Carg22916 (gene) Silver-seed gourd
The following sequences are available for this feature:
Legend: polypeptideCDSexon Hold the cursor over a type above to highlight its positions in the sequence below.ATGGAAGAACTTCGATCTGAGCTTGAAGCGGCCAATGCTGACCTTGAAAACGTCAAGCAAACCAAAGAAGCCACTGAACAGGAGCTTAAAGGCTGTGAAGTCGAATTGTCTCTGAATGAAACTTCAATTAAGACTCTCGAGGTTTTATTTTCTATTTCTCTTACATTTCACTCTACAGTTGTGTCACCATTAATTGATCTTTTTCCTTCTTAAATCTAATTTATCGACTCCAGACGAGGATTTCTGTGCTACAAGGTGAAATTGCATCTGTTGGGTCTGAGTTAGACTCTCTTAAGGTGCTAAGATGATACTTAGAGTTCTGTATTTGTTATATTGAATCTGCCTTACATTTCTATTCTCACATTCTCTTTATTCGCTTAAAAAACATACTGGGATCTGGAATACGGTCGTTCGATCATAAAAGTGTGAAGGAGGAGCCGCAAGGTTGAAAATCGTCTCTCTTTTGTGATTTACAGCATATTAGAATAGTATGAAATTCATCTATTTTACAGAAGTATATAATTCAATGGCTTAAGAACACAGTGAAAGTGATGAGATCTTATTGACCATGCAGGAACCAGTTTCTCGATCACATGTCAGAGCTTGATGAAAAAATCAGGTCCGTTTTTTGTATTTTAATGCAAGCAACTTGCACTATGCATGCCTGTACATATGCTTCCCTTTGGGCTTGATAGTTTTCAACTAGGACCTGTTTGGAAACTGCTCTCAAAATAGTTTTGTTGTTATTATTAAAGTTGTTAAATTCTGAAAGCTAAATGTAGCACATTCTACTTCTAAATTCGTTTCTTCTTCATTTTTTGTTTTTCTTTCCTTGCTTAATCTCTGTAGCTGTCGAGTCGGATACTCTTAACCTTAAAGGCACTATTATCATCATTATTGACCCAGTATTTGGGTAAAATAATGTTCAAGTGCCTGTCGTTATAATGCTTCTTTCTGTAATAAAGCTGTTACTCGTTACAAGTTATTATTTCTGTTTTTAAGAATACGTTTTATCTCAAAGGGCCAAATAAATGTCTATTCTTAAGATTTTGCCTCCCATATTGAAAGCTCTAGCATGACAAATTTCTTACAGGAATGGACATAGATTTTGTCTCTTGTAAATATTCGAACAATTTGTTCTTAAATATGTAAACGGTGCGCAATTAGTAATATTGTAAGGCTATATTCCATTAACTTTCTTAATGAAACACAGGAAATTTCAATATCAACTGGACATAAAGAAAACTGGTATAGTTCCTGATGGAGATGCTACAGGTGAGTCAATGGTTTCTGTTCCAGCGTTATGATAATCTTCCCTTTTTTGCATTTTGTTATAGTCAATTCCATCTTGTTTTAATTGCTGAAAATGACACCTGAGATGATGTCGTGATTGTGAGCAACTTCTCGATCCATATTCTTTGTTTGTTTCAAATTACATTCTACCTCGAATATAGTTCAAATACGAGGCTTCTGTCTATGCAAAATTGAATGCCTTGGACTCCTTGCAGAAGAATCCCAAGAACTGGCGGGAGATGATACGAAAACTTCTGAGTCTGTTGAGGACAGGCTTATCAAAGTAATAACTCAAATAACCAATGAAGACGATGCCTACCTATTAGAAGAACAAATGAAAAATCAGGTAAAAAAACAGTGCTTCCAAATATTAGGAAGAAACCTACCTACTTTTATTTCCCGTGTATATGCTTTAAATTTTGTTGTCAACAAATGGGCCATCAATCAAAATCAAGAAAAGAAAATGGAAGTTGTAAATCAATAGGAAAAATGACATTTTCAACAGGTTATACATCCTGCCTTAATTTAAATTCATCTTCTCTCTCTTTCTTTCAGTGAAACTATATTCTTAAATGATAATATGGAATGATTGAATTTGCAGAATCGGCAAATGTCGATTAATCTAGAGAAAAGGAAGGCTGCAATGGCGATGATGCAGAAAGGAACAACAAAATCGGGAGATTTGACTAGATATCCTTCACAAATAAACTACTACACTTTCGACTTAACTGATTATTTTAATTTCTGA