Cp4.1LG05g05370 (gene) Cucurbita pepo (Zucchini)

Overview
NameCp4.1LG05g05370
Typegene
OrganismCucurbita pepo (Cucurbita pepo (Zucchini))
DescriptionOligoribonuclease
LocationCp4.1LG05 : 3212474 .. 3218532 (-)
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
CGACAAGAGGGAGACCTTAGTCATTCGGGCGGCAAGATTTGGGGGCAGAGAGAGAGAGAGAGCAATGGAGCCGTTCGTGAATGCGTTCTCAGTATTGGAGCTCGATGCTGAAGACGATCAAGTTCGTCCTCCTTCTACTTTCTCCAAAGACGAGGCTGCCGCTTCTTCCTCTTCAAGAACAGGTTGATTTAGTTATGATGCGATTTAGGGTGTTCTTCTCGTTATCAAGTGTCACATTTTACAGGTGCAAGGTTGAAGGTTCTGAGAACTTCAGGAGTTCGATTAGATTAGATTACCTTCCCCGTTGATCGCTTAGAGTGCATTAAGAATTAGGTTCAGGTAGTTTCTTCGGAAAATTGAAGTGATACAATAAGAATCGATTGTTCTGTTTGCCCAGTTTTGAGTTCCGCGGCATTGTGGACATTAACAAGGCTGAAGATTTGATTCTATCTTCGACTTCTGAATTTAAGCTGCCAATTTGAGCTTTCGACTCAATAATAATTGAAAAAATTGGCTTTTAGGAAACGATGTAGCTTTACGATCAGGCTTTTCATTGTCACTTGTTGTGTCGTTGATGTAGATTAGACCCCCGAGACCCCACGACATGGTAGTTGTGGGTTTCGTTACTTCCTGGTTTTACGCAATGCATTACACGGTAGCTTTGTTCAATTTCAAGCTTGGAATGATGCTATTGTTTTGCAATTTGATATGTTAAGTTTTACCCTTATGTCTCTGATGAAATTGTTCATTTTTTTGGGTCAGTATTTTCCTGCGATTATTCCTTGTTGATCCCCCACGGCAGACATGGATATTTCATCGATATTTCGCACATAATACGTAGTTATTTTTCTTGATTTTTCTCCCTGTTGGTTTTTTACTGAATTAATCTTTCAAGCAATATATGTTGTAGTAATCCATCTTCTTAGTATGGATATTACCATTGACGTTTCATGCATAGTGAATAGGATACAGTTCTTTTAAGTGTGGTTAACGGTTGTGGGTATTTATTTTTCTATTGTAAATTCCTCCCATCTAATCCTTGAAAAAAAGTAGAACATGACCCTGTGGTGTGGTTTGATTAATTGAATCAGGAAAAAGCAAGAAGGAAAACATCTCTGGTGATATTCTGATGGGAGAAAGACAGAAACAAAGTCAACCAGATGTAGCTGCAGAAGACTACAAGTTTCCACTTGTTTGGATTGACCTGGAAATGACTGGTAACTAACAAGTATTAACTAGCCCATATGCTTTAAGCTTGTAAAACGTGGATTGAAGAGTGGGAGTAGATTATAGCTATAAGAAACCCCCTCGTTTTGGGGTTTTATCATTAAATATTGAAATCAAGTCCAACGGAATTTAAAAATTTATATTTGCCCGGGGTTGAATGGACTGGATATTCAACATATTACCTATAATTTTTTTTTTCTGTTACTTTTTAATGGAAGTGTTTGCTCCTTACAATTCTTTTGTCTTCTTCTGTGGCAATGGGATGACTTATTTTTCTGTAACTTTCTCCACACACACCCTAAAAAGAAAAAAAAGAAAAGAAGAAAAAGAAACTATAACCCTTCTAGCTTCCTCAAAACATATATCCTATGGTTTCTCTTTATGGAAATAAGAATATATCCTATGGTTTTTCTTTATTGAGAAGATAGATTCTATAAGTTTAAGTGAAGGCCAAGACAGGCTGGGGTGGGTGAATAATCCCATGGGAGACATCACCACCAGATCGACTTTTCTCCATATTGCAAAGAAAAGTCACAGACTGAAAGCTCATATGGTGAGAAAACACGGTTGAAAAGCTCTAGAAATAGTTCCCAAATTGATCTTTGCCCCCTTGGGTTGTAGCTTATGTCTAAAACAGATGGAATCCTTATATCATATTTTCCTTCACAACCCATATGCTTCTAATGGTTGGATTTGGTTGTTGGGAGAGTTTGGTTTGTCCTACTGCTTATTGAACAGAAATGACAATTGGCTGGTAGAATGTTTGACTGGTAGTTGTTTTAAGAACCGGGCTAATATTTTGTGGCAATGTGCAGTTAGAGCCTTTGTCTTGCTGCTGTGGTTATATCATAGGGTTGTTAGTCCCACGTTCTTAGCAATGTGGAAGCCAAAATTCTTGTTAGACTTGAGTTTGACACTATTTACCATTCCATGCAACATCTTTGGCTAGAAAAGAAGGCCTAATCATTGTTGGTTGATAATATCCTGGCTATTTGAAAAGATGACGAGAGCAGCCTATAAAACATTTGGGATGGGGAATTAAAGATTAATGCCTCTAACAGGGCTTTCTTTCCAAAGAATTTTAAAACTGTTCATTTGTGTGTGCTAATGTGACTGTTGAGATCTGTTTCCAATCTCTTTTTTGCCTTCTTCTCCTTAGAATTTTTATCCTCCACACTTTTGTACTTGTTTTTTAGGTCGATACCTTCCTTTACTTATTTAAGATGCTGAATTCATAATTTCTAATGGTATTTTTTCTCTGTTTGACTTACTATGCAGGTTTAAATGTAGAAACAGATAGAATACTGGAGATAGCTTGTATAATTACCAATGGAAGTCTGACCAAATTGGTTGAGGTATCTTTGCTATTGGTTATTCAATTGTGTTTTCCATGAATGCATTTGCCCCCGTTTGTTTGTGTCATTGAATTTTATGCCTTCTTTGACTTCCCTACACCATTGACAAATACTTGTCACTGTTCATCATTGGTTATCTTATTTATGTTTGTCAATAATTTCCTTTCATCAATGAAGTAACGAAAGAAACACAATATTTTCCGATAAGGTCGAACAAAATACAATGCAGTTTTGACAAGAAACCTGACTCAATATATCAGCGTCAGTCTTTGCAAATGCCTAAAACAAACAAGAGAAGTTCAAAAGTTGCAACCTTAGTCTCATCGCTTCTTTGTGTTTCGATTTCTATTTTATGTTTCCAGGGTCCTCATCTAGTTATTCACCAATCAAAAGAATGTCTTGAAAAAATGGGAGAATGGTGTCAAAGTCATCACGCAGCCAGTGGTAAGAACCAACAAGCTTAATCAATATACCACTTCATTGTATATTCATGGCTTCTGGCTTTCTGCCTTACTTTTTTTCTTGTGGATGAAACAAATTGTTATATTACACTGTCGTTATTCAGGATTGACAAAAAAAGTGCTACAAAGTACAATTAGTGAACGAGAAGCTGAAAAACAGGTGTGTAAAAATTTATCTAATGCTAGGCTCCTCCCCTCTTGATGCAATTTTTTTTTATTCGTATCCTTAATTCATAAATTTAAGTCATTTGATGTACGTATTATTGTGATAAATTTTGCGGTGCCTTGCGGCCACACAAAAAATAATCATAAATACAGATAGGTCAAGAATCCTGCAATGAATGAACTTGGTAACTTATAATAATAAACAACATAAAAAATAAGCGTTTCTTGTCTATAATCTGGTTTTAATGATAATGACAACGTTAATTTGAATCTTTATTTCATCTTCTTCATAATACCATCATCTCCCAGACCTTAGTTTGAAGGTCTTACTTCATGTTTAAGCACAGATGCACATTAGTTGTACAAGGGAGGGAAAGCACCCCACAACCAGGCGGTTATTAGAAGGCTTCCCACTAGTTAATTATAGGGGGAAAAAAAGTTTGACCAGCTGCCTCAAAATAATAATAATAGATAAATAAAATACAAGTGTGTGCAAAAATGCTTGGATCCTATAGCTCATCCCTTAGCGTATCATTCCTTTGGATTACTACTCTATTTTCTCAATCCAAAGATTTCTAAGAACTATACAGACACCACCCACGCTCTCATTTTAAAATTATGATGAGGAAGAGTAGACTGACGAAGTCTTCCTTTATGAGAAACCAACTATCATTACTGACTGACAATCCATACATCCTTAATGGTTTTGTTTTTACGATGAAGAAAATCCATCAATTTCTGCAACATAGCTGCTAGGGAAACAATTCCATCCAGCAATCCTCCGAAACCAGATCATAGAGCCATGTCCAATAGACATTTTTCTAAGGATGTAGTTGAATGATCTTGGTTGAAAACAAAGTCAACGGCTTTTGAAAGATCTGTAACTATACTTTTTAGTGATTACCAACAGTATCATAAATGTGTATGTAATNTTTTTTTTTTTTTTTTTTTTTTTTTTTTGCTCAAATTTTATGCAATAACATTTGTAATTTGCAGGTTATAGAATTTGTGAAGAAACATGTTGGTAGCTATACTCTACATTTGGCTGGAAATTCAGTCTATGTGGATTTTATTTTTTTGAAGGTAGTCCCACAGCAATATTCTTTATTTTCTCACAATTTAACGTAATTGTATCTTTGGTTTGAATTAATTTATTGTGTTATATAAAGTAAACGTCTGAGTTTAGTCAATATGTCAATATACATTTTTATATAATTTATTTATGCACTCAACTGTTTCTTGTCTTTTTGGGGCTTGCATTTGATGCTTTCTCCTGGGTTATCTGTTCTTTAGAATCTTTTTGTTGCTTTCACTGTCCTAAATAAAGGTCGTGTTATCTTGAAAATGAAAATTGTTTATTATTTAATATTCAATGATATCTTCACTTTAGTAAGTTTTACATGTGTGATATGTCTAATTTATTTGCATTATTGAATAAGCTTAATGGTTTTCGTTGATATGTGGTTATATTTTCCACCCCTTTTGAGAACAAATACTGGTTTGCAATGTCTTTCGTCCTAACGACCTGTTTTATTCCCTTCAGAAATACATGCCAGATTTGGCTGGACTTTTTTCGCACGTACTTGTTGACGTCAGTAGTGTTAAGGCTCTATGCTTTCGCTGGTTTCCAAGAGGTAAAAAGATGTTGATGGTTTTAGAGCAAAATGACAAGCATGCTGTTCTTAATTCTCTGTTTCATATTAAAAATAAGAAACACATTATTTCCTTGCACTTGTTCCTCTGTAATTGCAAACCTCGACCAGTATTCTTGTTCAAATTAGAAACCCTTTATGTCAATTGCGACTAAATTGATCACGTTACTTATTGTCTCATGGGATTCCGAGTTAATAGCCATCTAAATATCATCTCTGAAAGATATTTAGGAGGCTTGTTAGATTTTAGTGGCATTACACTCTTCGATCAAACATTTACTTGATTCATAGGACGATTGTGCCAACTTGAGAATAGAACTGACATAAAATATATTTGATCATTGGGTCAGAAGTATGAATCTCCCATCCTATATTTTTTTCTAAAAAGAAAACAGGAACAATCGTTTTGAGAATTTTAATGGAAATCTCGCAGCTGCTTATGATGTCTTAGGAATCTGTAGCCTTTTTGTAGACTGTTGATCAATAAAACCAAACATAGACTCACCTTGCAACATTTGGTTATTGAATTACTTGAGCATACATCAACAACTCATTTCCTTTCCAGATCAGAAGAAAGCTCCACCGAAGGAGAATAAACATAGGGCTATGGATGATATCAGAGAAAGCATAATGGAACTCAAATACTACAAGGAAAATATATTTAAGAAGCCTAAAAAGTGACGCAGGAGGAGGAGGAGGCACCACAACCACAAGACTACATGTCTGTACGGTACGCGGAGGTTTTACTTTAAAATTCCAATCTACCATTCATCTCCTTGTTCAATTGTATATGATGAAAGCTCTTTAGCTGAAACAGTTATCTAAATCTATCTATTATTTGATTGTAGTTGCTGGATTCATTGCTTGGAGAGCCTTCATGGTATCAAATACATTGTGTTGATTGATTAACTGCTTGCTGGATTCATTGCTTGGAGAGCCTCCATGGTATCTAATACATTGTGTTCATTAACTGCTTTCAAATCCAAACATACTTGCGGATCCAAGAGTTTGTAGATCATCTATGTTAGAATTTATTTTCTTTATATTCTATTGGGTATATATAATTTAATCTTTTATCTATTTGAAATGGTCACTTGTTCGATGCCATTACTATATGTTTCTATAAACTATTTTTTTCTCCGTGTTATCTTGTATATAGCTCAACTCGTTAAAAAATTGATATCTCTTTGAACGAATAG

