Csa6G486850 (gene) Cucumber (Chinese Long) v2
The following sequences are available for this feature:
Legend: five_prime_UTRCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.CAACCGACTCATCTGAAAAATTTTATATTTCCCGCGTTTATCATTTTCACGGCCTAATTCAAACCTCTCTCAAGCAGAACGCCTCTCTCCGGCGAAAGGTTCTGACCTCACTGTATGTTTTTCTTTTGTCATCTACCGATTTATTCAAATTTAATTCATCTTGATCTTCACCTCACTGTGTCTACTTGCTATCTTCTATCTTCGTTCTGGAACTCGAGAAATTCAATTTGTATGCGTTTTCTTTTTCTTTTTCTTTCCAGTTGGATTCAGTACGTTTGTCTTGCTCAATTTCGTTTATGTTTAGCAGCTTTTAATGGTCATTTTTTTCTTCTGTTGATTTGTATGTTTGTTTGTTTTTTTTGTGTGGAATTTTAGTAGTTTGTTGATGTTCTGCTGCAATTTTTGCTCTGCGATGTAATGACCTAAAGTATGCCTTGTAGACATTAGGTATTAGATATTGATTATGATCTGTACATCTCAGTTGGTTTGATAATAGTTTTCAACCATTAAAGTACGAATTGCGGCTTTTGAATGCGTGATTTATATTCTCTTTTTTTGTATAGAGTTATTCTTAAGGACGCTTGGAGAATTGCTGATCCCTGTGGTAGGTACGTTTCCGAGTTAGTACAGTGAGTTCTATTGTTTATATCATGGCAGTGATGGAACTGCTTGATTTTGCGATACTTAACATGGTTGTATATTATCATGGTTATTATGGGGTAGGGAGTATTAGAATCGTAAAGGAAATCTGTACATGGAATTAGGTTTTCTGGATGTAAAAAGGGGATAAAATTGTACGAACAATTTGGTAGTTTCCTGTGTAGCATCTGTCATGAATGGAACACACAGTTTATATGGTGAGAAGTTGCTGATTGTTAGTCCTTTCAGGTTCTGCCTTCTTAATTATTCTTTTAGGACATAGTACAAGTGATTCTCCTCAGACCCTATTGAGTGCTGGAAGGTTGAAACACAATGGAAAAAGGCAAGCGCCCAGATAGAAGGTCAAAAAAGTTGGGGAAAAGGTGTGTGAAGTCTGCTGACAGGGTTGGAGTTCAGAAGTCTAGAAAGATTATTTCTCAGGAGATGAAAGCTCTGGACAACGCACACATTGAAGGTTTGATAACCAAATCCCTTTGTTTCACATTGTTCTTTCAACACAAACTATTTCTCCAAAATTTCTTGCCTTGTTTTGGGATTTGTTTATTTCTTAAATTGGTGTCCCTGCATCGTTACATAATGATTATATGTGCTGTTCGAGTGCAAGAAAGAACTAATTCCTCTGCGTACGGTTATTTTCTTCATTATTTTACAAGACTGTTGTTTACAAACTACATACTTTTTTTATTTAGTGCAGATAGCTTGAAGAATGTAGAGAGTTCAGCTGATCGAACTAATCCAGCAGAAGTGACGGAGAGGATACCTCTTCTTGATCTTTATCCCACACAGATGCCCCATCCTCGCACAAAAATCAAGCTTCAACTTTTTCCAATAAATGAAAAAATGCGTATGGCAGTGGAAAAGGTATCGACACAAGGACAAAACACTGACCATTAAGCACAAATGAGTATGACATCTGTATTTCAGTTCTATTTGAAACGTGATAGAACTGTGCCTTTTATTTTTGTAGGAGGGATATCATCCATATTTGGAACTGACTTTAAAGGCTCGAAAGAAAATTTCTTCGGTCTTGAACCATCTAATTAGCAAGTGGGGATCTAATGTAGCACGAGGGGAGCTCACGCTTTTTCCATACAATAAGCCATCAAGTCTTGTCAGTGGTCTAAAATGGACTCTGGAAGATTATGACATCAGTGCTGGAGATGTCTATGCAGCTGTTGGAGGTCCTTCAGTTTTCCGCTTAAGGTGCCCAGTTTTATCATCTCATCTGCCTTGCTAATGATTTATTTATTCATTTAAGTTAAATGTGTTAATTGAAATTATTGTCCTTCTTGAGATACGGCTGGGTCTCCACATCCGTTCCAAAATTTCATTCATTCTCGAAAGGGTTGGAGAAAGGTTGCAGTAGTACCTTGCAAATCATACATGGGGAAGGCAAACAATCTGAGCGAACAATGGATGAGATCAAGTCAAGCAATATGAATGAAATGAATAACACTGCTGCACCAGATAAGACTGTGGATTGTCCAACTAATCCAATGGTATTATATTCAACTTCCCATTATTTTTTGTTAAAATTTTAAATGAACACTCCTACAGTATTACTACAAGAGAACAAATCCATTCTATAATTTAATTTACACGGTTTTTTCCCCTGTTCACATTGCTTATAAGGTCTATGAAATGAACCGTTGATCATATGTCCTGTTGTAAATATTTTGACGCATTGAAGGGTTACGAACTTTGGCTATGCTACACTGGTGAATGATGTGAAATCAAACAAATATACAAGACACATGCATTACATCTGATTCCATCAACAAGTGTGTGCATGCATGTTATTGTTATCTTTTTGAAAAACCAAATTATTATATTTAAACGTGTTTTGTTGCTTGGAGTAAATATTATGATTTCTGAAATTTGACAACACTTTTTGAACTAGGGTAATGAGCCACCGTTAAATTCTGGTCGTCAGTTGTCATCAGAGTGTGGAATCCTGCAGTTTGATAGTATATCGAATATAAGCATGGGAGGGCTCCTTTCTGAAGCTTCCTTAATGGGAAAATTCAGTAACTGGGATCCAAAGATAACAGGGGGCACTGCGAGCGTGCAGCCAGCTGAAGTAATAACTGACTCCCTTGATGCATGCATTGCTGCGGCCCAGATGAGATTTTCTGGAGTTTCAAAGCAGCCCCATAATGAACATCATTCGTCTATTTTGGATGCTGAGCAGACTTGTGATGCATTTTCTATGAAAAGACTCCCTTCATCGAGCAAAGATACTCTTTCTCTAGATGCTACTACTAGGGGCACCTTCCAAGATGCGGATTCCAAGTTCAAATTTCCTAAAACACCTCAGGTCTCTCTCTCTCTCTCTCTCTCTATGTGCACATCTTCGTCTGTTTTAGAGATGAAATGTTTAATGACATCATATGGAGTCAATAGCACATCTTCGTCTGTTTTAGAGATGAAATGGTTAATGACATCATATGGAGTCAATAGCTCCCTGGTCGAGTAATCAGATGGTTCCAATTTGACCGATCTTATTTACGTTTGCTTGCTTTGAACTATGTATTACTAAATCTTGGAACTGTTAAAAAACTCAAAGTTAAATATTATTTGAACTCAAGTCAGGGTATAATATATAAGCATTTATCTAGGAACTTGGGATAGAAAATTGATTGATGAAGTTTAGAATTAATTTAAGGGAAAATATTAATGATTTAAATGTACAGATAATTTGATTCAGTGCCAAAAATTACTTGAAGTTGAGCAAACTCTACGGTGGCGTGTAATCGTTCTTTGTTTTATTATTATCATTTTTTTTTTTTTTGTGAAGGTGTTATGTGTAATGTTAACCACTAACTCAGTTCTATCCAGTTCATACATGGTAGGACATACTATATCATCTTATTTGCATTCTAAACACACGGTGTGTCAGTTCAAATTTAGAATTTTTTCTTTGATCTCAGGTTAAATGACCCCTAAATCTAAAAACTTAGCCAGTAAATTATGTTTAATCCTTTTTATGCATTCTAACAGTTAACAGTCACTTTTGTTCTCTTTTAAAATCTGGCTTTTACCATTGCCATCACTTTACAGGCCCATAGCCGATCTGACCTTTCTCAAGATCCTGCTGGTAAAGAATCCAAAACCGATCCTTCGTTCTGTTCGCGGGTTTATCATGATGAAAGCAGCCTTGGCCTGTCAGGAATCAATTGGGTACACATTTCATTGCAATTCGTGCACTTTTTTTTTCTTCTCCCTTTTCATTTTCTTGGGAGTAGCTTTTAATGATTCCCCTTGATATTCTATTCAGACCGACTCTTTAGGACCCTTTGACCTTGGCTTGGCTGTTCCCCGTAAGGTCTCCTCCAGCGGTGATACTCTTAGCAATAGCATGAGTGGATTTGTCAGATAGCCTTAACAATATAGAACCAACTCCATCCTACGGAAGGCACTATTGCATAGTAAAGAACTTGGTGAACAATAATTTTGATGCAACTGTATAGATTCTTCACTTTAAATATTCTGTAGCTTTTGTCAATTTAATCCATGTACTGTGATTATAGAAGCTGTTGCATTGATCTGGGTGACTTATAGGCATACGTCCATTGCATTGAGATGGTGTATAGATGGAGAGTACATATACTAAATCATATATTTGAGGAAAAAGTATTTGCC