Cp4.1LG01g07060 (gene) Cucurbita pepo (Zucchini)

Overview
NameCp4.1LG01g07060
Typegene
OrganismCucurbita pepo (Cucurbita pepo (Zucchini))
DescriptionUbiquitin-conjugating enzyme E2
LocationCp4.1LG01 : 3968246 .. 3971900 (+)
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGTATCCCCGTCAATCAAGCTTGGAATATGCCAATCCCAAATTGGAAGTGCCCACAGAATTTTGTAATGTTAAATTATTAAATTAAATAAATTTCATATTTATTTTACACTTTTAATTTAAATATTAAACTAAATTAAAATGATTTTTTTATTAATATTTTTTGAACACATAAACATAGTATTTCAATATTGCTGGATAAATGAAGTCCAACGTGTTCGTTGACAACAATCTGTTTCTTGAAGTATGTCGAATAAATATCTCTTACGTGTAGAAATTGAGAATTTGAGAAGATGGAGGACCAAAATGAAAATATAGGATTTTTTTTTTTTTTTTTTTTTTTCTAATTTAGAAAGGTGGTAATTTTAAAAGGAAAAAAGGAAGATATTAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAGGGAAGTAAATGGGAATGGAATAGGGTGTAGAGGAAGAGTGGGGAGTGGCGTTATAAGGCGTGGCCGGTCCACTTTGTCCCTTTCGTCAACATCATCGTCACATTTCGCATTAACTCTTTTCCTCCCCTTCTCTCTGCCATTGCGGAGCCAAACCCAAGCATGACCAGCTCCTCCGACTCCGCTCGTAAGGTTGTCCCTTTTCTTCTTCCTCATAATCATCTTTATCCTCATCGCCATCGCCATCGCCGTGTTTCATTCATCAATTTACTCTCATCTGATTCTGCTCTCCTAACTCTTCCTTTCGTATCTGATTTGATTCCTTTTCCAGGCTTTGAGTAAGATTGCTTGCAATCGGCTTCAGAAGGAACTGGTCGAGTGGCAGGTTAACCCTCCCGCTGGTTTTAAACACAAGGTTACCGATAATCTCCAGAGGTATTGCTTCTTCCCCTTTTCTCGTAGGGTTTTTTTTAATTCGTATTTTCTGTTTATTTGCCTTCTGCGTCATTGTTAGCGCTCTGGAAAGTAAGAAAAAGGCTGGAATTTGATGTAATAGCGTCGAATTGGTGTTGTTGGGTGCCTTGGGGTGGGGCTTAGTTTAGGTTTGATTGTGTCGTGCTCTCCCTATTATCGACAGTGGAGGTTCTTAATTTTTCCTTTGAAATCGAAGTGAGGTTTTCTTGTTTCTGTTCTTTGTCTGTAGTGTGTTCTGAAAGGAAATTTACTATCTGCTTTTAGTAGGAATTTGACGTTCATTTTTGGATTTATTTTATTTTATTTTATTTTATTTTGTTGGAAGATGGGTGATTGAAGTCAACGGAGCTCCGGGAACTCTCTATGCAAATGAAACCTACCAGCTTCAGGTGGACTTCCCTGAGCATTACCCAATGGAAGCCCCACAGGTGTATAAACATAATCATTGAATTCTGAGATCATTTCTTCCATAATCCTGTGTAGTGTCTAAATTTATTGATTGTTGTGTGTTTGATTTTGTATACCGGTTTCATAACAGGTTATATTTCTGCATCCAGCCCCTCTTCATCCTCATATCTATAGCAATGGTCACATTTGTCTAGGTTGGTATATGGATAATTTTCTATTGCTTGTTCTTGTTGGATATTCTTTTCTTTGTGTGTATAGATTTCTTTGTGGTTATATCGTTTGCTTCACCATTTCACTCTATTTATGAGATTGCAATTAGGAAGGAATATAAAGTTTATATTCTATTGCTTTCTTCACTCTTTTGTTTATGTTTAGAATTTTTTTTCCATCTACCCTGTTTGAGCCTAATGCGGTCTATAAGGAGTTTTGTTTTTAGTATTTGTGTCAGGGGTCACACTTCAGATGGATGTTCAATAATAGTAATGGTGTTTAATTGAATTCGACCCAAGAAGATATCTCAATTGGGGACGTTAATAGATCTTTTACCATACAGTGGCACGTTGCATGTAAGCTTATCAGTGGTTCATCATGGAGAACCTGAATGATTTAATGTTACAGAAAGGTTTTGATATATATCCTGTCCTATTAGGACAACGTGTTGCTTACCTCTATTATGTTTAAAACTTTTCAATTACACAAAATAGAAGTATAAACTAGTCTTGCAATGAAAAATAAAAGAAAAAGAAGAGGAAGTACTGTTTGATATTGGATTCCGTTCTTTTTGTTAATAGCTAGTTTGTATGGATGAAAAGATCCTCTATGCTGAAAAGTTATTGCAGGATGAGTGTTTATCATGGTATTTACTAGGTGTTCATTGGTCGGGTTTGTTTTGAAATCTTTCAACCATTTGGTTATATGTCTATATATGTAATGAATAAGAACAGAACCATACTGCTCAACACTTAAATCCAAAACAATACCAATTCATCCATCAATATGTTTCTTTGTATCATTCATAACCTCTTTCAATTGTTTGGGAAACTTTTGTTTTTTTCCCCCCCGAATGTTATGTTTGCTGATTGAAATGAAATATAAATACCATAAAGTTCATCAAATCTGCAAAATGAATAAAACTAATTTCTATTACATGTTAGATTGTAATTGTTTTATAACCTAAGTCTTTAAAACTTGACTTTAGATTTTGCAGGGCATCATTAATCATGTAATATTTTAAATTATTTAGGTGTAAATATTCGTTCATTTTAGCAATCTAAGTTTTATTAATCTGTTTCGTTTGGTTTGCTTTAGACAGAAATTTGTCAAGCTGAACCAAACTATCATTGCTGGTTTTGTTTGGTCTGAACAAAAGGAAAGGAATCTCAAACCAAGCCAATTTAGTTTGGATCATTGGTTTGGTCTTGAATACCTCTATCATTTGCAATGGATGTAGTTTGAAGGTGAAGTTGGAAATATGCTTTCTGCAACTTGCTAGTTGCTCAGATGCACATTACCTGCGAGATTGAGATGATGTGTTTTCTAATAATTTAATATGTTGGTGTTAAAGTTTCGNCTAATAATTTAATATGTTGGTGTTAAAGTTTCGTCTTGCCTTTTCCTCTCGTACATGTTTCTAACTATTGATACTGTTTGTTGCTCGTGCTTGTTTGAGTTTTGAATTCTATCCTAGTCGTGTATATCTATTGTATGGCTTTATTTATGGTCTATTATTGGCTTTGTCTGAGTGCTTTAGTTATCACCTCCATACCAACACTGACCATTGTTATTTCCCTTCACTCTGAAACCGTGTAGATATTTTATATGATTCATGGTCGCCTGCAATGACTGTAAGTTCTATCTGTATCAGCATTCTCTCCATGTTGTCGAGCTCGACAGCAAAGGTCTGTTACACTTCATGCCACTTCATGCCACTTTGATCCTATTGTATAATTAATATGTTTTTCATGGAGGGTAACGAAATTGTTAAGATATAACTTGTAAGGACGTGTTGTGTGTACTAACTTCAACCAGAATCCTTCTCTGATAGTCTAATGTTTTCTATTGCAGCAACGCCCTGACGATAACGACCGTTATGTAAAGAATTGTAGGAATGGAAGATCCCCAAAAGAGACGAGGTGGTGGTTCCATGACGATAAGGTGTAACAACGTAAGATCTTCCATTGTTATGCCTGTGGCTTCCCTTGTTTGTAAGGTGAAAGAAGTAGAAAGTGATTATGGAAAAAGAAAACCAAGTAAAGTGGTAAGGCCTGGCATTTGTAAAGGAAGATCAATTTATGTTTCTTACTAATGTCTAAAGAACAACTTCTCTTGTCCTTTCTTGGGGGTGGGTTATCCT

