Cp4.1LG01g07060.1 (mRNA) Cucurbita pepo (Zucchini) | Cucurbit Genomics Database (CuGenDB)

Overview


Name	Cp4.1LG01g07060.1
Type	mRNA
Organism	Cucurbita pepo (Cucurbita pepo (Zucchini))
Description	Ubiquitin-conjugating enzyme E2
Location	Cp4.1LG01 : 3968246 .. 3971900 (+)
Sequence length	1261

Genome Viewer

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGTATCCCCGTCAATCAAGCTTGGAATATGCCAATCCCAAATTGGAAGTGCCCACAGAATTTTGTAATGTTAAATTATTAAATTAAATAAATTTCATATTTATTTTACACTTTTAATTTAAATATTAAACTAAATTAAAATGATTTTTTTATTAATATTTTTTGAACACATAAACATAGTATTTCAATATTGCTGGATAAATGAAGTCCAACGTGTTCGTTGACAACAATCTGTTTCTTGAAGTATGTCGAATAAATATCTCTTACGTGTAGAAATTGAGAATTTGAGAAGATGGAGGACCAAAATGAAAATATAGGATTTTTTTTTTTTTTTTTTTTTTTCTAATTTAGAAAGGTGGTAATTTTAAAAGGAAAAAAGGAAGATATTAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAGGGAAGTAAATGGGAATGGAATAGGGTGTAGAGGAAGAGTGGGGAGTGGCGTTATAAGGCGTGGCCGGTCCACTTTGTCCCTTTCGTCAACATCATCGTCACATTTCGCATTAACTCTTTTCCTCCCCTTCTCTCTGCCATTGCGGAGCCAAACCCAAGCATGACCAGCTCCTCCGACTCCGCTCGTAAGGTTGTCCCTTTTCTTCTTCCTCATAATCATCTTTATCCTCATCGCCATCGCCATCGCCGTGTTTCATTCATCAATTTACTCTCATCTGATTCTGCTCTCCTAACTCTTCCTTTCGTATCTGATTTGATTCCTTTTCCAGGCTTTGAGTAAGATTGCTTGCAATCGGCTTCAGAAGGAACTGGTCGAGTGGCAGGTTAACCCTCCCGCTGGTTTTAAACACAAGGTTACCGATAATCTCCAGAGGTATTGCTTCTTCCCCTTTTCTCGTAGGGTTTTTTTTAATTCGTATTTTCTGTTTATTTGCCTTCTGCGTCATTGTTAGCGCTCTGGAAAGTAAGAAAAAGGCTGGAATTTGATGTAATAGCGTCGAATTGGTGTTGTTGGGTGCCTTGGGGTGGGGCTTAGTTTAGGTTTGATTGTGTCGTGCTCTCCCTATTATCGACAGTGGAGGTTCTTAATTTTTCCTTTGAAATCGAAGTGAGGTTTTCTTGTTTCTGTTCTTTGTCTGTAGTGTGTTCTGAAAGGAAATTTACTATCTGCTTTTAGTAGGAATTTGACGTTCATTTTTGGATTTATTTTATTTTATTTTATTTTATTTTGTTGGAAGATGGGTGATTGAAGTCAACGGAGCTCCGGGAACTCTCTATGCAAATGAAACCTACCAGCTTCAGGTGGACTTCCCTGAGCATTACCCAATGGAAGCCCCACAGGTGTATAAACATAATCATTGAATTCTGAGATCATTTCTTCCATAATCCTGTGTAGTGTCTAAATTTATTGATTGTTGTGTGTTTGATTTTGTATACCGGTTTCATAACAGGTTATATTTCTGCATCCAGCCCCTCTTCATCCTCATATCTATAGCAATGGTCACATTTGTCTAGGTTGGTATATGGATAATTTTCTATTGCTTGTTCTTGTTGGATATTCTTTTCTTTGTGTGTATAGATTTCTTTGTGGTTATATCGTTTGCTTCACCATTTCACTCTATTTATGAGATTGCAATTAGGAAGGAATATAAAGTTTATATTCTATTGCTTTCTTCACTCTTTTGTTTATGTTTAGAATTTTTTTTCCATCTACCCTGTTTGAGCCTAATGCGGTCTATAAGGAGTTTTGTTTTTAGTATTTGTGTCAGGGGTCACACTTCAGATGGATGTTCAATAATAGTAATGGTGTTTAATTGAATTCGACCCAAGAAGATATCTCAATTGGGGACGTTAATAGATCTTTTACCATACAGTGGCACGTTGCATGTAAGCTTATCAGTGGTTCATCATGGAGAACCTGAATGATTTAATGTTACAGAAAGGTTTTGATATATATCCTGTCCTATTAGGACAACGTGTTGCTTACCTCTATTATGTTTAAAACTTTTCAATTACACAAAATAGAAGTATAAACTAGTCTTGCAATGAAAAATAAAAGAAAAAGAAGAGGAAGTACTGTTTGATATTGGATTCCGTTCTTTTTGTTAATAGCTAGTTTGTATGGATGAAAAGATCCTCTATGCTGAAAAGTTATTGCAGGATGAGTGTTTATCATGGTATTTACTAGGTGTTCATTGGTCGGGTTTGTTTTGAAATCTTTCAACCATTTGGTTATATGTCTATATATGTAATGAATAAGAACAGAACCATACTGCTCAACACTTAAATCCAAAACAATACCAATTCATCCATCAATATGTTTCTTTGTATCATTCATAACCTCTTTCAATTGTTTGGGAAACTTTTGTTTTTTTCCCCCCCGAATGTTATGTTTGCTGATTGAAATGAAATATAAATACCATAAAGTTCATCAAATCTGCAAAATGAATAAAACTAATTTCTATTACATGTTAGATTGTAATTGTTTTATAACCTAAGTCTTTAAAACTTGACTTTAGATTTTGCAGGGCATCATTAATCATGTAATATTTTAAATTATTTAGGTGTAAATATTCGTTCATTTTAGCAATCTAAGTTTTATTAATCTGTTTCGTTTGGTTTGCTTTAGACAGAAATTTGTCAAGCTGAACCAAACTATCATTGCTGGTTTTGTTTGGTCTGAACAAAAGGAAAGGAATCTCAAACCAAGCCAATTTAGTTTGGATCATTGGTTTGGTCTTGAATACCTCTATCATTTGCAATGGATGTAGTTTGAAGGTGAAGTTGGAAATATGCTTTCTGCAACTTGCTAGTTGCTCAGATGCACATTACCTGCGAGATTGAGATGATGTGTTTTCTAATAATTTAATATGTTGGTGTTAAAGTTTCGNCTAATAATTTAATATGTTGGTGTTAAAGTTTCGTCTTGCCTTTTCCTCTCGTACATGTTTCTAACTATTGATACTGTTTGTTGCTCGTGCTTGTTTGAGTTTTGAATTCTATCCTAGTCGTGTATATCTATTGTATGGCTTTATTTATGGTCTATTATTGGCTTTGTCTGAGTGCTTTAGTTATCACCTCCATACCAACACTGACCATTGTTATTTCCCTTCACTCTGAAACCGTGTAGATATTTTATATGATTCATGGTCGCCTGCAATGACTGTAAGTTCTATCTGTATCAGCATTCTCTCCATGTTGTCGAGCTCGACAGCAAAGGTCTGTTACACTTCATGCCACTTCATGCCACTTTGATCCTATTGTATAATTAATATGTTTTTCATGGAGGGTAACGAAATTGTTAAGATATAACTTGTAAGGACGTGTTGTGTGTACTAACTTCAACCAGAATCCTTCTCTGATAGTCTAATGTTTTCTATTGCAGCAACGCCCTGACGATAACGACCGTTATGTAAAGAATTGTAGGAATGGAAGATCCCCAAAAGAGACGAGGTGGTGGTTCCATGACGATAAGGTGTAACAACGTAAGATCTTCCATTGTTATGCCTGTGGCTTCCCTTGTTTGTAAGGTGAAAGAAGTAGAAAGTGATTATGGAAAAAGAAAACCAAGTAAAGTGGTAAGGCCTGGCATTTGTAAAGGAAGATCAATTTATGTTTCTTACTAATGTCTAAAGAACAACTTCTCTTGTCCTTTCTTGGGGGTGGGTTATCCT