ATGGAAAAAGGCAAGCGCCCAGATAGAAGGTCAAAAAAGTTGGGGAAAAGGTGTGTGAAGTCTGCTGACAGGGTTGGAGTTCAGAAGTCTAGAAAGATTATTTCTCAGGAGATGAAAGCTCTGGACAACGCACACATTGAAGATAGCTTGAAGAATGTAGAGAGTTCAGCTGATCGAACTAATCCAGCAGAAGTGACGGAGAGGATACCTCTTCTTGATCTTTATCCCACACAGATGCCCCATCCTCGCACAAAAATCAAGCTTCAACTTTTTCCAATAAATGAAAAAATGCGTATGGCAGTGGAAAAGGAGGGATATCATCCATATTTGGAACTGACTTTAAAGGCTCGAAAGAAAATTTCTTCGGTCTTGAACCATCTAATTAGCAAGTGGGGATCTAATGTAGCACGAGGGGAGCTCACGCTTTTTCCATACAATAAGCCATCAAGTCTTGTCAGTGGTCTAAAATGGACTCTGGAAGATTATGACATCAGTGCTGGAGATGTCTATGCAGCTGTTGGAGGTCCTTCAGTTTTCCGCTTAAGATACGGCTGGGTCTCCACATCCGTTCCAAAATTTCATTCATTCTCGAAAGGGTTGGAGAAAGGTTGCAGTAGTACCTTGCAAATCATACATGGGGAAGGCAAACAATCTGAGCGAACAATGGATGAGATCAAGTCAAGCAATATGAATGAAATGAATAACACTGCTGCACCAGATAAGACTGTGGATTGTCCAACTAATCCAATGGGTAATGAGCCACCGTTAAATTCTGGTCGTCAGTTGTCATCAGAGTGTGGAATCCTGCAGTTTGATAGTATATCGAATATAAGCATGGGAGGGCTCCTTTCTGAAGCTTCCTTAATGGGAAAATTCAGTAACTGGGATCCAAAGATAACAGGGGGCACTGCGAGCGTGCAGCCAGCTGAAGTAATAACTGACTCCCTTGATGCATGCATTGCTGCGGCCCAGATGAGATTTTCTGGAGTTTCAAAGCAGCCCCATAATGAACATCATTCGTCTATTTTGGATGCTGAGCAGACTTGTGATGCATTTTCTATGAAAAGACTCCCTTCATCGAGCAAAGATACTCTTTCTCTAGATGCTACTACTAGGGGCACCTTCCAAGATGCGGATTCCAAGTTCAAATTTCCTAAAACACCTCAGGCCCATAGCCGATCTGACCTTTCTCAAGATCCTGCTGGTAAAGAATCCAAAACCGATCCTTCGTTCTGTTCGCGGGTTTATCATGATGAAAGCAGCCTTGGCCTGTCAGGAATCAATTGGACCGACTCTTTAGGACCCTTTGACCTTGGCTTGGCTGTTCCCCGTAAGGTCTCCTCCAGCGGTGATACTCTTAGCAATAGCATGAGTGGATTTGTCAGATAG ATGGAAAAAGGCAAGCGCCCAGATAGAAGGTCAAAAAAGTTGGGGAAAAGGTGTGTGAAGTCTGCTGACAGGGTTGGAGTTCAGAAGTCTAGAAAGATTATTTCTCAGGAGATGAAAGCTCTGGACAACGCACACATTGAAGATAGCTTGAAGAATGTAGAGAGTTCAGCTGATCGAACTAATCCAGCAGAAGTGACGGAGAGGATACCTCTTCTTGATCTTTATCCCACACAGATGCCCCATCCTCGCACAAAAATCAAGCTTCAACTTTTTCCAATAAATGAAAAAATGCGTATGGCAGTGGAAAAGGAGGGATATCATCCATATTTGGAACTGACTTTAAAGGCTCGAAAGAAAATTTCTTCGGTCTTGAACCATCTAATTAGCAAGTGGGGATCTAATGTAGCACGAGGGGAGCTCACGCTTTTTCCATACAATAAGCCATCAAGTCTTGTCAGTGGTCTAAAATGGACTCTGGAAGATTATGACATCAGTGCTGGAGATGTCTATGCAGCTGTTGGAGGTCCTTCAGTTTTCCGCTTAAGATACGGCTGGGTCTCCACATCCGTTCCAAAATTTCATTCATTCTCGAAAGGGTTGGAGAAAGGTTGCAGTAGTACCTTGCAAATCATACATGGGGAAGGCAAACAATCTGAGCGAACAATGGATGAGATCAAGTCAAGCAATATGAATGAAATGAATAACACTGCTGCACCAGATAAGACTGTGGATTGTCCAACTAATCCAATGGGTAATGAGCCACCGTTAAATTCTGGTCGTCAGTTGTCATCAGAGTGTGGAATCCTGCAGTTTGATAGTATATCGAATATAAGCATGGGAGGGCTCCTTTCTGAAGCTTCCTTAATGGGAAAATTCAGTAACTGGGATCCAAAGATAACAGGGGGCACTGCGAGCGTGCAGCCAGCTGAAGTAATAACTGACTCCCTTGATGCATGCATTGCTGCGGCCCAGATGAGATTTTCTGGAGTTTCAAAGCAGCCCCATAATGAACATCATTCGTCTATTTTGGATGCTGAGCAGACTTGTGATGCATTTTCTATGAAAAGACTCCCTTCATCGAGCAAAGATACTCTTTCTCTAGATGCTACTACTAGGGGCACCTTCCAAGATGCGGATTCCAAGTTCAAATTTCCTAAAACACCTCAGGCCCATAGCCGATCTGACCTTTCTCAAGATCCTGCTGGTAAAGAATCCAAAACCGATCCTTCGTTCTGTTCGCGGGTTTATCATGATGAAAGCAGCCTTGGCCTGTCAGGAATCAATTGGACCGACTCTTTAGGACCCTTTGACCTTGGCTTGGCTGTTCCCCGTAAGGTCTCCTCCAGCGGTGATACTCTTAGCAATAGCATGAGTGGATTTGTCAGATAG