mRNA sequence

ATGTATCCCCGTCAATCAAGCTTGGAATATGCCAATCCCAAATTGGAAGTGCCCACAGAATTTTGTAATGTTAAATTATTAAATTAAATAAATTTCATATTTATTTTACACTTTTAATTTAAATATTAAACTAAATTAAAATGATTTTTTTATTAATATTTTTTGAACACATAAACATAGTATTTCAATATTGCTGGATAAATGAAGTCCAACGTGTTCGTTGACAACAATCTGTTTCTTGAAGTATGTCGAATAAATATCTCTTACGTGTAGAAATTGAGAATTTGAGAAGATGGAGGACCAAAATGAAAATATAGGATTTTTTTTTTTTTTTTTTTTTTTCTAATTTAGAAAGGTGGTAATTTTAAAAGGAAAAAAGGAAGATATTAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAGGGAAGTAAATGGGAATGGAATAGGGTGTAGAGGAAGAGTGGGGAGTGGCGTTATAAGGCGTGGCCGGTCCACTTTGTCCCTTTCGTCAACATCATCGTCACATTTCGCATTAACTCTTTTCCTCCCCTTCTCTCTGCCATTGCGGAGCCAAACCCAAGCATGACCAGCTCCTCCGACTCCGCTCGTAAGGCTTTGAGTAAGATTGCTTGCAATCGGCTTCAGAAGGAACTGGTCGAGTGGCAGGTTAACCCTCCCGCTGGTTTTAAACACAAGGTTACCGATAATCTCCAGAGATGGGTGATTGAAGTCAACGGAGCTCCGGGAACTCTCTATGCAAATGAAACCTACCAGCTTCAGGTGGACTTCCCTGAGCATTACCCAATGGAAGCCCCACAGGTTATATTTCTGCATCCAGCCCCTCTTCATCCTCATATCTATAGCAATGGTCACATTTGTCTAGATATTTTATATGATTCATGGTCGCCTGCAATGACTGTAAGTTCTATCTGTATCAGCATTCTCTCCATGTTGTCGAGCTCGACAGCAAAGCAACGCCCTGACGATAACGACCGTTATGTAAAGAATTGTAGGAATGGAAGATCCCCAAAAGAGACGAGGTGGTGGTTCCATGACGATAAGGTGTAACAACGTAAGATCTTCCATTGTTATGCCTGTGGCTTCCCTTGTTTGTAAGGTGAAAGAAGTAGAAAGTGATTATGGAAAAAGAAAACCAAGTAAAGTGGTAAGGCCTGGCATTTGTAAAGGAAGATCAATTTATGTTTCTTACTAATGTCTAAAGAACAACTTCTCTTGTCCTTTCTTGGGGGTGGGTTATCCT

Coding sequence (CDS)

ATGACCAGCTCCTCCGACTCCGCTCGTAAGGCTTTGAGTAAGATTGCTTGCAATCGGCTTCAGAAGGAACTGGTCGAGTGGCAGGTTAACCCTCCCGCTGGTTTTAAACACAAGGTTACCGATAATCTCCAGAGATGGGTGATTGAAGTCAACGGAGCTCCGGGAACTCTCTATGCAAATGAAACCTACCAGCTTCAGGTGGACTTCCCTGAGCATTACCCAATGGAAGCCCCACAGGTTATATTTCTGCATCCAGCCCCTCTTCATCCTCATATCTATAGCAATGGTCACATTTGTCTAGATATTTTATATGATTCATGGTCGCCTGCAATGACTGTAAGTTCTATCTGTATCAGCATTCTCTCCATGTTGTCGAGCTCGACAGCAAAGCAACGCCCTGACGATAACGACCGTTATGTAAAGAATTGTAGGAATGGAAGATCCCCAAAAGAGACGAGGTGGTGGTTCCATGACGATAAGGTGTAA

Protein sequence

MTSSSDSARKALSKIACNRLQKELVEWQVNPPAGFKHKVTDNLQRWVIEVNGAPGTLYANETYQLQVDFPEHYPMEAPQVIFLHPAPLHPHIYSNGHICLDILYDSWSPAMTVSSICISILSMLSSSTAKQRPDDNDRYVKNCRNGRSPKETRWWFHDDKV
Homology
[Close]
BLAST of Cp4.1LG01g07060 vs. Swiss-Prot
Match: UBC16_ARATH (Probable ubiquitin-conjugating enzyme E2 16 OS=Arabidopsis thaliana GN=UBC16 PE=2 SV=1)

HSP 1 Score: 311.2 bits (796), Expect = 6.5e-84
Identity = 145/161 (90.06%), Postives = 152/161 (94.41%), Query Frame = 1 

Query: 1   MTSSSDSARKALSKIACNRLQKELVEWQVNPPAGFKHKVTDNLQRWVIEVNGAPGTLYAN 60
           M+SS   +RK LSKIA NRLQKELVEWQ+NPP GFKHKVTDNLQRW+IEV GAPGTLYAN
Sbjct: 1   MSSSGAPSRKTLSKIATNRLQKELVEWQMNPPTGFKHKVTDNLQRWIIEVIGAPGTLYAN 60

Query: 61  ETYQLQVDFPEHYPMEAPQVIFLHPAPLHPHIYSNGHICLDILYDSWSPAMTVSSICISI 120
           +TYQLQVDFPEHYPME+PQVIFLHPAPLHPHIYSNGHICLDILYDSWSPAMTVSSICISI
Sbjct: 61  DTYQLQVDFPEHYPMESPQVIFLHPAPLHPHIYSNGHICLDILYDSWSPAMTVSSICISI 120

Query: 121 LSMLSSSTAKQRPDDNDRYVKNCRNGRSPKETRWWFHDDKV 162
           LSMLSSST KQRP DNDRYVKNC+NGRSPKETRWWFHDDKV
Sbjct: 121 LSMLSSSTEKQRPTDNDRYVKNCKNGRSPKETRWWFHDDKV 161

[Close]
BLAST of Cp4.1LG01g07060 vs. Swiss-Prot
Match: UBC18_ARATH (Probable ubiquitin-conjugating enzyme E2 18 OS=Arabidopsis thaliana GN=UBC18 PE=2 SV=1)

HSP 1 Score: 308.5 bits (789), Expect = 4.2e-83
Identity = 143/161 (88.82%), Postives = 151/161 (93.79%), Query Frame = 1 

Query: 1   MTSSSDSARKALSKIACNRLQKELVEWQVNPPAGFKHKVTDNLQRWVIEVNGAPGTLYAN 60
           MTSSS  +RKALSKIACNRLQKEL EWQVNPP GFKH+VTDNLQ+WVIEV GAPGTLYAN
Sbjct: 1   MTSSSSPSRKALSKIACNRLQKELSEWQVNPPTGFKHRVTDNLQKWVIEVTGAPGTLYAN 60

Query: 61  ETYQLQVDFPEHYPMEAPQVIFLHPAPLHPHIYSNGHICLDILYDSWSPAMTVSSICISI 120
           ETY LQV+FP+HYPMEAPQVIF+ PAPLHPHIYSNGHICLDILYDSWSPAMTVSS+CISI
Sbjct: 61  ETYNLQVEFPQHYPMEAPQVIFVPPAPLHPHIYSNGHICLDILYDSWSPAMTVSSVCISI 120

Query: 121 LSMLSSSTAKQRPDDNDRYVKNCRNGRSPKETRWWFHDDKV 162
           LSMLSSS  KQRP DNDRYVKNC+NGRSPKETRWWFHDDKV
Sbjct: 121 LSMLSSSPEKQRPTDNDRYVKNCKNGRSPKETRWWFHDDKV 161

[Close]
BLAST of Cp4.1LG01g07060 vs. Swiss-Prot
Match: UBC15_ARATH (Ubiquitin-conjugating enzyme 15 OS=Arabidopsis thaliana GN=UBC15 PE=2 SV=2)

HSP 1 Score: 305.1 bits (780), Expect = 4.7e-82
Identity = 140/161 (86.96%), Postives = 151/161 (93.79%), Query Frame = 1 

Query: 1   MTSSSDSARKALSKIACNRLQKELVEWQVNPPAGFKHKVTDNLQRWVIEVNGAPGTLYAN 60
           MTSSS  +RKALSKIACNRLQKEL EWQ+NPP GF+HKVTDNLQ+W I+V GAPGTLYAN
Sbjct: 1   MTSSSAPSRKALSKIACNRLQKELSEWQLNPPTGFRHKVTDNLQKWTIDVTGAPGTLYAN 60

Query: 61  ETYQLQVDFPEHYPMEAPQVIFLHPAPLHPHIYSNGHICLDILYDSWSPAMTVSSICISI 120
           ETYQLQV+FPEHYPMEAPQV+F+ PAP HPHIYSNGHICLDILYDSWSPAMTV+S+CISI
Sbjct: 61  ETYQLQVEFPEHYPMEAPQVVFVSPAPSHPHIYSNGHICLDILYDSWSPAMTVNSVCISI 120

Query: 121 LSMLSSSTAKQRPDDNDRYVKNCRNGRSPKETRWWFHDDKV 162
           LSMLSSS AKQRP DNDRYVKNC+NGRSPKETRWWFHDDKV
Sbjct: 121 LSMLSSSPAKQRPADNDRYVKNCKNGRSPKETRWWFHDDKV 161

[Close]
BLAST of Cp4.1LG01g07060 vs. Swiss-Prot
Match: UBC17_ARATH (Probable ubiquitin-conjugating enzyme E2 17 OS=Arabidopsis thaliana GN=UBC17 PE=2 SV=1)

HSP 1 Score: 292.0 bits (746), Expect = 4.1e-78
Identity = 132/161 (81.99%), Postives = 149/161 (92.55%), Query Frame = 1 

Query: 1   MTSSSDSARKALSKIACNRLQKELVEWQVNPPAGFKHKVTDNLQRWVIEVNGAPGTLYAN 60
           MTSSS+S RK L+KIA NRLQKE +EWQ NPP+GFKH+V+DNLQRW+IEV+G PGTLYAN
Sbjct: 1   MTSSSESTRKGLTKIATNRLQKEFMEWQTNPPSGFKHRVSDNLQRWIIEVHGVPGTLYAN 60

Query: 61  ETYQLQVDFPEHYPMEAPQVIFLHPAPLHPHIYSNGHICLDILYDSWSPAMTVSSICISI 120
           ETYQLQV+FPEHYPMEAPQVIF HPAPLHPHIYSNGHICLD+LYDSWSPAM +SSIC+SI
Sbjct: 61  ETYQLQVEFPEHYPMEAPQVIFQHPAPLHPHIYSNGHICLDVLYDSWSPAMRLSSICLSI 120

Query: 121 LSMLSSSTAKQRPDDNDRYVKNCRNGRSPKETRWWFHDDKV 162
           LSMLSSS+ KQ+P DND Y+KNC++GRSPKETRW FHDDKV
Sbjct: 121 LSMLSSSSVKQKPKDNDHYLKNCKHGRSPKETRWRFHDDKV 161

[Close]
BLAST of Cp4.1LG01g07060 vs. Swiss-Prot
Match: UBE2W_DICDI (Probable ubiquitin-conjugating enzyme E2 W OS=Dictyostelium discoideum GN=ube2w PE=3 SV=1)

HSP 1 Score: 174.1 bits (440), Expect = 1.2e-42
Identity = 81/143 (56.64%), Postives = 103/143 (72.03%), Query Frame = 1 

Query: 19  RLQKELVEWQVNPPAGFKHKVTDNLQRWVIEVNGAPGTLYANETYQLQVDFPEHYPMEAP 78
           RLQKEL++ + NPP        DNL +WVI V+G  G++Y  E ++LQ  F   YP+++P
Sbjct: 8   RLQKELLDLKTNPPPCISITEGDNLDKWVIAVDGTEGSIYQGEHFKLQFKFSSGYPLDSP 67