mRNA sequence

ATGTATCCCCGTCAATCAAGCTTGGAATATGCCAATCCCAAATTGGAAGTGCCCACAGAATTTTGTAATGTTAAATTATTAAATTAAATAAATTTCATATTTATTTTACACTTTTAATTTAAATATTAAACTAAATTAAAATGATTTTTTTATTAATATTTTTTGAACACATAAACATAGTATTTCAATATTGCTGGATAAATGAAGTCCAACGTGTTCGTTGACAACAATCTGTTTCTTGAAGTATGTCGAATAAATATCTCTTACGTGTAGAAATTGAGAATTTGAGAAGATGGAGGACCAAAATGAAAATATAGGATTTTTTTTTTTTTTTTTTTTTTTCTAATTTAGAAAGGTGGTAATTTTAAAAGGAAAAAAGGAAGATATTAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAGGGAAGTAAATGGGAATGGAATAGGGTGTAGAGGAAGAGTGGGGAGTGGCGTTATAAGGCGTGGCCGGTCCACTTTGTCCCTTTCGTCAACATCATCGTCACATTTCGCATTAACTCTTTTCCTCCCCTTCTCTCTGCCATTGCGGAGCCAAACCCAAGCATGACCAGCTCCTCCGACTCCGCTCGTAAGGCTTTGAGTAAGATTGCTTGCAATCGGCTTCAGAAGGAACTGGTCGAGTGGCAGGTTAACCCTCCCGCTGGTTTTAAACACAAGGTTACCGATAATCTCCAGAGATGGGTGATTGAAGTCAACGGAGCTCCGGGAACTCTCTATGCAAATGAAACCTACCAGCTTCAGGTGGACTTCCCTGAGCATTACCCAATGGAAGCCCCACAGGTTATATTTCTGCATCCAGCCCCTCTTCATCCTCATATCTATAGCAATGGTCACATTTGTCTAGATATTTTATATGATTCATGGTCGCCTGCAATGACTGTAAGTTCTATCTGTATCAGCATTCTCTCCATGTTGTCGAGCTCGACAGCAAAGCAACGCCCTGACGATAACGACCGTTATGTAAAGAATTGTAGGAATGGAAGATCCCCAAAAGAGACGAGGTGGTGGTTCCATGACGATAAGGTGTAACAACGTAAGATCTTCCATTGTTATGCCTGTGGCTTCCCTTGTTTGTAAGGTGAAAGAAGTAGAAAGTGATTATGGAAAAAGAAAACCAAGTAAAGTGGTAAGGCCTGGCATTTGTAAAGGAAGATCAATTTATGTTTCTTACTAATGTCTAAAGAACAACTTCTCTTGTCCTTTCTTGGGGGTGGGTTATCCT

Coding sequence (CDS)

ATGACCAGCTCCTCCGACTCCGCTCGTAAGGCTTTGAGTAAGATTGCTTGCAATCGGCTTCAGAAGGAACTGGTCGAGTGGCAGGTTAACCCTCCCGCTGGTTTTAAACACAAGGTTACCGATAATCTCCAGAGATGGGTGATTGAAGTCAACGGAGCTCCGGGAACTCTCTATGCAAATGAAACCTACCAGCTTCAGGTGGACTTCCCTGAGCATTACCCAATGGAAGCCCCACAGGTTATATTTCTGCATCCAGCCCCTCTTCATCCTCATATCTATAGCAATGGTCACATTTGTCTAGATATTTTATATGATTCATGGTCGCCTGCAATGACTGTAAGTTCTATCTGTATCAGCATTCTCTCCATGTTGTCGAGCTCGACAGCAAAGCAACGCCCTGACGATAACGACCGTTATGTAAAGAATTGTAGGAATGGAAGATCCCCAAAAGAGACGAGGTGGTGGTTCCATGACGATAAGGTGTAA

Protein sequence

MTSSSDSARKALSKIACNRLQKELVEWQVNPPAGFKHKVTDNLQRWVIEVNGAPGTLYANETYQLQVDFPEHYPMEAPQVIFLHPAPLHPHIYSNGHICLDILYDSWSPAMTVSSICISILSMLSSSTAKQRPDDNDRYVKNCRNGRSPKETRWWFHDDKV

Homology

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BLAST of Cp4.1LG01g07060.1 vs. Swiss-Prot
Match: UBC16_ARATH (Probable ubiquitin-conjugating enzyme E2 16 OS=Arabidopsis thaliana GN=UBC16 PE=2 SV=1)

HSP 1 Score: 311.2 bits (796), Expect = 6.5e-84
Identity = 145/161 (90.06%), Postives = 152/161 (94.41%), Query Frame = 1


Query: 1   MTSSSDSARKALSKIACNRLQKELVEWQVNPPAGFKHKVTDNLQRWVIEVNGAPGTLYAN 60
           M+SS   +RK LSKIA NRLQKELVEWQ+NPP GFKHKVTDNLQRW+IEV GAPGTLYAN
Sbjct: 1   MSSSGAPSRKTLSKIATNRLQKELVEWQMNPPTGFKHKVTDNLQRWIIEVIGAPGTLYAN 60

