Cp4.1LG02g11950 (gene) Cucurbita pepo (Zucchini)

Overview
NameCp4.1LG02g11950
Typegene
OrganismCucurbita pepo (Cucurbita pepo (Zucchini))
DescriptionGamma-interferon-inducible lysosomal thiol reductase
LocationCp4.1LG02 : 10919916 .. 10922692 (+)
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
TGTCCTTACGCGGGTCGTGGACATGGAAGATTCCTCAAGTTTAGCTTGCTTCCACATCCACAACAAGAATTAAATGTTTATTTAACAAAATTAGATTCATTCTTCCATTGCTATTGAATCTCTGGAAGCCATGGATTCTCCGCCTAAACTCTGTTCCCTCGCTTACATTTCTTATCTGCTGCTACTCTTGCTTTGCTCGTTCTTGTTTCCTGTTTCATCTACTTCATACTCCATAGCCACAACCTCCAATTATGGCACCGGAAAAGTTTCGCTCCAACTCTACTACGAGTCTCTCTGTCCTTACAGCGCCAATTTCATTGTGAACTATCTGCCAAAGCTTTTCGATGATGATCTCATCTCCATTGTTGATCTCAGGCTCGTCCCTTATGGTAACGCCAGGGTTGGTCGCAACGATTCCATCACTTGTCAGGTCCTCCGTTTAATTCGTTCATTAGATTCGTTGTTTTCTTTCTTGACGATTTCTGTTTCGGTTAATTACTAAATAAATGGCGTATTTCGTTTGTTTGCATGCTTGATTTGACTTCAGTGTTCTGTTGATTTAGGTATTTGGTTATGGTTTGTTCAGGGATGAGAAATTGGTAGTTGTTCGGAACCTTAGGTTTAAAATTGAATATGCAATTATGCGCGATTCTTCCGAATCTGATATGCTTTTGTTTATTGTATATTGTTCAACATAATAGCTTCTTCCTTGTTTACCATATTGTTCTTTGAAAGTCTCTCCGGGCTTATAATACGAATCTTGATATTGTTCTTTGAAAGTCTCTCCAATTTTATCATCAGTAAATCTGTTTATATTTCGAGATTGATATTCCTCCCTTACCTGATAGCTTAAGCTGTTTGATGTCCATGTTAGAGTTCTCTTTTCTGTTTCGTTTTAAGTTGGTGTTCATGATTTTATACTCTTTCTACACAGTTTAACTTGCCTATGGATGGCTGGATGTGCTTGCATCCATATAAACTGTCTAATAAACTTGTACTGTGTGGTTGTAATTTCAGCATGGCCCGAATGAATGCCTATTGAACACTGTGGAAGCCTGTGCCATTAACGCCTGGCCAGAGCTGGTAAGACTTCTGATGGGAGCATGACACTAGTCAGTTTCTTACAAAACCCTTTCCTTGTTTATTACATAGTTTCCATGTGTCATTATGATCANGCATGTAACTATGTGTCATTATGATCATTGATGATGGGTTTTTTCCATTTGCTTCGATCTGTACAAAGTTCTCCTTACTAATATTATTTTGCTACCCAATAATCTAATGGAATTGGTGGTGGATTGTCTGTTTATATATTTTTCTCTAATAGTCTTCTTGGAATTAAATGCTGAAACTCATTTCTTATATTACATATCTTTCAAAGTGAGTGAGTTGGAATTATGGGGATAAAAGTTCTCATGTACTTGTACTGCAGGATGGTCATTTTCCTTTCATTTACTGCATCGAGTATCTGGTGTCCAAACGGAAGTACACCCAGTGGGAGTCATGTTTTGAGAAGTTGGGGTTGAATCCCAAGCCAATCAATGAATGCTACCATACTGAGCTTGGGAAAATGGTGAGTTGTTTTAAATTACTCGGTTCAGATTTTTGTGTTAGTTCAAGTTTCATATATTGATAAGATATAACATTGTATAGAATACAAAGACTATGTAATGGTACCTACTCAACTAATCCTGTACTGCTGCAACGGGTTCTTAGTTTCCAACATATCTAGCTGTTATGATTTTCGACTGACTGAAGATTTCACAGATTTCATTGACTGAGCATTAGGTTCATAATCAGTTCCCGGTCTCTAGGTTGTGATTGGGTAAACAAACATAGAGATTATCGACAATTCAATATGGAATCAAATGTTCTATGTGTGATCCCACATCGGTTGGGGAGGAGAACGAAACACCCTTTATAAGAGTGTGGAAACCTCCCATTGCAGACGCATTTTAAAAACCTTGAGGGAAAGCTCGAAAGGGAAAGCCCAAAGAGGACAATATCTACTAGCGGTAGGCATGCGTCATTACATTCTATAATTTGATTTTTATCATCTTCGTGCAGCTTGAACTGAAATATGCTGCTGAAACCGGCAATCTTGAGCCTCCTCATAAGTACGTGCCTTGGGTTGTTGTAGATGGGAAACCACTTTATGAGGTTTGTTTCCTTCTTTCTGTTATGCTCACTAGTGTACGTACAAATTAACTGTTAAAATATCATCACTAGCCCAATAGAGTTAAGCCCAATAATGTACGAGCCATTGTATATTTATCTCAGTAGATATTTTAGAATAAAGATACTAGAGATTTTAGAGTTGTGTTCAATATTAACTGCATAAAGGTCTAGGCTTGAGTCATACAAACATCTACTTATAAGGATTATTATAACATTCCCTTGCTATAGGACTATGAAAACTTCATAAACTACATCTGTGAGGCGTATAAAGGACCTGTTCTGCCAAGTGCCTGTCATGCTTCGTCCATTAGTGCCATTTGAAGATGAAAAGCCAAGTCCAGCCTCCCAAATAGTGCAAGAAGACAGAGATGATGATAACGTTGATATAATAAACAAGAATACAATCGAGGTGATAGTGTTATTTATTCTACTGCTTGAATGATGTCACATTGTATGTACCCCCACACTCTGAAATCGTTCGGTTTAATTTATGGATAATGCACTTTTAGTAGTGAGATATGAATCGTTATCTATTTGGTCCATGAAATTTCAATAGAGACACTTTAGCCTCTTGAGTTTGCGAAGTCATTTTAAATGGT