Query: 79  QVIFLHPAPLHPHIYSNGHICLDILYDSWSPAMTVSSICISILSMLSSSTAKQRPDDNDR 138
           +VIF+   P+HPHIYSNGHICL ILYD+WSPA+TVSS+C+SILSMLS  T K RP D+ +
Sbjct: 68  EVIFIGTPPIHPHIYSNGHICLSILYDNWSPALTVSSVCLSILSMLSGCTEKIRPTDDSK 127

Query: 139 YVKNCRNGRSPKETRWWFHDDKV 162
           YV    N +SPKE RW FHDD V
Sbjct: 128 YVSRVLN-KSPKEVRWMFHDDTV 149

[Close]
BLAST of Cp4.1LG01g07060 vs. TrEMBL
Match: A0A0A0KUH0_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_4G045000 PE=3 SV=1)

HSP 1 Score: 337.8 bits (865), Expect = 7.2e-90
Identity = 160/161 (99.38%), Postives = 160/161 (99.38%), Query Frame = 1 

Query: 1   MTSSSDSARKALSKIACNRLQKELVEWQVNPPAGFKHKVTDNLQRWVIEVNGAPGTLYAN 60
           MTSSSDSA KALSKIACNRLQKELVEWQVNPPAGFKHKVTDNLQRWVIEVNGAPGTLYAN
Sbjct: 1   MTSSSDSALKALSKIACNRLQKELVEWQVNPPAGFKHKVTDNLQRWVIEVNGAPGTLYAN 60

Query: 61  ETYQLQVDFPEHYPMEAPQVIFLHPAPLHPHIYSNGHICLDILYDSWSPAMTVSSICISI 120
           ETYQLQVDFPEHYPMEAPQVIFLHPAPLHPHIYSNGHICLDILYDSWSPAMTVSSICISI
Sbjct: 61  ETYQLQVDFPEHYPMEAPQVIFLHPAPLHPHIYSNGHICLDILYDSWSPAMTVSSICISI 120

Query: 121 LSMLSSSTAKQRPDDNDRYVKNCRNGRSPKETRWWFHDDKV 162
           LSMLSSSTAKQRPDDNDRYVKNCRNGRSPKETRWWFHDDKV
Sbjct: 121 LSMLSSSTAKQRPDDNDRYVKNCRNGRSPKETRWWFHDDKV 161

[Close]
BLAST of Cp4.1LG01g07060 vs. TrEMBL
Match: A0A061DLV4_THECC (Ubiquitin-conjugating enzyme 16 OS=Theobroma cacao GN=TCM_000290 PE=3 SV=1)

HSP 1 Score: 333.2 bits (853), Expect = 1.8e-88
Identity = 157/161 (97.52%), Postives = 159/161 (98.76%), Query Frame = 1 

Query: 1   MTSSSDSARKALSKIACNRLQKELVEWQVNPPAGFKHKVTDNLQRWVIEVNGAPGTLYAN 60
           MTSSS SARKALSKIACNRLQKELVEWQVNPP+GFKHKVTDNLQRWVIEVNGAPGTLYAN
Sbjct: 1   MTSSSASARKALSKIACNRLQKELVEWQVNPPSGFKHKVTDNLQRWVIEVNGAPGTLYAN 60

Query: 61  ETYQLQVDFPEHYPMEAPQVIFLHPAPLHPHIYSNGHICLDILYDSWSPAMTVSSICISI 120
           ETYQLQVDFPEHYPMEAPQVIFLHPAPLHPHIYSNGHICLDILYDSWSPAMTVSSICISI
Sbjct: 61  ETYQLQVDFPEHYPMEAPQVIFLHPAPLHPHIYSNGHICLDILYDSWSPAMTVSSICISI 120

Query: 121 LSMLSSSTAKQRPDDNDRYVKNCRNGRSPKETRWWFHDDKV 162
           LSMLSSST KQRP+DNDRYVKNCRNGRSPKETRWWFHDDKV
Sbjct: 121 LSMLSSSTVKQRPEDNDRYVKNCRNGRSPKETRWWFHDDKV 161

[Close]
BLAST of Cp4.1LG01g07060 vs. TrEMBL
Match: A0A067KYV1_JATCU (Uncharacterized protein OS=Jatropha curcas GN=JCGZ_08281 PE=3 SV=1)

HSP 1 Score: 331.3 bits (848), Expect = 6.8e-88
Identity = 155/161 (96.27%), Postives = 158/161 (98.14%), Query Frame = 1 

Query: 1   MTSSSDSARKALSKIACNRLQKELVEWQVNPPAGFKHKVTDNLQRWVIEVNGAPGTLYAN 60
           MTSSS +ARKALSKIACNRLQKELVEWQVNPP GFKHKVTDNLQRWVIEVNGAPGTLYAN
Sbjct: 1   MTSSSANARKALSKIACNRLQKELVEWQVNPPTGFKHKVTDNLQRWVIEVNGAPGTLYAN 60

Query: 61  ETYQLQVDFPEHYPMEAPQVIFLHPAPLHPHIYSNGHICLDILYDSWSPAMTVSSICISI 120
           ETYQLQVDFPEHYPMEAPQVIFLHPAPLHPHIYSNGHICLDILYDSWSPAMTVSS+CISI
Sbjct: 61  ETYQLQVDFPEHYPMEAPQVIFLHPAPLHPHIYSNGHICLDILYDSWSPAMTVSSVCISI 120

Query: 121 LSMLSSSTAKQRPDDNDRYVKNCRNGRSPKETRWWFHDDKV 162
           LSMLSSST KQRP+DNDRYVKNCRNGRSPKETRWWFHDDKV
Sbjct: 121 LSMLSSSTVKQRPEDNDRYVKNCRNGRSPKETRWWFHDDKV 161

[Close]
BLAST of Cp4.1LG01g07060 vs. TrEMBL
Match: W9SBS2_9ROSA (Putative ubiquitin-conjugating enzyme E2 16 OS=Morus notabilis GN=L484_013245 PE=3 SV=1)

HSP 1 Score: 328.6 bits (841), Expect = 4.4e-87
Identity = 155/161 (96.27%), Postives = 158/161 (98.14%), Query Frame = 1 

Query: 1   MTSSSDSARKALSKIACNRLQKELVEWQVNPPAGFKHKVTDNLQRWVIEVNGAPGTLYAN 60
           MTSSS +ARKALSKIACNRLQKEL+EWQVNPPAGFKHKVTDNLQRWVIEV GAPGTLYAN
Sbjct: 1   MTSSSANARKALSKIACNRLQKELLEWQVNPPAGFKHKVTDNLQRWVIEVIGAPGTLYAN 60

Query: 61  ETYQLQVDFPEHYPMEAPQVIFLHPAPLHPHIYSNGHICLDILYDSWSPAMTVSSICISI 120
           ETYQLQVDFPEHYPMEAPQVIFLHPAPLHPHIYSNGHICLDILYDSWSPAMTVSSICISI
Sbjct: 61  ETYQLQVDFPEHYPMEAPQVIFLHPAPLHPHIYSNGHICLDILYDSWSPAMTVSSICISI 120

Query: 121 LSMLSSSTAKQRPDDNDRYVKNCRNGRSPKETRWWFHDDKV 162
           LSMLSSST KQRP+DNDRYVKNCRNGRSPKETRWWFHDDKV
Sbjct: 121 LSMLSSSTVKQRPEDNDRYVKNCRNGRSPKETRWWFHDDKV 161

[Close]
BLAST of Cp4.1LG01g07060 vs. TrEMBL
Match: B9MXK5_POPTR (UBIQUITIN-CONJUGATING ENZYME 17 family protein OS=Populus trichocarpa GN=POPTR_0005s12060g PE=3 SV=1)

HSP 1 Score: 326.6 bits (836), Expect = 1.7e-86
Identity = 153/161 (95.03%), Postives = 156/161 (96.89%), Query Frame = 1 

Query: 1   MTSSSDSARKALSKIACNRLQKELVEWQVNPPAGFKHKVTDNLQRWVIEVNGAPGTLYAN 60
           MTSSS + RKALSKIACNRLQKELVEWQVNPP GFKHKVTDNLQRWVIEV GAPGTLYAN
Sbjct: 1   MTSSSTTTRKALSKIACNRLQKELVEWQVNPPTGFKHKVTDNLQRWVIEVIGAPGTLYAN 60

Query: 61  ETYQLQVDFPEHYPMEAPQVIFLHPAPLHPHIYSNGHICLDILYDSWSPAMTVSSICISI 120
           ETYQLQVDFPEHYPMEAPQVIFLHPAPLHPHIYSNGHICLDILYDSWSPAMTVSS+CISI
Sbjct: 61  ETYQLQVDFPEHYPMEAPQVIFLHPAPLHPHIYSNGHICLDILYDSWSPAMTVSSVCISI 120

Query: 121 LSMLSSSTAKQRPDDNDRYVKNCRNGRSPKETRWWFHDDKV 162
           LSMLSSST KQRP+DNDRYVKNCRNGRSPKETRWWFHDDKV
Sbjct: 121 LSMLSSSTVKQRPEDNDRYVKNCRNGRSPKETRWWFHDDKV 161

[Close]
BLAST of Cp4.1LG01g07060 vs. TAIR10
Match: AT1G75440.1 (AT1G75440.1 ubiquitin-conjugating enzyme 16)

HSP 1 Score: 311.2 bits (796), Expect = 3.7e-85
Identity = 145/161 (90.06%), Postives = 152/161 (94.41%), Query Frame = 1 

Query: 1   MTSSSDSARKALSKIACNRLQKELVEWQVNPPAGFKHKVTDNLQRWVIEVNGAPGTLYAN 60
           M+SS   +RK LSKIA NRLQKELVEWQ+NPP GFKHKVTDNLQRW+IEV GAPGTLYAN
Sbjct: 1   MSSSGAPSRKTLSKIATNRLQKELVEWQMNPPTGFKHKVTDNLQRWIIEVIGAPGTLYAN 60

Query: 61  ETYQLQVDFPEHYPMEAPQVIFLHPAPLHPHIYSNGHICLDILYDSWSPAMTVSSICISI 120
           +TYQLQVDFPEHYPME+PQVIFLHPAPLHPHIYSNGHICLDILYDSWSPAMTVSSICISI
Sbjct: 61  DTYQLQVDFPEHYPMESPQVIFLHPAPLHPHIYSNGHICLDILYDSWSPAMTVSSICISI 120

Query: 121 LSMLSSSTAKQRPDDNDRYVKNCRNGRSPKETRWWFHDDKV 162
           LSMLSSST KQRP DNDRYVKNC+NGRSPKETRWWFHDDKV
Sbjct: 121 LSMLSSSTEKQRPTDNDRYVKNCKNGRSPKETRWWFHDDKV 161

[Close]
BLAST of Cp4.1LG01g07060 vs. TAIR10
Match: AT5G42990.1 (AT5G42990.1 ubiquitin-conjugating enzyme 18)

HSP 1 Score: 308.5 bits (789), Expect = 2.4e-84
Identity = 143/161 (88.82%), Postives = 151/161 (93.79%), Query Frame = 1 

Query: 1   MTSSSDSARKALSKIACNRLQKELVEWQVNPPAGFKHKVTDNLQRWVIEVNGAPGTLYAN 60
           MTSSS  +RKALSKIACNRLQKEL EWQVNPP GFKH+VTDNLQ+WVIEV GAPGTLYAN
Sbjct: 1   MTSSSSPSRKALSKIACNRLQKELSEWQVNPPTGFKHRVTDNLQKWVIEVTGAPGTLYAN 60

Query: 61  ETYQLQVDFPEHYPMEAPQVIFLHPAPLHPHIYSNGHICLDILYDSWSPAMTVSSICISI 120
           ETY LQV+FP+HYPMEAPQVIF+ PAPLHPHIYSNGHICLDILYDSWSPAMTVSS+CISI
Sbjct: 61  ETYNLQVEFPQHYPMEAPQVIFVPPAPLHPHIYSNGHICLDILYDSWSPAMTVSSVCISI 120

Query: 121 LSMLSSSTAKQRPDDNDRYVKNCRNGRSPKETRWWFHDDKV 162
           LSMLSSS  KQRP DNDRYVKNC+NGRSPKETRWWFHDDKV
Sbjct: 121 LSMLSSSPEKQRPTDNDRYVKNCKNGRSPKETRWWFHDDKV 161

[Close]
BLAST of Cp4.1LG01g07060 vs. TAIR10
Match: AT1G45050.1 (AT1G45050.1 Ubiquitin-conjugating enzyme family protein)

HSP 1 Score: 305.1 bits (780), Expect = 2.6e-83
Identity = 140/161 (86.96%), Postives = 151/161 (93.79%), Query Frame = 1 

Query: 1   MTSSSDSARKALSKIACNRLQKELVEWQVNPPAGFKHKVTDNLQRWVIEVNGAPGTLYAN 60
           MTSSS  +RKALSKIACNRLQKEL EWQ+NPP GF+HKVTDNLQ+W I+V GAPGTLYAN
Sbjct: 1   MTSSSAPSRKALSKIACNRLQKELSEWQLNPPTGFRHKVTDNLQKWTIDVTGAPGTLYAN 60

Query: 61  ETYQLQVDFPEHYPMEAPQVIFLHPAPLHPHIYSNGHICLDILYDSWSPAMTVSSICISI 120
           ETYQLQV+FPEHYPMEAPQV+F+ PAP HPHIYSNGHICLDILYDSWSPAMTV+S+CISI
Sbjct: 61  ETYQLQVEFPEHYPMEAPQVVFVSPAPSHPHIYSNGHICLDILYDSWSPAMTVNSVCISI 120

