Lsi04G011140 (gene) Bottle gourd (USVL1VR-Ls) | Cucurbit Genomics Database (CuGenDB)

Overview


Name	Lsi04G011140
Type	gene
Organism	Lagenaria siceraria (Bottle gourd (USVL1VR-Ls))
Description	Plant cadmium resistance 2-like protein
Location	chr04 : 14387628 .. 14391933 (-)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

CAGTGTTAAATTTTTTGGTTGTATTTTTTTAAAGATAAAAAAGTTATGGCCAGCGCGGGCGGTATTCCGGTGAACTCGGCAAATGGGTCCCCGTGGTCCAGCGGCCTCTGTGATTGCTTCTCCGACATGGGATCATGTAAATTCATTCTCCCTCTACTTTATTCTATCTATTACATGTATGTTTATGAGTGATTTTTTACGGATAAAATTACCGCTATTTTGTGTATATGAGTGATTTTCGATCGTTCACTTGAGAGGTATTAGATAAATATGCAAGGTTTTATCTCAAAATTAATTGGCGATATTAAGAATAAACTCATGTATCTGACTCAATACTCGTTTGAGCTTCATGAGCAATGATTACCATATTTAGTAAACAAAATTTCATTTCAAAATCAATTGACAATAAATAAAAAAAAAAAGTAACTCATCTTTCTATAGTGGGATCCTCGATAAGAGGTGATTTTTTTAAAATATTTTTGTCAAATAATTAAGATTTTTGCTCTCATCTTTGTGATTCTTTTAAATGATGGTAGTGGTCAATCACTTGGGAAGTAATTTTCGAGTAATTTTTTAGTCATTTAAATTATAAAAATACCTCTAAAATATTATTAGATTGGTTACAAATTTACCTCCAAACTTTGAAAAGTTTCCTTTTATTTAACCCTTGAAGTTTAAAGTTTTTTCATAACAACTATCGAAAACTTTTGTCGTTAAATTCATGGAAAGAATGTTTGTATTACTTAATTGAACAAACAACATATGAAAATAAATTTGGAGACAAGTTAGTAAAAAAATCTCAAATGACAGAACAAAAATTGGGAGCATGGGGTTGAAAGGAAGAAGACAAAAATACACAAAATGTACCGTATAGAGATGCGTTGTGTATTTTTCTTCATGTATGTGTTTAGATTTGTTCACATAAGCAAATACAAATTTTTCGTCTATGAATTTAACGACAAAACCTTATTATGATCAAACAAGTTTCAAACTTCAAGGATTAAAGTAAAATTCTTAAAAGTTTAGGAATATAATTGAAACCAACTTCATAATTTAAGAGTATTTTTATTTATTTATGTTTCCTTTGTAATTATTTTTTAATTTGTTAATTATGTAATATTTATGCTATAATGTCTCATTTAACTCTTTTCATTTTTTAGGTTGTTGTACGATATGGTGTCCATGTGTGCCTTTTGGGCAAGCCTCAGAGATTATAGATGAAGGATCAACTTGTAAGCTTTAATTCAACAATTGTTTAATTAAGTTCTACTAAACCTATCATCTAACAAAATATATACAAACATAATATTCTAAAGATTCTATAAGGAAAAAAAATCTTTAAAAAAATATCTATTTTTTTCATTAAAGACTTTTTGTGAGTTAAATTACAAGTTTAATTTTTTAAATTTTCAAGTTTGTGTCTATTTGGTCACTAAATTTTTAAAAATGTCAAGTATAGGTCATTGGACTATCAATATGTGACAGATAGATCCTTGAACTTTGAAATATATCTATTGGATTCTTAAATTTTCAATTTTATGTTCATTAAGTTTATAACTTTATATGTGTCTGATAGATCCCTAAGGGCCTGTTGCTAGAGAATCTGGATTCTGGTTTATGTTTTCAGATTCACCGAGTTCAGCAAATATGTGTTTGGTAGACAATCCGAATTTTGTTTCTGAAAACTGTTTTTATATTCTATAATCCAAATAGTGCAAATTCTGAAAACAATATTTTTATGTTTTCATTGTTTGCAGATTTTGAATTTTAAATTTTAAAATGTAGAATTATATTAAATAAGGGTAACAACATTTAGAAATACAGTATGTCATGCTATAAACTCATTTCATTTTTTTAAAAAATATAACATGTATTATGTAATGTTTATAAATTATATAATATTTCAAAATAATAATTATATAATTTTTTTAATATAAATCATATTCATAAATAAATTAACAATGGTCTATTATCAACTAAATATTAGTGGGTAACTACAACTAGTTTTGTGATTTATAAATATATAGTATTAAACACATTTTAAATAGGAAAATTATTATAAACAGAAAAAATATCAAACTATTTAAATATAGAAAAATTTCACTGTCTACCGTGATAGACCGCGAAAAAATTCTATCCCTTAAGCGATAGAAAGCGATAGAATTCTATCGCAGTCTATCGCTGATAGACAATAATAAAAAGTTTCTATATTTATAAATAGTTTGACTCATTTTTCTATATTAAAAAATAACCCTTTTAAATAATTATTTAAATTAGAATCCAATTTCTGAGTCAGCTACCAAACACATATCTGAAAACATGAAATACAACTATGTTTTCATTAAATCTCTTACTTTCAAATTTCTGTTTTCAAATTCTCTACTAAATAGTCCTAAATTTTTCAATTTGTATCTAATTAGTCTTTGGCCTATTAAACATATATTTTTTTAATTCACCTAGCTACTAAACATAAATTAAATTAAAATTTTAAAATGTTATTAGACATAAAATTTATTAGTTTCTATTGTGCCTCAAATTTATGTACTTAGTTAACTTAGTTTCAATTTTGTAAAAGTAATCACTATGTTTTAAAAGCTTTAATTATAACATAAATTGCTAATGATAGTTTTTTTAGTAGGAAAATTTTTACAAATAGAAAAAATGTCAAACTATTTACAGAAAATAGCAAAAAAAAAAACACTGATAGACATTGATAGACTTCTGTCAACATTTATTATTGATAGACTTCTATCATTTCTATCATTGATAGACCATGATAAACTTCTATCAGGGTCTACCACCACTATCTAAAAAATTTGTTATTTTGTGTAAATAGTTTTTTTATTTTTCTATTTTTAAAAATTCTCCTTTCTAGTACTATATATATATAGATGTTCTCTCAATTTCTATACCATGATTTTCACTTTTCTTTAAAAAAAAATTGAGTTCTTAGTCAAAATCTAAAATAAAAGACAAAGTTTTAAAAACTACCATTATTAGTTTTCAAAATTTGGCTTGGCTTTTTAAAACATTAATAGAAAGTAGACAACATAGAATAGTCATTTAAAAGTGAAGGTAGAGTTCATAGGCCTAAATTTAAAAAATCAAAAACAAAAAACAAAATGATTTATCAAATCGGGCCGTAGTTTTTAAAAACGTATTTTGCTTTTTGAAGGTGGCTAAGAATTCAAATGTTTCTTTAACAAAGATGAAACTCATTGTAAAGGAAATATTAAAAAACAAGCACAATTTTCAAAAACAAAAAATTAAATGATTATCAAACATGGCCTTATAAATTTGTGACTTCTTATTTTTAAAAATTGTGTTTGCTTTCTCACAATTAGTCTAGCTTAATTTTCAAAAACCAAAAATCGATAAAGCGAAATGAATTATCAAAGAATTGAAGATGACATATATAGTTGTTTATGTGTTGTGTTGTGGATGCAGCCTGTTTTGGTAACGCATTAATTTTTTGGCTGATTGCTTCCTTTACGCCCTGCATTTGCCTTTACACTTGTTCTTACCGATCTCGATTGAGGGCAAAATACCAACTCCAAGAAACACCATGCAATGATTGTTGTGTTCACTTTTGGTGTTGGAGTTGTGCAATGTGTCAAGAGTATCGTGAGCTCAAGAGCCGCGGTTTTGACATGCATATTGGTATTTTCTCTCTTCTCTCTTTTACATACATCTCTTTTTTATAATATATATATATATATATATATATATATATATATATATGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTATGATATCGATCGAGTGTTATGCTCAGGTTGGCAAGAAAATGTGCAAAGACGAAACAGGGGAATAGAGATCCCGCCTATAGTCGAGGGACAAATGAACCGTTGAAGTTAAAAGGCAAGCCATCAGACTAATGATTGTTTTTTTTTTTCCTTAAGTTTTTCCTTGAATTCAATAATGTGTGGAAGTAGAAGGATTCTTAAGTTTATGCTCCTTTTTACCTTTTCATAAATCTTTTTATTGAGGAGAGAAATGACAATTGCACTTTCAAATGAGAATAAGATAAGGTTTATTGATGAATCAATTGAAGAACTGACCAGAAATAATTAGAAAATTGCATTGATGTTAGTGTAACAATGATGTTGTTGCTTCATGGATTATGAATTCAGATTTAGGGAAAATAGCTGCAAGCTTGGTTTATACTGATTCAGCAGAGGATATTTGGGAGAACTCGACCATTTTTAGCAGATTAATTGACCACTGATAGCAAATAAAATTGTAACCATATTTGAGTTATGAAGCCCCAC

