Cp4.1LG03g07730 (gene) Cucurbita pepo (Zucchini) | Cucurbit Genomics Database (CuGenDB)

Overview


Name	Cp4.1LG03g07730
Type	gene
Organism	Cucurbita pepo (Cucurbita pepo (Zucchini))
Description	Unknown protein
Location	Cp4.1LG03 : 3133337 .. 3138932 (-)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

CATACACTTGGAGGAAAATGATTAGAGAGCAACTCAAGGGCTCAAACGTTATGGCGCTAAACGAAAATCAAAAGCTATTTCTCTCCCTAATTAACGAATACGCGGCCGAAAAATCGCAAGGAGGTATTTCTATGAAAGAACGATGTTAAATCCTTAGAAAATGTTCTTTTCAAAATGCTAGCGTTTGATACTGTATTCCGATCAGATTTGTAGTTGAATATTCGTGATTGTAGAGGAATTTCTGATGATAAGGAGGTATTTCTACGTAAGAACAAATGTTAGAATCATAATGCTAGCAATTTTTACTGTATTTGATCAAACTTGTTTCGGAAAGGCAAATCTCTGGTTGAGTATTGGCGATTCTACCAGAATCTAGGTTGATGAGGAGGTATTTATATGCTTGAACACTGTCGAATCCCTGAAAAATGTTGTAATCGAAATGCTAGCAATGATTACTCTGTTCGATCAGACTTGTTTCCTAAAAGTAATCGTCTGATTAAAGTATTCGCGATTGTACTAGAATTTATTATGAAATTTGACGAACTTAACGATGCAATTCTTTAATTCTTTCCTTTCGCGAAGAAGTTTTAAGGAATCTTATTCGTATTTTTATCAATGCAGAGCAAAGCGTTGTTGTTTTGAAGAAGAGAACGGAAGAACTGCGATCTGAGCTGGAAGTGGCTAATGTGGAGCTCGAAAATGTCAAGCGCGTCAAAGAAACCACTGAACAAGAGCTTAAAGGCTGTGAAGTCGAATTGTCTCTGAATGAGACTGCAATTCAGACTCTCGAAGTACTATTTCTATTTCTCTTACATTTCACTTTTATAATTGCATCACCGTTAATTGTTCTTTTGCTTCTTAAATTTAATTTATCCACTCCAGGCAAGAATCTCCGTGCTGCAAGGTGAAATTGCATCTGTTGGATCTGAGTTAGACTCTCTGAAGGTACTGAGTTGAGTAACTTATTTATTAAATTGCATCTGTCTCGTATTGTTATTCTCACACTCTCTTGATTCTCTTCAAAACATACTGGGATATGGAATCCTGCCGCTGGACCATAAAAGGTTGAAGGAGGAGCCACGAGGTTGATAATCGTCTATCTTTTGTACTTTACATTCAATTTAAATAGAATAAAATTCTTAGTGAAGTGTAATTCAATGGCTTAGATTACTATGGAAGTGATGAGATCTTATTGGCCATGCAGGGACCAGTTTATCAATCACCTTTTAGACCTTAATAAAAAAATCAGGTCCGTCTTCTAGTTTAATGCAAGCCACTTGCACTGTGAATCCGTGCACATATGCTTCCCTTTTCCGGTACTATTTTCACTTATCATATTGAACATGACCTTGGACCCGTTTGGAAACTGTTCTCAGTTTAGTTTTCTGTTTTCATTTTTAAAGTTGCTTCTATTATCTAATATTGGATGACTGGAAAGGCCATGTTATTTTGTATATTGAAATTAATATTTACAAATTCATATTTCAAGGAGTATTGGAGTAAGGACAATATATGTCGAGTCAATTACTATTTCTGCTTTTCAATACACTTTATCACAAGGGCTAAATAAATATGAACTGGTAAACTTTCCCCTCCTATATTGAAGCATTAGCATGACGAGTTTCTTTGTGCAATTGGTACAGATTTTTTTCTTACTAGATTCGTATGTGAATATTAGCACAATTTGTCCTTAAATGTGCAATATGTGCCTAGTTAATAATTTTGGAATGCTATGTTCCTTTGTACCTTTCTAAATGAAACACAGGAAATTTCAAGATCAACTGTCCAGAAAAAATGCTATAGAGTCTGTTGGAAATGCTACAGGTGAGTCCCGTTCCAGCCTTATGATCATTTTAACTTCTTCGCATTTTTTACATTCAGTTACATATGGTGTCGATCGTTAAACAGGATACCTGAACTGACGTCGCGAACAACTTCTTGTTTCCATGTTCTTTCTTTGCTTCAAATTACTCTCTACCTCGCATGTATTTCAAACACTAGGCTTCTGTTTATGCAAAATTGAATGGCTTGGTCTCCTTGCAGAAGGATCCCATGAACTGGAGGGAGATAATACCACAACTTCTTCCCAATCTATTGAGGAAAGGCTTATCAAAGTAATGACTCAATTAGCCAACGAAGAAGAAGAATTCCTATCAGCAGAACAAATTCAAAGTCAGGTGAAAAACAATTCTTCCAAATATTAGGGAGAAACCTACCTATACTTGCTGCAGTTGAAATGTTAGTCAAATTTGAGAAACTCTTTTTCTTGCCTGTGTATTAAGCTTTAAATCTTGCTGTTAACAAATCGCCATCAATCAAAATCAAGAAAAGAAAAATGGAAGCTCTAAATCAAGTTCTAGTAGGATCCATATCGTCATCTCAATAGGGGAAATGGTATTTTCAACAGTTTTCCATAGATCCTGCATTAATTCAAATTCATCTTGTCCCTCTCTCTCTTTCAGTGGAACTGTATTCTTAAATGATAATATTATGTCTGCAGAATCGGCAAACGTTGATAAATCTGGAGAAAAGGAAGGCTGTGATGGTGATGATGGTGAAAGGAACAAAAGAATTGGAAGATTTGACTAAATATCCTTTTCAAATAAATTATCACTTTTGACATAACAGATTATGTTAATGTATGAAAAATGCCCTATTAACATTCTAAGTGCTAAGATTTCTTCACTAATATTAATTTTTTAAATACTTCCTGTATACTACTGCTTTGCCTGGTGTCCAAAAAAATAGAAGCAGAAAGGTAAACAATAGTAAGTTTACAAAAGATTTGCTGTTATTGTACTTTATCATTTATATCATTAAGTTTCCTTTTCTGATTCAACAGAAGCAATGCTTTGTAGTCAAAGTCAATTGCTGAGAAATATAGAATGTATTTAAATCTTACTATATCTATTAATAATCTTTTACCAACTTTGGACACTTCCGGGTGATTATGTTTCTTTGACCATCAATAAGCAGACTTCTGGACTGGAAATGTCATATGGTCGTCTCAGCGAGGAATTGCTGAAAAGTTGTATCTGCCCTCAATGTTTCCAAGACAATACGGAGGCTTTGGACAACATTCCTCAGGTAAATGAGGCCCATTGAAATTTTACAAGAAACATAAAATGTTCTGCACCGTAGAATTTTAGATATGCAAAATCAGCAGGTAAATTTCAGAGCAAATATAGTAGGATACTCACCATTCTAATTTCTAAGTATGTCAAAACATTTTGCGTAACTTTCTTTTGTTGTCTATTTTGTCTACATATATTCACAAATTCAATTAAACCCAGATAGACGGTGTAGAATTTTTCTTTTAAAAAAATTGAAGTGAACTTGAAGGAGACCAAGATAATTCAAGTCACTTCTTCATCTCCCTACATACCCAGCTTGGTCGTAAAAGCTGAGCTCCCAGTACTTTCTTTCCCTTGTAATTGTTCTATATGTTTGTTCTATAAGAATTTCGCACCCATGGTGACGATTCTTCCCTATCCTTTACCATCAATGCTGCCAAGGTAGATTTTGCTTCTTCATTAGTTTCGCCCTTCACCTGCATCATATCAAGGTTATGTTTTCAAGATCAAAAGTACAAACCTCCTGAATTTCTTATCTGAAAACCAAATTTGATTCTATACAGATCAGTTTGATAATGATTATATATATCTGTTGTTAGACCAGTTCCCTAGGGTACAGTAAGGAACTAAAATGTTTGCTCATGAGAGTTTACCATCTGTTTGGGAGGCGGTATGGAGGGAAGAAATTTGCTGAGGGCAATAACCCTTGGGTTTGTAGATTCCAGCAGCTCAATCTGTGCTAAAAATTGGGCAGAGACTGGCCTGTGATCAGAAAACTTACTCTCACTTCTGAAATAGGAGAGTTGCCTCACTCCTTTTCCATACCATAGAATTCTGTCACACCTGCCAAGTTACATAAATCATTTAGTCAATTACTTGCATTCTTTAACCTCACTCTCTCTGTCTGACTTTTTTTCCCCATTTTTTTTTTTTAGGGGAATTAATCCAAAAGTCTAGGCCTTCATTTAAGGTTTCAGAGGGAACAAAGAGTAAATTATTTGGCATTCTTTAAGCTCTCTATCTTTTTCTCTGTTTTTTCTTCTGTCTCTGGGAAATTATTTCATCTCTCTCTCTCTCCCTCTCTCCCTCTCTGTGAATTCTGTTTTTCCTTCTCTCTTGGAAATTAATTCAAAACAGAAGGATCCACACTCTACCCTATGATTTCATCTCATCGAGTTCATAGAGAGAGATTACACTTTCTGTTTCTGTCTGTTTGTTTTCCAATTTCTTGGAAATTAATTGAAAACTGAAGGACTTCATGGACTCTGTACTCAAGAATCCTATATGCTTTTAGAGTATAGTACCATGCTTTTAGAGCTATCAAGGACTTCATAAACCCTAAACCCTAGGGCTTCATAAGCTTTTAGAGAGGGAGAGAGAATAGAGTAAAATGTGTGTTAGATGATGAAATAGTACCATGCTGGAGTTCTTTGCTTCTCTCCTGTTCTTCTCAGAGGACCACCTGAATAGCGATTGCAATTTGATGAAGAATACTTGTAGGTAGGAGCAAACTCTATGTTCCCTTCTCTCCATCCCTGAAATACCCCACCAGCTTCTTGCTCTTTCCGTAGCTGATCAAACTCTTGCAATGCTTCCCACTCTTGTTCCTTTATCAATTGCCTCGCAAAACTGTCCTCTAAATACAGCCTATAGTTCAGATCCCCAAACCAAAATATTTGACTGTTCCACAGCACACAAATCCAAAATTTACGTCAATTTTAACTTTCCATCATAACACTACTAACTATTGTTTCAATCTTTTGAAAAGTTTATGCTTTCTAGAAAGCCCTTTTCTTAAAACTAACTCCAAGCCACCAAGGACAAATGGGTAATTTACTCTAAGTTTAATTATCTATTCTAGAACTTTAACCTCTCTATTTTAACATTGCCTTAAATCGGAAGAAAAATTATGTTGGACGTACAACGACTGTGTACAATCACTGTAACGTTGGCCTTTTTCATTTAATAGCGACGACAAAGAAATTAAAAACACCCACTTACTCATGTCCTAAGATGGTGAGAGGTGGAGGACGTGGATTTGGATAGGAATCATCTTTAGGCGTTCTGGCGAAAAAAGTTCGCCGGAATATCTCAGACACCTGGCGGTTCCTCCGCCGCTCGTCCCCCTTTTTCTCCCCGGAAGCCAAATGGGCAGCCACAAAGCAAAAACTTGTCCCTTCAATCGACATACTCACCGAAACCGACCCTTTATTCCCCAAGTAACCCATTATTCCACAGGCCACCGAACAAACTTTCACATTGGATATGTAATATTTCCTCACCAAATCTCTCTTTATCCATACGCTTATAAACACTCCCACCATCTTCTTGCTTGCCAACAACACGTATCTGCTCCCGCCCATTACCCTGTTCGCCGGAATTCTCCCCGGGAATTTGATCGGAGTTTGATCGCCGCCTGCGAAACTCCTCGGCCTTTTAGAGTCTTTGTTTCTTTTGTAATCCTCGTCGCCGGTGGCTGTGTTCGTCATCATTGGCGTTAGCCATGGGCATCCGTATTTGTC