mRNA sequence

TGTCCTTACGCGGGTCGTGGACATGGAAGATTCCTCAAGTTTAGCTTGCTTCCACATCCACAACAAGAATTAAATGTTTATTTAACAAAATTAGATTCATTCTTCCATTGCTATTGAATCTCTGGAAGCCATGGATTCTCCGCCTAAACTCTGTTCCCTCGCTTACATTTCTTATCTGCTGCTACTCTTGCTTTGCTCGTTCTTGTTTCCTGTTTCATCTACTTCATACTCCATAGCCACAACCTCCAATTATGGCACCGGAAAAGTTTCGCTCCAACTCTACTACGAGTCTCTCTGTCCTTACAGCGCCAATTTCATTGTGAACTATCTGCCAAAGCTTTTCGATGATGATCTCATCTCCATTGTTGATCTCAGGCTCGTCCCTTATGGTAACGCCAGGGTTGGTCGCAACGATTCCATCACTTGTCAGGTATTTGGTTATGGTTTGTTCAGGGATGAGAAATTGGTAGTTGTTCGGAACCTTAGGTTTAAAATTGAATATGCAATTATGCGCGATTCTTCCGAATCTGATATGCTTTTGTTTATTCATGGCCCGAATGAATGCCTATTGAACACTGTGGAAGCCTGTGCCATTAACGCCTGGCCAGAGCTGGATGGTCATTTTCCTTTCATTTACTGCATCGAGTATCTGGTGTCCAAACGGAAGTACACCCAGTGGGAGTCATGTTTTGAGAAGTTGGGGTTGAATCCCAAGCCAATCAATGAATGCTACCATACTGAGCTTGGGAAAATGGACTATGAAAACTTCATAAACTACATCTGTGAGGCGTATAAAGGACCTGTTCTGCCAAGTGCCTGTCATGCTTCGTCCATTAGTGCCATTTGAAGATGAAAAGCCAAGTCCAGCCTCCCAAATAGTGCAAGAAGACAGAGATGATGATAACGTTGATATAATAAACAAGAATACAATCGAGGTGATAGTGTTATTTATTCTACTGCTTGAATGATGTCACATTGTATGTACCCCCACACTCTGAAATCGTTCGGTTTAATTTATGGATAATGCACTTTTAGTAGTGAGATATGAATCGTTATCTATTTGGTCCATGAAATTTCAATAGAGACACTTTAGCCTCTTGAGTTTGCGAAGTCATTTTAAATGGT

Coding sequence (CDS)

ATGGATTCTCCGCCTAAACTCTGTTCCCTCGCTTACATTTCTTATCTGCTGCTACTCTTGCTTTGCTCGTTCTTGTTTCCTGTTTCATCTACTTCATACTCCATAGCCACAACCTCCAATTATGGCACCGGAAAAGTTTCGCTCCAACTCTACTACGAGTCTCTCTGTCCTTACAGCGCCAATTTCATTGTGAACTATCTGCCAAAGCTTTTCGATGATGATCTCATCTCCATTGTTGATCTCAGGCTCGTCCCTTATGGTAACGCCAGGGTTGGTCGCAACGATTCCATCACTTGTCAGGTATTTGGTTATGGTTTGTTCAGGGATGAGAAATTGGTAGTTGTTCGGAACCTTAGGTTTAAAATTGAATATGCAATTATGCGCGATTCTTCCGAATCTGATATGCTTTTGTTTATTCATGGCCCGAATGAATGCCTATTGAACACTGTGGAAGCCTGTGCCATTAACGCCTGGCCAGAGCTGGATGGTCATTTTCCTTTCATTTACTGCATCGAGTATCTGGTGTCCAAACGGAAGTACACCCAGTGGGAGTCATGTTTTGAGAAGTTGGGGTTGAATCCCAAGCCAATCAATGAATGCTACCATACTGAGCTTGGGAAAATGGACTATGAAAACTTCATAAACTACATCTGTGAGGCGTATAAAGGACCTGTTCTGCCAAGTGCCTGTCATGCTTCGTCCATTAGTGCCATTTGA

Protein sequence

MDSPPKLCSLAYISYLLLLLLCSFLFPVSSTSYSIATTSNYGTGKVSLQLYYESLCPYSANFIVNYLPKLFDDDLISIVDLRLVPYGNARVGRNDSITCQVFGYGLFRDEKLVVVRNLRFKIEYAIMRDSSESDMLLFIHGPNECLLNTVEACAINAWPELDGHFPFIYCIEYLVSKRKYTQWESCFEKLGLNPKPINECYHTELGKMDYENFINYICEAYKGPVLPSACHASSISAI
Homology
[Close]
BLAST of Cp4.1LG02g11950 vs. TrEMBL
Match: A0A0A0LXR3_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_1G533560 PE=4 SV=1)