Query: 61  ETYQLQVDFPEHYPMEAPQVIFLHPAPLHPHIYSNGHICLDILYDSWSPAMTVSSICISI 120
           +TYQLQVDFPEHYPME+PQVIFLHPAPLHPHIYSNGHICLDILYDSWSPAMTVSSICISI
Sbjct: 61  DTYQLQVDFPEHYPMESPQVIFLHPAPLHPHIYSNGHICLDILYDSWSPAMTVSSICISI 120

Query: 121 LSMLSSSTAKQRPDDNDRYVKNCRNGRSPKETRWWFHDDKV 162
           LSMLSSST KQRP DNDRYVKNC+NGRSPKETRWWFHDDKV
Sbjct: 121 LSMLSSSTEKQRPTDNDRYVKNCKNGRSPKETRWWFHDDKV 161

[Close]

BLAST of Cp4.1LG01g07060.1 vs. Swiss-Prot
Match: UBC18_ARATH (Probable ubiquitin-conjugating enzyme E2 18 OS=Arabidopsis thaliana GN=UBC18 PE=2 SV=1)

HSP 1 Score: 308.5 bits (789), Expect = 4.2e-83
Identity = 143/161 (88.82%), Postives = 151/161 (93.79%), Query Frame = 1


Query: 1   MTSSSDSARKALSKIACNRLQKELVEWQVNPPAGFKHKVTDNLQRWVIEVNGAPGTLYAN 60
           MTSSS  +RKALSKIACNRLQKEL EWQVNPP GFKH+VTDNLQ+WVIEV GAPGTLYAN
Sbjct: 1   MTSSSSPSRKALSKIACNRLQKELSEWQVNPPTGFKHRVTDNLQKWVIEVTGAPGTLYAN 60

Query: 61  ETYQLQVDFPEHYPMEAPQVIFLHPAPLHPHIYSNGHICLDILYDSWSPAMTVSSICISI 120
           ETY LQV+FP+HYPMEAPQVIF+ PAPLHPHIYSNGHICLDILYDSWSPAMTVSS+CISI
Sbjct: 61  ETYNLQVEFPQHYPMEAPQVIFVPPAPLHPHIYSNGHICLDILYDSWSPAMTVSSVCISI 120

Query: 121 LSMLSSSTAKQRPDDNDRYVKNCRNGRSPKETRWWFHDDKV 162
           LSMLSSS  KQRP DNDRYVKNC+NGRSPKETRWWFHDDKV
Sbjct: 121 LSMLSSSPEKQRPTDNDRYVKNCKNGRSPKETRWWFHDDKV 161

[Close]

BLAST of Cp4.1LG01g07060.1 vs. Swiss-Prot
Match: UBC15_ARATH (Ubiquitin-conjugating enzyme 15 OS=Arabidopsis thaliana GN=UBC15 PE=2 SV=2)

HSP 1 Score: 305.1 bits (780), Expect = 4.7e-82
Identity = 140/161 (86.96%), Postives = 151/161 (93.79%), Query Frame = 1


Query: 1   MTSSSDSARKALSKIACNRLQKELVEWQVNPPAGFKHKVTDNLQRWVIEVNGAPGTLYAN 60
           MTSSS  +RKALSKIACNRLQKEL EWQ+NPP GF+HKVTDNLQ+W I+V GAPGTLYAN
Sbjct: 1   MTSSSAPSRKALSKIACNRLQKELSEWQLNPPTGFRHKVTDNLQKWTIDVTGAPGTLYAN 60

Query: 61  ETYQLQVDFPEHYPMEAPQVIFLHPAPLHPHIYSNGHICLDILYDSWSPAMTVSSICISI 120
           ETYQLQV+FPEHYPMEAPQV+F+ PAP HPHIYSNGHICLDILYDSWSPAMTV+S+CISI
Sbjct: 61  ETYQLQVEFPEHYPMEAPQVVFVSPAPSHPHIYSNGHICLDILYDSWSPAMTVNSVCISI 120

Query: 121 LSMLSSSTAKQRPDDNDRYVKNCRNGRSPKETRWWFHDDKV 162
           LSMLSSS AKQRP DNDRYVKNC+NGRSPKETRWWFHDDKV
Sbjct: 121 LSMLSSSPAKQRPADNDRYVKNCKNGRSPKETRWWFHDDKV 161

[Close]

BLAST of Cp4.1LG01g07060.1 vs. Swiss-Prot
Match: UBC17_ARATH (Probable ubiquitin-conjugating enzyme E2 17 OS=Arabidopsis thaliana GN=UBC17 PE=2 SV=1)

HSP 1 Score: 292.0 bits (746), Expect = 4.1e-78
Identity = 132/161 (81.99%), Postives = 149/161 (92.55%), Query Frame = 1


Query: 1   MTSSSDSARKALSKIACNRLQKELVEWQVNPPAGFKHKVTDNLQRWVIEVNGAPGTLYAN 60
           MTSSS+S RK L+KIA NRLQKE +EWQ NPP+GFKH+V+DNLQRW+IEV+G PGTLYAN
Sbjct: 1   MTSSSESTRKGLTKIATNRLQKEFMEWQTNPPSGFKHRVSDNLQRWIIEVHGVPGTLYAN 60

Query: 61  ETYQLQVDFPEHYPMEAPQVIFLHPAPLHPHIYSNGHICLDILYDSWSPAMTVSSICISI 120
           ETYQLQV+FPEHYPMEAPQVIF HPAPLHPHIYSNGHICLD+LYDSWSPAM +SSIC+SI
Sbjct: 61  ETYQLQVEFPEHYPMEAPQVIFQHPAPLHPHIYSNGHICLDVLYDSWSPAMRLSSICLSI 120

Query: 121 LSMLSSSTAKQRPDDNDRYVKNCRNGRSPKETRWWFHDDKV 162
           LSMLSSS+ KQ+P DND Y+KNC++GRSPKETRW FHDDKV
Sbjct: 121 LSMLSSSSVKQKPKDNDHYLKNCKHGRSPKETRWRFHDDKV 161

[Close]

BLAST of Cp4.1LG01g07060.1 vs. Swiss-Prot
Match: UBE2W_DICDI (Probable ubiquitin-conjugating enzyme E2 W OS=Dictyostelium discoideum GN=ube2w PE=3 SV=1)

HSP 1 Score: 174.1 bits (440), Expect = 1.2e-42
Identity = 81/143 (56.64%), Postives = 103/143 (72.03%), Query Frame = 1