mRNA sequence

CATACACTTGGAGGAAAATGATTAGAGAGCAACTCAAGGGCTCAAACGTTATGGCGCTAAACGAAAATCAAAAGCTATTTCTCTCCCTAATTAACGAATACGCGGCCGAAAAATCGCAAGGAGAGCAAAGCGTTGTTGTTTTGAAGAAGAGAACGGAAGAACTGCGATCTGAGCTGGAAGTGGCTAATGTGGAGCTCGAAAATGTCAAGCGCGTCAAAGAAACCACTGAACAAGAGCTTAAAGGCTGTGAAGTCGAATTGTCTCTGAATGAGACTGCAATTCAGACTCTCGAAGCAAGAATCTCCGTGCTGCAAGGTGAAATTGCATCTGTTGGATCTGAGTTAGACTCTCTGAAGATTTTTTTCTTACTAGATTCGAAATTTCAAGATCAACTGTCCAGAAAAAATGCTATAGAGTCTGTTGGAAATGCTACAGAAGGATCCCATGAACTGGAGGGAGATAATACCACAACTTCTTCCCAATCTATTGAGGAAAGGCTTATCAAAGTAATGACTCAATTAGCCAACGAAGAAGAAGAATTCCTATCAGCAGAACAAATTCAAAGTCAGAATCGGCAAACGTTGATAAATCTGGAGAAAAGGAAGGCTGTGATGACTTCTGGACTGGAAATGTCATATGGTCGTCTCAGCGAGGAATTGCTGAAAAGTTGTATCTGCCCTCAATGTTTCCAAGACAATACGGAGGCTTTGGACAACATTCCTCAGGTAAATGAGGCCCATTGAAATTTTACAAGAAACATAAAATGTTCTGCACCGTAGAATTTTAGATATGCAAAATCAGCAGGTAAATTTCAGAGCAAATATAGTAGGATACTCACCATTCTAATTTCTAAGTATGTCAAAACATTTTGCGTAACTTTCTTTTGTTGTCTATTTTGTCTACATATATTCACAAATTCAATTAAACCCAGATAGACGGTGTAGAATTTTTCTTTTAAAAAAATTGAAGTGAACTTGAAGGAGACCAAGATAATTCAAGTCACTTCTTCATCTCCCTACATACCCAGCTTGGTCGTAAAAGCTGAGCTCCCAGTACTTTCTTTCCCTTGTAATTGTTCTATATGTTTGTTCTATAAGAATTTCGCACCCATGGTGACGATTCTTCCCTATCCTTTACCATCAATGCTGCCAAGGTAGATTTTGCTTCTTCATTAGTTTCGCCCTTCACCTGCATCATATCAAGGTTATGTTTTCAAGATCAAAAGTACAAACCTCCTGAATTTCTTATCTGAAAACCAAATTTGATTCTATACAGATCAGTTTGATAATGATTATATATATCTGTTGTTAGACCAGTTCCCTAGGGTACAGTAAGGAACTAAAATGTTTGCTCATGAGAGTTTACCATCTGTTTGGGAGGCGGTATGGAGGGAAGAAATTTGCTGAGGGCAATAACCCTTGGGTTTGTAGATTCCAGCAGCTCAATCTGTGCTAAAAATTGGGCAGAGACTGGCCTGTGATCAGAAAACTTACTCTCACTTCTGAAATAGGAGAGTTGCCTCACTCCTTTTCCATACCATAGAATTCTGTCACACCTGCCAAGTTACATAAATCATTTAGTCAATTACTTGCATTCTTTAACCTCACTCTCTCTGTCTGACTTTTTTTCCCCATTTTTTTTTTTTAGGGGAATTAATCCAAAAGTCTAGGCCTTCATTTAAGGTTTCAGAGGGAACAAAGAGTAAATTATTTGGCATTCTTTAAGCTCTCTATCTTTTTCTCTGTTTTTTCTTCTGTCTCTGGGAAATTATTTCATCTCTCTCTCTCTCCCTCTCTCCCTCTCTGTGAATTCTGTTTTTCCTTCTCTCTTGGAAATTAATTCAAAACAGAAGGATCCACACTCTACCCTATGATTTCATCTCATCGAGTTCATAGAGAGAGATTACACTTTCTGTTTCTGTCTGTTTGTTTTCCAATTTCTTGGAAATTAATTGAAAACTGAAGGACTTCATGGACTCTGTACTCAAGAATCCTATATGCTTTTAGAGTATAGTACCATGCTTTTAGAGCTATCAAGGACTTCATAAACCCTAAACCCTAGGGCTTCATAAGCTTTTAGAGAGGGAGAGAGAATAGAGTAAAATGTGTGTTAGATGATGAAATAGTACCATGCTGGAGTTCTTTGCTTCTCTCCTGTTCTTCTCAGAGGACCACCTGAATAGCGATTGCAATTTGATGAAGAATACTTGTAGGTAGGAGCAAACTCTATGTTCCCTTCTCTCCATCCCTGAAATACCCCACCAGCTTCTTGCTCTTTCCGTAGCTGATCAAACTCTTGCAATGCTTCCCACTCTTGTTCCTTTATCAATTGCCTCGCAAAACTGTCCTCTAAATACAGCCTATAGTTCAGATCCCCAAACCAAAATATTTGACTGTTCCACAGCACACAAATCCAAAATTTACGTCAATTTTAACTTTCCATCATAACACTACTAACTATTGTTTCAATCTTTTGAAAAGTTTATGCTTTCTAGAAAGCCCTTTTCTTAAAACTAACTCCAAGCCACCAAGGACAAATGGGTAATTTACTCTAAGTTTAATTATCTATTCTAGAACTTTAACCTCTCTATTTTAACATTGCCTTAAATCGGAAGAAAAATTATGTTGGACGTACAACGACTGTGTACAATCACTGTAACGTTGGCCTTTTTCATTTAATAGCGACGACAAAGAAATTAAAAACACCCACTTACTCATGTCCTAAGATGGTGAGAGGTGGAGGACGTGGATTTGGATAGGAATCATCTTTAGGCGTTCTGGCGAAAAAAGTTCGCCGGAATATCTCAGACACCTGGCGGTTCCTCCGCCGCTCGTCCCCCTTTTTCTCCCCGGAAGCCAAATGGGCAGCCACAAAGCAAAAACTTGTCCCTTCAATCGACATACTCACCGAAACCGACCCTTTATTCCCCAAGTAACCCATTATTCCACAGGCCACCGAACAAACTTTCACATTGGATATGTAATATTTCCTCACCAAATCTCTCTTTATCCATACGCTTATAAACACTCCCACCATCTTCTTGCTTGCCAACAACACGTATCTGCTCCCGCCCATTACCCTGTTCGCCGGAATTCTCCCCGGGAATTTGATCGGAGTTTGATCGCCGCCTGCGAAACTCCTCGGCCTTTTAGAGTCTTTGTTTCTTTTGTAATCCTCGTCGCCGGTGGCTGTGTTCGTCATCATTGGCGTTAGCCATGGGCATCCGTATTTGTC