HSP 1 Score: 208.4 bits (529), Expect = 9.8e-51
Identity = 128/269 (47.58%), Postives = 146/269 (54.28%), Query Frame = 1 

Query: 1   MDSPPKLCSLAYISYLLLLLLCSFLFPVSSTSYSIATTSNYGTGKVSLQLYYESLCPYSA 60
           M+SPPKL     ISYL+L L   FL        S A+TS YGT KVSL+LYYE       
Sbjct: 1   MESPPKLGFFLCISYLILFLSSFFLL-------SSASTSTYGTHKVSLKLYYE------- 60

Query: 61  NFIVNYLPKLFDDDLISIVDLRLVPYGNARVGRNDSITCQVFGYGLFRDEKLVVVRNLRF 120
             +  Y      + LI + D  L+           SI           D +LV   N R 
Sbjct: 61  -SLCPYSANFIVNYLIKLFDDDLI-----------SIV----------DLRLVPYGNARV 120

Query: 121 KIEYAIMRDSSESDMLLFIHGPNECLLNTVEACAINAWPELDGHFPFIYCIEYLVSKRKY 180
                       +D +   HGP+ECLLNT+EACAINAWPELDGHFPFIYC+EYLV KRKY
Sbjct: 121 ----------GRNDSITCQHGPSECLLNTMEACAINAWPELDGHFPFIYCVEYLVYKRKY 180

Query: 181 TQWESCFEKLGLNPKPINECYHTELGKM-------------------------------D 239
           TQWESCFEKLGLNPKPI++CY TELGK                                D
Sbjct: 181 TQWESCFEKLGLNPKPISDCYSTELGKKLELEYAAETDNLQPPHKYVPWVVVDGQPLYED 223

[Close]
BLAST of Cp4.1LG02g11950 vs. TrEMBL
Match: A0A061GYN1_THECC (Thioredoxin superfamily protein isoform 1 OS=Theobroma cacao GN=TCM_042205 PE=4 SV=1)

HSP 1 Score: 184.9 bits (468), Expect = 1.2e-43
Identity = 111/254 (43.70%), Postives = 134/254 (52.76%), Query Frame = 1 

Query: 18  LLLLCSF--LFPVSSTSYSIATTSNYGTGKVSLQLYYESLCPYSANFIVNYLPKLFDDDL 77
           L LLCS   L P SS S   A T    + KVSL LYYESLCPYSANFIVNYL KLF+DDL
Sbjct: 10  LSLLCSLFLLCPFSSAS---AITLPSDSHKVSLTLYYESLCPYSANFIVNYLGKLFEDDL 69

Query: 78  ISIVDLRLVPYGNARVGRNDSITCQVFGYGLFRDEKLVVVRNLRFKIEYAIMRDSSESDM 137
           +SIVDL                             +LV   N + K           +D 
Sbjct: 70  LSIVDL-----------------------------RLVPWGNAKLK----------GNDT 129

Query: 138 LLFIHGPNECLLNTVEACAINAWPELDGHFPFIYCIEYLVSKRKYTQWESCFEKLGLNPK 197
               HGP ECLLNT+EACAI+AWP+L+ HFPFIYC+E LV + KY +WESC+ KLGL+ K
Sbjct: 130 FACQHGPGECLLNTIEACAIDAWPQLNDHFPFIYCVETLVYELKYLEWESCYGKLGLDSK 189

Query: 198 PINECYHTELGKM-------------------------------DYENFINYICEAYKGP 239
           PI++CY   LG                                 DYEN+I+Y+C+AYKG 
Sbjct: 190 PISDCYSNGLGLKLELQYAAETNALEPPHKYVPWVVVDGQPLYEDYENYISYVCKAYKGA 221

[Close]
BLAST of Cp4.1LG02g11950 vs. TrEMBL
Match: A0A061GXJ7_THECC (Thioredoxin superfamily protein isoform 3 OS=Theobroma cacao GN=TCM_042205 PE=4 SV=1)

HSP 1 Score: 180.6 bits (457), Expect = 2.2e-42
Identity = 111/265 (41.89%), Postives = 134/265 (50.57%), Query Frame = 1 

Query: 18  LLLLCSF--LFPVSSTSYSIATTSNYGTGKVSLQLYYESLCPYSANFIVNYLPKLFDDDL 77
           L LLCS   L P SS S   A T    + KVSL LYYESLCPYSANFIVNYL KLF+DDL
Sbjct: 10  LSLLCSLFLLCPFSSAS---AITLPSDSHKVSLTLYYESLCPYSANFIVNYLGKLFEDDL 69

Query: 78  ISIVDLRLVPYGNARVGRNDSITCQVFGYGLFRDEKLVVVRNLRFKIEYAIMRDSSESDM 137
           +SIVDL                             +LV   N + K           +D 
Sbjct: 70  LSIVDL-----------------------------RLVPWGNAKLK----------GNDT 129

Query: 138 LLFIHGPNECLLNTVEACAINAWPELDGHFPFIYCIEYLVSKRKYTQWESCFEKLGLNPK 197
               HGP ECLLNT+EACAI+AWP+L+ HFPFIYC+E LV + KY +WESC+ KLGL+ K
Sbjct: 130 FACQHGPGECLLNTIEACAIDAWPQLNDHFPFIYCVETLVYELKYLEWESCYGKLGLDSK 189

Query: 198 PINECYHTELGK------------------------------------------MDYENF 239
           PI++CY   LG                                            DYEN+
Sbjct: 190 PISDCYSNGLGLKLELQYAAETNALEPPHKYVPWVVVDGQPLYEVRSLNYQINGKDYENY 232