mRNA sequence

CGACAAGAGGGAGACCTTAGTCATTCGGGCGGCAAGATTTGGGGGCAGAGAGAGAGAGAGAGCAATGGAGCCGTTCGTGAATGCGTTCTCAGTATTGGAGCTCGATGCTGAAGACGATCAAGTTCGTCCTCCTTCTACTTTCTCCAAAGACGAGGCTGCCGCTTCTTCCTCTTCAAGAACAGGAAAAAGCAAGAAGGAAAACATCTCTGGTGATATTCTGATGGGAGAAAGACAGAAACAAAGTCAACCAGATGTAGCTGCAGAAGACTACAAGTTTCCACTTGTTTGGATTGACCTGGAAATGACTGGTTTAAATGTAGAAACAGATAGAATACTGGAGATAGCTTGTATAATTACCAATGGAAGTCTGACCAAATTGGTTGAGGGTCCTCATCTAGTTATTCACCAATCAAAAGAATGTCTTGAAAAAATGGGAGAATGGTGTCAAAGTCATCACGCAGCCAGTGGATTGACAAAAAAAGTGCTACAAAGTACAATTAGTGAACGAGAAGCTGAAAAACAGGTTATAGAATTTGTGAAGAAACATGTTGGTAGCTATACTCTACATTTGGCTGGAAATTCAGTCTATGTGGATTTTATTTTTTTGAAGAAATACATGCCAGATTTGGCTGGACTTTTTTCGCACGTACTTGTTGACGTCAGTAGTGTTAAGGCTCTATGCTTTCGCTGGTTTCCAAGAGATCAGAAGAAAGCTCCACCGAAGGAGAATAAACATAGGGCTATGGATGATATCAGAGAAAGCATAATGGAACTCAAATACTACAAGGAAAATATATTTAAGAAGCCTAAAAAGTGACGCAGGAGGAGGAGGAGGCACCACAACCACAAGACTACATGTCTGTACGTTGCTGGATTCATTGCTTGGAGAGCCTTCATGGTATCAAATACATTGTGTTGATTGATTAACTGCTTGCTGGATTCATTGCTTGGAGAGCCTCCATGGTATCTAATACATTGTGTTCATTAACTGCTTTCAAATCCAAACATACTTGCGGATCCAAGAGTTTGTAGATCATCTATGTTAGAATTTATTTTCTTTATATTCTATTGGGTATATATAATTTAATCTTTTATCTATTTGAAATGGTCACTTGTTCGATGCCATTACTATATGTTTCTATAAACTATTTTTTTCTCCGTGTTATCTTGTATATAGCTCAACTCGTTAAAAAATTGATATCTCTTTGAACGAATAG

