Lsi01G011060 (gene) Bottle gourd (USVL1VR-Ls)
The following sequences are available for this feature:
Legend: five_prime_UTRCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.TTTCTTCTTCCAAAATTCTATCCATCTTGATTGCTACCTCCTTGTGTTGTACTCACTATCTTCTCTTTTCGCTCTGAAACTCAAGAAATTCAAGGCGTATGCGTTTTTTTTTTCCTTTCTTGTTGGCTTCAATACGTTTGTCTTGCTCGATTTCGTTTCTGTTTAGTAGCTTTTAATAGTGCTTTTTGTTCTGTTGATTTGAATATTTGGTTATTTTTGTGTGGAATTTTAGTAGTTTTTTGACGCTCAGCTGCAATTTATGCCCTGCGATCCAATGACCTAAAGTATGCCTTATTACCATTATGTATTAGTATCTTGATTATGACTTATAGATCTGGGTTAGGTCGATCATAAATTTCAACCTTCGAAGTACTGATTGCGGCTTTTGAGTGCGTGATTTATATTCGATTTTTTTGTATAGAGTTCTCCTCAAGGACGCTTGGAAATTTGCTGATACCTGTGGCTGTGGTAGGTATGTTGCCAAGTTAGTACAACAGGGATTTCTATTGTTTATATCATGGCAGTGATGCAACTACTTGATTTTGTCGATACTTAATATGGTGTACATTATCATCGTCATTATGGGGCAGGAAGGATTAGAACCATAAAGAAAATCTGTACATGGAATTAGGTTTTCTGGATGAAAAAAGAAGGGAAGGGATAAAATAGCACGAACAATTTGGTAGTTTCCTGTGTAGCATCTGTCACGAATGGAACACAGTTTATATGATGACGAAGTTGCTGACTGTTAGCCGTTTCAGGTTCCGCCTTCTTAATTTTTCTTTTTGGATACATAGCGCAAGTGATTCTCCTCAGACTCCATTCAGTGCTGGAAAATTGAAACATTATGAAAACAGGCAGGCGCCCAGATAGAAGGGCAAAAAAGTTGGGGAAAAGGAGTGTGAAATCTGCTGACACGATTGGAGTTCAGAAGTCTAGAAAGATAATTTCTCAGGAGATAAAAGCTCTCGACAATGCACACATTGAAGGTTCGATAACCAATTTCTTTTGTTTCACGTTGTTTGTTCAGCACAAACCATTTCCCCCAAATTATTTGCCTCTTTTCTGGGGAACATTTTCTGTCTTAAATTGATGTTCCTGCATCATCATGTAACGATTTTGTGTGCTGTTCAAGTGTGAAAAAAAGAACTAATTTCTTTGCGTACAGTTATTTTCTTTATTTATTTTACAAGACCGTTGTTAACAAACTACATACTTTTTGATCTCGTGCAGATAACTTGAAGAATGTACAGAATTCGGTTCATCAAATTAATCCAACAGAAATGACAGAGAGGACACCTCTTATTGATCTTTATCCCACACAGATGCCCCATCCTCGCACAAAGATCAAGCTTCAACTTTTTCCGATAAATGAAAAGACCCGCATGGCATTGGAAAAGGTATTGTCACGAGCACAAAACATTGAGGATTAAGCACAGACAAGTACGATATCTGTATTTCAGTTCATATTTGAGACGTGACAAAACTATGCCTTTTATTTTTGTAGGATGGATATCATCCACATTTGGAACTGACTTTAAGGGCTCGAAAGAAAATTTCTTCGGTATTAAACCATCTTATTAGCAAGTGGGGATGTTCTAATGTAGCACGAGGGGAGCTCAGGCTTTTTCCATACAGTAAGCCATCAAGTCTTGTCAGTGGTCTAAAATGGACTCTGGAAGATCGTGACATCAGTGCTGGAGATGTCTATGCAGCTGTTGGAGGTTCAATTTTCCGCTTAAGGTGCCCAGTTTTATCATTTACCTTGGTAATGATTTATTGATTCAGTTAAGTTAAATGTGTTAATTGAAATTATTCTCCTTAAGATACGGCTGGGTCTCCACATCCACTCCAAAACTTCATTTATCCTCGAAAGGCTTGGAGAAAGGTTGCAGTAGTACCCTGCAAATCATACACGGGGAAGGCAAACAATCTGAGGAAACGATGGATGATATCAAGTCAAGCAATACGAATGGAGTGAATAACACTGCTGCACCAGAGAAGACTGTGGATTGTCCAACTAATCCAACGGTATTATATTCAAATTCCAATTTTTTGTTAAAATTTTAAATGAACACTATGACAAGAGAACAAATTAATACTGTAATTAAATTTACACGATTTTTTCCCAGTCCACATTTAAGTTCTATAAAACGAACCATTAACATTTGCGTATTGTAAGAATTATGATGCATTGATAAGGGTTATAAACTATGCTTTTGCTACACTGATGAATGATGTGAAAATAATGAAATCAAGCAAATATACAAGACACATACACTACAACCGACTCCAGCGACAAGTGTGTTTGTGTTATTATTATTTTTTTTCTTGGCAAACCAAATGATTATTTTTAAACGTCTGTCGTAGCTTGGAGCAAATATTATGATTTCTGAAATTGACGACACTGTTTGAATTAGGATAATGAGCCACCGTTGGATTCTGGTCATCAGTTGGCATCAGAATGTGGAATCCTGCAGTTAGATAGTATATCAAACATAAGCATGGGAGGCCTCCTTTCTGAAGCTTCCTTAATGGGAAAATGCAGTAGCTGGGATTCAAAGATAACAAGGGGCACTGCAAGCGTGCAGCCAGCTGAAGTAATAACTGATTCCCTTGATGCATGCATTGCTGCGGCCCAGATGAGATTTTCTGGCGTTTCAAAGCAGCCCCTTAATGATCAACATTCGTCTATTTTGGATGCCGAGCAAACTTGTGATGCATTTGCTATGAAAAGACTCGCTTCATTGAGCAAAGACACTCTTTCTCTAGATGCTAGTGCTGGAGGCACCTTCCAAGATGCCGATTCCAAGTTGTTCAAATTTCCTAAAACACCTCAGGTTTGTCTCTCTCTCTACCACAACTTCGACTGTTTTAGAGATGAAATGGTTTGACATCATATGGAGTCGATAGCTCCCTGGTTGAGTAATATTAATCAGATAGTTCCAATTTGACTGACCTTATTTATGTTTACTTACTATGAAGTAAATGAAGTATAAACTATGGATTACGAATTTTTAAAACTGGTAAAAAGATCAACCGTAAATATTTTTTGAAATCAACTCAAGGAATCCATAATACAACCATTTATGTAGGAACATGGGATAGGAAATTTGATTGATGAAGTTTAGAATTAATTTTATGGGAAAGATTAATGACTTAAATGTACAGATACTTTATTAGGTGTTGTGAGTAATTGTTAATCACTAAACTCAGTTTTATCAAGTTGATACTTGGTAGGTCATAATATATTTAGAATCTTATATGCATTTTAAACACATGGTGCGCCAGTTCAAATTTTATGATCTTTTTCTTCGATACAAGGTTAAATGACCTGTAAATCTAAAAACTACGCCAGTAGATAATGTTATATCTAATCTTTTATATGTATTCTTAGAAAAAAACAATCTGACTTCTACTATTACCATCTTTTTACAGGCCCATAGCCGATCTGAGATTTCTCAAGATCCTGCTGGTAAAGAATCCAAGACTGATCTGATGTTCTGTACGCGGGTTTATCATGATGAAAGCAGCCTGGGGCTGTCAGGAATCAATTGGGTACTCGTCATTGCAATTTGTGCCTTTTCTTTTTGTTTTTTTTTCTTCTTGCAAGTAACTTTTAACGATTCCCTTTGATGTTCTATACAGAGCGACTCCTTAGGACCCTTTGACCTTGGCTTGCCTGTTTCCCGTAAGGTCTCCTCCAGCGGTGATGGTCTTACCATGAGTGGATTTGTCAGATAGCAAAAAGAATATAGAACCAACTCTATCCTACAAAGGCATTGCATAGTAAAGAACTTGGTCAACAATTCTATTTACGTTCATTTGCAAATACTTTGGCATGTTATTTGCAACTGTATAGATTCTTCACTTGAAATATCCTGTAGCTTTGTCAATATAATCCATTGATCTGGGCGAACTTTATAGGCACACGTCGATTGCACAGAGATGGTGTATAGATAGAGTACATGAACTAAATCAAATCTTTGAGGAAAATATAGTTGCCAAATCTTGTGGTTTTGTTCAGCAGGTTACAGGTTTTTTTCTTTCTTTCTCAACATGGG TTTCTTCTTCCAAAATTCTATCCATCTTGATTGCTACCTCCTTGTGTTGTACTCACTATCTTCTCTTTTCGCTCTGAAACTCAAGAAATTCAAGGCAGTTCTCCTCAAGGACGCTTGGAAATTTGCTGATACCTGTGGCTGTGGTAGGAAGGATTAGAACCATAAAGAAAATCTGTACATGGAATTAGGTTTTCTGGATGAAAAAAGAAGGGAAGGGATAAAATAGCACGAACAATTTGGTAGTTTCCTGTGTAGCATCTGTCACGAATGGAACACAGTTTATATGATGACGAAGTTGCTGACTGTTAGCCGTTTCAGGCAGGCGCCCAGATAGAAGGGCAAAAAAGTTGGGGAAAAGGAGTGTGAAATCTGCTGACACGATTGGAGTTCAGAAGTCTAGAAAGATAATTTCTCAGGAGATAAAAGCTCTCGACAATGCACACATTGAAGATAACTTGAAGAATGTACAGAATTCGGTTCATCAAATTAATCCAACAGAAATGACAGAGAGGACACCTCTTATTGATCTTTATCCCACACAGATGCCCCATCCTCGCACAAAGATCAAGCTTCAACTTTTTCCGATAAATGAAAAGACCCGCATGGCATTGGAAAAGGATGGATATCATCCACATTTGGAACTGACTTTAAGGGCTCGAAAGAAAATTTCTTCGGTATTAAACCATCTTATTAGCAAGTGGGGATGTTCTAATGTAGCACGAGGGGAGCTCAGGCTTTTTCCATACAGTAAGCCATCAAGTCTTGTCAGTGGTCTAAAATGGACTCTGGAAGATCGTGACATCAGTGCTGGAGATGTCTATGCAGCTGTTGGAGGTTCAATTTTCCGCTTAAGATACGGCTGGGTCTCCACATCCACTCCAAAACTTCATTTATCCTCGAAAGGCTTGGAGAAAGGTTGCAGTAGTACCCTGCAAATCATACACGGGGAAGGCAAACAATCTGAGGAAACGATGGATGATATCAAGTCAAGCAATACGAATGGAGTGAATAACACTGCTGCACCAGAGAAGACTGTGGATTGTCCAACTAATCCAACGGATAATGAGCCACCGTTGGATTCTGGTCATCAGTTGGCATCAGAATGTGGAATCCTGCAGTTAGATAGTATATCAAACATAAGCATGGGAGGCCTCCTTTCTGAAGCTTCCTTAATGGGAAAATGCAGTAGCTGGGATTCAAAGATAACAAGGGGCACTGCAAGCGTGCAGCCAGCTGAAGTAATAACTGATTCCCTTGATGCATGCATTGCTGCGGCCCAGATGAGATTTTCTGGCGTTTCAAAGCAGCCCCTTAATGATCAACATTCGTCTATTTTGGATGCCGAGCAAACTTGTGATGCATTTGCTATGAAAAGACTCGCTTCATTGAGCAAAGACACTCTTTCTCTAGATGCTAGTGCTGGAGGCACCTTCCAAGATGCCGATTCCAAGTTGTTCAAATTTCCTAAAACACCTCAGGCCCATAGCCGATCTGAGATTTCTCAAGATCCTGCTGGTAAAGAATCCAAGACTGATCTGATGTTCTGTACGCGGGTTTATCATGATGAAAGCAGCCTGGGGCTGTCAGGAATCAATTGGAGCGACTCCTTAGGACCCTTTGACCTTGGCTTGCCTGTTTCCCGTAAGGTCTCCTCCAGCGGTGATGGTCTTACCATGAGTGGATTTGTCAGATAGCAAAAAGAATATAGAACCAACTCTATCCTACAAAGGCATTGCATAGTAAAGAACTTGGTCAACAATTCTATTTACGTTCATTTGCAAATACTTTGGCATGTTATTTGCAACTGTATAGATTCTTCACTTGAAATATCCTGTAGCTTTGTCAATATAATCCATTGATCTGGGCGAACTTTATAGGCACACGTCGATTGCACAGAGATGGTGTATAGATAGAGTACATGAACTAAATCAAATCTTTGAGGAAAATATAGTTGCCAAATCTTGTGGTTTTGTTCAGCAGGTTACAGGTTTTTTTCTTTCTTTCTCAACATGGG ATGACAGAGAGGACACCTCTTATTGATCTTTATCCCACACAGATGCCCCATCCTCGCACAAAGATCAAGCTTCAACTTTTTCCGATAAATGAAAAGACCCGCATGGCATTGGAAAAGGATGGATATCATCCACATTTGGAACTGACTTTAAGGGCTCGAAAGAAAATTTCTTCGGTATTAAACCATCTTATTAGCAAGTGGGGATGTTCTAATGTAGCACGAGGGGAGCTCAGGCTTTTTCCATACAGTAAGCCATCAAGTCTTGTCAGTGGTCTAAAATGGACTCTGGAAGATCGTGACATCAGTGCTGGAGATGTCTATGCAGCTGTTGGAGGTTCAATTTTCCGCTTAAGATACGGCTGGGTCTCCACATCCACTCCAAAACTTCATTTATCCTCGAAAGGCTTGGAGAAAGGTTGCAGTAGTACCCTGCAAATCATACACGGGGAAGGCAAACAATCTGAGGAAACGATGGATGATATCAAGTCAAGCAATACGAATGGAGTGAATAACACTGCTGCACCAGAGAAGACTGTGGATTGTCCAACTAATCCAACGGATAATGAGCCACCGTTGGATTCTGGTCATCAGTTGGCATCAGAATGTGGAATCCTGCAGTTAGATAGTATATCAAACATAAGCATGGGAGGCCTCCTTTCTGAAGCTTCCTTAATGGGAAAATGCAGTAGCTGGGATTCAAAGATAACAAGGGGCACTGCAAGCGTGCAGCCAGCTGAAGTAATAACTGATTCCCTTGATGCATGCATTGCTGCGGCCCAGATGAGATTTTCTGGCGTTTCAAAGCAGCCCCTTAATGATCAACATTCGTCTATTTTGGATGCCGAGCAAACTTGTGATGCATTTGCTATGAAAAGACTCGCTTCATTGAGCAAAGACACTCTTTCTCTAGATGCTAGTGCTGGAGGCACCTTCCAAGATGCCGATTCCAAGTTGTTCAAATTTCCTAAAACACCTCAGGCCCATAGCCGATCTGAGATTTCTCAAGATCCTGCTGGTAAAGAATCCAAGACTGATCTGATGTTCTGTACGCGGGTTTATCATGATGAAAGCAGCCTGGGGCTGTCAGGAATCAATTGGAGCGACTCCTTAGGACCCTTTGACCTTGGCTTGCCTGTTTCCCGTAAGGTCTCCTCCAGCGGTGATGGTCTTACCATGAGTGGATTTGTCAGATAG MTERTPLIDLYPTQMPHPRTKIKLQLFPINEKTRMALEKDGYHPHLELTLRARKKISSVLNHLISKWGCSNVARGELRLFPYSKPSSLVSGLKWTLEDRDISAGDVYAAVGGSIFRLRYGWVSTSTPKLHLSSKGLEKGCSSTLQIIHGEGKQSEETMDDIKSSNTNGVNNTAAPEKTVDCPTNPTDNEPPLDSGHQLASECGILQLDSISNISMGGLLSEASLMGKCSSWDSKITRGTASVQPAEVITDSLDACIAAAQMRFSGVSKQPLNDQHSSILDAEQTCDAFAMKRLASLSKDTLSLDASAGGTFQDADSKLFKFPKTPQAHSRSEISQDPAGKESKTDLMFCTRVYHDESSLGLSGINWSDSLGPFDLGLPVSRKVSSSGDGLTMSGFVR
BLAST of Lsi01G011060 vs. Swiss-Prot
Match: TKI1_ARATH (TSL-kinase interacting protein 1 OS=Arabidopsis thaliana GN=TKI1 PE=1 SV=2) HSP 1 Score: 136.7 bits (343), Expect = 5.4e-31 Identity = 127/392 (32.40%), Postives = 184/392 (46.94%), Query Frame = 1
BLAST of Lsi01G011060 vs. TrEMBL
Match: A0A0A0KJ55_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_6G486850 PE=4 SV=1) HSP 1 Score: 667.5 bits (1721), Expect = 9.8e-189 Identity = 344/400 (86.00%), Postives = 366/400 (91.50%), Query Frame = 1
BLAST of Lsi01G011060 vs. TrEMBL
Match: A0A0D2SY97_GOSRA (Uncharacterized protein OS=Gossypium raimondii GN=B456_008G100900 PE=4 SV=1) HSP 1 Score: 302.0 bits (772), Expect = 1.1e-78 Identity = 187/410 (45.61%), Postives = 256/410 (62.44%), Query Frame = 1
BLAST of Lsi01G011060 vs. TrEMBL
Match: V4S1H6_9ROSI (Uncharacterized protein OS=Citrus clementina GN=CICLE_v10025563mg PE=4 SV=1) HSP 1 Score: 297.0 bits (759), Expect = 3.5e-77 Identity = 180/392 (45.92%), Postives = 245/392 (62.50%), Query Frame = 1
BLAST of Lsi01G011060 vs. TrEMBL
Match: V4SKL8_9ROSI (Uncharacterized protein OS=Citrus clementina GN=CICLE_v10025563mg PE=4 SV=1) HSP 1 Score: 287.0 bits (733), Expect = 3.6e-74 Identity = 176/379 (46.44%), Postives = 235/379 (62.01%), Query Frame = 1
BLAST of Lsi01G011060 vs. TrEMBL
Match: M5W553_PRUPE (Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa020776mg PE=4 SV=1) HSP 1 Score: 285.4 bits (729), Expect = 1.0e-73 Identity = 178/409 (43.52%), Postives = 242/409 (59.17%), Query Frame = 1