[Close]
BLAST of Cp4.1LG02g11950 vs. TrEMBL
Match: A0A067LLY1_JATCU (Uncharacterized protein OS=Jatropha curcas GN=JCGZ_17387 PE=4 SV=1)

HSP 1 Score: 179.1 bits (453), Expect = 6.3e-42
Identity = 113/276 (40.94%), Postives = 143/276 (51.81%), Query Frame = 1 

Query: 1   MDSPPKLCSLAYISYLLLLLLCSFLFPVSSTSYSIATTSNYGTGKVSLQLYYESLCPYSA 60
           M SPPK+ +L+++ YL L   CSF            + ++  +GKVSL LYYESLCPYSA
Sbjct: 1   MASPPKI-TLSFLVYLCLF--CSF------------SRASSDSGKVSLGLYYESLCPYSA 60

Query: 61  NFIVNYLPKLFDDD-LISIVDLRLVPYGNARVGRNDSITCQVFGYGLFRDEKLVVVRNLR 120
           NFI+N L +LF+DD L S+VDL L P+                              N R
Sbjct: 61  NFIINDLVELFEDDELFSVVDLHLSPW-----------------------------GNAR 120

Query: 121 FKIEYAIMRDSSESDMLLFIHGPNECLLNTVEACAINAWPELDGHFPFIYCIEYLVSKRK 180
            K           +D  +  HGP+ECLLNTVEACAIN WP+L+ HFPFIYCIE LV +RK
Sbjct: 121 LK----------GNDSFVCQHGPSECLLNTVEACAINVWPQLEEHFPFIYCIESLVHERK 180

Query: 181 YTQWESCFEKLGLNPKPINECYHTELGK-------------------------------M 239
           + +WESCFE LGL+PKP+ +CY++  GK                                
Sbjct: 181 FPEWESCFETLGLDPKPVIDCYNSGYGKELELQYAAETNALQPPHQYVPWVVVDGQPLYE 222

[Close]
BLAST of Cp4.1LG02g11950 vs. TrEMBL
Match: A0A022PX44_ERYGU (Uncharacterized protein OS=Erythranthe guttata GN=MIMGU_mgv1a012187mg PE=4 SV=1)

HSP 1 Score: 168.3 bits (425), Expect = 1.1e-38
Identity = 99/250 (39.60%), Postives = 127/250 (50.80%), Query Frame = 1 

Query: 16  LLLLLLCSFLFPVSSTSYSIATTSNYGTGKVSLQLYYESLCPYSANFIVNYLPKLFDDDL 75
           L LLL+ S    +S +S S A  +  G  KVS ++YYE+LCPY +N IVNYL KLFD DL
Sbjct: 4   LRLLLILSI---ISYSSASPAVAAADGGDKVSFEIYYETLCPYCSNLIVNYLGKLFDSDL 63

Query: 76  ISIVDLRLVPYGNARVGRNDSITCQVFGYGLFRDEKLVVVRNLRFKIEYAIMRDSSESDM 135
           +SI D                              KLV   N + K    I         
Sbjct: 64  LSITDF-----------------------------KLVPYGNAKIKPNGTITCQ------ 123

Query: 136 LLFIHGPNECLLNTVEACAINAWPELDGHFPFIYCIEYLVSKRKYTQWESCFEKLGLNPK 195
               HG  EC+LNTVEACAI+AWP+L+ +FPF+YC+E LV +  YT WE+CF+KLGL+P 
Sbjct: 124 ----HGEWECILNTVEACAIDAWPDLNTYFPFVYCVESLVYEHNYTYWETCFDKLGLDPS 183

Query: 196 PINECYHTELGKM-------------------------------DYENFINYICEAYKGP 235
           P+  CY++E GK                                DY NF++YIC+AYKG 
Sbjct: 184 PVAACYNSERGKELILGYAADTQALEPPHKYVPWVVVDGEPLYDDYRNFVSYICKAYKGT 211

[Close]
BLAST of Cp4.1LG02g11950 vs. TAIR10
Match: AT1G07080.1 (AT1G07080.1 Thioredoxin superfamily protein)

HSP 1 Score: 131.7 bits (330), Expect = 5.9e-31
Identity = 91/251 (36.25%), Postives = 124/251 (49.40%), Query Frame = 1 

Query: 14  SYLLLLLLCS-FLFPVSSTSYSIATTSNYGTGKVSLQLYYESLCPYSANFIVNYLPKLFD 73
           S LL +L+C  FLFP +S+S     +    + KVS+ LYYESLCPY ++FIVN+L KLF+
Sbjct: 6   SKLLPVLVCYVFLFPFASSSDYSGVSLPSSSPKVSVGLYYESLCPYCSSFIVNHLAKLFE 65

Query: 74  DDLISIVDLRLVPYGNARVGRNDSIT--CQVFGYGLFRDEKLVVVRNLRFKIEYAIMRDS 133
           DDLISIVDL L P+GN ++ R+D++T  CQ   +  F D       +   K+        
Sbjct: 66  DDLISIVDLHLSPWGNTKL-RSDNVTAVCQHGAFECFLDTVEACAIDAWPKV-------- 125

Query: 134 SESDMLLFIHGPNECLLNTVEACAINAWPELDGHFPFIYCIEYLVSKRKYTQWESCFEKL 193
             SD   FI+                             C+E LV++ KY +WE+C+EKL
Sbjct: 126 --SDHFPFIY-----------------------------CVEKLVTEHKYDKWETCYEKL 185

Query: 194 GLNPKPINEC------------YHTELGKM-------------------DYENFINYICE 231
            LN KP+ +C            Y  E   +                   DYENFI+YIC+
Sbjct: 186 NLNSKPVADCLSSGHGNELALHYAAETNALQPPHKYVPWVVVDGQPLYEDYENFISYICK 216

[Close]
BLAST of Cp4.1LG02g11950 vs. TAIR10
Match: AT5G01580.1 (AT5G01580.1 gamma interferon responsive lysosomal thiol (GILT) reductase family protein)

HSP 1 Score: 111.7 bits (278), Expect = 6.3e-25
Identity = 72/234 (30.77%), Postives = 102/234 (43.59%), Query Frame = 1 

Query: 28  VSSTSYSIATTSNYGTGKVSLQLYYESLCPYSANFIVNYLPKLFDDDLISIVDLRLVPYG 87
           ++S +      S   + KV+L LYYE+LCP+ A FIVN LPK+F+  LIS +DL      
Sbjct: 9   ITSCTIFFCLLSLSSSQKVTLSLYYEALCPFCAEFIVNRLPKIFETGLISSIDL------ 68

Query: 88  NARVGRNDSITCQVFGYGLFRDEKLVVVRNLRFKIEYAIMRDSSESDMLLFIHGPNECLL 147
                       Q+  +G                   AI  D +    +L  HG  EC L
Sbjct: 69  ------------QLVPWG-----------------NAAIRPDGT----ILCQHGEAECAL 128

Query: 148 NTVEACAINAWPELDGHFPFIYCIEYLVSKRKYTQWESCFEKLGLNPKPINECYHTELGK 207
           N + ACAINA+P++  HF +IYC E LV + K  +W  C E +GL+   + +CY    G 
Sbjct: 129 NAIHACAINAYPDVMKHFGYIYCTEQLVLENKLEKWADCLEMVGLSRAAV-DCYINGYGN 188

Query: 208 M-------------------------------DYENFINYICEAYKGPVLPSAC 231
                                           +Y+NF+ Y+C AY    +P AC
Sbjct: 189 QLEQRYAEETSELYPAHRFVPWVVVNNLPLQENYQNFVMYVCNAYGSNQVPEAC 202

[Close]
BLAST of Cp4.1LG02g11950 vs. TAIR10
Match: AT4G12890.1 (AT4G12890.1 Gamma interferon responsive lysosomal thiol (GILT) reductase family protein)

HSP 1 Score: 105.1 bits (261), Expect = 5.9e-23
Identity = 76/232 (32.76%), Postives = 108/232 (46.55%), Query Frame = 1 

Query: 18  LLLLCSFLFPVSSTSYSIATTSNYGTGKVSLQLYYESLCPYSANFIVNYLPKLFDDDLIS 77
           L L C F+F  S+ +  +A  SN    KV + LYYESLCPY  NFIV+ L K+FD DL+ 
Sbjct: 16  LFLACLFVFTYSN-NLVVAENSN----KVKINLYYESLCPYCQNFIVDDLGKIFDSDLLK 75

Query: 78  IVDLRLVPYGNARVGRNDSITCQ------------VFGYGLFRDEKLVVVRNLRFKIEYA 137
           I DL+LVP+GNA +  N +ITCQ              G     D K      L++K    
Sbjct: 76  ITDLKLVPFGNAHISNNLTITCQHGEEECKLNALEACGIRTLPDPK------LQYKFIRC 135

Query: 138 IMRDSSESDMLLFIHGP----NECLLNTVEACAINAWPELDGHFPFIYCIEYLVSKRKYT 197
           + +D++E +  +   G     N+C    +    I  + +L            L  K +Y 
Sbjct: 136 VEKDTNEWESCVKKSGREKAINDCYNGDLSQKLILGYAKLTSS---------LKPKHEYV 195

Query: 198 QWESCFEKLGLNPKPINECYHTELGKMDYENFINYICEAYKGPVLPSACHAS 234
            W      + LN KP+ + YH         N +  +C+AYKG  LP  C +S
Sbjct: 196 PW------VTLNGKPLYDNYH---------NLVAQVCKAYKGKDLPKLCSSS 212

[Close]
BLAST of Cp4.1LG02g11950 vs. TAIR10
Match: AT4G12900.1 (AT4G12900.1 Gamma interferon responsive lysosomal thiol (GILT) reductase family protein)

HSP 1 Score: 76.6 bits (187), Expect = 2.2e-14
Identity = 45/129 (34.88%), Postives = 60/129 (46.51%), Query Frame = 1 

Query: 140 HGPNECLLNTVEACAINAWPELDGHFPFIYCIEYLVSKRKYTQWESCFEKLGLNPKPINE 199
           HG  EC LN +EACAI  WP    H+ FI C+E          WESC +K G   K IN+
Sbjct: 92  HGEEECKLNALEACAIRTWPNQRLHYKFIRCVE-----TNTNAWESCVKKYG-GEKAIND 151

Query: 200 CYHTEL----------------------------GKMDYEN---FINYICEAYKG-PVLP 237
           CY+ +L                            G+  YEN   F++ +C+AYKG   LP
Sbjct: 152 CYNGDLSKELILGYANQTLSLKPEHKYVPWMTLNGEPLYENIGDFVDLVCKAYKGKAALP 211

[Close]
BLAST of Cp4.1LG02g11950 vs. TAIR10
Match: AT4G12870.1 (AT4G12870.1 Gamma interferon responsive lysosomal thiol (GILT) reductase family protein)

HSP 1 Score: 73.2 bits (178), Expect = 2.5e-13
Identity = 72/253 (28.46%), Postives = 103/253 (40.71%), Query Frame = 1 