Coding sequence (CDS)

ATGATTAGAGAGCAACTCAAGGGCTCAAACGTTATGGCGCTAAACGAAAATCAAAAGCTATTTCTCTCCCTAATTAACGAATACGCGGCCGAAAAATCGCAAGGAGAGCAAAGCGTTGTTGTTTTGAAGAAGAGAACGGAAGAACTGCGATCTGAGCTGGAAGTGGCTAATGTGGAGCTCGAAAATGTCAAGCGCGTCAAAGAAACCACTGAACAAGAGCTTAAAGGCTGTGAAGTCGAATTGTCTCTGAATGAGACTGCAATTCAGACTCTCGAAGCAAGAATCTCCGTGCTGCAAGGTGAAATTGCATCTGTTGGATCTGAGTTAGACTCTCTGAAGATTTTTTTCTTACTAGATTCGAAATTTCAAGATCAACTGTCCAGAAAAAATGCTATAGAGTCTGTTGGAAATGCTACAGAAGGATCCCATGAACTGGAGGGAGATAATACCACAACTTCTTCCCAATCTATTGAGGAAAGGCTTATCAAAGTAATGACTCAATTAGCCAACGAAGAAGAAGAATTCCTATCAGCAGAACAAATTCAAAGTCAGAATCGGCAAACGTTGATAAATCTGGAGAAAAGGAAGGCTGTGATGACTTCTGGACTGGAAATGTCATATGGTCGTCTCAGCGAGGAATTGCTGAAAAGTTGTATCTGCCCTCAATGTTTCCAAGACAATACGGAGGCTTTGGACAACATTCCTCAGGTAAATGAGGCCCATTGA

Protein sequence

MIREQLKGSNVMALNENQKLFLSLINEYAAEKSQGEQSVVVLKKRTEELRSELEVANVELENVKRVKETTEQELKGCEVELSLNETAIQTLEARISVLQGEIASVGSELDSLKIFFLLDSKFQDQLSRKNAIESVGNATEGSHELEGDNTTTSSQSIEERLIKVMTQLANEEEEFLSAEQIQSQNRQTLINLEKRKAVMTSGLEMSYGRLSEELLKSCICPQCFQDNTEALDNIPQVNEAH

Homology

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BLAST of Cp4.1LG03g07730 vs. TrEMBL
Match: A0A0A0LG33_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_3G829020 PE=4 SV=1)

HSP 1 Score: 183.3 bits (464), Expect = 3.4e-43
Identity = 110/196 (56.12%), Postives = 145/196 (73.98%), Query Frame = 1


Query: 10  NVMALNENQKLFLSLINEYAAEKSQGEQSVVVLKKRTEELRSELEVANVELENVKRVKET 69
           N +++ E+   F+SLINEY AEK + EQ +V+L +R E+LRS+LE  NVE+EN KR +ET
Sbjct: 4   NSLSVPESYNQFISLINEYVAEKMRDEQRIVILTRRIEDLRSQLEATNVEIENAKRARET 63

Query: 70  TEQELKGCEVELSLNETAIQTLEARISVLQGEIASVGSELDSLKI---FFLLDS---KFQ 129
            EQELKG EVELSLN+T++QTLE RISVLQ EIA+ GSEL+SLKI    F L+    KFQ
Sbjct: 64  AEQELKGSEVELSLNKTSVQTLEIRISVLQSEIATTGSELESLKIINHLFALNKKIRKFQ 123

Query: 130 DQLSRKNAIESVGNATEGSHELEGDNTTTSSQSIEERLIKVMTQLANEEEEFLSAEQIQS 189
           ++L  KN +E + NATE  HE E DN   SSQS+EERLI+V+TQ+   E++ ++ EQI  
Sbjct: 124 EELYMKN-VEFLKNATEKPHEPEEDNNKISSQSVEERLIRVITQITYGEDDCMTEEQILR 183

Query: 190 QNRQTLINLEKRKAVM 200
           +NR+T I LE+R+A M
Sbjct: 184 ENRETKIYLEQRRAAM 198

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BLAST of Cp4.1LG03g07730 vs. TrEMBL
Match: A0A0D2Q4G2_GOSRA (Uncharacterized protein OS=Gossypium raimondii GN=B456_001G258300 PE=4 SV=1)

HSP 1 Score: 146.7 bits (369), Expect = 3.5e-32
Identity = 96/204 (47.06%), Postives = 141/204 (69.12%), Query Frame = 1


Query: 12  MALNENQKLFLSLINEYAAEKSQGEQSVVVLKKRTEELRSELEVANVELENVKRVKETTE 71
           MA  +  K  LSLI ++A+EKSQGE+ VV LKK+ EELRSELE AN ELE  KR+KETTE
Sbjct: 1   MAGIDPPKNLLSLIRDFASEKSQGERRVVGLKKQIEELRSELEAANSELEEAKRLKETTE 60

Query: 72  QELKGCEVELSLNETAIQTLEARISVLQGEIASVGSELDSLK----------IFFLLD-- 131
           QELKG EVEL+LNE +IQ LEARI+++Q E+++VGSE++ LK          I  +L+  
Sbjct: 61  QELKGFEVELALNEASIQALEARIALIQDEVSNVGSEIEELKNKEATSRDEFICQMLEFN 120

