEVDRILEIACIITDGKLTKSVEGPDLVIH 120

Query: 123 QSKECLDKMGEWCQSHHAASGLTKKVLRSTISEREAEKQVIQFVKKHVCTDKLHLAGNSV 182
           Q+KECLD+MG+WCQSHH ASGLTKKVL ST+SEREAEKQVI+FVK++V T    LAGNSV
Sbjct: 121 QTKECLDRMGDWCQSHHKASGLTKKVLESTVSEREAEKQVIEFVKRNVGTYTPQLAGNSV 180

Query: 183 YMDFIFLKKYMPDLAGLFSHVLVDVSSIKTLCDRWYPRDRKKAPPKENKHRAMDDIRESI 242
           Y+DF FLKKYMPDLA  FSHV+VDVSS+K LC RWYPRD KKAP KEN HRAMDDIRESI
Sbjct: 181 YVDFAFLKKYMPDLANRFSHVIVDVSSVKALCIRWYPRDNKKAPSKENNHRAMDDIRESI 240

Query: 243 MELKYYKENIFKNSKK 254
            ELKYYKENIFK SKK
Sbjct: 241 RELKYYKENIFKASKK 252

[Close]

BLAST of Cucsa.153050 vs. NCBI nr
Match: gi|694328571|ref|XP_009355085.1| (PREDICTED: oligoribonuclease isoform X2 [Pyrus x bretschneideri])

HSP 1 Score: 342.4 bits (877), Expect = 6.6e-91
Identity = 171/251 (68.13%), Postives = 202/251 (80.48%), Query Frame = 1


Query: 3   MKPLVNAFSLLELDAEDDQIPALSTSSKDDATVSYPSPTGKRKKEVNISGDILTGERQKQ 62
           M+ L NAFS+LELDAEDD     ++S+ +D     P  +G  KK +N    +L  E+Q Q
Sbjct: 1   MECLANAFSVLELDAEDDDPMRFASSASNDT----PKSSGSDKKVINSDKMLLVNEKQSQ 60

Query: 63  GQPNAVAEDYKFPLVWIDLEMTGLNVETDRILEIACIITNGNLTKLVEGPDLVIHQSKEC 122
                + ++YK PLVWIDLEMTGLNVE DRILEIACIIT+G LTK VEGPDLVIHQ+KEC
Sbjct: 61  QSTEMLPKEYKMPLVWIDLEMTGLNVEVDRILEIACIITDGKLTKSVEGPDLVIHQTKEC 120

Query: 123 LDKMGEWCQSHHAASGLTKKVLRSTISEREAEKQVIQFVKKHVCTDKLHLAGNSVYMDFI 182
           LD+MGEWCQ+HHAASGLT KVL S+ISE+EAE+QVI+FVK+++ T +  LAGNSVY+DF+
Sbjct: 121 LDRMGEWCQTHHAASGLTTKVLESSISEKEAEQQVIEFVKRNIGTYQPVLAGNSVYVDFL 180

Query: 183 FLKKYMPDLAGLFSHVLVDVSSIKTLCDRWYPRDRKKAPPKENKHRAMDDIRESIMELKY 242
           FLKKYMPDLA LFSHVLVDVSSIK LC RWYPRD +KAP KENKHRA+DDIRESI ELKY
Sbjct: 181 FLKKYMPDLARLFSHVLVDVSSIKALCIRWYPRDNQKAPSKENKHRALDDIRESIRELKY 240

Query: 243 YKENIFKNSKK 254
           YK+NIFK  +K
Sbjct: 241 YKDNIFKAFRK 247

The following BLAST results are available for this feature:

BLAST of Cucsa.153050 vs. Swiss-Prot


Match Name	E-value	Identity	Description
ORN_ARATH	2.9e-78	62.75	Oligoribonuclease OS=Arabidopsis thaliana GN=At2g26970 PE=2 SV=2	[more]
ORN_HUMAN	7.7e-47	48.66	Oligoribonuclease, mitochondrial OS=Homo sapiens GN=REXO2 PE=1 SV=3	[more]
ORN_BOVIN	1.3e-46	48.13	Oligoribonuclease, mitochondrial OS=Bos taurus GN=REXO2 PE=2 SV=1	[more]
ORN_RAT	1.7e-46	48.63	Oligoribonuclease, mitochondrial OS=Rattus norvegicus GN=Rexo2 PE=2 SV=1	[more]
ORN_MOUSE	1.7e-46	48.63	Oligoribonuclease, mitochondrial OS=Mus musculus GN=Rexo2 PE=1 SV=2	[more]

BLAST of Cucsa.153050 vs. TrEMBL


Match Name	E-value	Identity	Description
A0A0A0KZ28_CUCSA	3.4e-142	100.00	Uncharacterized protein OS=Cucumis sativus GN=Csa_4G279830 PE=4 SV=1	[more]
A0A067KFX9_JATCU	6.5e-93	68.22	Uncharacterized protein OS=Jatropha curcas GN=JCGZ_10670 PE=4 SV=1	[more]
W9RGV3_9ROSA	1.8e-90	70.08	Uncharacterized protein OS=Morus notabilis GN=L484_022507 PE=4 SV=1	[more]
D7T1F5_VITVI	3.9e-90	69.05	Putative uncharacterized protein OS=Vitis vinifera GN=VIT_06s0009g01890 PE=4 SV=...	[more]
A0A0D2RR44_GOSRA	5.1e-90	68.53	Uncharacterized protein OS=Gossypium raimondii GN=B456_004G001600 PE=4 SV=1	[more]

