Cp4.1LG01g06200 (gene) Cucurbita pepo (Zucchini)
The following sequences are available for this feature:
Legend: five_prime_UTRCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.AACCCACAACTCGAAGCCACATTTGTTAGAGTTATTTGAAGGATAAGAAAATGTCCCGCGGTACTCCGATGAACGCAGCAAACAGAACGCCATGGTCCACCGGCCTCTGTGACTGCTTCGACGACATGGGATCATGTAACTTTATTCTCCTTCTCCATCTCAGTTGTTATTTTTTTTTTAATGGTTTTAAATTATTATTTATGTAATATTTTATCATTATTATATTCATAATTAAGATTTATAAATTTATTTAATTGAAAATTTTATATCTTAACTAATTGAGTTATATTTATGAATTTAATTTACAGGTTGCTGTACGTTTTGGTGTCCATGCGTGCCTTTCGGGCAAGCCGCGGAGATTATAGATGAAGGATCAACTTGTAAGCTTCATTCCATCCATGGCTAACCTAACATTGTACTAAACCTAATATTTAGCCAAAGAAAACAAAAAGTCTAACATCTATAGGGAGAAGTTTCTACATCCCATGTGATCTCACAATCCACCCCACTTGGAGGTCCAGCGTCTTCGTTGACACATGGCTCAATGTATGGATCTCATATTATTTATAACAGTTGAAGCCCACCGCTAGTTAATATTGTCATTTTTCCCAGTTTTACTCTAATATAAAATTTAAGAAGTGAGTCTAATATAAAATTCTCATAATAGTTCAATTTCTATTCCTACCAAACCGATCCGTTCGGTTCGATTCTGGATCGGATCCAAAACTAGGGAAACCGAACCGAGTATTCGGTAGCAATAATATTGCAAGAAGTGGGCCTAAAATTGATTGAAAGTATTCATTAAAGAAGAGATTATTTCCAAGATAGCAGCAATGATTGGAGGCACTTAGTGTTGAACTGAAAATGACAGAACAGTTTATATGTTTATGGTTGTGGATGCAGCCTGTTTAGGTCAAGCATCGATTTTCACTGTGATTTCTTGCTTTACGCCCTGCATATGCCTTTATACATGCCATTATCGTTCTCGACTGAGGGCAAAGTATGAGCTTCAACAAACTCCCTGCAACGATTGCTGTGTTCATTTTTGGTGTTTGGGTTGTGCAATGTGTCAAGAGTACCGTGAGCTCAAGAATCGTGGTTTCGACATGCATATCGGTATTCTCAATCTCTTCAACTTTCAAAAAACTTCAAAAACACCTTTAAACTTTTTATTAAGGTTCAATAATACTCTTACCGTATGTATAGACGAAATCATTCGTTCTACATTTTTTTTCATGAACTTTCAAAAGTAACATTAATATTTTTAAACTTTTAGAAAAAAAAAAATTAAAAATTTGAAGAACTTTAAGTATGGTATTAACCCATTCAAACTTTTTTTTTTAAAAGTTCAACAGTATTAATGAAACTTTTTAGAGTTAATATATTTTTGAAACAAAGTATTAACCATTTTCCTCTAAAACTTACCTTAGGTATATTTTTTTTAATTTTTTTTAAAATTTTAAGAGTATTTTTATTACTTTAACCTTGTATCTTATAAAAACGATAATAGTGAACGTTGTGCTCAGGTTGGCAAGGAAACGTGCAGAAACAAAATAAGGGATTAGAGATCCCGCCTATGGTGGAAGGACAAATGAAACGTTAGAAGTTTGAAAGACTTGGGAAGGAGCAATAAGAATGGTGGTATCCTCTTTGCATTTAGTTGTTTGCATATCTTTATTGGGTTGGTTTGTTCAGGTCAAATTTTAATGCAGTATGTAAGTAGGAATGCCATTGTTTGGATTGAATTTCGGGTTCATTTAAGACCAATAATATTAATGTTCGAGTAACTCATTTTGTAAAATATATGGCCCCAATATCACGTTTAATAATATATATATATATAGAAAACTGTATGGCCCAAATTATAATCTATGATCCAAATATGGCGTTGAATTTGTGATAGAAAAATTATGGAAACCCCCAAAAGAGCATGTGAAGGAAGTGATAGGGTTGATGTCATGTCCAGTGACTTTCCAACCACCACCACTTCACATTTATTTTTCTCTGGCGGCCCCTCCCCTCCGAGTAAGTTTAGGTTAACTCATTTCTTACCAATTTTCATACCAAATATAAAACAACATGTATGACACTCAAAAGTGTGAGTTGGGATGAAGGTTTTATCTTCATTGATATCCACAACGTTTAAATAGGATACAAGATACCAATTAATACCTACAAATAACGAAAATATAAACTAACTAAATCTTGATAATAAAATAAAATATACTACTAATCAAATTTAACTGATATCTAAGTATATTTCCTAACTAATCATATATTACATAACTAATTTAAACTATACATAAGTTGCTCTGACAGACCATGTCGCAAACGATTCTAAAAAGACTCGTGTTAGCATACAAGTAAGAACAAAATATATTGAAAGAATCTGGGTTGGTTTATGGAGATAGTTTTCATAGTAAATAACATGAGTATGTCGTGTTCGATGAATCCAAATTACGAAGGTTGAGTATGGGATATTACAATTTAAAAAATTAAAAAAAAAAAAAAAAAAAAAATTCTCCCAAAGTTTGCATCGTATAAGGTAAGGATTCTTAAATGGACCAAACATTTGAAAAGAAACCCAACTCAAGCAAGACATTGACTTACACTTCCCAAAAATCTTATCCTCGTTGGCTTTTTAAAACCTTACCGCCGAAGCATGACTTTGACTTAAGAGTTACCAAAAAAAAATGTTCACTTTTCAAAAACTTTGTTATAAGAAACATCAATAAATTGGAGAACAGAAGAACTCCACAACCCAGAATTGGAAACCAAATTTGGTTGGCTTAATTATTTGAAGGAAAACAAGATGTCCGGCGGTATTCCGGTGAATGCAGGCAACGGAACCCCATGGTCCACCGGCCTCTGTGACTGCTTCGACGACATGAGATCATGTAACTTCATTCTCCTTCTCCATCTCTATTACTTACAATCATAAAATCATTTTCAAAAATAATTTACTCCTTTTTGTTTATGTTTATCCTTTTAAATTATTATTTATCTAATATTTTTTCAAAAATTTTATATCTCAACCAATTCAATTATATTTATGAATTTAATTTACAGGTTGTTGTACGTTATGGTGTCCATGCGCGTCTTTCGGAAAAGCTGCCGAGATCATAGATGAAGGATCAAGTTGTAAGCTTCATTTCATCTAATGCTAAATTACGTCTAAAGAGATTTTATCAAATTATAAATATGAAAATCAAGGTTTAATATAAAACTTCCATAAATAGTTCGATTTTCATTTGGATTCGATTCTCGATTGGGTCCAAAACTAAGGAAACCGAACTGAGTATTCCATCGTAATAGTATTATTACAAGAAGTGGGTCTAATATTAAGTGTTTATATGTTTATGGTTGTGAATGCAGCCTGTTTGGGTCAGGCATTGCTTTTCAGTGTGATAGCTTGCTTTACGCCCTGCATATTCCTTTATACTTGCTATTATCGTTCCCGACTGAGGGCAAAGTATCAGCTTCAAGAAACCCCCTGCAACGATTGCTGTGTTCACTTTTGGTGTTTGAGTTGTGCAATGTGTCAAGAGCATCGTGAGCTCAAGAATCGTGGTTTAGACCCCCATATCGGTAATCTCAATCTCTTCAACTTTTTTTAACTTTATTTTAAGTTCAAAAATACTCTTATCACTAGTAATATAGAACAAACTGCGTTTTAAAAATACTTAAATTTCAAAATACTTAAATTTCAAAAGTTACGCTTAACATTAAAAAAATTTGAGCTTAAAGATATCTATAAGGTGTGGACAACCATTTTATCTATATATGGATCATTTCTTTATATTTTTTTTTAATAAAAGTTAAGATGTTAAATACTACTTTTAAAATTTTATGAGTATTTTTTAAATATAATATTAATGGTAAGAATTTTTTTTTTTTTTAATTAATGAAAAATATTTTTTTAAATGTTACTTGCTATAAGTATATTATTTATACTTTTTAAAAGTTTAAGAATATTATTTAAACTTTTGAAAGTTGGTATTTTTTAGACAAAAGTATAAAATTCAAGAGTATTTTTATTGCTAAGGCGATGATATTGATCGTCATGCTCAGGTTGGCAAGGAAACATGCAGAAACAAAATTACGGTATAGAGATCCCGCCCGTGGTCGAAGGACAAATGAGACGTTGAAGTTTGAAAGACTTAAAAAGAGTCTTATGAAAGGGAAGGAATAAGAATGGTTGTTTCCCCTCTGCATTTCTATGTCGGAATCTTTATATTGAGTTTCTCTTTTCTACCGTTCGTATGTTCAGGTCAAGTTTTAATGTAATATGGCTGTCATGGTTTGGATAGAATTTCGAGTTCAATTAGGACCAATTCTACTACGTCATCTTCAAACTTTTAAATTTTTTAGTTCAAATTCTACCGTGCATGA