Query: 132 ---SKFQDQLSRKNAIES-VGNATEGSHELEGDNTTTSSQSIEERLIKVMTQLANEEEEF 191
               KFQ+ ++  +  ++ +GNATE  H+   + T  +S +I+++   V++Q+ANEEEE+
Sbjct: 121 TKIRKFQETIASGSENKNIIGNATEEDHKFVKEATEITSINIKDQFTHVVSQIANEEEEY 180

Query: 192 LSAEQIQSQNRQTLINLEKRKAVM 200
           L+ + IQ Q +  LI++E++  +M
Sbjct: 181 LAEQNIQKQLQLELIDIERKVYLM 204

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BLAST of Cp4.1LG03g07730 vs. TrEMBL
Match: A0A087GV32_ARAAL (Uncharacterized protein OS=Arabis alpina GN=AALP_AA5G052700 PE=4 SV=1)

HSP 1 Score: 140.6 bits (353), Expect = 2.5e-30
Identity = 99/253 (39.13%), Postives = 149/253 (58.89%), Query Frame = 1


Query: 12  MALNENQKLFLSLINEYAAEKSQGEQSVVVLKKRTEELRSELEVANVELENVKRVKETTE 71
           MA  + QK  LSLI ++ +E+S+GEQ VV LKKR E L+SE+E AN ELE+ KR+KE  E
Sbjct: 1   MAGIDTQKQLLSLIRDFTSERSRGEQRVVGLKKRIENLQSEVESANAELEDAKRIKEVAE 60

Query: 72  QELKGCEVELSLNETAIQTLEARISVLQGEIASVGSELDSLK----------IFFLLDSK 131
           +EL G EVELSLN+  IQ+LEARI +L  EI++VG+E+D+LK          I  +++  
Sbjct: 61  EELNGYEVELSLNDATIQSLEARIGLLHDEISTVGNEVDTLKNKEGLLRDQFISKMVELN 120

Query: 132 FQDQLSRKNAIESVGNATE----GSHELEGDNTTTSSQSIEERLIKVMTQLANEEEEFLS 191
            + +  ++    S+GN+       + ++  D     S+ I++ L +V +Q+A EEE +L+
Sbjct: 121 KEIREFQRTVASSLGNSNSTGITANVKVFEDGYGDDSEGIKDMLSEVNSQIAIEEEGYLA 180

Query: 192 AEQIQSQNRQTLINLEKRKAVM-----------TSGLEMSYGRLSEELLKSCICPQCFQD 240
            + IQ+Q ++ L   EK+ ++M           TS LE +   L EEL K C C  C  +
Sbjct: 181 EQNIQTQLQKELDEFEKKMSLMEAITDKTNSVQTSELEQTLASLGEELQKRCRCQHCQAE 240

[Close]

BLAST of Cp4.1LG03g07730 vs. TrEMBL
Match: A0A087GV31_ARAAL (Uncharacterized protein OS=Arabis alpina GN=AALP_AA5G052700 PE=4 SV=1)

HSP 1 Score: 140.6 bits (353), Expect = 2.5e-30
Identity = 100/254 (39.37%), Postives = 149/254 (58.66%), Query Frame = 1


Query: 12  MALNENQKLFLSLINEYAAEKSQGEQSVVVLKKRTEELRSELEVANVELENVKRVKETTE 71
           MA  + QK  LSLI ++ +E+S+GEQ VV LKKR E L+SE+E AN ELE+ KR+KE  E
Sbjct: 1   MAGIDTQKQLLSLIRDFTSERSRGEQRVVGLKKRIENLQSEVESANAELEDAKRIKEVAE 60

Query: 72  QELKGCEVELSLNETAIQTLEARISVLQGEIASVGSELDSLK----------IFFLLDSK 131
           +EL G EVELSLN+  IQ+LEARI +L  EI++VG+E+D+LK          I  +++  
Sbjct: 61  EELNGYEVELSLNDATIQSLEARIGLLHDEISTVGNEVDTLKNKEGLLRDQFISKMVELN 120

Query: 132 FQDQLSRKNAIESVGNA-----TEGSHELEGDNTTTSSQSIEERLIKVMTQLANEEEEFL 191
            + +  ++    S+GN+     T    ++  D     S+ I++ L +V +Q+A EEE +L
Sbjct: 121 KEIREFQRTVASSLGNSNSTGITATDVKVFEDGYGDDSEGIKDMLSEVNSQIAIEEEGYL 180

Query: 192 SAEQIQSQNRQTLINLEKRKAVM-----------TSGLEMSYGRLSEELLKSCICPQCFQ 240
           + + IQ+Q ++ L   EK+ ++M           TS LE +   L EEL K C C  C  
Sbjct: 181 AEQNIQTQLQKELDEFEKKMSLMEAITDKTNSVQTSELEQTLASLGEELQKRCRCQHCQA 240

[Close]

BLAST of Cp4.1LG03g07730 vs. TrEMBL
Match: A0A0D3DC22_BRAOL (Uncharacterized protein OS=Brassica oleracea var. oleracea PE=4 SV=1)

HSP 1 Score: 139.4 bits (350), Expect = 5.6e-30
Identity = 98/251 (39.04%), Postives = 148/251 (58.96%), Query Frame = 1


Query: 12  MALNENQKLFLSLINEYAAEKSQGEQSVVVLKKRTEELRSELEVANVELENVKRVKETTE 71
           MA  + QK  LSLI ++ +E+S+GEQ VV LKKR E L+SE+E AN E+E+ KR+KE  E
Sbjct: 1   MAGIDTQKQLLSLIRDFTSERSRGEQRVVGLKKRIESLQSEVEAANEEVEHAKRIKEVAE 60

Query: 72  QELKGCEVELSLNETAIQTLEARISVLQGEIASVGSELDSLK----------IFFLLDSK 131
           +EL G EVE SLN+  IQ+LEARI++LQ E+++VG+E+D+LK          I  +++  
Sbjct: 61  EELNGYEVESSLNDATIQSLEARIALLQDEVSTVGNEVDALKNKEGLLRDQFISQMVELN 120