Query: 19  RLQKELVEWQVNPPAGFKHKVTDNLQRWVIEVNGAPGTLYANETYQLQVDFPEHYPMEAP 78
           RLQKEL++ + NPP        DNL +WVI V+G  G++Y  E ++LQ  F   YP+++P
Sbjct: 8   RLQKELLDLKTNPPPCISITEGDNLDKWVIAVDGTEGSIYQGEHFKLQFKFSSGYPLDSP 67

Query: 79  QVIFLHPAPLHPHIYSNGHICLDILYDSWSPAMTVSSICISILSMLSSSTAKQRPDDNDR 138
           +VIF+   P+HPHIYSNGHICL ILYD+WSPA+TVSS+C+SILSMLS  T K RP D+ +
Sbjct: 68  EVIFIGTPPIHPHIYSNGHICLSILYDNWSPALTVSSVCLSILSMLSGCTEKIRPTDDSK 127

Query: 139 YVKNCRNGRSPKETRWWFHDDKV 162
           YV    N +SPKE RW FHDD V
Sbjct: 128 YVSRVLN-KSPKEVRWMFHDDTV 149

[Close]

BLAST of Cp4.1LG01g07060.1 vs. TrEMBL
Match: A0A0A0KUH0_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_4G045000 PE=3 SV=1)

HSP 1 Score: 337.8 bits (865), Expect = 7.2e-90
Identity = 160/161 (99.38%), Postives = 160/161 (99.38%), Query Frame = 1


Query: 1   MTSSSDSARKALSKIACNRLQKELVEWQVNPPAGFKHKVTDNLQRWVIEVNGAPGTLYAN 60
           MTSSSDSA KALSKIACNRLQKELVEWQVNPPAGFKHKVTDNLQRWVIEVNGAPGTLYAN
Sbjct: 1   MTSSSDSALKALSKIACNRLQKELVEWQVNPPAGFKHKVTDNLQRWVIEVNGAPGTLYAN 60

Query: 61  ETYQLQVDFPEHYPMEAPQVIFLHPAPLHPHIYSNGHICLDILYDSWSPAMTVSSICISI 120
           ETYQLQVDFPEHYPMEAPQVIFLHPAPLHPHIYSNGHICLDILYDSWSPAMTVSSICISI
Sbjct: 61  ETYQLQVDFPEHYPMEAPQVIFLHPAPLHPHIYSNGHICLDILYDSWSPAMTVSSICISI 120

Query: 121 LSMLSSSTAKQRPDDNDRYVKNCRNGRSPKETRWWFHDDKV 162
           LSMLSSSTAKQRPDDNDRYVKNCRNGRSPKETRWWFHDDKV
Sbjct: 121 LSMLSSSTAKQRPDDNDRYVKNCRNGRSPKETRWWFHDDKV 161

[Close]

BLAST of Cp4.1LG01g07060.1 vs. TrEMBL
Match: A0A061DLV4_THECC (Ubiquitin-conjugating enzyme 16 OS=Theobroma cacao GN=TCM_000290 PE=3 SV=1)

HSP 1 Score: 333.2 bits (853), Expect = 1.8e-88
Identity = 157/161 (97.52%), Postives = 159/161 (98.76%), Query Frame = 1


Query: 1   MTSSSDSARKALSKIACNRLQKELVEWQVNPPAGFKHKVTDNLQRWVIEVNGAPGTLYAN 60
           MTSSS SARKALSKIACNRLQKELVEWQVNPP+GFKHKVTDNLQRWVIEVNGAPGTLYAN
Sbjct: 1   MTSSSASARKALSKIACNRLQKELVEWQVNPPSGFKHKVTDNLQRWVIEVNGAPGTLYAN 60

Query: 61  ETYQLQVDFPEHYPMEAPQVIFLHPAPLHPHIYSNGHICLDILYDSWSPAMTVSSICISI 120
           ETYQLQVDFPEHYPMEAPQVIFLHPAPLHPHIYSNGHICLDILYDSWSPAMTVSSICISI
Sbjct: 61  ETYQLQVDFPEHYPMEAPQVIFLHPAPLHPHIYSNGHICLDILYDSWSPAMTVSSICISI 120

Query: 121 LSMLSSSTAKQRPDDNDRYVKNCRNGRSPKETRWWFHDDKV 162
           LSMLSSST KQRP+DNDRYVKNCRNGRSPKETRWWFHDDKV
Sbjct: 121 LSMLSSSTVKQRPEDNDRYVKNCRNGRSPKETRWWFHDDKV 161

[Close]

BLAST of Cp4.1LG01g07060.1 vs. TrEMBL
Match: A0A067KYV1_JATCU (Uncharacterized protein OS=Jatropha curcas GN=JCGZ_08281 PE=3 SV=1)

HSP 1 Score: 331.3 bits (848), Expect = 6.8e-88
Identity = 155/161 (96.27%), Postives = 158/161 (98.14%), Query Frame = 1


Query: 1   MTSSSDSARKALSKIACNRLQKELVEWQVNPPAGFKHKVTDNLQRWVIEVNGAPGTLYAN 60
           MTSSS +ARKALSKIACNRLQKELVEWQVNPP GFKHKVTDNLQRWVIEVNGAPGTLYAN
Sbjct: 1   MTSSSANARKALSKIACNRLQKELVEWQVNPPTGFKHKVTDNLQRWVIEVNGAPGTLYAN 60

Query: 61  ETYQLQVDFPEHYPMEAPQVIFLHPAPLHPHIYSNGHICLDILYDSWSPAMTVSSICISI 120
           ETYQLQVDFPEHYPMEAPQVIFLHPAPLHPHIYSNGHICLDILYDSWSPAMTVSS+CISI
Sbjct: 61  ETYQLQVDFPEHYPMEAPQVIFLHPAPLHPHIYSNGHICLDILYDSWSPAMTVSSVCISI 120

Query: 121 LSMLSSSTAKQRPDDNDRYVKNCRNGRSPKETRWWFHDDKV 162
           LSMLSSST KQRP+DNDRYVKNCRNGRSPKETRWWFHDDKV
Sbjct: 121 LSMLSSSTVKQRPEDNDRYVKNCRNGRSPKETRWWFHDDKV 161

[Close]

BLAST of Cp4.1LG01g07060.1 vs. TrEMBL
Match: W9SBS2_9ROSA (Putative ubiquitin-conjugating enzyme E2 16 OS=Morus notabilis GN=L484_013245 PE=3 SV=1)

HSP 1 Score: 328.6 bits (841), Expect = 4.4e-87
Identity = 155/161 (96.27%), Postives = 158/161 (98.14%), Query Frame = 1