Coding sequence (CDS)

ATGGAGCCGTTCGTGAATGCGTTCTCAGTATTGGAGCTCGATGCTGAAGACGATCAAGTTCGTCCTCCTTCTACTTTCTCCAAAGACGAGGCTGCCGCTTCTTCCTCTTCAAGAACAGGAAAAAGCAAGAAGGAAAACATCTCTGGTGATATTCTGATGGGAGAAAGACAGAAACAAAGTCAACCAGATGTAGCTGCAGAAGACTACAAGTTTCCACTTGTTTGGATTGACCTGGAAATGACTGGTTTAAATGTAGAAACAGATAGAATACTGGAGATAGCTTGTATAATTACCAATGGAAGTCTGACCAAATTGGTTGAGGGTCCTCATCTAGTTATTCACCAATCAAAAGAATGTCTTGAAAAAATGGGAGAATGGTGTCAAAGTCATCACGCAGCCAGTGGATTGACAAAAAAAGTGCTACAAAGTACAATTAGTGAACGAGAAGCTGAAAAACAGGTTATAGAATTTGTGAAGAAACATGTTGGTAGCTATACTCTACATTTGGCTGGAAATTCAGTCTATGTGGATTTTATTTTTTTGAAGAAATACATGCCAGATTTGGCTGGACTTTTTTCGCACGTACTTGTTGACGTCAGTAGTGTTAAGGCTCTATGCTTTCGCTGGTTTCCAAGAGATCAGAAGAAAGCTCCACCGAAGGAGAATAAACATAGGGCTATGGATGATATCAGAGAAAGCATAATGGAACTCAAATACTACAAGGAAAATATATTTAAGAAGCCTAAAAAGTGA

Protein sequence

MEPFVNAFSVLELDAEDDQVRPPSTFSKDEAAASSSSRTGKSKKENISGDILMGERQKQSQPDVAAEDYKFPLVWIDLEMTGLNVETDRILEIACIITNGSLTKLVEGPHLVIHQSKECLEKMGEWCQSHHAASGLTKKVLQSTISEREAEKQVIEFVKKHVGSYTLHLAGNSVYVDFIFLKKYMPDLAGLFSHVLVDVSSVKALCFRWFPRDQKKAPPKENKHRAMDDIRESIMELKYYKENIFKKPKK
Homology
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BLAST of Cp4.1LG05g05370 vs. Swiss-Prot
Match: ORN_ARATH (Oligoribonuclease OS=Arabidopsis thaliana GN=At2g26970 PE=2 SV=2)

HSP 1 Score: 296.6 bits (758), Expect = 2.6e-79
Identity = 157/246 (63.82%), Postives = 185/246 (75.20%), Query Frame = 1 

Query: 1   MEPFVNAFSVLELDAEDDQVRPPSTFSKDEAAASSSSRTGKSKKENISGDILMGERQKQS 60
           M    NAFSVL              F+ ++A  +SSS TGK ++E+++G +  G      
Sbjct: 1   MNKLSNAFSVL-------------AFADEDAPMASSSSTGK-QEESVNGSLEDG------ 60

Query: 61  QPDVAAEDYKFPLVWIDLEMTGLNVETDRILEIACIITNGSLTKLVEGPHLVIHQSKECL 120
                  DYK PLVWIDLEMTGLNVE DRILEIACIITNG LT+ VEGP LV+ Q+K+CL
Sbjct: 61  -------DYKQPLVWIDLEMTGLNVEVDRILEIACIITNGDLTQSVEGPDLVVRQTKDCL 120

Query: 121 EKMGEWCQSHHAASGLTKKVLQSTISEREAEKQVIEFVKKHVGSYTLHLAGNSVYVDFIF 180
           +KM +WCQ+HH ASGLTKKVL S I+EREAE++VIEFVKKHVGS    LAGNSVYVDF+F
Sbjct: 121 DKMDDWCQTHHGASGLTKKVLLSAITEREAEQKVIEFVKKHVGSGNPLLAGNSVYVDFLF 180

Query: 181 LKKYMPDLAGLFSHVLVDVSSVKALCFRWFPRDQKKAPPKENKHRAMDDIRESIMELKYY 240
           LKKYMP+LA LF H+LVDVSSVKALC RWFP +++KAP K+N HRAMDDIRESI ELKYY
Sbjct: 181 LKKYMPELAALFPHILVDVSSVKALCARWFPIERRKAPAKKNNHRAMDDIRESIKELKYY 219

Query: 241 KENIFK 247
           K+ IFK
Sbjct: 241 KKTIFK 219

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BLAST of Cp4.1LG05g05370 vs. Swiss-Prot
Match: ORN_HUMAN (Oligoribonuclease, mitochondrial OS=Homo sapiens GN=REXO2 PE=1 SV=3)

HSP 1 Score: 187.2 bits (474), Expect = 2.2e-46
Identity = 90/183 (49.18%), Postives = 124/183 (67.76%), Query Frame = 1 

Query: 65  AAEDYKFPLVWIDLEMTGLNVETDRILEIACIITNGSLTKLVEGPHLVIHQSKECLEKMG 124
           A E     +VW+DLEMTGL++E D+I+E+AC+IT+  L  L EGP+L+I Q  E L+ M 
Sbjct: 35  AGESMAQRMVWVDLEMTGLDIEKDQIIEMACLITDSDLNILAEGPNLIIKQPDELLDSMS 94

Query: 125 EWCQSHHAASGLTKKVLQSTISEREAEKQVIEFVKKHVGSYTLHLAGNSVYVDFIFLKKY 184
           +WC+ HH  SGLTK V +STI+ ++AE + + FV++        LAGNSV+ D  FL KY
Sbjct: 95  DWCKEHHGKSGLTKAVKESTITLQQAEYEFLSFVRQQTPPGLCPLAGNSVHEDKKFLDKY 154

Query: 185 MPDLAGLFSHVLVDVSSVKALCFRWFPRDQKKAPPKENKHRAMDDIRESIMELKYYKENI 244
           MP       + ++DVS+VK LC RW+P + + AP K   HRA+DDI ESI EL++Y+ NI
Sbjct: 155 MPQFMKHLHYRIIDVSTVKELCRRWYPEEYEFAPKKAASHRALDDISESIKELQFYRNNI 214

Query: 245 FKK 248
           FKK
Sbjct: 215 FKK 217

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BLAST of Cp4.1LG05g05370 vs. Swiss-Prot
Match: ORN_MOUSE (Oligoribonuclease, mitochondrial OS=Mus musculus GN=Rexo2 PE=1 SV=2)

HSP 1 Score: 187.2 bits (474), Expect = 2.2e-46
Identity = 89/183 (48.63%), Postives = 124/183 (67.76%), Query Frame = 1 