Query: 17  LLLLLCSFLFPVSSTSYSIATTSNYGTGKVSLQLYYESLCPYSANFIVNYLPKLFDDDLI 76
           L+   C  LF   + S+ + T  +    KV L LYYESLCP   +FIV        D+L+
Sbjct: 10  LVFFACFVLF---TFSHKLVTGES---DKVELNLYYESLCPGCQSFIV--------DELV 69

Query: 77  SIVDLRLVPYGNARVGRNDSITCQVFGYGLFRDEKLVVVRNLRFKIEYAIMRDSSESDML 136
            + D  L           D+IT          D KLV          YA +   S +  +
Sbjct: 70  KVFDSDL-----------DTIT----------DVKLV-------PFGYAKV---SNNLTV 129

Query: 137 LFIHGPNECLLNTVEACAINAWPELDGHFPFIYCIEYLVSKRKYTQWE-SCFEKLGLNPK 196
           +  HG  EC LN +EAC IN  P     + FI C+E          WE SC +  G N K
Sbjct: 130 ICQHGEEECKLNALEACVINTLPNPKSQYKFIRCVE-----NNTDNWESSCLKGYG-NEK 189

Query: 197 PINECYHTELGK-------------------------------MDYENFINYICEAYKGP 237
            IN+CY+++L K                                  ++ +  +C+AYKG 
Sbjct: 190 AINDCYNSDLSKKLILGYAKQTSSLKPKHEFVPWVTINSKPLYTKLDDLVGQVCKAYKGK 211

[Close]
BLAST of Cp4.1LG02g11950 vs. NCBI nr
Match: gi|449454993|ref|XP_004145238.1| (PREDICTED: gamma-interferon-inducible lysosomal thiol reductase-like [Cucumis sativus])

HSP 1 Score: 208.4 bits (529), Expect = 1.4e-50
Identity = 128/269 (47.58%), Postives = 146/269 (54.28%), Query Frame = 1 

Query: 1   MDSPPKLCSLAYISYLLLLLLCSFLFPVSSTSYSIATTSNYGTGKVSLQLYYESLCPYSA 60
           M+SPPKL     ISYL+L L   FL        S A+TS YGT KVSL+LYYE       
Sbjct: 1   MESPPKLGFFLCISYLILFLSSFFLL-------SSASTSTYGTHKVSLKLYYE------- 60

Query: 61  NFIVNYLPKLFDDDLISIVDLRLVPYGNARVGRNDSITCQVFGYGLFRDEKLVVVRNLRF 120
             +  Y      + LI + D  L+           SI           D +LV   N R 
Sbjct: 61  -SLCPYSANFIVNYLIKLFDDDLI-----------SIV----------DLRLVPYGNARV 120

Query: 121 KIEYAIMRDSSESDMLLFIHGPNECLLNTVEACAINAWPELDGHFPFIYCIEYLVSKRKY 180
                       +D +   HGP+ECLLNT+EACAINAWPELDGHFPFIYC+EYLV KRKY
Sbjct: 121 ----------GRNDSITCQHGPSECLLNTMEACAINAWPELDGHFPFIYCVEYLVYKRKY 180

Query: 181 TQWESCFEKLGLNPKPINECYHTELGKM-------------------------------D 239
           TQWESCFEKLGLNPKPI++CY TELGK                                D
Sbjct: 181 TQWESCFEKLGLNPKPISDCYSTELGKKLELEYAAETDNLQPPHKYVPWVVVDGQPLYED 223

[Close]
BLAST of Cp4.1LG02g11950 vs. NCBI nr
Match: gi|659115442|ref|XP_008457559.1| (PREDICTED: gamma-interferon-inducible lysosomal thiol reductase-like, partial [Cucumis melo])

HSP 1 Score: 204.1 bits (518), Expect = 2.6e-49
Identity = 121/243 (49.79%), Postives = 133/243 (54.73%), Query Frame = 1 

Query: 27  PVSSTSYSIATTSNYGTGKVSLQLYYESLCPYSANFIVNYLPKLFDDDLISIVDLRLVPY 86
           P S    S A+TSNYGT KVSL+LYYESL          Y      + L+ + D  L+  
Sbjct: 24  PPSFLLLSSASTSNYGTHKVSLKLYYESL--------CPYSANFIVNYLVKLFDDDLI-- 83

Query: 87  GNARVGRNDSITCQVFGYGLFRDEKLVVVRNLRFKIEYAIMRDSSESDMLLFIHGPNECL 146
                    SI           D  LV   N R             +D +   HGPNECL
Sbjct: 84  ---------SIV----------DLSLVPYGNARV----------GRNDSITCQHGPNECL 143

Query: 147 LNTVEACAINAWPELDGHFPFIYCIEYLVSKRKYTQWESCFEKLGLNPKPINECYHTELG 206
           LNTVEACAINAWPELDGHFPFIYC+EYLV KRKYTQWESCFEKLGLNPKPI++CY TELG
Sbjct: 144 LNTVEACAINAWPELDGHFPFIYCVEYLVYKRKYTQWESCFEKLGLNPKPISDCYKTELG 203

Query: 207 KM-------------------------------DYENFINYICEAYKGPVLPSACHASSI 239
           K                                DYENFINYICEAYKGPV P+AC ASSI
Sbjct: 204 KKLELEYAAETDNLQPPHKYVPWVVVDGQPLYEDYENFINYICEAYKGPVEPTACKASSI 227

[Close]
BLAST of Cp4.1LG02g11950 vs. NCBI nr
Match: gi|590591261|ref|XP_007016964.1| (Thioredoxin superfamily protein isoform 1 [Theobroma cacao])