BLAST of Cucsa.153050 vs. TAIR10


Match Name	E-value	Identity	Description
AT2G26970.1	1.6e-79	62.75	Polynucleotidyl transferase, ribonuclease H-like superfamily protein	[more]

BLAST of Cucsa.153050 vs. NCBI nr


Match Name	E-value	Identity	Description
gi\|449448848\|ref\|XP_004142177.1\|	4.8e-142	100.00	PREDICTED: oligoribonuclease [Cucumis sativus]	[more]
gi\|659097843\|ref\|XP_008449843.1\|	2.6e-135	95.65	PREDICTED: oligoribonuclease [Cucumis melo]	[more]
gi\|802616771\|ref\|XP_012075386.1\|	9.3e-93	68.22	PREDICTED: oligoribonuclease [Jatropha curcas]	[more]
gi\|645251547\|ref\|XP_008231733.1\|	3.0e-91	70.31	PREDICTED: oligoribonuclease [Prunus mume]	[more]
gi\|694328571\|ref\|XP_009355085.1\|	6.6e-91	68.13	PREDICTED: oligoribonuclease isoform X2 [Pyrus x bretschneideri]	[more]

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **INTERPRO**
Term	Definition
IPR012337	RNaseH-like_sf
IPR013520	Exonuclease_RNaseT/DNA_pol3

Vocabulary: **Molecular Function**
Term	Definition
GO:0003676	nucleic acid binding

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0090305	nucleic acid phosphodiester bond hydrolysis
biological_process	GO:0008150	biological_process
cellular_component	GO:0005575	cellular_component
molecular_function	GO:0004527	exonuclease activity
molecular_function	GO:0003676	nucleic acid binding
molecular_function	GO:0016740	transferase activity

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Cucsa.153050.1	Cucsa.153050.1	mRNA

InterPro

Analysis Name: InterPro Annotations of cucumber (Gy14)
Date Performed: 2017-01-17


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR012337	Ribonuclease H-like domain	GENE3D	G3DSA:3.30.420.10		coord: 73..249 score: 1.1
IPR012337	Ribonuclease H-like domain	unknown	SSF53098	Ribonuclease H-like	coord: 74..248 score: 3.24
IPR013520	Exonuclease, RNase T/DNA polymerase III	PFAM	PF00929	RNase_T	coord: 77..238 score: 6.9
IPR013520	Exonuclease, RNase T/DNA polymerase III	SMART	SM00479	exoiiiendus	coord: 75..249 score: 2.5
None	No IPR available	PANTHER	PTHR11046	OLIGORIBONUCLEASE, MITOCHONDRIAL	coord: 1..252 score: 2.8E
None	No IPR available	PANTHER	PTHR11046:SF4	SUBFAMILY NOT NAMED	coord: 1..252 score: 2.8E

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
Cucsa.153050	Cla003154	Watermelon (97103) v1	cgywmB272
Cucsa.153050	Csa4G279830	Cucumber (Chinese Long) v2	cgycuB220
Cucsa.153050	MELO3C014695	Melon (DHL92) v3.5.1	cgymeB257
Cucsa.153050	ClCG02G024120	Watermelon (Charleston Gray)	cgywcgB258
Cucsa.153050	CSPI04G12850	Wild cucumber (PI 183967)	cgycpiB225
Cucsa.153050	CmaCh02G011950	Cucurbita maxima (Rimu)	cgycmaB0424
Cucsa.153050	CmoCh02G012270	Cucurbita moschata (Rifu)	cgycmoB0424
Cucsa.153050	Lsi10G009540	Bottle gourd (USVL1VR-Ls)	cgylsiB245
Cucsa.153050	Cp4.1LG05g05370	Cucurbita pepo (Zucchini)	cgycpeB0410
Cucsa.153050	MELO3C014695.2	Melon (DHL92) v3.6.1	cgymedB255
Cucsa.153050	CsaV3_4G023210	Cucumber (Chinese Long) v3	cgycucB231
Cucsa.153050	Cla97C02G050340	Watermelon (97103) v2	cgywmbB259
Cucsa.153050	Bhi10G000361	Wax gourd	cgywgoB298
Cucsa.153050	Carg02763	Silver-seed gourd	carcgyB1040

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:


Gene	Organism	Block
Cucsa.153050	Cucurbita maxima (Rimu)	cgycmaB0423
Cucsa.153050	Cucurbita moschata (Rifu)	cgycmoB0423
Cucsa.153050	Cucurbita pepo (Zucchini)	cgycpeB0409
Cucsa.153050	Silver-seed gourd	carcgyB0603