Query: 121 LSMLSSSTAKQRPDDNDRYVKNCRNGRSPKETRWWFHDDKV 162
           LSMLSSS AKQRP DNDRYVKNC+NGRSPKETRWWFHDDKV
Sbjct: 121 LSMLSSSPAKQRPADNDRYVKNCKNGRSPKETRWWFHDDKV 161

[Close]
BLAST of Cp4.1LG01g07060 vs. TAIR10
Match: AT4G36410.1 (AT4G36410.1 ubiquitin-conjugating enzyme 17)

HSP 1 Score: 292.0 bits (746), Expect = 2.3e-79
Identity = 132/161 (81.99%), Postives = 149/161 (92.55%), Query Frame = 1 

Query: 1   MTSSSDSARKALSKIACNRLQKELVEWQVNPPAGFKHKVTDNLQRWVIEVNGAPGTLYAN 60
           MTSSS+S RK L+KIA NRLQKE +EWQ NPP+GFKH+V+DNLQRW+IEV+G PGTLYAN
Sbjct: 1   MTSSSESTRKGLTKIATNRLQKEFMEWQTNPPSGFKHRVSDNLQRWIIEVHGVPGTLYAN 60

Query: 61  ETYQLQVDFPEHYPMEAPQVIFLHPAPLHPHIYSNGHICLDILYDSWSPAMTVSSICISI 120
           ETYQLQV+FPEHYPMEAPQVIF HPAPLHPHIYSNGHICLD+LYDSWSPAM +SSIC+SI
Sbjct: 61  ETYQLQVEFPEHYPMEAPQVIFQHPAPLHPHIYSNGHICLDVLYDSWSPAMRLSSICLSI 120

Query: 121 LSMLSSSTAKQRPDDNDRYVKNCRNGRSPKETRWWFHDDKV 162
           LSMLSSS+ KQ+P DND Y+KNC++GRSPKETRW FHDDKV
Sbjct: 121 LSMLSSSSVKQKPKDNDHYLKNCKHGRSPKETRWRFHDDKV 161

[Close]
BLAST of Cp4.1LG01g07060 vs. TAIR10
Match: AT3G08690.1 (AT3G08690.1 ubiquitin-conjugating enzyme 11)

HSP 1 Score: 84.7 bits (208), Expect = 5.6e-17
Identity = 46/122 (37.70%), Postives = 69/122 (56.56%), Query Frame = 1 

Query: 15  IACNRLQKELVEWQVNPPAGFKH-KVTDNLQRWVIEVNGAPGTLYANETYQLQVDFPEHY 74
           +A  R+ KEL + Q +PP+      V +++  W   + G P + YA   + + + FP  Y
Sbjct: 1   MASKRILKELKDLQKDPPSNCSAGPVAEDMFHWQATIMGPPESPYAGGVFLVSIHFPPDY 60

Query: 75  PMEAPQVIFLHPAPLHPHIYSNGHICLDILYDSWSPAMTVSSICISILSMLSSSTAKQRP 134
           P + P+V F      HP+I SNG ICLDIL + WSPA+T+S + +SI S+L+       P
Sbjct: 61  PFKPPKVSFKTKV-YHPNINSNGSICLDILKEQWSPALTISKVLLSICSLLTD----PNP 117

Query: 135 DD 136
           DD
Sbjct: 121 DD 117

[Close]
BLAST of Cp4.1LG01g07060 vs. NCBI nr
Match: gi|659102410|ref|XP_008452114.1| (PREDICTED: probable ubiquitin-conjugating enzyme E2 16 [Cucumis melo])

HSP 1 Score: 337.8 bits (865), Expect = 1.0e-89
Identity = 160/161 (99.38%), Postives = 160/161 (99.38%), Query Frame = 1 

Query: 1   MTSSSDSARKALSKIACNRLQKELVEWQVNPPAGFKHKVTDNLQRWVIEVNGAPGTLYAN 60
           MTSSSDSA KALSKIACNRLQKELVEWQVNPPAGFKHKVTDNLQRWVIEVNGAPGTLYAN
Sbjct: 1   MTSSSDSALKALSKIACNRLQKELVEWQVNPPAGFKHKVTDNLQRWVIEVNGAPGTLYAN 60

Query: 61  ETYQLQVDFPEHYPMEAPQVIFLHPAPLHPHIYSNGHICLDILYDSWSPAMTVSSICISI 120
           ETYQLQVDFPEHYPMEAPQVIFLHPAPLHPHIYSNGHICLDILYDSWSPAMTVSSICISI
Sbjct: 61  ETYQLQVDFPEHYPMEAPQVIFLHPAPLHPHIYSNGHICLDILYDSWSPAMTVSSICISI 120

Query: 121 LSMLSSSTAKQRPDDNDRYVKNCRNGRSPKETRWWFHDDKV 162
           LSMLSSSTAKQRPDDNDRYVKNCRNGRSPKETRWWFHDDKV
Sbjct: 121 LSMLSSSTAKQRPDDNDRYVKNCRNGRSPKETRWWFHDDKV 161

[Close]
BLAST of Cp4.1LG01g07060 vs. NCBI nr
Match: gi|590703187|ref|XP_007046806.1| (Ubiquitin-conjugating enzyme 16 [Theobroma cacao])

HSP 1 Score: 333.2 bits (853), Expect = 2.6e-88
Identity = 157/161 (97.52%), Postives = 159/161 (98.76%), Query Frame = 1 

Query: 1   MTSSSDSARKALSKIACNRLQKELVEWQVNPPAGFKHKVTDNLQRWVIEVNGAPGTLYAN 60
           MTSSS SARKALSKIACNRLQKELVEWQVNPP+GFKHKVTDNLQRWVIEVNGAPGTLYAN
Sbjct: 1   MTSSSASARKALSKIACNRLQKELVEWQVNPPSGFKHKVTDNLQRWVIEVNGAPGTLYAN 60

Query: 61  ETYQLQVDFPEHYPMEAPQVIFLHPAPLHPHIYSNGHICLDILYDSWSPAMTVSSICISI 120
           ETYQLQVDFPEHYPMEAPQVIFLHPAPLHPHIYSNGHICLDILYDSWSPAMTVSSICISI
Sbjct: 61  ETYQLQVDFPEHYPMEAPQVIFLHPAPLHPHIYSNGHICLDILYDSWSPAMTVSSICISI 120

Query: 121 LSMLSSSTAKQRPDDNDRYVKNCRNGRSPKETRWWFHDDKV 162
           LSMLSSST KQRP+DNDRYVKNCRNGRSPKETRWWFHDDKV
Sbjct: 121 LSMLSSSTVKQRPEDNDRYVKNCRNGRSPKETRWWFHDDKV 161