BLAST of Lsi01G011060 vs. TAIR10
Match: AT2G36960.3 (AT2G36960.3 TSL-kinase interacting protein 1) HSP 1 Score: 136.7 bits (343), Expect = 3.0e-32 Identity = 127/392 (32.40%), Postives = 184/392 (46.94%), Query Frame = 1
BLAST of Lsi01G011060 vs. TAIR10
Match: AT4G39380.2 (AT4G39380.2 FUNCTIONS IN: molecular_function unknown) HSP 1 Score: 133.7 bits (335), Expect = 2.6e-31 Identity = 93/242 (38.43%), Postives = 135/242 (55.79%), Query Frame = 1
BLAST of Lsi01G011060 vs. NCBI nr
Match: gi|778717969|ref|XP_004142043.2| (PREDICTED: TSL-kinase interacting protein 1 [Cucumis sativus]) HSP 1 Score: 667.5 bits (1721), Expect = 1.4e-188 Identity = 344/400 (86.00%), Postives = 366/400 (91.50%), Query Frame = 1
BLAST of Lsi01G011060 vs. NCBI nr
Match: gi|659079136|ref|XP_008440095.1| (PREDICTED: TSL-kinase interacting protein 1 isoform X1 [Cucumis melo]) HSP 1 Score: 659.1 bits (1699), Expect = 5.0e-186 Identity = 342/398 (85.93%), Postives = 357/398 (89.70%), Query Frame = 1
BLAST of Lsi01G011060 vs. NCBI nr
Match: gi|659079176|ref|XP_008440116.1| (PREDICTED: TSL-kinase interacting protein 1 isoform X2 [Cucumis melo]) HSP 1 Score: 642.5 bits (1656), Expect = 4.8e-181 Identity = 337/398 (84.67%), Postives = 352/398 (88.44%), Query Frame = 1
BLAST of Lsi01G011060 vs. NCBI nr
Match: gi|659079178|ref|XP_008440117.1| (PREDICTED: TSL-kinase interacting protein 1 isoform X3 [Cucumis melo]) HSP 1 Score: 637.9 bits (1644), Expect = 1.2e-179 Identity = 332/384 (86.46%), Postives = 345/384 (89.84%), Query Frame = 1
BLAST of Lsi01G011060 vs. NCBI nr
Match: gi|823207646|ref|XP_012437404.1| (PREDICTED: TSL-kinase interacting protein 1 isoform X2 [Gossypium raimondii]) HSP 1 Score: 302.0 bits (772), Expect = 1.6e-78 Identity = 187/410 (45.61%), Postives = 256/410 (62.44%), Query Frame = 1
The following BLAST results are available for this feature:
The following terms have been associated with this gene:
GO Assignments
This gene is annotated with the following GO terms.
The following mRNA feature(s) are a part of this gene:
Analysis Name: InterPro Annotations of Lagenaria siceraria
Date Performed: 2017-09-18
The following gene(s) are orthologous to this gene: The following gene(s) are paralogous to this gene: None The following block(s) are covering this gene:
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