ATGGAAGAACTTCGATCTGAGCTTGAAGCGGCCAATGCTGACCTTGAAAACGTCAAGCAAACCAAAGAAGCCACTGAACAGGAGCTTAAAGGCTGTGAAGTCGAATTGTCTCTGAATGAAACTTCAATTAAGACTCTCGAGACGAGGATTTCTGTGCTACAAGGTGAAATTGCATCTGTTGGGTCTGAGTTAGACTCTCTTAAGTGTGAAGGAGGAGCCGCAAGGAACCAGTTTCTCGATCACATGTCAGAGCTTGATGAAAAAATCAGGAAATTTCAATATCAACTGGACATAAAGAAAACTGGTATAGTTCCTGATGGAGATGCTACAGAAGAATCCCAAGAACTGGCGGGAGATGATACGAAAACTTCTGAGTCTGTTGAGGACAGGCTTATCAAAGTAATAACTCAAATAACCAATGAAGACGATGCCTACCTATTAGAAGAACAAATGAAAAATCAGAATCGGCAAATGTCGATTAATCTAGAGAAAAGGAAGGCTGCAATGGCGATGATGCAGAAAGGAACAACAAAATCGGGAGATTTGACTAGATATCCTTCACAAATAAACTACTACACTTTCGACTTAACTGATTATTTTAATTTCTGA ATGGAAGAACTTCGATCTGAGCTTGAAGCGGCCAATGCTGACCTTGAAAACGTCAAGCAAACCAAAGAAGCCACTGAACAGGAGCTTAAAGGCTGTGAAGTCGAATTGTCTCTGAATGAAACTTCAATTAAGACTCTCGAGACGAGGATTTCTGTGCTACAAGGTGAAATTGCATCTGTTGGGTCTGAGTTAGACTCTCTTAAGTGTGAAGGAGGAGCCGCAAGGAACCAGTTTCTCGATCACATGTCAGAGCTTGATGAAAAAATCAGGAAATTTCAATATCAACTGGACATAAAGAAAACTGGTATAGTTCCTGATGGAGATGCTACAGAAGAATCCCAAGAACTGGCGGGAGATGATACGAAAACTTCTGAGTCTGTTGAGGACAGGCTTATCAAAGTAATAACTCAAATAACCAATGAAGACGATGCCTACCTATTAGAAGAACAAATGAAAAATCAGAATCGGCAAATGTCGATTAATCTAGAGAAAAGGAAGGCTGCAATGGCGATGATGCAGAAAGGAACAACAAAATCGGGAGATTTGACTAGATATCCTTCACAAATAAACTACTACACTTTCGACTTAACTGATTATTTTAATTTCTGA MEELRSELEAANADLENVKQTKEATEQELKGCEVELSLNETSIKTLETRISVLQGEIASVGSELDSLKCEGGAARNQFLDHMSELDEKIRKFQYQLDIKKTGIVPDGDATEESQELAGDDTKTSESVEDRLIKVITQITNEDDAYLLEEQMKNQNRQMSINLEKRKAAMAMMQKGTTKSGDLTRYPSQINYYTFDLTDYFNF
BLAST of Carg22916 vs. NCBI nr
Match: XP_022931131.1 (uncharacterized protein LOC111437393 isoform X2 [Cucurbita moschata]) HSP 1 Score: 215.7 bits (548), Expect = 1.4e-52 Identity = 114/122 (93.44%), Postives = 117/122 (95.90%), Query Frame = 0
BLAST of Carg22916 vs. NCBI nr
Match: XP_022931113.1 (uncharacterized protein LOC111437393 isoform X1 [Cucurbita moschata] >XP_022931123.1 uncharacterized protein LOC111437393 isoform X1 [Cucurbita moschata]) HSP 1 Score: 215.7 bits (548), Expect = 1.4e-52 Identity = 114/122 (93.44%), Postives = 117/122 (95.90%), Query Frame = 0
BLAST of Carg22916 vs. NCBI nr
Match: XP_023531912.1 (uncharacterized protein LOC111794033 isoform X2 [Cucurbita pepo subsp. pepo]) HSP 1 Score: 213.0 bits (541), Expect = 9.4e-52 Identity = 113/122 (92.62%), Postives = 115/122 (94.26%), Query Frame = 0
BLAST of Carg22916 vs. NCBI nr