Query: 132 FQDQLSRKNAIESVGNATEGSHELEGDNTTTSSQSIEERLIKVMTQLANEEEEFLSAEQI 191
            + ++ ++    SVGN  + + E+  D     SQ+I++ L  V +QLA EEE +L+ + I
Sbjct: 121 KEIRVFQRKVASSVGN--DDNVEVFEDGHGADSQAIKDMLSDVNSQLAKEEEGYLAEQNI 180

Query: 192 QSQNRQTLINLEKRKAVM----------------TSGLEMSYGRLSEELLKSCICPQCFQ 237
           + Q ++ L   EK+ ++M                +S LE +   L EEL K C C  C  
Sbjct: 181 KEQLQKELDEYEKKMSLMEAITDKTNSVHALAEQSSELEHTLASLGEELQKRCRCQHCQA 240

[Close]

BLAST of Cp4.1LG03g07730 vs. TAIR10
Match: AT3G28370.1 (AT3G28370.1 unknown protein)

HSP 1 Score: 120.9 bits (302), Expect = 1.1e-27
Identity = 85/202 (42.08%), Postives = 129/202 (63.86%), Query Frame = 1


Query: 12  MALNENQKLFLSLINEYAAEKSQGEQSVVVLKKRTEELRSELEVANVELENVKRVKETTE 71
           MA  + QK  LSLI ++ +E+S+GEQ VV LKKR E L+SE+E AN E+E  KR+KE  E
Sbjct: 1   MAGIDTQKQLLSLIRDFTSERSRGEQRVVGLKKRIEILQSEVEAANSEVEKAKRIKEVAE 60

Query: 72  QELKGCEVELSLNETAIQTLEARISVLQGEIASVGSELDSLK-IFFLLDSKFQDQLSRKN 131
           +EL G EVELSLN+  IQ+LEARIS+LQ E+ ++GSE+D+LK    LL  +F  Q+   N
Sbjct: 61  EELNGYEVELSLNDATIQSLEARISLLQDEVTTIGSEVDALKNKEGLLRDQFISQMEELN 120

Query: 132 --------AIESVGNATEG-----SHELEGDNTTTSSQSIEERLIKVMTQLANEEEEFLS 191
                    ++S  ++ +G     + +   D +    ++I+  L +V +QLA EEE +L+
Sbjct: 121 KEIREFQKTVDSSLSSDDGIGITANVKASEDGSGADLEAIKGMLSEVNSQLAKEEEGYLA 180

Query: 192 AEQIQSQNRQTLINLEKRKAVM 200
            ++IQ Q ++ L + EK+ ++M
Sbjct: 181 EQKIQEQLQKELDDYEKKMSLM 202

[Close]

BLAST of Cp4.1LG03g07730 vs. NCBI nr
Match: gi|659085494|ref|XP_008443448.1| (PREDICTED: coiled-coil domain-containing protein 18 isoform X1 [Cucumis melo])

HSP 1 Score: 237.7 bits (605), Expect = 2.2e-59
Identity = 138/262 (52.67%), Postives = 183/262 (69.85%), Query Frame = 1


Query: 9   SNVMALNENQKLFLSLINEYAAEKSQGEQSVVVLKKRTEELRSELEVANVELENVKRVKE 68
           +N +++ EN  LF+SLINEY AEK + EQ +V+LK+R E+LRS+LE  NVE+EN KR +E
Sbjct: 9   NNSLSVPENYNLFISLINEYVAEKMRDEQRIVILKRRIEDLRSQLEATNVEIENAKRARE 68

Query: 69  TTEQELKGCEVELSLNETAIQTLEARISVLQGEIASVGSELDSLKI------------FF 128
           TT+QELKGCEVELS+N+ ++QTLE RISVLQ EIA+  SEL+SLK              F
Sbjct: 69  TTQQELKGCEVELSMNKASVQTLEIRISVLQSEIATTASELESLKCEENFSSDQIINHLF 128

Query: 129 LLDS---KFQDQLSRKNAIESVGNATEGSHELEGDNTTTSSQSIEERLIKVMTQLANEEE 188
            L+    KFQ++L  KN +  + NATE SH+ E DN   SS S+EERLI+V+T++ + EE
Sbjct: 129 ALNKKIRKFQEELYMKN-VGFLKNATEESHQPEEDNNKNSSLSVEERLIRVITEITHGEE 188

Query: 189 EFLSAEQIQSQNRQTLINLEKRKAVM----------------TSGLEMSYGRLSEELLKS 240
           + ++ EQI  ++R+T I LE+R+A M                 SG E++Y  +SEELLKS
Sbjct: 189 DCMTEEQILREDRETKIYLEQRRAAMLMMVKGQTELEAAVKLNSGFELTYDHISEELLKS 248

[Close]

BLAST of Cp4.1LG03g07730 vs. NCBI nr
Match: gi|659085496|ref|XP_008443449.1| (PREDICTED: coiled-coil domain-containing protein 18 isoform X2 [Cucumis melo])

HSP 1 Score: 231.9 bits (590), Expect = 1.2e-57
Identity = 135/259 (52.12%), Postives = 180/259 (69.50%), Query Frame = 1


Query: 9   SNVMALNENQKLFLSLINEYAAEKSQGEQSVVVLKKRTEELRSELEVANVELENVKRVKE 68
           +N +++ EN  LF+SLINEY AEK + EQ +V+LK+R E+LRS+LE  NVE+EN KR +E
Sbjct: 9   NNSLSVPENYNLFISLINEYVAEKMRDEQRIVILKRRIEDLRSQLEATNVEIENAKRARE 68

Query: 69  TTEQELKGCEVELSLNETAIQTLEARISVLQGEIASVGSELDSLKI------------FF 128
           TT+QELKGCEVELS+N+ ++QTLE RISVLQ EIA+  SEL+SLK              F
Sbjct: 69  TTQQELKGCEVELSMNKASVQTLEIRISVLQSEIATTASELESLKCEENFSSDQIINHLF 128

Query: 129 LLDS---KFQDQLSRKNAIESVGNATEGSHELEGDNTTTSSQSIEERLIKVMTQLANEEE 188
            L+    KFQ++L  KN +  + NATE SH+ E DN   SS S+EERLI+V+T++ + EE
Sbjct: 129 ALNKKIRKFQEELYMKN-VGFLKNATEESHQPEEDNNKNSSLSVEERLIRVITEITHGEE 188