[Close]
BLAST of Cp4.1LG01g07060 vs. NCBI nr
Match: gi|802600299|ref|XP_012072873.1| (PREDICTED: probable ubiquitin-conjugating enzyme E2 16 isoform X2 [Jatropha curcas])

HSP 1 Score: 331.3 bits (848), Expect = 9.7e-88
Identity = 155/161 (96.27%), Postives = 158/161 (98.14%), Query Frame = 1 

Query: 1   MTSSSDSARKALSKIACNRLQKELVEWQVNPPAGFKHKVTDNLQRWVIEVNGAPGTLYAN 60
           MTSSS +ARKALSKIACNRLQKELVEWQVNPP GFKHKVTDNLQRWVIEVNGAPGTLYAN
Sbjct: 1   MTSSSANARKALSKIACNRLQKELVEWQVNPPTGFKHKVTDNLQRWVIEVNGAPGTLYAN 60

Query: 61  ETYQLQVDFPEHYPMEAPQVIFLHPAPLHPHIYSNGHICLDILYDSWSPAMTVSSICISI 120
           ETYQLQVDFPEHYPMEAPQVIFLHPAPLHPHIYSNGHICLDILYDSWSPAMTVSS+CISI
Sbjct: 61  ETYQLQVDFPEHYPMEAPQVIFLHPAPLHPHIYSNGHICLDILYDSWSPAMTVSSVCISI 120

Query: 121 LSMLSSSTAKQRPDDNDRYVKNCRNGRSPKETRWWFHDDKV 162
           LSMLSSST KQRP+DNDRYVKNCRNGRSPKETRWWFHDDKV
Sbjct: 121 LSMLSSSTVKQRPEDNDRYVKNCRNGRSPKETRWWFHDDKV 161

[Close]
BLAST of Cp4.1LG01g07060 vs. NCBI nr
Match: gi|1009144626|ref|XP_015889904.1| (PREDICTED: probable ubiquitin-conjugating enzyme E2 16 [Ziziphus jujuba])

HSP 1 Score: 330.5 bits (846), Expect = 1.7e-87
Identity = 155/161 (96.27%), Postives = 158/161 (98.14%), Query Frame = 1 

Query: 1   MTSSSDSARKALSKIACNRLQKELVEWQVNPPAGFKHKVTDNLQRWVIEVNGAPGTLYAN 60
           MTSSS ++RKALSKIACNRLQKELVEWQVNPP GFKHKVTDNLQRWVIEVNGAPGTLYAN
Sbjct: 1   MTSSSATSRKALSKIACNRLQKELVEWQVNPPTGFKHKVTDNLQRWVIEVNGAPGTLYAN 60

Query: 61  ETYQLQVDFPEHYPMEAPQVIFLHPAPLHPHIYSNGHICLDILYDSWSPAMTVSSICISI 120
           ETYQLQVDFPEHYPMEAPQVIFLHPAPLHPHIYSNGHICLDILYDSWSPAMTVSSICISI
Sbjct: 61  ETYQLQVDFPEHYPMEAPQVIFLHPAPLHPHIYSNGHICLDILYDSWSPAMTVSSICISI 120

Query: 121 LSMLSSSTAKQRPDDNDRYVKNCRNGRSPKETRWWFHDDKV 162
           LSMLSSST KQRP+DNDRYVKNCRNGRSPKETRWWFHDDKV
Sbjct: 121 LSMLSSSTVKQRPEDNDRYVKNCRNGRSPKETRWWFHDDKV 161

[Close]
BLAST of Cp4.1LG01g07060 vs. NCBI nr
Match: gi|1009168305|ref|XP_015902587.1| (PREDICTED: probable ubiquitin-conjugating enzyme E2 16 [Ziziphus jujuba])

HSP 1 Score: 328.9 bits (842), Expect = 4.8e-87
Identity = 155/161 (96.27%), Postives = 157/161 (97.52%), Query Frame = 1 

Query: 1   MTSSSDSARKALSKIACNRLQKELVEWQVNPPAGFKHKVTDNLQRWVIEVNGAPGTLYAN 60
           MTS+S S+RKALSKIACNRLQKELVEWQVNPP GFKHKVTDNLQRWVIEVNGAPGTLYAN
Sbjct: 1   MTSTSASSRKALSKIACNRLQKELVEWQVNPPTGFKHKVTDNLQRWVIEVNGAPGTLYAN 60

Query: 61  ETYQLQVDFPEHYPMEAPQVIFLHPAPLHPHIYSNGHICLDILYDSWSPAMTVSSICISI 120
           ETYQLQVDFPEHYPMEAPQVIFLHPAPLHPHIYSNGHICLDILYDSWSPAMTVSSICISI
Sbjct: 61  ETYQLQVDFPEHYPMEAPQVIFLHPAPLHPHIYSNGHICLDILYDSWSPAMTVSSICISI 120

Query: 121 LSMLSSSTAKQRPDDNDRYVKNCRNGRSPKETRWWFHDDKV 162
           LSMLSSST KQRP DNDRYVKNCRNGRSPKETRWWFHDDKV
Sbjct: 121 LSMLSSSTVKQRPADNDRYVKNCRNGRSPKETRWWFHDDKV 161