mRNA sequence

CAGTGTTAAATTTTTTGGTTGTATTTTTTTAAAGATAAAAAAGTTATGGCCAGCGCGGGCGGTATTCCGGTGAACTCGGCAAATGGGTCCCCGTGGTCCAGCGGCCTCTGTGATTGCTTCTCCGACATGGGATCATGTTGTTGTACGATATGGTGTCCATGTGTGCCTTTTGGGCAAGCCTCAGAGATTATAGATGAAGGATCAACTTCCTGTTTTGGTAACGCATTAATTTTTTGGCTGATTGCTTCCTTTACGCCCTGCATTTGCCTTTACACTTGTTCTTACCGATCTCGATTGAGGGCAAAATACCAACTCCAAGAAACACCATGCAATGATTGTTGTGTTCACTTTTGGTGTTGGAGTTGTGCAATGTGTCAAGAGTATCGTGAGCTCAAGAGCCGCGGTTTTGACATGCATATTGGTTGGCAAGAAAATGTGCAAAGACGAAACAGGGGAATAGAGATCCCGCCTATAGTCGAGGGACAAATGAACCGTTGAAGTTAAAAGATTTAGGGAAAATAGCTGCAAGCTTGGTTTATACTGATTCAGCAGAGGATATTTGGGAGAACTCGACCATTTTTAGCAGATTAATTGACCACTGATAGCAAATAAAATTGTAACCATATTTGAGTTATGAAGCCCCAC

Coding sequence (CDS)

ATGGCCAGCGCGGGCGGTATTCCGGTGAACTCGGCAAATGGGTCCCCGTGGTCCAGCGGCCTCTGTGATTGCTTCTCCGACATGGGATCATGTTGTTGTACGATATGGTGTCCATGTGTGCCTTTTGGGCAAGCCTCAGAGATTATAGATGAAGGATCAACTTCCTGTTTTGGTAACGCATTAATTTTTTGGCTGATTGCTTCCTTTACGCCCTGCATTTGCCTTTACACTTGTTCTTACCGATCTCGATTGAGGGCAAAATACCAACTCCAAGAAACACCATGCAATGATTGTTGTGTTCACTTTTGGTGTTGGAGTTGTGCAATGTGTCAAGAGTATCGTGAGCTCAAGAGCCGCGGTTTTGACATGCATATTGGTTGGCAAGAAAATGTGCAAAGACGAAACAGGGGAATAGAGATCCCGCCTATAGTCGAGGGACAAATGAACCGTTGA

Protein sequence

MASAGGIPVNSANGSPWSSGLCDCFSDMGSCCCTIWCPCVPFGQASEIIDEGSTSCFGNALIFWLIASFTPCICLYTCSYRSRLRAKYQLQETPCNDCCVHFWCWSCAMCQEYRELKSRGFDMHIGWQENVQRRNRGIEIPPIVEGQMNR