Query: 1   MTSSSDSARKALSKIACNRLQKELVEWQVNPPAGFKHKVTDNLQRWVIEVNGAPGTLYAN 60
           MTSSS +ARKALSKIACNRLQKEL+EWQVNPPAGFKHKVTDNLQRWVIEV GAPGTLYAN
Sbjct: 1   MTSSSANARKALSKIACNRLQKELLEWQVNPPAGFKHKVTDNLQRWVIEVIGAPGTLYAN 60

Query: 61  ETYQLQVDFPEHYPMEAPQVIFLHPAPLHPHIYSNGHICLDILYDSWSPAMTVSSICISI 120
           ETYQLQVDFPEHYPMEAPQVIFLHPAPLHPHIYSNGHICLDILYDSWSPAMTVSSICISI
Sbjct: 61  ETYQLQVDFPEHYPMEAPQVIFLHPAPLHPHIYSNGHICLDILYDSWSPAMTVSSICISI 120

Query: 121 LSMLSSSTAKQRPDDNDRYVKNCRNGRSPKETRWWFHDDKV 162
           LSMLSSST KQRP+DNDRYVKNCRNGRSPKETRWWFHDDKV
Sbjct: 121 LSMLSSSTVKQRPEDNDRYVKNCRNGRSPKETRWWFHDDKV 161

[Close]

BLAST of Cp4.1LG01g07060.1 vs. TrEMBL
Match: B9MXK5_POPTR (UBIQUITIN-CONJUGATING ENZYME 17 family protein OS=Populus trichocarpa GN=POPTR_0005s12060g PE=3 SV=1)

HSP 1 Score: 326.6 bits (836), Expect = 1.7e-86
Identity = 153/161 (95.03%), Postives = 156/161 (96.89%), Query Frame = 1


Query: 1   MTSSSDSARKALSKIACNRLQKELVEWQVNPPAGFKHKVTDNLQRWVIEVNGAPGTLYAN 60
           MTSSS + RKALSKIACNRLQKELVEWQVNPP GFKHKVTDNLQRWVIEV GAPGTLYAN
Sbjct: 1   MTSSSTTTRKALSKIACNRLQKELVEWQVNPPTGFKHKVTDNLQRWVIEVIGAPGTLYAN 60

Query: 61  ETYQLQVDFPEHYPMEAPQVIFLHPAPLHPHIYSNGHICLDILYDSWSPAMTVSSICISI 120
           ETYQLQVDFPEHYPMEAPQVIFLHPAPLHPHIYSNGHICLDILYDSWSPAMTVSS+CISI
Sbjct: 61  ETYQLQVDFPEHYPMEAPQVIFLHPAPLHPHIYSNGHICLDILYDSWSPAMTVSSVCISI 120

Query: 121 LSMLSSSTAKQRPDDNDRYVKNCRNGRSPKETRWWFHDDKV 162
           LSMLSSST KQRP+DNDRYVKNCRNGRSPKETRWWFHDDKV
Sbjct: 121 LSMLSSSTVKQRPEDNDRYVKNCRNGRSPKETRWWFHDDKV 161

[Close]

BLAST of Cp4.1LG01g07060.1 vs. TAIR10
Match: AT1G75440.1 (AT1G75440.1 ubiquitin-conjugating enzyme 16)

HSP 1 Score: 311.2 bits (796), Expect = 3.7e-85
Identity = 145/161 (90.06%), Postives = 152/161 (94.41%), Query Frame = 1


Query: 1   MTSSSDSARKALSKIACNRLQKELVEWQVNPPAGFKHKVTDNLQRWVIEVNGAPGTLYAN 60
           M+SS   +RK LSKIA NRLQKELVEWQ+NPP GFKHKVTDNLQRW+IEV GAPGTLYAN
Sbjct: 1   MSSSGAPSRKTLSKIATNRLQKELVEWQMNPPTGFKHKVTDNLQRWIIEVIGAPGTLYAN 60

Query: 61  ETYQLQVDFPEHYPMEAPQVIFLHPAPLHPHIYSNGHICLDILYDSWSPAMTVSSICISI 120
           +TYQLQVDFPEHYPME+PQVIFLHPAPLHPHIYSNGHICLDILYDSWSPAMTVSSICISI
Sbjct: 61  DTYQLQVDFPEHYPMESPQVIFLHPAPLHPHIYSNGHICLDILYDSWSPAMTVSSICISI 120

Query: 121 LSMLSSSTAKQRPDDNDRYVKNCRNGRSPKETRWWFHDDKV 162
           LSMLSSST KQRP DNDRYVKNC+NGRSPKETRWWFHDDKV
Sbjct: 121 LSMLSSSTEKQRPTDNDRYVKNCKNGRSPKETRWWFHDDKV 161

[Close]

BLAST of Cp4.1LG01g07060.1 vs. TAIR10
Match: AT5G42990.1 (AT5G42990.1 ubiquitin-conjugating enzyme 18)

HSP 1 Score: 308.5 bits (789), Expect = 2.4e-84
Identity = 143/161 (88.82%), Postives = 151/161 (93.79%), Query Frame = 1


Query: 1   MTSSSDSARKALSKIACNRLQKELVEWQVNPPAGFKHKVTDNLQRWVIEVNGAPGTLYAN 60
           MTSSS  +RKALSKIACNRLQKEL EWQVNPP GFKH+VTDNLQ+WVIEV GAPGTLYAN
Sbjct: 1   MTSSSSPSRKALSKIACNRLQKELSEWQVNPPTGFKHRVTDNLQKWVIEVTGAPGTLYAN 60

Query: 61  ETYQLQVDFPEHYPMEAPQVIFLHPAPLHPHIYSNGHICLDILYDSWSPAMTVSSICISI 120
           ETY LQV+FP+HYPMEAPQVIF+ PAPLHPHIYSNGHICLDILYDSWSPAMTVSS+CISI
Sbjct: 61  ETYNLQVEFPQHYPMEAPQVIFVPPAPLHPHIYSNGHICLDILYDSWSPAMTVSSVCISI 120

Query: 121 LSMLSSSTAKQRPDDNDRYVKNCRNGRSPKETRWWFHDDKV 162
           LSMLSSS  KQRP DNDRYVKNC+NGRSPKETRWWFHDDKV
Sbjct: 121 LSMLSSSPEKQRPTDNDRYVKNCKNGRSPKETRWWFHDDKV 161

[Close]

BLAST of Cp4.1LG01g07060.1 vs. TAIR10
Match: AT1G45050.1 (AT1G45050.1 Ubiquitin-conjugating enzyme family protein)

HSP 1 Score: 305.1 bits (780), Expect = 2.6e-83
Identity = 140/161 (86.96%), Postives = 151/161 (93.79%), Query Frame = 1