The following BLAST results are available for this feature:
BLAST of Cp4.1LG01g07060 vs. Swiss-Prot
Match NameE-valueIdentityDescription
UBC16_ARATH6.5e-8490.06Probable ubiquitin-conjugating enzyme E2 16 OS=Arabidopsis thaliana GN=UBC16 PE=... [more]
UBC18_ARATH4.2e-8388.82Probable ubiquitin-conjugating enzyme E2 18 OS=Arabidopsis thaliana GN=UBC18 PE=... [more]
UBC15_ARATH4.7e-8286.96Ubiquitin-conjugating enzyme 15 OS=Arabidopsis thaliana GN=UBC15 PE=2 SV=2[more]
UBC17_ARATH4.1e-7881.99Probable ubiquitin-conjugating enzyme E2 17 OS=Arabidopsis thaliana GN=UBC17 PE=... [more]
UBE2W_DICDI1.2e-4256.64Probable ubiquitin-conjugating enzyme E2 W OS=Dictyostelium discoideum GN=ube2w ... [more]
BLAST of Cp4.1LG01g07060 vs. TrEMBL
Match NameE-valueIdentityDescription
A0A0A0KUH0_CUCSA7.2e-9099.38Uncharacterized protein OS=Cucumis sativus GN=Csa_4G045000 PE=3 SV=1[more]
A0A061DLV4_THECC1.8e-8897.52Ubiquitin-conjugating enzyme 16 OS=Theobroma cacao GN=TCM_000290 PE=3 SV=1[more]
A0A067KYV1_JATCU6.8e-8896.27Uncharacterized protein OS=Jatropha curcas GN=JCGZ_08281 PE=3 SV=1[more]
W9SBS2_9ROSA4.4e-8796.27Putative ubiquitin-conjugating enzyme E2 16 OS=Morus notabilis GN=L484_013245 PE... [more]
B9MXK5_POPTR1.7e-8695.03UBIQUITIN-CONJUGATING ENZYME 17 family protein OS=Populus trichocarpa GN=POPTR_0... [more]
BLAST of Cp4.1LG01g07060 vs. TAIR10
Match NameE-valueIdentityDescription
AT1G75440.13.7e-8590.06 ubiquitin-conjugating enzyme 16[more]
AT5G42990.12.4e-8488.82 ubiquitin-conjugating enzyme 18[more]
AT1G45050.12.6e-8386.96 Ubiquitin-conjugating enzyme family protein[more]
AT4G36410.12.3e-7981.99 ubiquitin-conjugating enzyme 17[more]
AT3G08690.15.6e-1737.70 ubiquitin-conjugating enzyme 11[more]
BLAST of Cp4.1LG01g07060 vs. NCBI nr
Match NameE-valueIdentityDescription
gi|659102410|ref|XP_008452114.1|1.0e-8999.38PREDICTED: probable ubiquitin-conjugating enzyme E2 16 [Cucumis melo][more]
gi|590703187|ref|XP_007046806.1|2.6e-8897.52Ubiquitin-conjugating enzyme 16 [Theobroma cacao][more]
gi|802600299|ref|XP_012072873.1|9.7e-8896.27PREDICTED: probable ubiquitin-conjugating enzyme E2 16 isoform X2 [Jatropha curc... [more]
gi|1009144626|ref|XP_015889904.1|1.7e-8796.27PREDICTED: probable ubiquitin-conjugating enzyme E2 16 [Ziziphus jujuba][more]
gi|1009168305|ref|XP_015902587.1|4.8e-8796.27PREDICTED: probable ubiquitin-conjugating enzyme E2 16 [Ziziphus jujuba][more]
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: INTERPRO
TermDefinition
IPR023313UBQ-conjugating_AS
IPR016135UBQ-conjugating_enzyme/RWD
IPR000608UBQ-conjugat_E2
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0008152 metabolic process
biological_process GO:0008150 biological_process
cellular_component GO:0005575 cellular_component
molecular_function GO:0016874 ligase activity
molecular_function GO:0005524 ATP binding
molecular_function GO:0003824 catalytic activity
molecular_function GO:0003674 molecular_function
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Cp4.1LG01g07060.1Cp4.1LG01g07060.1mRNA


InterPro
Analysis Name: InterPro Annotations of Cucurbita pepo
Date Performed: 2017-12-02
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR000608Ubiquitin-conjugating enzyme E2PFAMPF00179UQ_concoord: 19..154
score: 2.4
IPR000608Ubiquitin-conjugating enzyme E2PROFILEPS50127UBIQUITIN_CONJUGAT_2coord: 18..137
score: 27
IPR016135Ubiquitin-conjugating enzyme/RWD-likeGENE3DG3DSA:3.10.110.10coord: 5..140
score: 2.3
IPR016135Ubiquitin-conjugating enzyme/RWD-likeunknownSSF54495UBC-likecoord: 8..142
score: 1.17
IPR023313Ubiquitin-conjugating enzyme, active sitePROSITEPS00183UBIQUITIN_CONJUGAT_1coord: 88..103
scor
NoneNo IPR availablePANTHERPTHR24067UBIQUITIN-CONJUGATING ENZYME E2coord: 1..161
score: 3.6E
NoneNo IPR availablePANTHERPTHR24067:SF155UBIQUITIN-CONJUGATING ENZYME E2 16-RELATEDcoord: 1..161
score: 3.6E
NoneNo IPR availableSMARTSM00212ubc_7coord: 18..161
score: 3.8

Synteny
The following gene(s) are orthologous to this gene:
GeneOrthologueOrganismBlock
Cp4.1LG01g07060Cucsa.201080Cucumber (Gy14) v1cgycpeB0569
Cp4.1LG01g07060CmaCh16G006350Cucurbita maxima (Rimu)cmacpeB354
Cp4.1LG01g07060CmoCh16G006930Cucurbita moschata (Rifu)cmocpeB316
Cp4.1LG01g07060Cla014564Watermelon (97103) v1cpewmB420
Cp4.1LG01g07060Csa4G045000Cucumber (Chinese Long) v2cpecuB400
Cp4.1LG01g07060MELO3C016406Melon (DHL92) v3.5.1cpemeB424
Cp4.1LG01g07060ClCG07G008750Watermelon (Charleston Gray)cpewcgB412
Cp4.1LG01g07060CSPI04G05270Wild cucumber (PI 183967)cpecpiB397
Cp4.1LG01g07060Lsi07G002350Bottle gourd (USVL1VR-Ls)cpelsiB373
Cp4.1LG01g07060MELO3C016407.2Melon (DHL92) v3.6.1cpemedB496
Cp4.1LG01g07060CsaV3_4G005420Cucumber (Chinese Long) v3cpecucB0497
Cp4.1LG01g07060Bhi01G001880Wax gourdcpewgoB0522
Cp4.1LG01g07060CsGy4G005170Cucumber (Gy14) v2cgybcpeB502
Cp4.1LG01g07060Carg05755Silver-seed gourdcarcpeB1418
Cp4.1LG01g07060Carg14166Silver-seed gourdcarcpeB1303
The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:
GeneOrganismBlock
Cp4.1LG01g07060Cucurbita pepo (Zucchini)cpecpeB073
Cp4.1LG01g07060Cucurbita pepo (Zucchini)cpecpeB233
Cp4.1LG01g07060Cucurbita pepo (Zucchini)cpecpeB237
Cp4.1LG01g07060Cucurbita pepo (Zucchini)cpecpeB385
Cp4.1LG01g07060Cucurbita maxima (Rimu)cmacpeB350
Cp4.1LG01g07060Cucurbita maxima (Rimu)cmacpeB720
Cp4.1LG01g07060Cucurbita maxima (Rimu)cmacpeB731
Cp4.1LG01g07060Cucurbita maxima (Rimu)cmacpeB876
Cp4.1LG01g07060Cucurbita moschata (Rifu)cmocpeB673
Cp4.1LG01g07060Cucurbita moschata (Rifu)cmocpeB684
Cp4.1LG01g07060Cucurbita moschata (Rifu)cmocpeB813
Cp4.1LG01g07060Cucumber (Gy14) v2cgybcpeB807
Cp4.1LG01g07060Melon (DHL92) v3.6.1cpemedB510
Cp4.1LG01g07060Silver-seed gourdcarcpeB1302
Cp4.1LG01g07060Cucumber (Chinese Long) v3cpecucB0580
Cp4.1LG01g07060Wax gourdcpewgoB0510