MEKGKRPDRRSKKLGKRCVKSADRVGVQKSRKIISQEMKALDNAHIEDSLKNVESSADRTNPAEVTERIPLLDLYPTQMPHPRTKIKLQLFPINEKMRMAVEKEGYHPYLELTLKARKKISSVLNHLISKWGSNVARGELTLFPYNKPSSLVSGLKWTLEDYDISAGDVYAAVGGPSVFRLRYGWVSTSVPKFHSFSKGLEKGCSSTLQIIHGEGKQSERTMDEIKSSNMNEMNNTAAPDKTVDCPTNPMGNEPPLNSGRQLSSECGILQFDSISNISMGGLLSEASLMGKFSNWDPKITGGTASVQPAEVITDSLDACIAAAQMRFSGVSKQPHNEHHSSILDAEQTCDAFSMKRLPSSSKDTLSLDATTRGTFQDADSKFKFPKTPQAHSRSDLSQDPAGKESKTDPSFCSRVYHDESSLGLSGINWTDSLGPFDLGLAVPRKVSSSGDTLSNSMSGFVR*
BLAST of Csa6G486850 vs. Swiss-Prot
Match: TKI1_ARATH (TSL-kinase interacting protein 1 OS=Arabidopsis thaliana GN=TKI1 PE=1 SV=2) HSP 1 Score: 139.0 bits (349), Expect = 1.3e-31 Identity = 147/508 (28.94%), Postives = 220/508 (43.31%), Query Frame = 1
BLAST of Csa6G486850 vs. TrEMBL
Match: A0A0A0KJ55_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_6G486850 PE=4 SV=1) HSP 1 Score: 927.5 bits (2396), Expect = 6.1e-267 Identity = 462/462 (100.00%), Postives = 462/462 (100.00%), Query Frame = 1
BLAST of Csa6G486850 vs. TrEMBL
Match: A0A0D2SY97_GOSRA (Uncharacterized protein OS=Gossypium raimondii GN=B456_008G100900 PE=4 SV=1) HSP 1 Score: 306.6 bits (784), Expect = 5.1e-80 Identity = 201/465 (43.23%), Postives = 274/465 (58.92%), Query Frame = 1
BLAST of Csa6G486850 vs. TrEMBL
Match: A0A061DQV4_THECC (N-terminal nucleophile aminohydrolases (Ntn hydrolases) superfamily protein isoform 1 OS=Theobroma cacao GN=TCM_001294 PE=4 SV=1) HSP 1 Score: 300.1 bits (767), Expect = 4.8e-78 Identity = 190/458 (41.48%), Postives = 266/458 (58.08%), Query Frame = 1
BLAST of Csa6G486850 vs. TrEMBL
Match: V4S1H6_9ROSI (Uncharacterized protein OS=Citrus clementina GN=CICLE_v10025563mg PE=4 SV=1) HSP 1 Score: 295.8 bits (756), Expect = 9.0e-77 Identity = 184/406 (45.32%), Postives = 239/406 (58.87%), Query Frame = 1
BLAST of Csa6G486850 vs. TrEMBL
Match: B9H5M4_POPTR (Uncharacterized protein OS=Populus trichocarpa GN=POPTR_0005s08900g PE=4 SV=1) HSP 1 Score: 291.6 bits (745), Expect = 1.7e-75 Identity = 181/386 (46.89%), Postives = 234/386 (60.62%), Query Frame = 1
BLAST of Csa6G486850 vs. TAIR10