Homology

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BLAST of Lsi04G011140 vs. Swiss-Prot
Match: CNR2_MAIZE (Cell number regulator 2 OS=Zea mays GN=CNR2 PE=2 SV=1)

HSP 1 Score: 167.2 bits (422), Expect = 1.4e-40
Identity = 72/135 (53.33%), Postives = 95/135 (70.37%), Query Frame = 1


Query: 17  WSSGLCDCFSDMGSCCCTIWCPCVPFGQASEIIDEGSTSCFGNALIFWLIASFTPCICLY 76
           WS+GLC+CF D  +CC T  CPC+ FGQ +EIID GSTSC  +  ++ L+   T C C+Y
Sbjct: 47  WSTGLCNCFDDCHNCCVTCVCPCITFGQTAEIIDRGSTSCGTSGALYALVMLLTGCQCVY 106

Query: 77  TCSYRSRLRAKYQLQETPCNDCCVHFWCWSCAMCQEYRELKSRGFDMHIGWQENVQRRNR 136
           +C YR+++RA+Y LQ +PC+DCCVH  C  CA+CQEYRELK RGFDM IGW  N++R+ R
Sbjct: 107 SCFYRAKMRAQYGLQVSPCSDCCVHCCCQCCALCQEYRELKKRGFDMSIGWHANMERQGR 166

Query: 137 -GIEIPPIVEGQMNR 151
               +PP +   M R
Sbjct: 167 AAAAVPPHMHPGMTR 181

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BLAST of Lsi04G011140 vs. Swiss-Prot
Match: CNR9_MAIZE (Cell number regulator 9 OS=Zea mays GN=CNR9 PE=2 SV=1)

HSP 1 Score: 157.9 bits (398), Expect = 8.6e-38
Identity = 75/151 (49.67%), Postives = 96/151 (63.58%), Query Frame = 1


Query: 1   MASAGGIPVNSANGSPWSSGLCDCFSDMGSCCCTIWCPCVPFGQASEIIDEGSTSCFGNA 60
           ++S G + V    G  WSSGLC C  D G CC T WCPC+ FG+ +EI+D G+TSC    
Sbjct: 26  ISSPGAVAVGPVVGK-WSSGLCACSDDCGLCCLTCWCPCITFGRIAEIVDRGATSCGVAG 85

Query: 61  LIFWLIASFTPCICLYTCSYRSRLRAKYQLQETPCNDCCVHFWCWSCAMCQEYRELKSRG 120
            I+ L+A FT C  +Y+C+YRSR+RA+  L E  C DCCVHF C  CA+ Q+YRELK+RG
Sbjct: 86  TIYTLLACFTGCHWIYSCTYRSRMRAQLGLPEACCCDCCVHFCCEPCALSQQYRELKARG 145

Query: 121 FDMHIGWQENVQRRNRGIEI-PPIVEGQMNR 151
           FD  +GW  N Q+      + PP  EG M R
Sbjct: 146 FDPDLGWDVNAQKAAAAAAMYPPPAEGMMIR 175

[Close]

BLAST of Lsi04G011140 vs. Swiss-Prot
Match: CNR10_MAIZE (Cell number regulator 10 OS=Zea mays GN=CNR10 PE=2 SV=1)

HSP 1 Score: 156.8 bits (395), Expect = 1.9e-37
Identity = 71/146 (48.63%), Postives = 94/146 (64.38%), Query Frame = 1


Query: 2   ASAGGIPVNS-ANGSPWSSGLCDCFSDMGSCCCTIWCPCVPFGQASEIIDEGSTSCFGNA 61
           A   G PV   A  S WSSGL DCF D G CC T WCPC+ FG+ +EI+D G+TSC    
Sbjct: 15  APVTGFPVGGPAASSQWSSGLLDCFDDCGLCCLTCWCPCITFGRVAEIVDRGATSCGTAG 74

Query: 62  LIFWLIASFTPCICLYTCSYRSRLRAKYQLQETPCNDCCVHFWCWSCAMCQEYRELKSRG 121
            ++ ++A FT C  +Y+C+YR+++RA+  L ETPC DC VHF C  CA+CQ+Y+ELK+RG
Sbjct: 75  ALYAVLAYFTGCQWIYSCTYRAKMRAQLGLPETPCCDCLVHFCCEPCALCQQYKELKARG 134

Query: 122 FDMHIGWQENVQRRNRGIEIPPIVEG 147
           FD  +GW  N         +PP  +G
Sbjct: 135 FDPVLGWDRNATM------LPPSAQG 154

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BLAST of Lsi04G011140 vs. Swiss-Prot
Match: PCR2_ARATH (Protein PLANT CADMIUM RESISTANCE 2 OS=Arabidopsis thaliana GN=PCR2 PE=1 SV=1)

HSP 1 Score: 156.8 bits (395), Expect = 1.9e-37
Identity = 67/137 (48.91%), Postives = 92/137 (67.15%), Query Frame = 1


Query: 17  WSSGLCDCFSDMGSCCCTIWCPCVPFGQASEIIDEGSTSCFGNALIFWLIASFTPCICLY 76
           WS+G CDCFSD  +CC T WCPC+ FGQ +EI+D GSTSC     ++ LIA  T C C+Y
Sbjct: 16  WSTGFCDCFSDCKNCCITFWCPCITFGQVAEIVDRGSTSCGTAGALYALIAVVTGCACIY 75

Query: 77  TCSYRSRLRAKYQLQETPCNDCCVHFWCWSCAMCQEYRELKSRGFDMHIGWQENVQRRNR 136
           +C YR ++RA+Y ++   C DC  HF C  C++ Q+YRELK RG+DM +GW  NV+R+  
Sbjct: 76  SCFYRGKMRAQYNIKGDDCTDCLKHFCCELCSLTQQYRELKHRGYDMSLGWAGNVERQQN 135