AACCCACAACTCGAAGCCACATTTGTTAGAGTTATTTGAAGGATAAGAAAATGTCCCGCGGTACTCCGATGAACGCAGCAAACAGAACGCCATGGTCCACCGGCCTCTGTGACTGCTTCGACGACATGGGATCATGTTGCTGTACGTTTTGGTGTCCATGCGTGCCTTTCGGGCAAGCCGCGGAGATTATAGATGAAGGATCAACTTCCTGTTTAGGTCAAGCATCGATTTTCACTGTGATTTCTTGCTTTACGCCCTGCATATGCCTTTATACATGCCATTATCGTTCTCGACTGAGGGCAAAGTATGAGCTTCAACAAACTCCCTGCAACGATTGCTGTGTTCATTTTTGGTGTTTGGGTTGTGCAATGTGTCAAGAGTACCGTGAGCTCAAGAATCGTGGTTTCGACATGCATATCGGTCAAATTTTAATGCAGTATGAAAACAAGATGTCCGGCGGTATTCCGGTGAATGCAGGCAACGGAACCCCATGGTCCACCGGCCTCTGTGACTGCTTCGACGACATGAGATCATGTTGTTGTACGTTATGGTGTCCATGCGCGTCTTTCGGAAAAGCTGCCGAGATCATAGATGAAGGATCAAGTTCCTGTTTGGGTCAGGCATTGCTTTTCAGTGTGATAGCTTGCTTTACGCCCTGCATATTCCTTTATACTTGCTATTATCGTTCCCGACTGAGGGCAAAGTATCAGCTTCAAGAAACCCCCTGCAACGATTGCTGTGTTCACTTTTGGTGTTTGAGTTGTGCAATGTGTCAAGAGCATCGTTGGCAAGGAAACATGCAGAAACAAAATTACGGTATAGAGATCCCGCCCGTGGTCGAAGGACAAATGAGACGTTGAAGTTTGAAAGACTTAAAAAGAGTCTTATGAAAGGGAAGGAATAAGAATGGTTGTTTCCCCTCTGCATTTCTATGTCGGAATCTTTATATTGAGTTTCTCTTTTCTACCGTTCGTATGTTCAGGTCAAGTTTTAATGTAATATGGCTGTCATGGTTTGGATAGAATTTCGAGTTCAATTAGGACCAATTCTACTACGTCATCTTCAAACTTTTAAATTTTTTAGTTCAAATTCTACCGTGCATGA ATGTCCCGCGGTACTCCGATGAACGCAGCAAACAGAACGCCATGGTCCACCGGCCTCTGTGACTGCTTCGACGACATGGGATCATGTTGCTGTACGTTTTGGTGTCCATGCGTGCCTTTCGGGCAAGCCGCGGAGATTATAGATGAAGGATCAACTTCCTGTTTAGGTCAAGCATCGATTTTCACTGTGATTTCTTGCTTTACGCCCTGCATATGCCTTTATACATGCCATTATCGTTCTCGACTGAGGGCAAAGTATGAGCTTCAACAAACTCCCTGCAACGATTGCTGTGTTCATTTTTGGTGTTTGGGTTGTGCAATGTGTCAAGAGTACCGTGAGCTCAAGAATCGTGGTTTCGACATGCATATCGGTCAAATTTTAATGCAGTATGAAAACAAGATGTCCGGCGGTATTCCGGTGAATGCAGGCAACGGAACCCCATGGTCCACCGGCCTCTGTGACTGCTTCGACGACATGAGATCATGTTGTTGTACGTTATGGTGTCCATGCGCGTCTTTCGGAAAAGCTGCCGAGATCATAGATGAAGGATCAAGTTCCTGTTTGGGTCAGGCATTGCTTTTCAGTGTGATAGCTTGCTTTACGCCCTGCATATTCCTTTATACTTGCTATTATCGTTCCCGACTGAGGGCAAAGTATCAGCTTCAAGAAACCCCCTGCAACGATTGCTGTGTTCACTTTTGGTGTTTGAGTTGTGCAATGTGTCAAGAGCATCGTTGGCAAGGAAACATGCAGAAACAAAATTACGGTATAGAGATCCCGCCCGTGGTCGAAGGACAAATGAGACGTTGA MSRGTPMNAANRTPWSTGLCDCFDDMGSCCCTFWCPCVPFGQAAEIIDEGSTSCLGQASIFTVISCFTPCICLYTCHYRSRLRAKYELQQTPCNDCCVHFWCLGCAMCQEYRELKNRGFDMHIGQILMQYENKMSGGIPVNAGNGTPWSTGLCDCFDDMRSCCCTLWCPCASFGKAAEIIDEGSSSCLGQALLFSVIACFTPCIFLYTCYYRSRLRAKYQLQETPCNDCCVHFWCLSCAMCQEHRWQGNMQKQNYGIEIPPVVEGQMRR
BLAST of Cp4.1LG01g06200 vs. Swiss-Prot
Match: CNR2_MAIZE (Cell number regulator 2 OS=Zea mays GN=CNR2 PE=2 SV=1) HSP 1 Score: 160.2 bits (404), Expect = 3.1e-38 Identity = 68/126 (53.97%), Postives = 90/126 (71.43%), Query Frame = 1
BLAST of Cp4.1LG01g06200 vs. Swiss-Prot
Match: PCR2_ARATH (Protein PLANT CADMIUM RESISTANCE 2 OS=Arabidopsis thaliana GN=PCR2 PE=1 SV=1) HSP 1 Score: 151.0 bits (380), Expect = 1.9e-35 Identity = 61/128 (47.66%), Postives = 85/128 (66.41%), Query Frame = 1