Query: 65  AAEDYKFPLVWIDLEMTGLNVETDRILEIACIITNGSLTKLVEGPHLVIHQSKECLEKMG 124
           A E     +VW+DLEMTGL++E D+I+E+AC+IT+  L  L EGP+L+I Q  E L+ M 
Sbjct: 35  AGESMAQRMVWVDLEMTGLDIEKDQIIEMACLITDSDLNILAEGPNLIIKQPDELLDSMS 94

Query: 125 EWCQSHHAASGLTKKVLQSTISEREAEKQVIEFVKKHVGSYTLHLAGNSVYVDFIFLKKY 184
           +WC+ HH  SGLTK V +ST++ ++AE + + FV++        LAGNSV+ D  FL K+
Sbjct: 95  DWCKEHHGKSGLTKAVKESTVTLQQAEYEFLSFVRQQTPPGLCPLAGNSVHADKKFLDKH 154

Query: 185 MPDLAGLFSHVLVDVSSVKALCFRWFPRDQKKAPPKENKHRAMDDIRESIMELKYYKENI 244
           MP       + ++DVS+VK LC RW+P D + AP K   HRA+DDI ESI EL++Y+ NI
Sbjct: 155 MPQFMKHLHYRIIDVSTVKELCRRWYPEDYEFAPKKAASHRALDDISESIKELQFYRNNI 214

Query: 245 FKK 248
           FKK
Sbjct: 215 FKK 217

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BLAST of Cp4.1LG05g05370 vs. Swiss-Prot
Match: ORN_RAT (Oligoribonuclease, mitochondrial OS=Rattus norvegicus GN=Rexo2 PE=2 SV=1)

HSP 1 Score: 187.2 bits (474), Expect = 2.2e-46
Identity = 89/183 (48.63%), Postives = 124/183 (67.76%), Query Frame = 1 

Query: 65  AAEDYKFPLVWIDLEMTGLNVETDRILEIACIITNGSLTKLVEGPHLVIHQSKECLEKMG 124
           A E     +VW+DLEMTGL++E D+I+E+AC+IT+  L  L EGP+L+I Q  E L+ M 
Sbjct: 35  AGESMAQRMVWVDLEMTGLDIEKDQIIEMACLITDSDLNILAEGPNLIIKQPDELLDSMS 94

Query: 125 EWCQSHHAASGLTKKVLQSTISEREAEKQVIEFVKKHVGSYTLHLAGNSVYVDFIFLKKY 184
           +WC+ HH  SGLTK V +ST++ ++AE + + FV++        LAGNSV+ D  FL K+
Sbjct: 95  DWCKEHHGKSGLTKAVKESTVTLQQAEYEFLSFVRQQTPPGLCPLAGNSVHADKKFLDKH 154

Query: 185 MPDLAGLFSHVLVDVSSVKALCFRWFPRDQKKAPPKENKHRAMDDIRESIMELKYYKENI 244
           MP       + ++DVS+VK LC RW+P D + AP K   HRA+DDI ESI EL++Y+ NI
Sbjct: 155 MPQFMKHLHYRIIDVSTVKELCRRWYPEDYEFAPKKAASHRALDDISESIKELQFYRNNI 214

Query: 245 FKK 248
           FKK
Sbjct: 215 FKK 217

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BLAST of Cp4.1LG05g05370 vs. Swiss-Prot
Match: ORN_BOVIN (Oligoribonuclease, mitochondrial OS=Bos taurus GN=REXO2 PE=2 SV=1)

HSP 1 Score: 186.8 bits (473), Expect = 2.9e-46
Identity = 89/183 (48.63%), Postives = 124/183 (67.76%), Query Frame = 1 

Query: 65  AAEDYKFPLVWIDLEMTGLNVETDRILEIACIITNGSLTKLVEGPHLVIHQSKECLEKMG 124
           A E     +VW+DLEMTGL++E D+I+E+AC+IT+  L  L EGP+L+I Q  E L+ M 
Sbjct: 35  AGESMAQRMVWVDLEMTGLDIEKDQIIEMACLITDSDLNILAEGPNLIIKQPDELLDSMS 94

Query: 125 EWCQSHHAASGLTKKVLQSTISEREAEKQVIEFVKKHVGSYTLHLAGNSVYVDFIFLKKY 184
           +WC+ HH  SGLTK V +ST++ ++AE + + FV++        LAGNSV+ D  FL KY
Sbjct: 95  DWCKEHHGKSGLTKAVKESTMTLQQAEYEFLSFVRQQTPPGLCPLAGNSVHADKKFLDKY 154

Query: 185 MPDLAGLFSHVLVDVSSVKALCFRWFPRDQKKAPPKENKHRAMDDIRESIMELKYYKENI 244
           MP       + ++DVS+VK LC RW+P + + AP K   HRA+DDI ESI EL++Y+ NI
Sbjct: 155 MPQFMKHLHYRIIDVSTVKELCRRWYPEEYEFAPKKAASHRALDDISESIKELQFYRNNI 214

Query: 245 FKK 248
           FKK
Sbjct: 215 FKK 217

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BLAST of Cp4.1LG05g05370 vs. TrEMBL
Match: A0A0A0KZ28_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_4G279830 PE=4 SV=1)

HSP 1 Score: 418.7 bits (1075), Expect = 5.0e-114
Identity = 213/251 (84.86%), Postives = 227/251 (90.44%), Query Frame = 1 

Query: 1   MEPFVNAFSVLELDAEDDQVRPPSTFSKDEAAASSSSRTGKSKKE-NISGDILMGERQKQ 60
           M+P VNAFS+LELDAEDDQ+   ST SKD+A  S  S TGK KKE NISGDIL GERQKQ
Sbjct: 3   MKPLVNAFSLLELDAEDDQIPALSTSSKDDATVSYPSPTGKRKKEVNISGDILTGERQKQ 62

Query: 61  SQPDVAAEDYKFPLVWIDLEMTGLNVETDRILEIACIITNGSLTKLVEGPHLVIHQSKEC 120
            QP+  AEDYKFPLVWIDLEMTGLNVETDRILEIACIITNG+LTKLVEGP LVIHQSKEC
Sbjct: 63  GQPNAVAEDYKFPLVWIDLEMTGLNVETDRILEIACIITNGNLTKLVEGPDLVIHQSKEC 122

Query: 121 LEKMGEWCQSHHAASGLTKKVLQSTISEREAEKQVIEFVKKHVGSYTLHLAGNSVYVDFI 180
           L+KMGEWCQSHHAASGLTKKVL+STISEREAEKQVI+FVKKHV +  LHLAGNSVY+DFI
Sbjct: 123 LDKMGEWCQSHHAASGLTKKVLRSTISEREAEKQVIQFVKKHVCTDKLHLAGNSVYMDFI 182

Query: 181 FLKKYMPDLAGLFSHVLVDVSSVKALCFRWFPRDQKKAPPKENKHRAMDDIRESIMELKY 240
           FLKKYMPDLAGLFSHVLVDVSS+K LC RW+PRD+KKAPPKENKHRAMDDIRESIMELKY
Sbjct: 183 FLKKYMPDLAGLFSHVLVDVSSIKTLCDRWYPRDRKKAPPKENKHRAMDDIRESIMELKY 242

Query: 241 YKENIFKKPKK 251
           YKENIFK  KK
Sbjct: 243 YKENIFKNSKK 253

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BLAST of Cp4.1LG05g05370 vs. TrEMBL
Match: A0A067KFX9_JATCU (Uncharacterized protein OS=Jatropha curcas GN=JCGZ_10670 PE=4 SV=1)

HSP 1 Score: 346.7 bits (888), Expect = 2.4e-92
Identity = 177/256 (69.14%), Postives = 209/256 (81.64%), Query Frame = 1 