Query: 137 --GIEI-PPIVEGQMNR 151
             G+ +  P+ +G M R
Sbjct: 136 QGGVAMGAPVFQGGMTR 152

[Close]

BLAST of Lsi04G011140 vs. Swiss-Prot
Match: CNR7_MAIZE (Cell number regulator 7 OS=Zea mays GN=CNR7 PE=2 SV=1)

HSP 1 Score: 155.2 bits (391), Expect = 5.6e-37
Identity = 73/153 (47.71%), Postives = 97/153 (63.40%), Query Frame = 1


Query: 6   GIPVNSAN----GSPWSSGLCDCFSDMGSCCCTIWCPCVPFGQASEIIDEGSTSCFGNAL 65
           GIP++S       S WSSGLC CF D G CC T WCPCV FG+ +E++D G+TSC     
Sbjct: 25  GIPISSPGPAVAASQWSSGLCACFDDCGLCCMTCWCPCVTFGRIAEVVDRGATSCAAAGA 84

Query: 66  IFWLIASFT--PCICLYTCSYRSRLRAKYQLQETPCNDCCVHFWCWSCAMCQEYRELKSR 125
           I+ L+A FT   C  +Y+C+YRS++RA+  L +  C DCCVHF C  CA+CQ+YREL++R
Sbjct: 85  IYTLLACFTGFQCHWIYSCTYRSKMRAQLGLPDVGCCDCCVHFCCEPCALCQQYRELRAR 144

Query: 126 GFDMHIGWQENVQR---RNRGIEI---PPIVEG 147
           G D  +GW  N Q+    N G  +   PP  +G
Sbjct: 145 GLDPALGWDVNAQKAANNNAGAGMTMYPPTAQG 177

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BLAST of Lsi04G011140 vs. TrEMBL
Match: A0A0A0KIS6_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_5G027940 PE=4 SV=1)

HSP 1 Score: 282.0 bits (720), Expect = 4.4e-73
Identity = 125/150 (83.33%), Postives = 132/150 (88.00%), Query Frame = 1


Query: 1   MASAGGIPVNSANGSPWSSGLCDCFSDMGSCCCTIWCPCVPFGQASEIIDEGSTSCFGNA 60
           M S  G   NS N SPWSSGLCDCFSDMGSCCCT WCPCVPFGQASEIIDEGSTSCFGN 
Sbjct: 1   MGSDDGFLNNSGNESPWSSGLCDCFSDMGSCCCTAWCPCVPFGQASEIIDEGSTSCFGNG 60

Query: 61  LIFWLIASFTPCICLYTCSYRSRLRAKYQLQETPCNDCCVHFWCWSCAMCQEYRELKSRG 120
           LIF LIA+FTPCICLYTCSYRSRLR KY L+ETPCNDCCVH WCWSCAMCQEYREL++RG
Sbjct: 61  LIFCLIATFTPCICLYTCSYRSRLRKKYNLKETPCNDCCVHCWCWSCAMCQEYRELQNRG 120

Query: 121 FDMHIGWQENVQRRNRGIEIPPIVEGQMNR 151
           F+MHIGWQEN+QR N+GIEIPP V GQM R
Sbjct: 121 FNMHIGWQENMQRGNKGIEIPPTVPGQMKR 150

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BLAST of Lsi04G011140 vs. TrEMBL
Match: A0A022QN19_ERYGU (Uncharacterized protein (Fragment) OS=Erythranthe guttata GN=MIMGU_mgv1a024272mg PE=4 SV=1)

HSP 1 Score: 196.1 bits (497), Expect = 3.2e-47
Identity = 83/135 (61.48%), Postives = 104/135 (77.04%), Query Frame = 1


Query: 16  PWSSGLCDCFSDMGSCCCTIWCPCVPFGQASEIIDEGSTSCFGNALIFWLIASFTPCICL 75
           PWS+GLC CFSD  +CC T WCPC+ FGQ +EI+D+GS+SC  N  ++ LIA  T C C 
Sbjct: 14  PWSTGLCGCFSDCRNCCITCWCPCITFGQIAEIVDKGSSSCGQNGALYTLIACVTGCPCF 73

Query: 76  YTCSYRSRLRAKYQLQETPCNDCCVHFWCWSCAMCQEYRELKSRGFDMHIGWQENVQRRN 135
           Y+C YRS+LR +Y L E+ C DCCVH +C SCA+CQEYRELK+RGFDM IGW  NV+R+N
Sbjct: 74  YSCFYRSKLRQQYLLHESACGDCCVHCFCESCALCQEYRELKNRGFDMSIGWHGNVERQN 133

Query: 136 RGIEIPPIVEGQMNR 151
           RG+ + PIVEG M+R
Sbjct: 134 RGVAMAPIVEGGMSR 148

[Close]

BLAST of Lsi04G011140 vs. TrEMBL
Match: F6HFF1_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VIT_01s0011g05440 PE=4 SV=1)

HSP 1 Score: 194.9 bits (494), Expect = 7.0e-47
Identity = 82/155 (52.90%), Postives = 113/155 (72.90%), Query Frame = 1


Query: 2   ASAGGIPVNSANGS------PWSSGLCDCFSDMGSCCCTIWCPCVPFGQASEIIDEGSTS 61
           A A GIP++S  G       PWS+GLCDCFSD+ +CC T WCPC+ FGQ +EI+D+G+ S
Sbjct: 26  AMATGIPISSTGGLQPGTEVPWSTGLCDCFSDVTNCCITCWCPCITFGQIAEIVDKGTVS 85

Query: 62  CFGNALIFWLIASFTPCICLYTCSYRSRLRAKYQLQETPCNDCCVHFWCWSCAMCQEYRE 121
           CF +  I+  +  FT C CL++CSYR++LR +  L+E+PC DC VHF C +C++CQEYRE
Sbjct: 86  CFASGAIYAALTYFTTCACLFSCSYRTKLRKQLMLKESPCGDCLVHFCCETCSLCQEYRE 145