Query: 189 EFLSAEQIQSQNRQTLINLEKRKAVM----------------TSGLEMSYGRLSEELLKS 237
           + ++ EQI  ++R+T I LE+R+A M                 SG E++Y  +SEELLKS
Sbjct: 189 DCMTEEQILREDRETKIYLEQRRAAMLMMVKGQTELEAAVKLNSGFELTYDHISEELLKS 248

[Close]

BLAST of Cp4.1LG03g07730 vs. NCBI nr
Match: gi|700204479|gb|KGN59612.1| (hypothetical protein Csa_3G829020 [Cucumis sativus])

HSP 1 Score: 183.3 bits (464), Expect = 4.9e-43
Identity = 110/196 (56.12%), Postives = 145/196 (73.98%), Query Frame = 1


Query: 10  NVMALNENQKLFLSLINEYAAEKSQGEQSVVVLKKRTEELRSELEVANVELENVKRVKET 69
           N +++ E+   F+SLINEY AEK + EQ +V+L +R E+LRS+LE  NVE+EN KR +ET
Sbjct: 4   NSLSVPESYNQFISLINEYVAEKMRDEQRIVILTRRIEDLRSQLEATNVEIENAKRARET 63

Query: 70  TEQELKGCEVELSLNETAIQTLEARISVLQGEIASVGSELDSLKI---FFLLDS---KFQ 129
            EQELKG EVELSLN+T++QTLE RISVLQ EIA+ GSEL+SLKI    F L+    KFQ
Sbjct: 64  AEQELKGSEVELSLNKTSVQTLEIRISVLQSEIATTGSELESLKIINHLFALNKKIRKFQ 123

Query: 130 DQLSRKNAIESVGNATEGSHELEGDNTTTSSQSIEERLIKVMTQLANEEEEFLSAEQIQS 189
           ++L  KN +E + NATE  HE E DN   SSQS+EERLI+V+TQ+   E++ ++ EQI  
Sbjct: 124 EELYMKN-VEFLKNATEKPHEPEEDNNKISSQSVEERLIRVITQITYGEDDCMTEEQILR 183

Query: 190 QNRQTLINLEKRKAVM 200
           +NR+T I LE+R+A M
Sbjct: 184 ENRETKIYLEQRRAAM 198

[Close]

BLAST of Cp4.1LG03g07730 vs. NCBI nr
Match: gi|823128626|ref|XP_012443694.1| (PREDICTED: cingulin isoform X2 [Gossypium raimondii])

HSP 1 Score: 171.8 bits (434), Expect = 1.5e-39
Identity = 115/262 (43.89%), Postives = 164/262 (62.60%), Query Frame = 1


Query: 12  MALNENQKLFLSLINEYAAEKSQGEQSVVVLKKRTEELRSELEVANVELENVKRVKETTE 71
           MA  +  K  LSLI ++A+EKSQGE+ VV LKK+ EELRSELE AN ELE  KR+KETTE
Sbjct: 1   MAGIDPPKNLLSLIRDFASEKSQGERRVVGLKKQIEELRSELEAANSELEEAKRLKETTE 60

Query: 72  QELKGCEVELSLNETAIQTLEARISVLQGEIASVGSELDSLK----------IFFLLD-- 131
           QELKG EVEL+LNE +IQ LEARI+++Q E+++VGSE++ LK          I  +L+  
Sbjct: 61  QELKGFEVELALNEASIQALEARIALIQDEVSNVGSEIEELKNKEATSRDEFICQMLEFN 120

Query: 132 ---SKFQDQLSRKNAIES-VGNATEGSHELEGDNTTTSSQSIEERLIKVMTQLANEEEEF 191
               KFQ+ ++  +  ++ +GNATE  H+   + T  +S +I+++   V++Q+ANEEEE+
Sbjct: 121 TKIRKFQETIASGSENKNIIGNATEEDHKFVKEATEITSINIKDQFTHVVSQIANEEEEY 180

Query: 192 LSAEQIQSQNRQTLINLEKRKAVM----------------TSGLEMSYGRLSEELLKSCI 242
           L+ + IQ Q +  LI++E++  +M                 S L  +    S+EL K CI
Sbjct: 181 LAEQNIQKQLQLELIDIERKVYLMDVITREAKALENLTRQASELNTTCASFSKELQKRCI 240

[Close]

BLAST of Cp4.1LG03g07730 vs. NCBI nr
Match: gi|823128622|ref|XP_012443678.1| (PREDICTED: cingulin isoform X1 [Gossypium raimondii])

HSP 1 Score: 165.6 bits (418), Expect = 1.1e-37
Identity = 115/267 (43.07%), Postives = 164/267 (61.42%), Query Frame = 1


Query: 12  MALNENQKLFLSLINEYAAEKSQGEQSVVVLKKRTEELRSELEVANVELENVKRVKETTE 71
           MA  +  K  LSLI ++A+EKSQGE+ VV LKK+ EELRSELE AN ELE  KR+KETTE
Sbjct: 1   MAGIDPPKNLLSLIRDFASEKSQGERRVVGLKKQIEELRSELEAANSELEEAKRLKETTE 60

Query: 72  QELKGCEVELSLNETAIQTLEARISVLQGEIASVGSELDSLK----------IFFLLD-- 131
           QELKG EVEL+LNE +IQ LEARI+++Q E+++VGSE++ LK          I  +L+  
Sbjct: 61  QELKGFEVELALNEASIQALEARIALIQDEVSNVGSEIEELKNKEATSRDEFICQMLEFN 120

Query: 132 ---SKFQDQLSRKNAIES-VGNAT-----EGSHELEGDNTTTSSQSIEERLIKVMTQLAN 191
               KFQ+ ++  +  ++ +GNAT     E  H+   + T  +S +I+++   V++Q+AN
Sbjct: 121 TKIRKFQETIASGSENKNIIGNATVSFSPEEDHKFVKEATEITSINIKDQFTHVVSQIAN 180

Query: 192 EEEEFLSAEQIQSQNRQTLINLEKRKAVM----------------TSGLEMSYGRLSEEL 242
           EEEE+L+ + IQ Q +  LI++E++  +M                 S L  +    S+EL
Sbjct: 181 EEEEYLAEQNIQKQLQLELIDIERKVYLMDVITREAKALENLTRQASELNTTCASFSKEL 240