Match: AT4G39380.2 (AT4G39380.2 FUNCTIONS IN: molecular_function unknown) HSP 1 Score: 152.1 bits (383), Expect = 8.2e-37 Identity = 113/313 (36.10%), Postives = 164/313 (52.40%), Query Frame = 1
HSP 2 Score: 82.0 bits (201), Expect = 1.0e-15 Identity = 75/233 (32.19%), Postives = 105/233 (45.06%), Query Frame = 1
BLAST of Csa6G486850 vs. TAIR10
Match: AT2G36960.3 (AT2G36960.3 TSL-kinase interacting protein 1) HSP 1 Score: 139.0 bits (349), Expect = 7.2e-33 Identity = 147/510 (28.82%), Postives = 221/510 (43.33%), Query Frame = 1
BLAST of Csa6G486850 vs. NCBI nr
Match: gi|778717969|ref|XP_004142043.2| (PREDICTED: TSL-kinase interacting protein 1 [Cucumis sativus]) HSP 1 Score: 927.5 bits (2396), Expect = 8.8e-267 Identity = 462/462 (100.00%), Postives = 462/462 (100.00%), Query Frame = 1
BLAST of Csa6G486850 vs. NCBI nr
Match: gi|659079136|ref|XP_008440095.1| (PREDICTED: TSL-kinase interacting protein 1 isoform X1 [Cucumis melo]) HSP 1 Score: 843.2 bits (2177), Expect = 2.2e-241 Identity = 425/463 (91.79%), Postives = 441/463 (95.25%), Query Frame = 1
BLAST of Csa6G486850 vs. NCBI nr
Match: gi|659079176|ref|XP_008440116.1| (PREDICTED: TSL-kinase interacting protein 1 isoform X2 [Cucumis melo]) HSP 1 Score: 823.2 bits (2125), Expect = 2.3e-235 Identity = 419/463 (90.50%), Postives = 435/463 (93.95%), Query Frame = 1
BLAST of Csa6G486850 vs. NCBI nr
Match: gi|659079178|ref|XP_008440117.1| (PREDICTED: TSL-kinase interacting protein 1 isoform X3 [Cucumis melo]) HSP 1 Score: 706.8 bits (1823), Expect = 2.4e-200 Identity = 356/385 (92.47%), Postives = 366/385 (95.06%), Query Frame = 1
BLAST of Csa6G486850 vs. NCBI nr
Match: gi|823207646|ref|XP_012437404.1| (PREDICTED: TSL-kinase interacting protein 1 isoform X2 [Gossypium raimondii]) HSP 1 Score: 307.0 bits (785), Expect = 5.6e-80 Identity = 201/462 (43.51%), Postives = 272/462 (58.87%), Query Frame = 1
The following BLAST results are available for this feature:
The following terms have been associated with this gene:
GO Assignments
This gene is annotated with the following GO terms.
The following mRNA feature(s) are a part of this gene:
Analysis Name: InterPro Annotations of cucumber (Chinese Long)
Date Performed: 2016-09-28
The following gene(s) are orthologous to this gene: The following gene(s) are paralogous to this gene: None The following block(s) are covering this gene:
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