Query: 122 LKSRGFDMHIGWQENVQRRNRGIEIPPIVEGQMNR 151
           L  RGFDM +GW+ N++R+NRG+ + P+VE  M R
Sbjct: 146 LTHRGFDMSLGWEGNMERQNRGVAMAPVVERGMQR 180

[Close]

BLAST of Lsi04G011140 vs. TrEMBL
Match: F6HFF2_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VIT_01s0011g05430 PE=4 SV=1)

HSP 1 Score: 193.4 bits (490), Expect = 2.0e-46
Identity = 82/155 (52.90%), Postives = 112/155 (72.26%), Query Frame = 1


Query: 2   ASAGGIPVNSANGS------PWSSGLCDCFSDMGSCCCTIWCPCVPFGQASEIIDEGSTS 61
           A A GIP++S          PWS+GLCDCFSD+ +CC T WCPC+ FGQ +EI+D+G+ S
Sbjct: 26  AMATGIPISSTGSLQPGTEVPWSTGLCDCFSDVTNCCITCWCPCITFGQIAEIVDKGTVS 85

Query: 62  CFGNALIFWLIASFTPCICLYTCSYRSRLRAKYQLQETPCNDCCVHFWCWSCAMCQEYRE 121
           CF +  I+  +A FT C CL++CSYR++LR +  L+E+PC DC VHF C  C++CQEYRE
Sbjct: 86  CFASGAIYAALAYFTTCACLFSCSYRTKLRKQLMLKESPCEDCLVHFCCEPCSLCQEYRE 145

Query: 122 LKSRGFDMHIGWQENVQRRNRGIEIPPIVEGQMNR 151
           L  RGFDM +GW+ N++R+NRG+ + P+VE  M R
Sbjct: 146 LTRRGFDMSLGWEGNMERQNRGVAMAPVVERGMQR 180

[Close]

BLAST of Lsi04G011140 vs. TrEMBL
Match: B9SP59_RICCO (Putative uncharacterized protein OS=Ricinus communis GN=RCOM_0628750 PE=4 SV=1)

HSP 1 Score: 192.6 bits (488), Expect = 3.5e-46
Identity = 81/144 (56.25%), Postives = 106/144 (73.61%), Query Frame = 1


Query: 7   IPVNSANGSPWSSGLCDCFSDMGSCCCTIWCPCVPFGQASEIIDEGSTSCFGNALIFWLI 66
           +P NS    PWS+GLCDCFSD  +CC T WCPC+ FGQ +EI+++G+TSC     I+ ++
Sbjct: 4   LPNNSKAQVPWSTGLCDCFSDRRTCCITFWCPCITFGQIAEIVEKGTTSCATTGAIYAIL 63

Query: 67  ASFTPCICLYTCSYRSRLRAKYQLQETPCNDCCVHFWCWSCAMCQEYRELKSRGFDMHIG 126
           A FT C C+Y+C YRS+LR +Y L E+PCNDC VH  C +CA+CQEYRELKSRGFDM IG
Sbjct: 64  ACFTGCGCIYSCMYRSKLRHQYMLPESPCNDCLVHCCCEACALCQEYRELKSRGFDMSIG 123

Query: 127 WQENVQRRNRGIEIPPIVEGQMNR 151
           WQ NV+R+  G+ + P+ +  M R
Sbjct: 124 WQGNVERQKGGVAMAPVFQAGMTR 147

[Close]

BLAST of Lsi04G011140 vs. TAIR10
Match: AT1G14870.1 (AT1G14870.1 PLANT CADMIUM RESISTANCE 2)

HSP 1 Score: 156.8 bits (395), Expect = 1.1e-38
Identity = 67/137 (48.91%), Postives = 92/137 (67.15%), Query Frame = 1


Query: 17  WSSGLCDCFSDMGSCCCTIWCPCVPFGQASEIIDEGSTSCFGNALIFWLIASFTPCICLY 76
           WS+G CDCFSD  +CC T WCPC+ FGQ +EI+D GSTSC     ++ LIA  T C C+Y
Sbjct: 16  WSTGFCDCFSDCKNCCITFWCPCITFGQVAEIVDRGSTSCGTAGALYALIAVVTGCACIY 75

Query: 77  TCSYRSRLRAKYQLQETPCNDCCVHFWCWSCAMCQEYRELKSRGFDMHIGWQENVQRRNR 136
           +C YR ++RA+Y ++   C DC  HF C  C++ Q+YRELK RG+DM +GW  NV+R+  
Sbjct: 76  SCFYRGKMRAQYNIKGDDCTDCLKHFCCELCSLTQQYRELKHRGYDMSLGWAGNVERQQN 135

Query: 137 --GIEI-PPIVEGQMNR 151
             G+ +  P+ +G M R
Sbjct: 136 QGGVAMGAPVFQGGMTR 152

[Close]

BLAST of Lsi04G011140 vs. TAIR10
Match: AT5G35525.1 (AT5G35525.1 PLAC8 family protein)

HSP 1 Score: 149.4 bits (376), Expect = 1.7e-36
Identity = 66/137 (48.18%), Postives = 92/137 (67.15%), Query Frame = 1


Query: 17  WSSGLCDCFSDMGSCCCTIWCPCVPFGQASEIIDEGSTSCFGNALIFWLIASFTPCICLY 76
           WS+G CDCFSD  +CC T  CPC+ FGQ ++I+D G+TSC     ++ L+A+ T C CLY
Sbjct: 16  WSTGFCDCFSDCQNCCITWLCPCITFGQVADIVDRGNTSCGTAGALYVLLAAITGCGCLY 75

Query: 77  TCSYRSRLRAKYQLQETPCNDCCVHFWCWSCAMCQEYRELKSRGFDMHIGWQENVQRRNR 136
           +C YR ++RA+Y ++   C DC  HF C  CA+ QEYRELK RGFDM +GW  NV+++  
Sbjct: 76  SCIYRGKIRAQYNIRGDGCTDCLKHFCCELCALTQEYRELKHRGFDMSLGWAGNVEKQQN 135