HSP 1 Score: 184.9 bits (468), Expect = 1.7e-43
Identity = 111/254 (43.70%), Postives = 134/254 (52.76%), Query Frame = 1 

Query: 18  LLLLCSF--LFPVSSTSYSIATTSNYGTGKVSLQLYYESLCPYSANFIVNYLPKLFDDDL 77
           L LLCS   L P SS S   A T    + KVSL LYYESLCPYSANFIVNYL KLF+DDL
Sbjct: 10  LSLLCSLFLLCPFSSAS---AITLPSDSHKVSLTLYYESLCPYSANFIVNYLGKLFEDDL 69

Query: 78  ISIVDLRLVPYGNARVGRNDSITCQVFGYGLFRDEKLVVVRNLRFKIEYAIMRDSSESDM 137
           +SIVDL                             +LV   N + K           +D 
Sbjct: 70  LSIVDL-----------------------------RLVPWGNAKLK----------GNDT 129

Query: 138 LLFIHGPNECLLNTVEACAINAWPELDGHFPFIYCIEYLVSKRKYTQWESCFEKLGLNPK 197
               HGP ECLLNT+EACAI+AWP+L+ HFPFIYC+E LV + KY +WESC+ KLGL+ K
Sbjct: 130 FACQHGPGECLLNTIEACAIDAWPQLNDHFPFIYCVETLVYELKYLEWESCYGKLGLDSK 189

Query: 198 PINECYHTELGKM-------------------------------DYENFINYICEAYKGP 239
           PI++CY   LG                                 DYEN+I+Y+C+AYKG 
Sbjct: 190 PISDCYSNGLGLKLELQYAAETNALEPPHKYVPWVVVDGQPLYEDYENYISYVCKAYKGA 221

[Close]
BLAST of Cp4.1LG02g11950 vs. NCBI nr
Match: gi|1009116164|ref|XP_015874626.1| (PREDICTED: gamma-interferon-inducible lysosomal thiol reductase [Ziziphus jujuba])

HSP 1 Score: 182.6 bits (462), Expect = 8.2e-43
Identity = 112/259 (43.24%), Postives = 135/259 (52.12%), Query Frame = 1 

Query: 11  AYISYLLLLLLCSFLFPVSSTSYSIATTSNYGTGKVSLQLYYESLCPYSANFIVNYLPKL 70
           A +SYLL+L+  +F  P SS+S S A      + KVSL LYYESLCPYSANFIVNYL  +
Sbjct: 7   ALLSYLLILI--AFFSPTSSSS-SRAEIQPSDSEKVSLGLYYESLCPYSANFIVNYLVDI 66

Query: 71  FDDDLISIVDLRLVPYGNARVGRNDSITCQVFGYGLFRDEKLVVVRNLRFKIEYAIMRDS 130
           F +DLISIVDL                              LV   N R +         
Sbjct: 67  FQNDLISIVDL-----------------------------SLVPWGNARIR--------- 126

Query: 131 SESDMLLFIHGPNECLLNTVEACAINAWPELDGHFPFIYCIEYLVSKRKYTQWESCFEKL 190
             ++     HGP ECLLNTVEACAI+ WPEL+ HFPFIYCIE  V + K+T+WE CFEKL
Sbjct: 127 -PNNTFTCQHGPYECLLNTVEACAIDEWPELNVHFPFIYCIESFVHEHKHTEWEKCFEKL 186

Query: 191 GLNPKPINECYHTELGKM-------------------------------DYENFINYICE 239
            L+PK I  CY  E GK                                DYENF++YIC+
Sbjct: 187 DLDPKSITNCYTGESGKKLELQYAAETEALQPPHQYVPWVVVDGQPLYEDYENFLSYICK 223

[Close]
BLAST of Cp4.1LG02g11950 vs. NCBI nr
Match: gi|590591269|ref|XP_007016966.1| (Thioredoxin superfamily protein isoform 3 [Theobroma cacao])

HSP 1 Score: 180.6 bits (457), Expect = 3.1e-42
Identity = 111/265 (41.89%), Postives = 134/265 (50.57%), Query Frame = 1 

Query: 18  LLLLCSF--LFPVSSTSYSIATTSNYGTGKVSLQLYYESLCPYSANFIVNYLPKLFDDDL 77
           L LLCS   L P SS S   A T    + KVSL LYYESLCPYSANFIVNYL KLF+DDL
Sbjct: 10  LSLLCSLFLLCPFSSAS---AITLPSDSHKVSLTLYYESLCPYSANFIVNYLGKLFEDDL 69

Query: 78  ISIVDLRLVPYGNARVGRNDSITCQVFGYGLFRDEKLVVVRNLRFKIEYAIMRDSSESDM 137
           +SIVDL                             +LV   N + K           +D 
Sbjct: 70  LSIVDL-----------------------------RLVPWGNAKLK----------GNDT 129

Query: 138 LLFIHGPNECLLNTVEACAINAWPELDGHFPFIYCIEYLVSKRKYTQWESCFEKLGLNPK 197
               HGP ECLLNT+EACAI+AWP+L+ HFPFIYC+E LV + KY +WESC+ KLGL+ K
Sbjct: 130 FACQHGPGECLLNTIEACAIDAWPQLNDHFPFIYCVETLVYELKYLEWESCYGKLGLDSK 189

Query: 198 PINECYHTELGK------------------------------------------MDYENF 239
           PI++CY   LG                                            DYEN+
Sbjct: 190 PISDCYSNGLGLKLELQYAAETNALEPPHKYVPWVVVDGQPLYEVRSLNYQINGKDYENY 232