Match: XP_023531910.1 (uncharacterized protein LOC111794033 isoform X1 [Cucurbita pepo subsp. pepo]) HSP 1 Score: 213.0 bits (541), Expect = 9.4e-52 Identity = 113/122 (92.62%), Postives = 115/122 (94.26%), Query Frame = 0
BLAST of Carg22916 vs. NCBI nr
Match: XP_022971356.1 (uncharacterized protein LOC111470104 isoform X1 [Cucurbita maxima] >XP_022971363.1 uncharacterized protein LOC111470104 isoform X1 [Cucurbita maxima]) HSP 1 Score: 203.0 bits (515), Expect = 9.7e-49 Identity = 108/114 (94.74%), Postives = 108/114 (94.74%), Query Frame = 0
BLAST of Carg22916 vs. TrEMBL
Match: tr|A0A1S3B8U9|A0A1S3B8U9_CUCME (uncharacterized protein LOC103487040 isoform X2 OS=Cucumis melo OX=3656 GN=LOC103487040 PE=4 SV=1) HSP 1 Score: 81.6 bits (200), Expect = 2.2e-12 Identity = 49/111 (44.14%), Postives = 76/111 (68.47%), Query Frame = 0
BLAST of Carg22916 vs. TrEMBL
Match: tr|A0A1S3B8T2|A0A1S3B8T2_CUCME (uncharacterized protein LOC103487040 isoform X1 OS=Cucumis melo OX=3656 GN=LOC103487040 PE=4 SV=1) HSP 1 Score: 81.6 bits (200), Expect = 2.2e-12 Identity = 49/111 (44.14%), Postives = 76/111 (68.47%), Query Frame = 0
BLAST of Carg22916 vs. TrEMBL
Match: tr|A0A0A0LG33|A0A0A0LG33_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G829020 PE=4 SV=1) HSP 1 Score: 79.0 bits (193), Expect = 1.4e-11 Identity = 50/111 (45.05%), Postives = 73/111 (65.77%), Query Frame = 0
BLAST of Carg22916 vs. TrEMBL
Match: tr|A0A2P5PW90|A0A2P5PW90_GOSBA (Uncharacterized protein OS=Gossypium barbadense OX=3634 GN=GOBAR_DD36577 PE=4 SV=1) HSP 1 Score: 62.0 bits (149), Expect = 1.8e-06 Identity = 39/117 (33.33%), Postives = 69/117 (58.97%), Query Frame = 0
BLAST of Carg22916 vs. TrEMBL
Match: tr|A0A0D2Q4G2|A0A0D2Q4G2_GOSRA (Uncharacterized protein OS=Gossypium raimondii OX=29730 GN=B456_001G258300 PE=4 SV=1) HSP 1 Score: 60.1 bits (144), Expect = 6.7e-06 Identity = 38/117 (32.48%), Postives = 69/117 (58.97%), Query Frame = 0
The following BLAST results are available for this feature:
GO Assignments
This gene is annotated with the following GO terms.
The following mRNA feature(s) are a part of this gene:
Analysis Name: InterPro Annotations of silver-seed gourd
Date Performed: 2019-03-07
The following gene(s) are orthologous to this gene:
The following gene(s) are paralogous to this gene:
The following block(s) are covering this gene:
|