The following BLAST results are available for this feature:

BLAST of Cp4.1LG03g07730 vs. Swiss-Prot


Match Name	E-value	Identity	Description

BLAST of Cp4.1LG03g07730 vs. TrEMBL


Match Name	E-value	Identity	Description
A0A0A0LG33_CUCSA	3.4e-43	56.12	Uncharacterized protein OS=Cucumis sativus GN=Csa_3G829020 PE=4 SV=1	[more]
A0A0D2Q4G2_GOSRA	3.5e-32	47.06	Uncharacterized protein OS=Gossypium raimondii GN=B456_001G258300 PE=4 SV=1	[more]
A0A087GV32_ARAAL	2.5e-30	39.13	Uncharacterized protein OS=Arabis alpina GN=AALP_AA5G052700 PE=4 SV=1	[more]
A0A087GV31_ARAAL	2.5e-30	39.37	Uncharacterized protein OS=Arabis alpina GN=AALP_AA5G052700 PE=4 SV=1	[more]
A0A0D3DC22_BRAOL	5.6e-30	39.04	Uncharacterized protein OS=Brassica oleracea var. oleracea PE=4 SV=1	[more]

BLAST of Cp4.1LG03g07730 vs. TAIR10


Match Name	E-value	Identity	Description
AT3G28370.1	1.1e-27	42.08	unknown protein	[more]

BLAST of Cp4.1LG03g07730 vs. NCBI nr


Match Name	E-value	Identity	Description
gi\|659085494\|ref\|XP_008443448.1\|	2.2e-59	52.67	PREDICTED: coiled-coil domain-containing protein 18 isoform X1 [Cucumis melo]	[more]
gi\|659085496\|ref\|XP_008443449.1\|	1.2e-57	52.12	PREDICTED: coiled-coil domain-containing protein 18 isoform X2 [Cucumis melo]	[more]
gi\|700204479\|gb\|KGN59612.1\|	4.9e-43	56.12	hypothetical protein Csa_3G829020 [Cucumis sativus]	[more]
gi\|823128626\|ref\|XP_012443694.1\|	1.5e-39	43.89	PREDICTED: cingulin isoform X2 [Gossypium raimondii]	[more]
gi\|823128622\|ref\|XP_012443678.1\|	1.1e-37	43.07	PREDICTED: cingulin isoform X1 [Gossypium raimondii]	[more]

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **INTERPRO**
Term	Definition

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0008150	biological_process
cellular_component	GO:0005575	cellular_component
molecular_function	GO:0003674	molecular_function

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Cp4.1LG03g07730.1	Cp4.1LG03g07730.1	mRNA

InterPro

Analysis Name: InterPro Annotations of Cucurbita pepo
Date Performed: 2017-12-02


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	unknown	Coil	Coil	coord: 154..174 score: -coord: 39..80 scor
None	No IPR available	PANTHER	PTHR36001	FAMILY NOT NAMED	coord: 8..199 score: 3.1

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
Cp4.1LG03g07730	Cucsa.339260	Cucumber (Gy14) v1	cgycpeB0888
Cp4.1LG03g07730	CmaCh11G010500	Cucurbita maxima (Rimu)	cmacpeB146
Cp4.1LG03g07730	CmaCh14G006190	Cucurbita maxima (Rimu)	cmacpeB283
Cp4.1LG03g07730	CmoCh11G010730	Cucurbita moschata (Rifu)	cmocpeB123
Cp4.1LG03g07730	CmoCh14G006280	Cucurbita moschata (Rifu)	cmocpeB245
Cp4.1LG03g07730	Cla017043	Watermelon (97103) v1	cpewmB597
Cp4.1LG03g07730	Csa3G829020	Cucumber (Chinese Long) v2	cpecuB597
Cp4.1LG03g07730	ClCG10G014670	Watermelon (Charleston Gray)	cpewcgB546
Cp4.1LG03g07730	CSPI03G39430	Wild cucumber (PI 183967)	cpecpiB599
Cp4.1LG03g07730	Lsi03G014410	Bottle gourd (USVL1VR-Ls)	cpelsiB503
Cp4.1LG03g07730	MELO3C030968.2	Melon (DHL92) v3.6.1	cpemedB679
Cp4.1LG03g07730	CsaV3_3G041890	Cucumber (Chinese Long) v3	cpecucB0747
Cp4.1LG03g07730	Bhi11G002546	Wax gourd	cpewgoB0743
Cp4.1LG03g07730	Carg22916	Silver-seed gourd	carcpeB0301
Cp4.1LG03g07730	Carg09757	Silver-seed gourd	carcpeB0613

The following gene(s) are paralogous to this gene:


Gene	Paralogue	Organism	Block
Cp4.1LG03g07730	Cp4.1LG04g01300	Cucurbita pepo (Zucchini)	cpecpeB475

The following block(s) are covering this gene:


Gene	Organism	Block
Cp4.1LG03g07730	Wild cucumber (PI 183967)	cpecpiB596
Cp4.1LG03g07730	Cucumber (Chinese Long) v2	cpecuB595
Cp4.1LG03g07730	Melon (DHL92) v3.5.1	cpemeB572
Cp4.1LG03g07730	Cucumber (Gy14) v2	cgybcpeB105
Cp4.1LG03g07730	Cucumber (Gy14) v2	cgybcpeB108
Cp4.1LG03g07730	Cucumber (Gy14) v2	cgybcpeB395
Cp4.1LG03g07730	Melon (DHL92) v3.6.1	cpemedB670
Cp4.1LG03g07730	Silver-seed gourd	carcpeB0378
Cp4.1LG03g07730	Silver-seed gourd	carcpeB0512
Cp4.1LG03g07730	Cucumber (Chinese Long) v3	cpecucB0738
Cp4.1LG03g07730	Cucumber (Chinese Long) v3	cpecucB0740
Cp4.1LG03g07730	Wax gourd	cpewgoB0824
Cp4.1LG03g07730	Cucurbita pepo (Zucchini)	cpecpeB218
Cp4.1LG03g07730	Cucumber (Gy14) v1	cgycpeB0204