The following BLAST results are available for this feature:
BLAST of Cp4.1LG02g11950 vs. Swiss-Prot
Match NameE-valueIdentityDescription
BLAST of Cp4.1LG02g11950 vs. TrEMBL
Match NameE-valueIdentityDescription
A0A0A0LXR3_CUCSA9.8e-5147.58Uncharacterized protein OS=Cucumis sativus GN=Csa_1G533560 PE=4 SV=1[more]
A0A061GYN1_THECC1.2e-4343.70Thioredoxin superfamily protein isoform 1 OS=Theobroma cacao GN=TCM_042205 PE=4 ... [more]
A0A061GXJ7_THECC2.2e-4241.89Thioredoxin superfamily protein isoform 3 OS=Theobroma cacao GN=TCM_042205 PE=4 ... [more]
A0A067LLY1_JATCU6.3e-4240.94Uncharacterized protein OS=Jatropha curcas GN=JCGZ_17387 PE=4 SV=1[more]
A0A022PX44_ERYGU1.1e-3839.60Uncharacterized protein OS=Erythranthe guttata GN=MIMGU_mgv1a012187mg PE=4 SV=1[more]
BLAST of Cp4.1LG02g11950 vs. TAIR10
Match NameE-valueIdentityDescription
AT1G07080.15.9e-3136.25 Thioredoxin superfamily protein[more]
AT5G01580.16.3e-2530.77 gamma interferon responsive lysosomal thiol (GILT) reductase family ... [more]
AT4G12890.15.9e-2332.76 Gamma interferon responsive lysosomal thiol (GILT) reductase family ... [more]
AT4G12900.12.2e-1434.88 Gamma interferon responsive lysosomal thiol (GILT) reductase family ... [more]
AT4G12870.12.5e-1328.46 Gamma interferon responsive lysosomal thiol (GILT) reductase family ... [more]
BLAST of Cp4.1LG02g11950 vs. NCBI nr
Match NameE-valueIdentityDescription
gi|449454993|ref|XP_004145238.1|1.4e-5047.58PREDICTED: gamma-interferon-inducible lysosomal thiol reductase-like [Cucumis sa... [more]
gi|659115442|ref|XP_008457559.1|2.6e-4949.79PREDICTED: gamma-interferon-inducible lysosomal thiol reductase-like, partial [C... [more]
gi|590591261|ref|XP_007016964.1|1.7e-4343.70Thioredoxin superfamily protein isoform 1 [Theobroma cacao][more]
gi|1009116164|ref|XP_015874626.1|8.2e-4343.24PREDICTED: gamma-interferon-inducible lysosomal thiol reductase [Ziziphus jujuba... [more]
gi|590591269|ref|XP_007016966.1|3.1e-4241.89Thioredoxin superfamily protein isoform 3 [Theobroma cacao][more]
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: INTERPRO
TermDefinition
IPR004911Interferon-induced_GILT
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0008150 biological_process
cellular_component GO:0005575 cellular_component
molecular_function GO:0003674 molecular_function
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Cp4.1LG02g11950.1Cp4.1LG02g11950.1mRNA


InterPro
Analysis Name: InterPro Annotations of Cucurbita pepo
Date Performed: 2017-12-02
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR004911Gamma interferon inducible lysosomal thiol reductase GILTPANTHERPTHR13234GAMMA-INTERFERON INDUCIBLE LYSOSOMAL THIOL REDUCTASE GILTcoord: 45..100
score: 7.3E-44coord: 140..207
score: 7.3
IPR004911Gamma interferon inducible lysosomal thiol reductase GILTPFAMPF03227GILTcoord: 48..100
score: 1.3E-11coord: 139..189
score: 7.3
NoneNo IPR availablePANTHERPTHR13234:SF8GAMMA-INTERFERON-INDUCIBLE LYSOSOMAL THIOL REDUCTASEcoord: 140..207
score: 7.3E-44coord: 45..100
score: 7.3

Synteny
The following gene(s) are orthologous to this gene:

None

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:
GeneOrganismBlock
Cp4.1LG02g11950Cucumber (Gy14) v2cgybcpeB091
Cp4.1LG02g11950Silver-seed gourdcarcpeB0878
Cp4.1LG02g11950Melon (DHL92) v3.6.1cpemedB589
Cp4.1LG02g11950Silver-seed gourdcarcpeB0739
Cp4.1LG02g11950Cucumber (Chinese Long) v3cpecucB0658
Cp4.1LG02g11950Wax gourdcpewgoB0705
Cp4.1LG02g11950Cucurbita pepo (Zucchini)cpecpeB430
Cp4.1LG02g11950Cucumber (Gy14) v1cgycpeB0408
Cp4.1LG02g11950Cucurbita maxima (Rimu)cmacpeB245
Cp4.1LG02g11950Cucurbita maxima (Rimu)cmacpeB486
Cp4.1LG02g11950Cucurbita moschata (Rifu)cmocpeB211
Cp4.1LG02g11950Cucurbita moschata (Rifu)cmocpeB446
Cp4.1LG02g11950Wild cucumber (PI 183967)cpecpiB531
Cp4.1LG02g11950Cucumber (Chinese Long) v2cpecuB529
Cp4.1LG02g11950Bottle gourd (USVL1VR-Ls)cpelsiB447
Cp4.1LG02g11950Watermelon (Charleston Gray)cpewcgB503
Cp4.1LG02g11950Watermelon (97103) v1cpewmB551
Cp4.1LG02g11950Melon (DHL92) v3.5.1cpemeB496