Query: 1   MEPFVNAFSVLELDAEDDQV---RPPSTFSKDEAAASSSSRTGKSKKE---NISGDILMG 60
           M+   NAFSVL+LDAEDDQV     PS  +  +A   S++ T  S+ +   ++SG  L  
Sbjct: 1   MDYLSNAFSVLDLDAEDDQVDVVASPSISTSSKATPVSTNNTESSRNKLNGSVSGLGLEK 60

Query: 61  ERQKQSQPDVAAEDYKFPLVWIDLEMTGLNVETDRILEIACIITNGSLTKLVEGPHLVIH 120
           E+Q +     ++  YK PLVWID+EMTGLN+E DRILEIACIIT+G+LTK VEGP L+IH
Sbjct: 61  EKQHEQNLVTSSTAYKMPLVWIDMEMTGLNIEVDRILEIACIITDGNLTKSVEGPDLIIH 120

Query: 121 QSKECLEKMGEWCQSHHAASGLTKKVLQSTISEREAEKQVIEFVKKHVGSYTLHLAGNSV 180
           QSKECL++MGEWCQSHHAASGLT KVLQS++SEREAEKQVIEFVK+H+G+YT  LAGNSV
Sbjct: 121 QSKECLDQMGEWCQSHHAASGLTDKVLQSSVSEREAEKQVIEFVKRHIGTYTPLLAGNSV 180

Query: 181 YVDFIFLKKYMPDLAGLFSHVLVDVSSVKALCFRWFPRDQKKAPPKENKHRAMDDIRESI 240
           YVDF+FLKKY+PDLA LFSHV+VDVSSVKALC RW+PRDQK+APPKENKHRAMDDIRES+
Sbjct: 181 YVDFLFLKKYLPDLASLFSHVVVDVSSVKALCIRWYPRDQKRAPPKENKHRAMDDIRESV 240

Query: 241 MELKYYKENIFKKPKK 251
            ELKYYKENIFK   K
Sbjct: 241 RELKYYKENIFKARSK 256

[Close]
BLAST of Cp4.1LG05g05370 vs. TrEMBL
Match: M5X808_PRUPE (Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa010434mg PE=4 SV=1)

HSP 1 Score: 346.7 bits (888), Expect = 2.4e-92
Identity = 184/252 (73.02%), Postives = 204/252 (80.95%), Query Frame = 1 

Query: 1   MEPFVNAFSVLELDAEDD-QVRPPSTFSKDEAAASSSSRTGKSKKENISGDILM-GERQK 60
           ME   NAFSVLELDAEDD Q R  S+ SK++   + SS     KK N S +IL+  E++ 
Sbjct: 1   MEDLANAFSVLELDAEDDDQAREASSVSKNKDDTTKSSGKKTEKKVNNSDNILLVKEKET 60

Query: 61  QSQPDVAAEDYKFPLVWIDLEMTGLNVETDRILEIACIITNGSLTKLVEGPHLVIHQSKE 120
           Q +P    E YK PLVWIDLEMTGLNVE DRILEIACIIT+G LTK VEGP LVIHQ+KE
Sbjct: 61  QQKP---LEKYKLPLVWIDLEMTGLNVEVDRILEIACIITDGKLTKSVEGPDLVIHQTKE 120

Query: 121 CLEKMGEWCQSHHAASGLTKKVLQSTISEREAEKQVIEFVKKHVGSYTLHLAGNSVYVDF 180
           CL++MGEWCQSHH ASGLTKKVL+STISEREAEKQVIEFV ++VG+YT  LAGNSVYVDF
Sbjct: 121 CLDRMGEWCQSHHEASGLTKKVLESTISEREAEKQVIEFVTRNVGTYTPQLAGNSVYVDF 180

Query: 181 IFLKKYMPDLAGLFSHVLVDVSSVKALCFRWFPRDQKKAPPKENKHRAMDDIRESIMELK 240
            FLKKYMPDLA LFSHV+VDVSSVKALC RW+PRD + AP KEN HRAMDDIRESI ELK
Sbjct: 181 AFLKKYMPDLASLFSHVIVDVSSVKALCIRWYPRDNRNAPSKENNHRAMDDIRESIRELK 240

Query: 241 YYKENIFKKPKK 251
           YYKENIFK  KK
Sbjct: 241 YYKENIFKAFKK 249

[Close]
BLAST of Cp4.1LG05g05370 vs. TrEMBL
Match: W9RGV3_9ROSA (Uncharacterized protein OS=Morus notabilis GN=L484_022507 PE=4 SV=1)

HSP 1 Score: 346.3 bits (887), Expect = 3.2e-92
Identity = 180/251 (71.71%), Postives = 202/251 (80.48%), Query Frame = 1 

Query: 1   MEPFVNAFSVLELDA-EDDQVRPPSTFSKDEAAASSSSRTGKSKKENISGDILMGERQKQ 60
           ME   NAFSVL LDA +DDQ R  S+ +  +A   +S+ +G   KE  S  I+   +  Q
Sbjct: 1   MERLANAFSVLVLDAPDDDQARTASSSADSKAKVCASADSGVEDKEAKSTAIVEKHKNNQ 60

Query: 61  SQPDVAAEDYKFPLVWIDLEMTGLNVETDRILEIACIITNGSLTKLVEGPHLVIHQSKEC 120
              D    +YK PLVWIDLEMTGL+VE DRILEIACIIT+G+LTK VEGP LVIHQSKEC
Sbjct: 61  QNLDTPPAEYKLPLVWIDLEMTGLDVEVDRILEIACIITDGNLTKSVEGPDLVIHQSKEC 120

Query: 121 LEKMGEWCQSHHAASGLTKKVLQSTISEREAEKQVIEFVKKHVGSYTLHLAGNSVYVDFI 180
           L++MGEWCQSHHAASGLTKKVL ST+ EREAEKQVIEFVKK+VG+YT HLAGNSVY+DFI
Sbjct: 121 LDQMGEWCQSHHAASGLTKKVLHSTMIEREAEKQVIEFVKKNVGTYTPHLAGNSVYMDFI 180

Query: 181 FLKKYMPDLAGLFSHVLVDVSSVKALCFRWFPRDQKKAPPKENKHRAMDDIRESIMELKY 240
           FLKKYMPDLA LFSHV+VDVSSVKALC RW+PRDQKKAP KE KHRAMDDIRESI ELKY
Sbjct: 181 FLKKYMPDLASLFSHVVVDVSSVKALCIRWYPRDQKKAPAKEGKHRAMDDIRESIKELKY 240

Query: 241 YKENIFKKPKK 251
           YKE+IFK   K
Sbjct: 241 YKESIFKSKSK 251

[Close]
BLAST of Cp4.1LG05g05370 vs. TrEMBL
Match: A0A0D2RR44_GOSRA (Uncharacterized protein OS=Gossypium raimondii GN=B456_004G001600 PE=4 SV=1)

HSP 1 Score: 342.4 bits (877), Expect = 4.6e-91
Identity = 174/250 (69.60%), Postives = 203/250 (81.20%), Query Frame = 1 

Query: 1   MEPFVNAFSVLELDAEDDQVRPPSTFSKDEAAASSSSRTGKSKKENISGDILMGERQKQS 60
           M+   NAFS+L++D +D    P        A++S+S  +GKSK        + G+   + 
Sbjct: 1   MDRLSNAFSLLDIDVDDHHPPP--------ASSSASKPSGKSK--------INGKGSTEL 60