Query: 1   MTSSSDSARKALSKIACNRLQKELVEWQVNPPAGFKHKVTDNLQRWVIEVNGAPGTLYAN 60
           MTSSS  +RKALSKIACNRLQKEL EWQ+NPP GF+HKVTDNLQ+W I+V GAPGTLYAN
Sbjct: 1   MTSSSAPSRKALSKIACNRLQKELSEWQLNPPTGFRHKVTDNLQKWTIDVTGAPGTLYAN 60

Query: 61  ETYQLQVDFPEHYPMEAPQVIFLHPAPLHPHIYSNGHICLDILYDSWSPAMTVSSICISI 120
           ETYQLQV+FPEHYPMEAPQV+F+ PAP HPHIYSNGHICLDILYDSWSPAMTV+S+CISI
Sbjct: 61  ETYQLQVEFPEHYPMEAPQVVFVSPAPSHPHIYSNGHICLDILYDSWSPAMTVNSVCISI 120

Query: 121 LSMLSSSTAKQRPDDNDRYVKNCRNGRSPKETRWWFHDDKV 162
           LSMLSSS AKQRP DNDRYVKNC+NGRSPKETRWWFHDDKV
Sbjct: 121 LSMLSSSPAKQRPADNDRYVKNCKNGRSPKETRWWFHDDKV 161

[Close]

BLAST of Cp4.1LG01g07060.1 vs. TAIR10
Match: AT4G36410.1 (AT4G36410.1 ubiquitin-conjugating enzyme 17)

HSP 1 Score: 292.0 bits (746), Expect = 2.3e-79
Identity = 132/161 (81.99%), Postives = 149/161 (92.55%), Query Frame = 1


Query: 1   MTSSSDSARKALSKIACNRLQKELVEWQVNPPAGFKHKVTDNLQRWVIEVNGAPGTLYAN 60
           MTSSS+S RK L+KIA NRLQKE +EWQ NPP+GFKH+V+DNLQRW+IEV+G PGTLYAN
Sbjct: 1   MTSSSESTRKGLTKIATNRLQKEFMEWQTNPPSGFKHRVSDNLQRWIIEVHGVPGTLYAN 60

Query: 61  ETYQLQVDFPEHYPMEAPQVIFLHPAPLHPHIYSNGHICLDILYDSWSPAMTVSSICISI 120
           ETYQLQV+FPEHYPMEAPQVIF HPAPLHPHIYSNGHICLD+LYDSWSPAM +SSIC+SI
Sbjct: 61  ETYQLQVEFPEHYPMEAPQVIFQHPAPLHPHIYSNGHICLDVLYDSWSPAMRLSSICLSI 120

Query: 121 LSMLSSSTAKQRPDDNDRYVKNCRNGRSPKETRWWFHDDKV 162
           LSMLSSS+ KQ+P DND Y+KNC++GRSPKETRW FHDDKV
Sbjct: 121 LSMLSSSSVKQKPKDNDHYLKNCKHGRSPKETRWRFHDDKV 161

[Close]

BLAST of Cp4.1LG01g07060.1 vs. TAIR10
Match: AT3G08690.1 (AT3G08690.1 ubiquitin-conjugating enzyme 11)

HSP 1 Score: 84.7 bits (208), Expect = 5.6e-17
Identity = 46/122 (37.70%), Postives = 69/122 (56.56%), Query Frame = 1


Query: 15  IACNRLQKELVEWQVNPPAGFKH-KVTDNLQRWVIEVNGAPGTLYANETYQLQVDFPEHY 74
           +A  R+ KEL + Q +PP+      V +++  W   + G P + YA   + + + FP  Y
Sbjct: 1   MASKRILKELKDLQKDPPSNCSAGPVAEDMFHWQATIMGPPESPYAGGVFLVSIHFPPDY 60

Query: 75  PMEAPQVIFLHPAPLHPHIYSNGHICLDILYDSWSPAMTVSSICISILSMLSSSTAKQRP 134
           P + P+V F      HP+I SNG ICLDIL + WSPA+T+S + +SI S+L+       P
Sbjct: 61  PFKPPKVSFKTKV-YHPNINSNGSICLDILKEQWSPALTISKVLLSICSLLTD----PNP 117

Query: 135 DD 136
           DD
Sbjct: 121 DD 117

[Close]

BLAST of Cp4.1LG01g07060.1 vs. NCBI nr
Match: gi|659102410|ref|XP_008452114.1| (PREDICTED: probable ubiquitin-conjugating enzyme E2 16 [Cucumis melo])

HSP 1 Score: 337.8 bits (865), Expect = 1.0e-89
Identity = 160/161 (99.38%), Postives = 160/161 (99.38%), Query Frame = 1


Query: 1   MTSSSDSARKALSKIACNRLQKELVEWQVNPPAGFKHKVTDNLQRWVIEVNGAPGTLYAN 60
           MTSSSDSA KALSKIACNRLQKELVEWQVNPPAGFKHKVTDNLQRWVIEVNGAPGTLYAN
Sbjct: 1   MTSSSDSALKALSKIACNRLQKELVEWQVNPPAGFKHKVTDNLQRWVIEVNGAPGTLYAN 60

Query: 61  ETYQLQVDFPEHYPMEAPQVIFLHPAPLHPHIYSNGHICLDILYDSWSPAMTVSSICISI 120
           ETYQLQVDFPEHYPMEAPQVIFLHPAPLHPHIYSNGHICLDILYDSWSPAMTVSSICISI
Sbjct: 61  ETYQLQVDFPEHYPMEAPQVIFLHPAPLHPHIYSNGHICLDILYDSWSPAMTVSSICISI 120

Query: 121 LSMLSSSTAKQRPDDNDRYVKNCRNGRSPKETRWWFHDDKV 162
           LSMLSSSTAKQRPDDNDRYVKNCRNGRSPKETRWWFHDDKV
Sbjct: 121 LSMLSSSTAKQRPDDNDRYVKNCRNGRSPKETRWWFHDDKV 161

[Close]

BLAST of Cp4.1LG01g07060.1 vs. NCBI nr
Match: gi|590703187|ref|XP_007046806.1| (Ubiquitin-conjugating enzyme 16 [Theobroma cacao])

HSP 1 Score: 333.2 bits (853), Expect = 2.6e-88
Identity = 157/161 (97.52%), Postives = 159/161 (98.76%), Query Frame = 1