Query: 137 --GIEI-PPIVEGQMNR 151
             G+ +  P  +G M+R
Sbjct: 136 QGGVAMGAPAFQGGMSR 152

[Close]

BLAST of Lsi04G011140 vs. TAIR10
Match: AT1G68610.1 (AT1G68610.1 PLANT CADMIUM RESISTANCE 11)

HSP 1 Score: 141.4 bits (355), Expect = 4.7e-34
Identity = 62/123 (50.41%), Postives = 86/123 (69.92%), Query Frame = 1


Query: 17  WSSGLCDCFSDMGSCCCTIWCPCVPFGQASEIIDEGSTSCFGNALIFWLIASFTPC--IC 76
           WS+ LC+C+ D+ SCC T WCPCV FG+ +E++D GSTSC  +  ++ +I   T      
Sbjct: 19  WSTDLCECWMDINSCCLTCWCPCVAFGRIAEVVDRGSTSCGVSGAMYMIIFMLTGYGGSS 78

Query: 77  LYTCSYRSRLRAKYQLQETPCNDCCVHFWCWSCAMCQEYRELK-SRGFDMHIGWQENVQR 136
           LY+C YR++LRA+Y L+E PC DCCVHF C  CA+CQEYR+L+ +R  D+ IGW  N++R
Sbjct: 79  LYSCFYRTKLRAQYNLKERPCCDCCVHFCCEPCALCQEYRQLQHNRDLDLVIGWHGNMER 138

[Close]

BLAST of Lsi04G011140 vs. TAIR10
Match: AT1G14880.1 (AT1G14880.1 PLANT CADMIUM RESISTANCE 1)

HSP 1 Score: 139.4 bits (350), Expect = 1.8e-33
Identity = 62/137 (45.26%), Postives = 85/137 (62.04%), Query Frame = 1


Query: 17  WSSGLCDCFSDMGSCCCTIWCPCVPFGQASEIIDEGSTSCFGNALIFWLIASFTPCICLY 76
           WS+G CDCFSD  +CC T+ CPC+ FGQ +EI+D GS SC     ++ LI   T C  +Y
Sbjct: 15  WSTGFCDCFSDCRNCCITLCCPCITFGQVAEIVDRGSKSCCAAGALYMLIDLITSCGRMY 74

Query: 77  TCSYRSRLRAKYQLQETPCNDCCVHFWCWSCAMCQEYRELKSRGFDMHIGWQENVQRRNR 136
            C Y  ++RA+Y ++   C DC  HF C  CA+ Q+YRELK RGFDM +GW  N +++  
Sbjct: 75  ACFYSGKMRAQYNIKGDGCTDCLKHFCCNLCALTQQYRELKHRGFDMSLGWAGNAEKQQN 134

Query: 137 --GIEI-PPIVEGQMNR 151
             G+ +  P  +G M R
Sbjct: 135 QGGVAMGAPAFQGGMTR 151

[Close]

BLAST of Lsi04G011140 vs. TAIR10
Match: AT3G18470.1 (AT3G18470.1 PLAC8 family protein)

HSP 1 Score: 129.8 bits (325), Expect = 1.4e-30
Identity = 55/117 (47.01%), Postives = 78/117 (66.67%), Query Frame = 1


Query: 17  WSSGLCDCFSDMGSCCCTIWCPCVPFGQASEIIDEGSTSCFGNALIFWLIASFTPCICLY 76
           W+SGL  C  D  + C T +CPCV FG+ ++I DEG T C    + + LI       CL+
Sbjct: 5   WTSGLFSCMEDSETACLTCFCPCVTFGRIADISDEGRTGCGRCGVFYGLICCVVGLPCLF 64

Query: 77  TCSYRSRLRAKYQLQETPCNDCCVHFWCWSCAMCQEYRELKSRGFDMHIGWQENVQR 134
           +C+YR+++R+K+ L E+P +DC  HF+C  CA+CQE+RELK+RG D  IGW  N+QR
Sbjct: 65  SCTYRTKIRSKFGLPESPTSDCVTHFFCECCALCQEHRELKTRGLDPSIGWSGNMQR 121

[Close]

BLAST of Lsi04G011140 vs. NCBI nr
Match: gi|659102930|ref|XP_008452392.1| (PREDICTED: cell number regulator 2-like [Cucumis melo])

HSP 1 Score: 304.3 bits (778), Expect = 1.2e-79
Identity = 135/150 (90.00%), Postives = 141/150 (94.00%), Query Frame = 1


Query: 1   MASAGGIPVNSANGSPWSSGLCDCFSDMGSCCCTIWCPCVPFGQASEIIDEGSTSCFGNA 60
           MASAGGI  NSANGSPWSSGLCDCFSD+GSCCCTIWCPCVPFGQASEIIDEGSTSCFGNA
Sbjct: 1   MASAGGIAANSANGSPWSSGLCDCFSDIGSCCCTIWCPCVPFGQASEIIDEGSTSCFGNA 60

Query: 61  LIFWLIASFTPCICLYTCSYRSRLRAKYQLQETPCNDCCVHFWCWSCAMCQEYRELKSRG 120
           LIF LIASFTPCICLYTCSYRSRLR KY LQETPCNDCCVHFWCWSCA+CQE+RELK+RG
Sbjct: 61  LIFLLIASFTPCICLYTCSYRSRLRGKYNLQETPCNDCCVHFWCWSCALCQEHRELKNRG 120

Query: 121 FDMHIGWQENVQRRNRGIEIPPIVEGQMNR 151
           F+MHIGWQENVQRRNR  +IPP VEGQM R
Sbjct: 121 FNMHIGWQENVQRRNRETQIPPTVEGQMKR 150

[Close]

BLAST of Lsi04G011140 vs. NCBI nr
Match: gi|659129456|ref|XP_008464696.1| (PREDICTED: cell number regulator 2-like [Cucumis melo])

HSP 1 Score: 288.9 bits (738), Expect = 5.1e-75
Identity = 129/150 (86.00%), Postives = 134/150 (89.33%), Query Frame = 1