BLAST of Cp4.1LG01g06200 vs. Swiss-Prot
Match: CNR7_MAIZE (Cell number regulator 7 OS=Zea mays GN=CNR7 PE=2 SV=1) HSP 1 Score: 148.7 bits (374), Expect = 9.3e-35 Identity = 63/122 (51.64%), Postives = 84/122 (68.85%), Query Frame = 1
BLAST of Cp4.1LG01g06200 vs. Swiss-Prot
Match: CNR9_MAIZE (Cell number regulator 9 OS=Zea mays GN=CNR9 PE=2 SV=1) HSP 1 Score: 147.5 bits (371), Expect = 2.1e-34 Identity = 62/110 (56.36%), Postives = 80/110 (72.73%), Query Frame = 1
BLAST of Cp4.1LG01g06200 vs. Swiss-Prot
Match: CNR10_MAIZE (Cell number regulator 10 OS=Zea mays GN=CNR10 PE=2 SV=1) HSP 1 Score: 146.7 bits (369), Expect = 3.5e-34 Identity = 61/115 (53.04%), Postives = 83/115 (72.17%), Query Frame = 1
BLAST of Cp4.1LG01g06200 vs. TrEMBL
Match: A0A0E0GVY0_ORYNI (Uncharacterized protein OS=Oryza nivara PE=4 SV=1) HSP 1 Score: 279.6 bits (714), Expect = 3.9e-72 Identity = 119/245 (48.57%), Postives = 163/245 (66.53%), Query Frame = 1
BLAST of Cp4.1LG01g06200 vs. TrEMBL
Match: A0A0E0GVX9_ORYNI (Uncharacterized protein OS=Oryza nivara PE=4 SV=1) HSP 1 Score: 260.0 bits (663), Expect = 3.2e-66 Identity = 120/277 (43.32%), Postives = 159/277 (57.40%), Query Frame = 1
BLAST of Cp4.1LG01g06200 vs. TrEMBL
Match: A0A0D3FQX6_9ORYZ (Uncharacterized protein OS=Oryza barthii PE=4 SV=1) HSP 1 Score: 252.3 bits (643), Expect = 6.7e-64 Identity = 116/262 (44.27%), Postives = 153/262 (58.40%), Query Frame = 1
BLAST of Cp4.1LG01g06200 vs. TrEMBL
Match: A0A0E0GVY1_ORYNI (Uncharacterized protein OS=Oryza nivara PE=4 SV=1) HSP 1 Score: 246.5 bits (628), Expect = 3.7e-62 Identity = 114/262 (43.51%), Postives = 152/262 (58.02%), Query Frame = 1
BLAST of Cp4.1LG01g06200 vs. TrEMBL
Match: A0A0D9ZFA4_9ORYZ (Uncharacterized protein OS=Oryza glumipatula PE=4 SV=1) HSP 1 Score: 246.5 bits (628), Expect = 3.7e-62 Identity = 115/262 (43.89%), Postives = 152/262 (58.02%), Query Frame = 1
BLAST of Cp4.1LG01g06200 vs. TAIR10
Match: AT1G14870.1 (AT1G14870.1 PLANT CADMIUM RESISTANCE 2) HSP 1 Score: 151.0 bits (380), Expect = 1.1e-36 Identity = 61/128 (47.66%), Postives = 85/128 (66.41%), Query Frame = 1
BLAST of Cp4.1LG01g06200 vs. TAIR10
Match: AT5G35525.1 (AT5G35525.1 PLAC8 family protein) HSP 1 Score: 144.1 bits (362), Expect = 1.3e-34 Identity = 60/128 (46.88%), Postives = 85/128 (66.41%), Query Frame = 1
BLAST of Cp4.1LG01g06200 vs. TAIR10