Query: 1   MTSSSDSARKALSKIACNRLQKELVEWQVNPPAGFKHKVTDNLQRWVIEVNGAPGTLYAN 60
           MTSSS SARKALSKIACNRLQKELVEWQVNPP+GFKHKVTDNLQRWVIEVNGAPGTLYAN
Sbjct: 1   MTSSSASARKALSKIACNRLQKELVEWQVNPPSGFKHKVTDNLQRWVIEVNGAPGTLYAN 60

Query: 61  ETYQLQVDFPEHYPMEAPQVIFLHPAPLHPHIYSNGHICLDILYDSWSPAMTVSSICISI 120
           ETYQLQVDFPEHYPMEAPQVIFLHPAPLHPHIYSNGHICLDILYDSWSPAMTVSSICISI
Sbjct: 61  ETYQLQVDFPEHYPMEAPQVIFLHPAPLHPHIYSNGHICLDILYDSWSPAMTVSSICISI 120

Query: 121 LSMLSSSTAKQRPDDNDRYVKNCRNGRSPKETRWWFHDDKV 162
           LSMLSSST KQRP+DNDRYVKNCRNGRSPKETRWWFHDDKV
Sbjct: 121 LSMLSSSTVKQRPEDNDRYVKNCRNGRSPKETRWWFHDDKV 161

[Close]

BLAST of Cp4.1LG01g07060.1 vs. NCBI nr
Match: gi|802600299|ref|XP_012072873.1| (PREDICTED: probable ubiquitin-conjugating enzyme E2 16 isoform X2 [Jatropha curcas])

HSP 1 Score: 331.3 bits (848), Expect = 9.7e-88
Identity = 155/161 (96.27%), Postives = 158/161 (98.14%), Query Frame = 1


Query: 1   MTSSSDSARKALSKIACNRLQKELVEWQVNPPAGFKHKVTDNLQRWVIEVNGAPGTLYAN 60
           MTSSS +ARKALSKIACNRLQKELVEWQVNPP GFKHKVTDNLQRWVIEVNGAPGTLYAN
Sbjct: 1   MTSSSANARKALSKIACNRLQKELVEWQVNPPTGFKHKVTDNLQRWVIEVNGAPGTLYAN 60

Query: 61  ETYQLQVDFPEHYPMEAPQVIFLHPAPLHPHIYSNGHICLDILYDSWSPAMTVSSICISI 120
           ETYQLQVDFPEHYPMEAPQVIFLHPAPLHPHIYSNGHICLDILYDSWSPAMTVSS+CISI
Sbjct: 61  ETYQLQVDFPEHYPMEAPQVIFLHPAPLHPHIYSNGHICLDILYDSWSPAMTVSSVCISI 120

Query: 121 LSMLSSSTAKQRPDDNDRYVKNCRNGRSPKETRWWFHDDKV 162
           LSMLSSST KQRP+DNDRYVKNCRNGRSPKETRWWFHDDKV
Sbjct: 121 LSMLSSSTVKQRPEDNDRYVKNCRNGRSPKETRWWFHDDKV 161

[Close]

BLAST of Cp4.1LG01g07060.1 vs. NCBI nr
Match: gi|1009144626|ref|XP_015889904.1| (PREDICTED: probable ubiquitin-conjugating enzyme E2 16 [Ziziphus jujuba])

HSP 1 Score: 330.5 bits (846), Expect = 1.7e-87
Identity = 155/161 (96.27%), Postives = 158/161 (98.14%), Query Frame = 1


Query: 1   MTSSSDSARKALSKIACNRLQKELVEWQVNPPAGFKHKVTDNLQRWVIEVNGAPGTLYAN 60
           MTSSS ++RKALSKIACNRLQKELVEWQVNPP GFKHKVTDNLQRWVIEVNGAPGTLYAN
Sbjct: 1   MTSSSATSRKALSKIACNRLQKELVEWQVNPPTGFKHKVTDNLQRWVIEVNGAPGTLYAN 60

Query: 61  ETYQLQVDFPEHYPMEAPQVIFLHPAPLHPHIYSNGHICLDILYDSWSPAMTVSSICISI 120
           ETYQLQVDFPEHYPMEAPQVIFLHPAPLHPHIYSNGHICLDILYDSWSPAMTVSSICISI
Sbjct: 61  ETYQLQVDFPEHYPMEAPQVIFLHPAPLHPHIYSNGHICLDILYDSWSPAMTVSSICISI 120

Query: 121 LSMLSSSTAKQRPDDNDRYVKNCRNGRSPKETRWWFHDDKV 162
           LSMLSSST KQRP+DNDRYVKNCRNGRSPKETRWWFHDDKV
Sbjct: 121 LSMLSSSTVKQRPEDNDRYVKNCRNGRSPKETRWWFHDDKV 161

[Close]

BLAST of Cp4.1LG01g07060.1 vs. NCBI nr
Match: gi|1009168305|ref|XP_015902587.1| (PREDICTED: probable ubiquitin-conjugating enzyme E2 16 [Ziziphus jujuba])

HSP 1 Score: 328.9 bits (842), Expect = 4.8e-87
Identity = 155/161 (96.27%), Postives = 157/161 (97.52%), Query Frame = 1


Query: 1   MTSSSDSARKALSKIACNRLQKELVEWQVNPPAGFKHKVTDNLQRWVIEVNGAPGTLYAN 60
           MTS+S S+RKALSKIACNRLQKELVEWQVNPP GFKHKVTDNLQRWVIEVNGAPGTLYAN
Sbjct: 1   MTSTSASSRKALSKIACNRLQKELVEWQVNPPTGFKHKVTDNLQRWVIEVNGAPGTLYAN 60

Query: 61  ETYQLQVDFPEHYPMEAPQVIFLHPAPLHPHIYSNGHICLDILYDSWSPAMTVSSICISI 120
           ETYQLQVDFPEHYPMEAPQVIFLHPAPLHPHIYSNGHICLDILYDSWSPAMTVSSICISI
Sbjct: 61  ETYQLQVDFPEHYPMEAPQVIFLHPAPLHPHIYSNGHICLDILYDSWSPAMTVSSICISI 120

Query: 121 LSMLSSSTAKQRPDDNDRYVKNCRNGRSPKETRWWFHDDKV 162
           LSMLSSST KQRP DNDRYVKNCRNGRSPKETRWWFHDDKV
Sbjct: 121 LSMLSSSTVKQRPADNDRYVKNCRNGRSPKETRWWFHDDKV 161

The following BLAST results are available for this feature:

BLAST of Cp4.1LG01g07060.1 vs. Swiss-Prot


Match Name	E-value	Identity	Description
UBC16_ARATH	6.5e-84	90.06	Probable ubiquitin-conjugating enzyme E2 16 OS=Arabidopsis thaliana GN=UBC16 PE=...	[more]
UBC18_ARATH	4.2e-83	88.82	Probable ubiquitin-conjugating enzyme E2 18 OS=Arabidopsis thaliana GN=UBC18 PE=...	[more]
UBC15_ARATH	4.7e-82	86.96	Ubiquitin-conjugating enzyme 15 OS=Arabidopsis thaliana GN=UBC15 PE=2 SV=2	[more]
UBC17_ARATH	4.1e-78	81.99	Probable ubiquitin-conjugating enzyme E2 17 OS=Arabidopsis thaliana GN=UBC17 PE=...	[more]
UBE2W_DICDI	1.2e-42	56.64	Probable ubiquitin-conjugating enzyme E2 W OS=Dictyostelium discoideum GN=ube2w ...	[more]

BLAST of Cp4.1LG01g07060.1 vs. TrEMBL


Match Name	E-value	Identity	Description
A0A0A0KUH0_CUCSA	7.2e-90	99.38	Uncharacterized protein OS=Cucumis sativus GN=Csa_4G045000 PE=3 SV=1	[more]
A0A061DLV4_THECC	1.8e-88	97.52	Ubiquitin-conjugating enzyme 16 OS=Theobroma cacao GN=TCM_000290 PE=3 SV=1	[more]
A0A067KYV1_JATCU	6.8e-88	96.27	Uncharacterized protein OS=Jatropha curcas GN=JCGZ_08281 PE=3 SV=1	[more]
W9SBS2_9ROSA	4.4e-87	96.27	Putative ubiquitin-conjugating enzyme E2 16 OS=Morus notabilis GN=L484_013245 PE...	[more]
B9MXK5_POPTR	1.7e-86	95.03	UBIQUITIN-CONJUGATING ENZYME 17 family protein OS=Populus trichocarpa GN=POPTR_0...	[more]

BLAST of Cp4.1LG01g07060.1 vs. TAIR10


Match Name	E-value	Identity	Description
AT1G75440.1	3.7e-85	90.06	ubiquitin-conjugating enzyme 16	[more]
AT5G42990.1	2.4e-84	88.82	ubiquitin-conjugating enzyme 18	[more]
AT1G45050.1	2.6e-83	86.96	Ubiquitin-conjugating enzyme family protein	[more]
AT4G36410.1	2.3e-79	81.99	ubiquitin-conjugating enzyme 17	[more]
AT3G08690.1	5.6e-17	37.70	ubiquitin-conjugating enzyme 11	[more]

BLAST of Cp4.1LG01g07060.1 vs. NCBI nr


Match Name	E-value	Identity	Description
gi\|659102410\|ref\|XP_008452114.1\|	1.0e-89	99.38	PREDICTED: probable ubiquitin-conjugating enzyme E2 16 [Cucumis melo]	[more]
gi\|590703187\|ref\|XP_007046806.1\|	2.6e-88	97.52	Ubiquitin-conjugating enzyme 16 [Theobroma cacao]	[more]
gi\|802600299\|ref\|XP_012072873.1\|	9.7e-88	96.27	PREDICTED: probable ubiquitin-conjugating enzyme E2 16 isoform X2 [Jatropha curc...	[more]
gi\|1009144626\|ref\|XP_015889904.1\|	1.7e-87	96.27	PREDICTED: probable ubiquitin-conjugating enzyme E2 16 [Ziziphus jujuba]	[more]
gi\|1009168305\|ref\|XP_015902587.1\|	4.8e-87	96.27	PREDICTED: probable ubiquitin-conjugating enzyme E2 16 [Ziziphus jujuba]	[more]

Annotated Terms

The following terms have been associated with this mRNA:

Vocabulary: **INTERPRO**
Term	Definition
IPR023313	UBQ-conjugating_AS
IPR016135	UBQ-conjugating_enzyme/RWD
IPR000608	UBQ-conjugat_E2

GO Annotation

GO Assignments

This mRNA is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0008152	metabolic process
cellular_component	GO:0005575	cellular_component
molecular_function	GO:0016874	ligase activity

Relationships

This mRNA is a part of the following gene feature(s):


Feature Name	Unique Name	Type
Cp4.1LG01g07060	Cp4.1LG01g07060	gene

The following polypeptide feature(s) derives from this mRNA:


Feature Name	Unique Name	Type
Cp4.1LG01g07060.1	Cp4.1LG01g07060.1-protein	polypeptide

The following five_prime_UTR feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
Cp4.1LG01g07060.1:five_prime_utr:001	Cp4.1LG01g07060.1:five_prime_utr:001	five_prime_UTR

The following CDS feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
Cp4.1LG01g07060.1:cds:006	Cp4.1LG01g07060.1:cds:006	CDS
Cp4.1LG01g07060.1:cds:005	Cp4.1LG01g07060.1:cds:005	CDS
Cp4.1LG01g07060.1:cds:004	Cp4.1LG01g07060.1:cds:004	CDS
Cp4.1LG01g07060.1:cds:003	Cp4.1LG01g07060.1:cds:003	CDS
Cp4.1LG01g07060.1:cds:002	Cp4.1LG01g07060.1:cds:002	CDS
Cp4.1LG01g07060.1:cds:001	Cp4.1LG01g07060.1:cds:001	CDS

The following three_prime_UTR feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
Cp4.1LG01g07060.1:three_prime_utr:001	Cp4.1LG01g07060.1:three_prime_utr:001	three_prime_UTR

InterPro

Analysis Name: InterPro Annotations of Cucurbita pepo
Date Performed: 2017-12-02


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR000608	Ubiquitin-conjugating enzyme E2	PFAM	PF00179	UQ_con	coord: 19..154 score: 2.4
IPR000608	Ubiquitin-conjugating enzyme E2	PROFILE	PS50127	UBIQUITIN_CONJUGAT_2	coord: 18..137 score: 27
IPR016135	Ubiquitin-conjugating enzyme/RWD-like	GENE3D	G3DSA:3.10.110.10		coord: 5..140 score: 2.3
IPR016135	Ubiquitin-conjugating enzyme/RWD-like	unknown	SSF54495	UBC-like	coord: 8..142 score: 1.17
IPR023313	Ubiquitin-conjugating enzyme, active site	PROSITE	PS00183	UBIQUITIN_CONJUGAT_1	coord: 88..103 scor
None	No IPR available	PANTHER	PTHR24067	UBIQUITIN-CONJUGATING ENZYME E2	coord: 1..161 score: 3.6E
None	No IPR available	PANTHER	PTHR24067:SF155	UBIQUITIN-CONJUGATING ENZYME E2 16-RELATED	coord: 1..161 score: 3.6E
None	No IPR available	SMART	SM00212	ubc_7	coord: 18..161 score: 3.8