Query: 1   MASAGGIPVNSANGSPWSSGLCDCFSDMGSCCCTIWCPCVPFGQASEIIDEGSTSCFGNA 60
           M S  G   NS N SPWSSGLCDCFSDMGSCCCT WCPCVPFGQASEIIDEGSTSCFGNA
Sbjct: 1   MGSDDGFLTNSDNESPWSSGLCDCFSDMGSCCCTTWCPCVPFGQASEIIDEGSTSCFGNA 60

Query: 61  LIFWLIASFTPCICLYTCSYRSRLRAKYQLQETPCNDCCVHFWCWSCAMCQEYRELKSRG 120
           LIF LIASFTPCICLYTCSYRSRLR KY L+ETPCNDCCVH WCWSCAMCQEYRELK+RG
Sbjct: 61  LIFCLIASFTPCICLYTCSYRSRLRRKYNLKETPCNDCCVHCWCWSCAMCQEYRELKNRG 120

Query: 121 FDMHIGWQENVQRRNRGIEIPPIVEGQMNR 151
           F+MHIGWQENVQR+N+GIEIPP V GQM R
Sbjct: 121 FNMHIGWQENVQRQNKGIEIPPTVPGQMKR 150

[Close]

BLAST of Lsi04G011140 vs. NCBI nr
Match: gi|449449034|ref|XP_004142270.1| (PREDICTED: cell number regulator 2-like [Cucumis sativus])

HSP 1 Score: 282.0 bits (720), Expect = 6.3e-73
Identity = 125/150 (83.33%), Postives = 132/150 (88.00%), Query Frame = 1


Query: 1   MASAGGIPVNSANGSPWSSGLCDCFSDMGSCCCTIWCPCVPFGQASEIIDEGSTSCFGNA 60
           M S  G   NS N SPWSSGLCDCFSDMGSCCCT WCPCVPFGQASEIIDEGSTSCFGN 
Sbjct: 1   MGSDDGFLNNSGNESPWSSGLCDCFSDMGSCCCTAWCPCVPFGQASEIIDEGSTSCFGNG 60

Query: 61  LIFWLIASFTPCICLYTCSYRSRLRAKYQLQETPCNDCCVHFWCWSCAMCQEYRELKSRG 120
           LIF LIA+FTPCICLYTCSYRSRLR KY L+ETPCNDCCVH WCWSCAMCQEYREL++RG
Sbjct: 61  LIFCLIATFTPCICLYTCSYRSRLRKKYNLKETPCNDCCVHCWCWSCAMCQEYRELQNRG 120

Query: 121 FDMHIGWQENVQRRNRGIEIPPIVEGQMNR 151
           F+MHIGWQEN+QR N+GIEIPP V GQM R
Sbjct: 121 FNMHIGWQENMQRGNKGIEIPPTVPGQMKR 150

[Close]

BLAST of Lsi04G011140 vs. NCBI nr
Match: gi|747049114|ref|XP_011070591.1| (PREDICTED: protein PLANT CADMIUM RESISTANCE 2-like [Sesamum indicum])

HSP 1 Score: 196.8 bits (499), Expect = 2.7e-47
Identity = 80/135 (59.26%), Postives = 106/135 (78.52%), Query Frame = 1


Query: 16  PWSSGLCDCFSDMGSCCCTIWCPCVPFGQASEIIDEGSTSCFGNALIFWLIASFTPCICL 75
           PWS+GLCDCFSD+ +CC T WCPC+ FGQ SEI+D+GS+SC  N  ++ ++A  T C C 
Sbjct: 55  PWSTGLCDCFSDVRNCCITCWCPCITFGQISEIVDKGSSSCVQNGALYTVVACVTGCPCF 114

Query: 76  YTCSYRSRLRAKYQLQETPCNDCCVHFWCWSCAMCQEYRELKSRGFDMHIGWQENVQRRN 135
           Y+C YRS++R +Y L E+PC DC VH +C SCA+CQEYRELK+RGFDM IGW  NV+++N
Sbjct: 115 YSCFYRSKMRQQYLLHESPCGDCLVHCFCESCALCQEYRELKNRGFDMSIGWNGNVEKQN 174

Query: 136 RGIEIPPIVEGQMNR 151
           RG+ + P+VEG M+R
Sbjct: 175 RGVAMAPVVEGGMSR 189

[Close]

BLAST of Lsi04G011140 vs. NCBI nr
Match: gi|604318610|gb|EYU30102.1| (hypothetical protein MIMGU_mgv1a024272mg, partial [Erythranthe guttata])

HSP 1 Score: 196.1 bits (497), Expect = 4.5e-47
Identity = 83/135 (61.48%), Postives = 104/135 (77.04%), Query Frame = 1


Query: 16  PWSSGLCDCFSDMGSCCCTIWCPCVPFGQASEIIDEGSTSCFGNALIFWLIASFTPCICL 75
           PWS+GLC CFSD  +CC T WCPC+ FGQ +EI+D+GS+SC  N  ++ LIA  T C C 
Sbjct: 14  PWSTGLCGCFSDCRNCCITCWCPCITFGQIAEIVDKGSSSCGQNGALYTLIACVTGCPCF 73

Query: 76  YTCSYRSRLRAKYQLQETPCNDCCVHFWCWSCAMCQEYRELKSRGFDMHIGWQENVQRRN 135
           Y+C YRS+LR +Y L E+ C DCCVH +C SCA+CQEYRELK+RGFDM IGW  NV+R+N
Sbjct: 74  YSCFYRSKLRQQYLLHESACGDCCVHCFCESCALCQEYRELKNRGFDMSIGWHGNVERQN 133

Query: 136 RGIEIPPIVEGQMNR 151
           RG+ + PIVEG M+R
Sbjct: 134 RGVAMAPIVEGGMSR 148

The following BLAST results are available for this feature:

BLAST of Lsi04G011140 vs. Swiss-Prot


Match Name	E-value	Identity	Description
CNR2_MAIZE	1.4e-40	53.33	Cell number regulator 2 OS=Zea mays GN=CNR2 PE=2 SV=1	[more]
CNR9_MAIZE	8.6e-38	49.67	Cell number regulator 9 OS=Zea mays GN=CNR9 PE=2 SV=1	[more]
CNR10_MAIZE	1.9e-37	48.63	Cell number regulator 10 OS=Zea mays GN=CNR10 PE=2 SV=1	[more]
PCR2_ARATH	1.9e-37	48.91	Protein PLANT CADMIUM RESISTANCE 2 OS=Arabidopsis thaliana GN=PCR2 PE=1 SV=1	[more]
CNR7_MAIZE	5.6e-37	47.71	Cell number regulator 7 OS=Zea mays GN=CNR7 PE=2 SV=1	[more]

BLAST of Lsi04G011140 vs. TrEMBL


Match Name	E-value	Identity	Description
A0A0A0KIS6_CUCSA	4.4e-73	83.33	Uncharacterized protein OS=Cucumis sativus GN=Csa_5G027940 PE=4 SV=1	[more]
A0A022QN19_ERYGU	3.2e-47	61.48	Uncharacterized protein (Fragment) OS=Erythranthe guttata GN=MIMGU_mgv1a024272mg...	[more]
F6HFF1_VITVI	7.0e-47	52.90	Putative uncharacterized protein OS=Vitis vinifera GN=VIT_01s0011g05440 PE=4 SV=...	[more]
F6HFF2_VITVI	2.0e-46	52.90	Putative uncharacterized protein OS=Vitis vinifera GN=VIT_01s0011g05430 PE=4 SV=...	[more]
B9SP59_RICCO	3.5e-46	56.25	Putative uncharacterized protein OS=Ricinus communis GN=RCOM_0628750 PE=4 SV=1	[more]

BLAST of Lsi04G011140 vs. TAIR10


Match Name	E-value	Identity	Description
AT1G14870.1	1.1e-38	48.91	PLANT CADMIUM RESISTANCE 2	[more]
AT5G35525.1	1.7e-36	48.18	PLAC8 family protein	[more]
AT1G68610.1	4.7e-34	50.41	PLANT CADMIUM RESISTANCE 11	[more]
AT1G14880.1	1.8e-33	45.26	PLANT CADMIUM RESISTANCE 1	[more]
AT3G18470.1	1.4e-30	47.01	PLAC8 family protein	[more]

BLAST of Lsi04G011140 vs. NCBI nr


Match Name	E-value	Identity	Description
gi\|659102930\|ref\|XP_008452392.1\|	1.2e-79	90.00	PREDICTED: cell number regulator 2-like [Cucumis melo]	[more]
gi\|659129456\|ref\|XP_008464696.1\|	5.1e-75	86.00	PREDICTED: cell number regulator 2-like [Cucumis melo]	[more]
gi\|449449034\|ref\|XP_004142270.1\|	6.3e-73	83.33	PREDICTED: cell number regulator 2-like [Cucumis sativus]	[more]
gi\|747049114\|ref\|XP_011070591.1\|	2.7e-47	59.26	PREDICTED: protein PLANT CADMIUM RESISTANCE 2-like [Sesamum indicum]	[more]
gi\|604318610\|gb\|EYU30102.1\|	4.5e-47	61.48	hypothetical protein MIMGU_mgv1a024272mg, partial [Erythranthe guttata]	[more]

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **INTERPRO**
Term	Definition
IPR006461	PLAC_motif_containing

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0008150	biological_process
cellular_component	GO:0016021	integral component of membrane
cellular_component	GO:0005575	cellular_component
molecular_function	GO:0003674	molecular_function

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Lsi04G011140.1	Lsi04G011140.1	mRNA

InterPro

Analysis Name: InterPro Annotations of Lagenaria siceraria
Date Performed: 2017-09-18


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR006461	PLAC8 motif-containing protein	PFAM	PF04749	PLAC8	coord: 17..115 score: 3.3
IPR006461	PLAC8 motif-containing protein	TIGRFAMs	TIGR01571	TIGR01571	coord: 16..117 score: 1.4
None	No IPR available	PANTHER	PTHR15907	FAMILY NOT NAMED	coord: 15..148 score: 2.3
None	No IPR available	PANTHER	PTHR15907:SF47	PROTEIN PLANT CADMIUM RESISTANCE 11-RELATED	coord: 15..148 score: 2.3

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
Lsi04G011140	CmaCh04G000670	Cucurbita maxima (Rimu)	cmalsiB680
Lsi04G011140	CmoCh04G000610	Cucurbita moschata (Rifu)	cmolsiB673
Lsi04G011140	MELO3C016634	Melon (DHL92) v3.5.1	lsimeB320
Lsi04G011140	MELO3C032345.2	Melon (DHL92) v3.6.1	lsimedB337
Lsi04G011140	Bhi07G000317	Wax gourd	lsiwgoB389
Lsi04G011140	Cp4.1LG01g06200	Cucurbita pepo (Zucchini)	cpelsiB362

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:


Gene	Organism	Block
Lsi04G011140	Cucumber (Gy14) v1	cgylsiB001
Lsi04G011140	Cucurbita maxima (Rimu)	cmalsiB679
Lsi04G011140	Cucurbita moschata (Rifu)	cmolsiB672
Lsi04G011140	Cucurbita pepo (Zucchini)	cpelsiB361
Lsi04G011140	Wild cucumber (PI 183967)	cpilsiB367
Lsi04G011140	Cucumber (Chinese Long) v2	culsiB364
Lsi04G011140	Melon (DHL92) v3.5.1	lsimeB286
Lsi04G011140	Watermelon (Charleston Gray)	lsiwcgB296
Lsi04G011140	Cucumber (Gy14) v2	cgyblsiB333
Lsi04G011140	Melon (DHL92) v3.6.1	lsimedB301
Lsi04G011140	Silver-seed gourd	carlsiB159
Lsi04G011140	Silver-seed gourd	carlsiB610
Lsi04G011140	Cucumber (Chinese Long) v3	cuclsiB389
Lsi04G011140	Watermelon (97103) v2	lsiwmbB297