Query: 61  QPDVAAEDYKFPLVWIDLEMTGLNVETDRILEIACIITNGSLTKLVEGPHLVIHQSKECL 120
           +P + +E+YK PLVWIDLEMTGLN+ETDRILEIACIIT+G LTK +EGP LVIHQSKECL
Sbjct: 61  KPALLSENYKLPLVWIDLEMTGLNIETDRILEIACIITDGYLTKSLEGPDLVIHQSKECL 120

Query: 121 EKMGEWCQSHHAASGLTKKVLQSTISEREAEKQVIEFVKKHVGSYTLHLAGNSVYVDFIF 180
           ++MGEWCQ+HHAASGLTKKVLQSTISEREAEKQVIEFVK+HVG+YT HLAGNSVY+DFIF
Sbjct: 121 DRMGEWCQNHHAASGLTKKVLQSTISEREAEKQVIEFVKRHVGTYTPHLAGNSVYMDFIF 180

Query: 181 LKKYMPDLAGLFSHVLVDVSSVKALCFRWFPRDQKKAPPKENKHRAMDDIRESIMELKYY 240
           LKKYMPDLA LFSHV+VDVSSV+ALC RW+PRDQKKAP KE KHRAMDDIRESI ELKY+
Sbjct: 181 LKKYMPDLASLFSHVVVDVSSVRALCIRWYPRDQKKAPAKEKKHRAMDDIRESISELKYF 234

Query: 241 KENIFKKPKK 251
           KE IFK   K
Sbjct: 241 KETIFKAKSK 234

[Close]
BLAST of Cp4.1LG05g05370 vs. TAIR10
Match: AT2G26970.1 (AT2G26970.1 Polynucleotidyl transferase, ribonuclease H-like superfamily protein)

HSP 1 Score: 296.6 bits (758), Expect = 1.4e-80
Identity = 157/246 (63.82%), Postives = 185/246 (75.20%), Query Frame = 1 

Query: 1   MEPFVNAFSVLELDAEDDQVRPPSTFSKDEAAASSSSRTGKSKKENISGDILMGERQKQS 60
           M    NAFSVL              F+ ++A  +SSS TGK ++E+++G +  G      
Sbjct: 1   MNKLSNAFSVL-------------AFADEDAPMASSSSTGK-QEESVNGSLEDG------ 60

Query: 61  QPDVAAEDYKFPLVWIDLEMTGLNVETDRILEIACIITNGSLTKLVEGPHLVIHQSKECL 120
                  DYK PLVWIDLEMTGLNVE DRILEIACIITNG LT+ VEGP LV+ Q+K+CL
Sbjct: 61  -------DYKQPLVWIDLEMTGLNVEVDRILEIACIITNGDLTQSVEGPDLVVRQTKDCL 120

Query: 121 EKMGEWCQSHHAASGLTKKVLQSTISEREAEKQVIEFVKKHVGSYTLHLAGNSVYVDFIF 180
           +KM +WCQ+HH ASGLTKKVL S I+EREAE++VIEFVKKHVGS    LAGNSVYVDF+F
Sbjct: 121 DKMDDWCQTHHGASGLTKKVLLSAITEREAEQKVIEFVKKHVGSGNPLLAGNSVYVDFLF 180

Query: 181 LKKYMPDLAGLFSHVLVDVSSVKALCFRWFPRDQKKAPPKENKHRAMDDIRESIMELKYY 240
           LKKYMP+LA LF H+LVDVSSVKALC RWFP +++KAP K+N HRAMDDIRESI ELKYY
Sbjct: 181 LKKYMPELAALFPHILVDVSSVKALCARWFPIERRKAPAKKNNHRAMDDIRESIKELKYY 219

Query: 241 KENIFK 247
           K+ IFK
Sbjct: 241 KKTIFK 219

[Close]
BLAST of Cp4.1LG05g05370 vs. NCBI nr
Match: gi|659097843|ref|XP_008449843.1| (PREDICTED: oligoribonuclease [Cucumis melo])

HSP 1 Score: 419.1 bits (1076), Expect = 5.5e-114
Identity = 216/250 (86.40%), Postives = 225/250 (90.00%), Query Frame = 1 

Query: 2   EPFVNAFSVLELDAEDDQVRPPSTFSKDEAAASSSSRTGKSKKE-NISGDILMGERQKQS 61
           +P VNAFSVLELDAEDDQ+   ST SKD+A  S SS TGKSKKE NISGDI  GERQKQ 
Sbjct: 4   KPLVNAFSVLELDAEDDQIPALSTSSKDDATVSYSSSTGKSKKEVNISGDIPTGERQKQG 63

Query: 62  QPDVAAEDYKFPLVWIDLEMTGLNVETDRILEIACIITNGSLTKLVEGPHLVIHQSKECL 121
           QP+  AEDYKFPLVWIDLEMTGLNVETDRILEIACIITNG+LTKLVEGP LVIHQSKECL
Sbjct: 64  QPNAVAEDYKFPLVWIDLEMTGLNVETDRILEIACIITNGNLTKLVEGPDLVIHQSKECL 123

Query: 122 EKMGEWCQSHHAASGLTKKVLQSTISEREAEKQVIEFVKKHVGSYTLHLAGNSVYVDFIF 181
           EKMGEWCQSHHAASGLTKKV +STISEREAEKQVIEFVKKHV    LHLAGNSVY+DFIF
Sbjct: 124 EKMGEWCQSHHAASGLTKKVQRSTISEREAEKQVIEFVKKHVCCDKLHLAGNSVYMDFIF 183

Query: 182 LKKYMPDLAGLFSHVLVDVSSVKALCFRWFPRDQKKAPPKENKHRAMDDIRESIMELKYY 241
           LKKYMPDLAGLFSHVLVDVSSVK LC RW+PRD+KKAPPKENKHRAMDDIRESIMELKYY
Sbjct: 184 LKKYMPDLAGLFSHVLVDVSSVKTLCDRWYPRDRKKAPPKENKHRAMDDIRESIMELKYY 243

Query: 242 KENIFKKPKK 251
           KENIFK  KK
Sbjct: 244 KENIFKNSKK 253

[Close]
BLAST of Cp4.1LG05g05370 vs. NCBI nr
Match: gi|449448848|ref|XP_004142177.1| (PREDICTED: oligoribonuclease [Cucumis sativus])

HSP 1 Score: 418.7 bits (1075), Expect = 7.2e-114
Identity = 213/251 (84.86%), Postives = 227/251 (90.44%), Query Frame = 1 

Query: 1   MEPFVNAFSVLELDAEDDQVRPPSTFSKDEAAASSSSRTGKSKKE-NISGDILMGERQKQ 60
           M+P VNAFS+LELDAEDDQ+   ST SKD+A  S  S TGK KKE NISGDIL GERQKQ
Sbjct: 3   MKPLVNAFSLLELDAEDDQIPALSTSSKDDATVSYPSPTGKRKKEVNISGDILTGERQKQ 62

Query: 61  SQPDVAAEDYKFPLVWIDLEMTGLNVETDRILEIACIITNGSLTKLVEGPHLVIHQSKEC 120
            QP+  AEDYKFPLVWIDLEMTGLNVETDRILEIACIITNG+LTKLVEGP LVIHQSKEC
Sbjct: 63  GQPNAVAEDYKFPLVWIDLEMTGLNVETDRILEIACIITNGNLTKLVEGPDLVIHQSKEC 122