Match: AT1G14880.1 (AT1G14880.1 PLANT CADMIUM RESISTANCE 1) HSP 1 Score: 137.5 bits (345), Expect = 1.2e-32 Identity = 58/128 (45.31%), Postives = 79/128 (61.72%), Query Frame = 1
BLAST of Cp4.1LG01g06200 vs. TAIR10
Match: AT1G68610.1 (AT1G68610.1 PLANT CADMIUM RESISTANCE 11) HSP 1 Score: 135.2 bits (339), Expect = 6.0e-32 Identity = 60/113 (53.10%), Postives = 80/113 (70.80%), Query Frame = 1
BLAST of Cp4.1LG01g06200 vs. TAIR10
Match: AT3G18470.1 (AT3G18470.1 PLAC8 family protein) HSP 1 Score: 118.2 bits (295), Expect = 7.6e-27 Identity = 50/110 (45.45%), Postives = 72/110 (65.45%), Query Frame = 1
BLAST of Cp4.1LG01g06200 vs. NCBI nr
Match: gi|659102930|ref|XP_008452392.1| (PREDICTED: cell number regulator 2-like [Cucumis melo]) HSP 1 Score: 226.9 bits (577), Expect = 4.3e-56 Identity = 94/121 (77.69%), Postives = 105/121 (86.78%), Query Frame = 1
BLAST of Cp4.1LG01g06200 vs. NCBI nr
Match: gi|659129456|ref|XP_008464696.1| (PREDICTED: cell number regulator 2-like [Cucumis melo]) HSP 1 Score: 224.9 bits (572), Expect = 1.6e-55 Identity = 97/127 (76.38%), Postives = 108/127 (85.04%), Query Frame = 1
BLAST of Cp4.1LG01g06200 vs. NCBI nr
Match: gi|449449034|ref|XP_004142270.1| (PREDICTED: cell number regulator 2-like [Cucumis sativus]) HSP 1 Score: 222.6 bits (566), Expect = 8.1e-55 Identity = 96/127 (75.59%), Postives = 106/127 (83.46%), Query Frame = 1
BLAST of Cp4.1LG01g06200 vs. NCBI nr
Match: gi|976911024|gb|KVH97686.1| (Uncharacterized protein family Cys-rich [Cynara cardunculus var. scolymus]) HSP 1 Score: 194.9 bits (494), Expect = 1.8e-46 Identity = 93/216 (43.06%), Postives = 125/216 (57.87%), Query Frame = 1
BLAST of Cp4.1LG01g06200 vs. NCBI nr
Match: gi|359472699|ref|XP_003631187.1| (PREDICTED: protein PLANT CADMIUM RESISTANCE 2 [Vitis vinifera]) HSP 1 Score: 183.3 bits (464), Expect = 5.5e-43 Identity = 81/139 (58.27%), Postives = 100/139 (71.94%), Query Frame = 1
The following BLAST results are available for this feature:
The following terms have been associated with this gene:
GO Assignments
This gene is annotated with the following GO terms.
The following mRNA feature(s) are a part of this gene:
Analysis Name: InterPro Annotations of Cucurbita pepo
Date Performed: 2017-12-02
The following gene(s) are orthologous to this gene:
The following gene(s) are paralogous to this gene: None The following block(s) are covering this gene:
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