Query: 121 LEKMGEWCQSHHAASGLTKKVLQSTISEREAEKQVIEFVKKHVGSYTLHLAGNSVYVDFI 180
           L+KMGEWCQSHHAASGLTKKVL+STISEREAEKQVI+FVKKHV +  LHLAGNSVY+DFI
Sbjct: 123 LDKMGEWCQSHHAASGLTKKVLRSTISEREAEKQVIQFVKKHVCTDKLHLAGNSVYMDFI 182

Query: 181 FLKKYMPDLAGLFSHVLVDVSSVKALCFRWFPRDQKKAPPKENKHRAMDDIRESIMELKY 240
           FLKKYMPDLAGLFSHVLVDVSS+K LC RW+PRD+KKAPPKENKHRAMDDIRESIMELKY
Sbjct: 183 FLKKYMPDLAGLFSHVLVDVSSIKTLCDRWYPRDRKKAPPKENKHRAMDDIRESIMELKY 242

Query: 241 YKENIFKKPKK 251
           YKENIFK  KK
Sbjct: 243 YKENIFKNSKK 253

[Close]
BLAST of Cp4.1LG05g05370 vs. NCBI nr
Match: gi|645251547|ref|XP_008231733.1| (PREDICTED: oligoribonuclease [Prunus mume])

HSP 1 Score: 352.4 bits (903), Expect = 6.3e-94
Identity = 182/252 (72.22%), Postives = 206/252 (81.75%), Query Frame = 1 

Query: 1   MEPFVNAFSVLELDAEDD-QVRPPSTFSKDEAAASSSSRTGKSKKENISGDILM-GERQK 60
           ME   NAFSVLELDAEDD Q R  S+ SK++   + SS     KK N S ++L+  E++ 
Sbjct: 1   MEDLANAFSVLELDAEDDDQAREASSVSKNKDDTTKSSGKKMEKKVNNSDNMLLVKEKES 60

Query: 61  QSQPDVAAEDYKFPLVWIDLEMTGLNVETDRILEIACIITNGSLTKLVEGPHLVIHQSKE 120
           Q   ++  E+YK PLVWIDLEMTGLNVE DRILEIACIIT+G LTK VEGP LVIHQ+KE
Sbjct: 61  QQNSEMPLEEYKLPLVWIDLEMTGLNVEVDRILEIACIITDGKLTKSVEGPDLVIHQTKE 120

Query: 121 CLEKMGEWCQSHHAASGLTKKVLQSTISEREAEKQVIEFVKKHVGSYTLHLAGNSVYVDF 180
           CL++MG+WCQSHH ASGLTKKVL+ST+SEREAEKQVIEFVK++VG+YT  LAGNSVYVDF
Sbjct: 121 CLDRMGDWCQSHHKASGLTKKVLESTVSEREAEKQVIEFVKRNVGTYTPQLAGNSVYVDF 180

Query: 181 IFLKKYMPDLAGLFSHVLVDVSSVKALCFRWFPRDQKKAPPKENKHRAMDDIRESIMELK 240
            FLKKYMPDLA  FSHV+VDVSSVKALC RW+PRD KKAP KEN HRAMDDIRESI ELK
Sbjct: 181 AFLKKYMPDLANRFSHVIVDVSSVKALCIRWYPRDNKKAPSKENNHRAMDDIRESIRELK 240

Query: 241 YYKENIFKKPKK 251
           YYKENIFK  KK
Sbjct: 241 YYKENIFKASKK 252

[Close]
BLAST of Cp4.1LG05g05370 vs. NCBI nr
Match: gi|596058227|ref|XP_007221003.1| (hypothetical protein PRUPE_ppa010434mg [Prunus persica])

HSP 1 Score: 346.7 bits (888), Expect = 3.5e-92
Identity = 184/252 (73.02%), Postives = 204/252 (80.95%), Query Frame = 1 

Query: 1   MEPFVNAFSVLELDAEDD-QVRPPSTFSKDEAAASSSSRTGKSKKENISGDILM-GERQK 60
           ME   NAFSVLELDAEDD Q R  S+ SK++   + SS     KK N S +IL+  E++ 
Sbjct: 1   MEDLANAFSVLELDAEDDDQAREASSVSKNKDDTTKSSGKKTEKKVNNSDNILLVKEKET 60

Query: 61  QSQPDVAAEDYKFPLVWIDLEMTGLNVETDRILEIACIITNGSLTKLVEGPHLVIHQSKE 120
           Q +P    E YK PLVWIDLEMTGLNVE DRILEIACIIT+G LTK VEGP LVIHQ+KE
Sbjct: 61  QQKP---LEKYKLPLVWIDLEMTGLNVEVDRILEIACIITDGKLTKSVEGPDLVIHQTKE 120

Query: 121 CLEKMGEWCQSHHAASGLTKKVLQSTISEREAEKQVIEFVKKHVGSYTLHLAGNSVYVDF 180
           CL++MGEWCQSHH ASGLTKKVL+STISEREAEKQVIEFV ++VG+YT  LAGNSVYVDF
Sbjct: 121 CLDRMGEWCQSHHEASGLTKKVLESTISEREAEKQVIEFVTRNVGTYTPQLAGNSVYVDF 180

Query: 181 IFLKKYMPDLAGLFSHVLVDVSSVKALCFRWFPRDQKKAPPKENKHRAMDDIRESIMELK 240
            FLKKYMPDLA LFSHV+VDVSSVKALC RW+PRD + AP KEN HRAMDDIRESI ELK
Sbjct: 181 AFLKKYMPDLASLFSHVIVDVSSVKALCIRWYPRDNRNAPSKENNHRAMDDIRESIRELK 240

Query: 241 YYKENIFKKPKK 251
           YYKENIFK  KK
Sbjct: 241 YYKENIFKAFKK 249

[Close]
BLAST of Cp4.1LG05g05370 vs. NCBI nr
Match: gi|802616771|ref|XP_012075386.1| (PREDICTED: oligoribonuclease [Jatropha curcas])

HSP 1 Score: 346.7 bits (888), Expect = 3.5e-92
Identity = 177/256 (69.14%), Postives = 209/256 (81.64%), Query Frame = 1 

Query: 1   MEPFVNAFSVLELDAEDDQV---RPPSTFSKDEAAASSSSRTGKSKKE---NISGDILMG 60
           M+   NAFSVL+LDAEDDQV     PS  +  +A   S++ T  S+ +   ++SG  L  
Sbjct: 1   MDYLSNAFSVLDLDAEDDQVDVVASPSISTSSKATPVSTNNTESSRNKLNGSVSGLGLEK 60

Query: 61  ERQKQSQPDVAAEDYKFPLVWIDLEMTGLNVETDRILEIACIITNGSLTKLVEGPHLVIH 120
           E+Q +     ++  YK PLVWID+EMTGLN+E DRILEIACIIT+G+LTK VEGP L+IH
Sbjct: 61  EKQHEQNLVTSSTAYKMPLVWIDMEMTGLNIEVDRILEIACIITDGNLTKSVEGPDLIIH 120

Query: 121 QSKECLEKMGEWCQSHHAASGLTKKVLQSTISEREAEKQVIEFVKKHVGSYTLHLAGNSV 180
           QSKECL++MGEWCQSHHAASGLT KVLQS++SEREAEKQVIEFVK+H+G+YT  LAGNSV
Sbjct: 121 QSKECLDQMGEWCQSHHAASGLTDKVLQSSVSEREAEKQVIEFVKRHIGTYTPLLAGNSV 180

Query: 181 YVDFIFLKKYMPDLAGLFSHVLVDVSSVKALCFRWFPRDQKKAPPKENKHRAMDDIRESI 240
           YVDF+FLKKY+PDLA LFSHV+VDVSSVKALC RW+PRDQK+APPKENKHRAMDDIRES+
Sbjct: 181 YVDFLFLKKYLPDLASLFSHVVVDVSSVKALCIRWYPRDQKRAPPKENKHRAMDDIRESV 240

Query: 241 MELKYYKENIFKKPKK 251
            ELKYYKENIFK   K
Sbjct: 241 RELKYYKENIFKARSK 256

The following BLAST results are available for this feature:
BLAST of Cp4.1LG05g05370 vs. Swiss-Prot
Match NameE-valueIdentityDescription
ORN_ARATH2.6e-7963.82Oligoribonuclease OS=Arabidopsis thaliana GN=At2g26970 PE=2 SV=2[more]
ORN_HUMAN2.2e-4649.18Oligoribonuclease, mitochondrial OS=Homo sapiens GN=REXO2 PE=1 SV=3[more]
ORN_MOUSE2.2e-4648.63Oligoribonuclease, mitochondrial OS=Mus musculus GN=Rexo2 PE=1 SV=2[more]
ORN_RAT2.2e-4648.63Oligoribonuclease, mitochondrial OS=Rattus norvegicus GN=Rexo2 PE=2 SV=1[more]
ORN_BOVIN2.9e-4648.63Oligoribonuclease, mitochondrial OS=Bos taurus GN=REXO2 PE=2 SV=1[more]
BLAST of Cp4.1LG05g05370 vs. TrEMBL
Match NameE-valueIdentityDescription
A0A0A0KZ28_CUCSA5.0e-11484.86Uncharacterized protein OS=Cucumis sativus GN=Csa_4G279830 PE=4 SV=1[more]
A0A067KFX9_JATCU2.4e-9269.14Uncharacterized protein OS=Jatropha curcas GN=JCGZ_10670 PE=4 SV=1[more]
M5X808_PRUPE2.4e-9273.02Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa010434mg PE=4 SV=1[more]
W9RGV3_9ROSA3.2e-9271.71Uncharacterized protein OS=Morus notabilis GN=L484_022507 PE=4 SV=1[more]
A0A0D2RR44_GOSRA4.6e-9169.60Uncharacterized protein OS=Gossypium raimondii GN=B456_004G001600 PE=4 SV=1[more]
BLAST of Cp4.1LG05g05370 vs. TAIR10
Match NameE-valueIdentityDescription
AT2G26970.11.4e-8063.82 Polynucleotidyl transferase, ribonuclease H-like superfamily protein[more]
BLAST of Cp4.1LG05g05370 vs. NCBI nr
Match NameE-valueIdentityDescription
gi|659097843|ref|XP_008449843.1|5.5e-11486.40PREDICTED: oligoribonuclease [Cucumis melo][more]
gi|449448848|ref|XP_004142177.1|7.2e-11484.86PREDICTED: oligoribonuclease [Cucumis sativus][more]
gi|645251547|ref|XP_008231733.1|6.3e-9472.22PREDICTED: oligoribonuclease [Prunus mume][more]
gi|596058227|ref|XP_007221003.1|3.5e-9273.02hypothetical protein PRUPE_ppa010434mg [Prunus persica][more]
gi|802616771|ref|XP_012075386.1|3.5e-9269.14PREDICTED: oligoribonuclease [Jatropha curcas][more]
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: Molecular Function
TermDefinition
GO:0003676nucleic acid binding
Vocabulary: INTERPRO
TermDefinition
IPR013520Exonuclease_RNaseT/DNA_pol3
IPR012337RNaseH-like_sf
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0090305 nucleic acid phosphodiester bond hydrolysis
biological_process GO:0090503 RNA phosphodiester bond hydrolysis, exonucleolytic
biological_process GO:0008150 biological_process
cellular_component GO:0005575 cellular_component
molecular_function GO:0004527 exonuclease activity
molecular_function GO:0003676 nucleic acid binding
molecular_function GO:0016740 transferase activity
molecular_function GO:0000175 3'-5'-exoribonuclease activity
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Cp4.1LG05g05370.1Cp4.1LG05g05370.1mRNA


InterPro
Analysis Name: InterPro Annotations of Cucurbita pepo
Date Performed: 2017-12-02
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR012337Ribonuclease H-like domainGENE3DG3DSA:3.30.420.10coord: 70..246
score: 1.8
IPR012337Ribonuclease H-like domainunknownSSF53098Ribonuclease H-likecoord: 71..246
score: 2.68
IPR013520Exonuclease, RNase T/DNA polymerase IIIPFAMPF00929RNase_Tcoord: 74..235
score: 1.0
IPR013520Exonuclease, RNase T/DNA polymerase IIISMARTSM00479exoiiienduscoord: 72..246
score: 4.0
NoneNo IPR availablePANTHERPTHR11046OLIGORIBONUCLEASE, MITOCHONDRIALcoord: 1..246
score: 4.2E
NoneNo IPR availablePANTHERPTHR11046:SF4SUBFAMILY NOT NAMEDcoord: 1..246
score: 4.2E

Synteny
The following gene(s) are orthologous to this gene:
GeneOrthologueOrganismBlock
Cp4.1LG05g05370Cucsa.153050Cucumber (Gy14) v1cgycpeB0410
Cp4.1LG05g05370CmaCh02G011950Cucurbita maxima (Rimu)cmacpeB646
Cp4.1LG05g05370CmoCh02G012270Cucurbita moschata (Rifu)cmocpeB595
Cp4.1LG05g05370Cla003154Watermelon (97103) v1cpewmB723
Cp4.1LG05g05370Csa4G279830Cucumber (Chinese Long) v2cpecuB728
Cp4.1LG05g05370MELO3C014695Melon (DHL92) v3.5.1cpemeB696
Cp4.1LG05g05370ClCG02G024120Watermelon (Charleston Gray)cpewcgB644
Cp4.1LG05g05370CSPI04G12850Wild cucumber (PI 183967)cpecpiB730
Cp4.1LG05g05370Lsi10G009540Bottle gourd (USVL1VR-Ls)cpelsiB598
Cp4.1LG05g05370MELO3C014695.2Melon (DHL92) v3.6.1cpemedB829
Cp4.1LG05g05370CsaV3_4G023210Cucumber (Chinese Long) v3cpecucB0908
Cp4.1LG05g05370Bhi10G000361Wax gourdcpewgoB0944
Cp4.1LG05g05370CsGy4G012420Cucumber (Gy14) v2cgybcpeB561
Cp4.1LG05g05370Carg02763Silver-seed gourdcarcpeB1283
The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:
GeneOrganismBlock
Cp4.1LG05g05370Cucurbita pepo (Zucchini)cpecpeB310
Cp4.1LG05g05370Cucurbita pepo (Zucchini)cpecpeB369
Cp4.1LG05g05370Cucumber (Gy14) v1cgycpeB0386
Cp4.1LG05g05370Cucurbita maxima (Rimu)cmacpeB098
Cp4.1LG05g05370Cucurbita maxima (Rimu)cmacpeB586
Cp4.1LG05g05370Cucurbita moschata (Rifu)cmocpeB074
Cp4.1LG05g05370Cucurbita moschata (Rifu)cmocpeB535
Cp4.1LG05g05370Wild cucumber (PI 183967)cpecpiB705
Cp4.1LG05g05370Cucumber (Chinese Long) v2cpecuB703
Cp4.1LG05g05370Cucumber (Gy14) v2cgybcpeB137
Cp4.1LG05g05370Silver-seed gourdcarcpeB0658
Cp4.1LG05g05370Silver-seed gourdcarcpeB0741
Cp4.1LG05g05370Cucumber (Chinese Long) v3cpecucB0877