Lsi03G014280 (gene) Bottle gourd (USVL1VR-Ls)

Overview
NameLsi03G014280
Typegene
OrganismLagenaria siceraria (Bottle gourd (USVL1VR-Ls))
Descriptionzinc finger (AN1-like) family protein
Locationchr03 : 25247337 .. 25248392 (+)
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
GTCAATTAGAAGCCTATAAATAACTCAAATTTCCTCCATTTTCTTCGCTATTATCTAACAAACCAAATCTTCTTCCACATATTTCATCCTTATTTCTAATCTCCCTTCACTTCCAATTCCAAAACCTTCCGACGAACAAATCGCCATGGCCGCCGGCGGAGGAACAGAGGCTTTCCCCGATCTCGGCCGCCACTGCCAGCACTCCGATTGCCACCAACTCGATTTCCTCCCCTTCACCTGCGACGGTTGCCAAAAGGTTTCATCCCCAATTCCCAATTAATTTTTTCCATCTCTGGTTTCAATTTTCAGCTTTCATGTTTTTTAACTTCTGAAAATTGTTTGAATGTGAAGGTGTTCTGTTTGGAGCATCGCGGTTTCAAATCCCACGACTGCCCTAAATCCGATCGGAACAGCAGAAAAGTGGTGGTTTGCGAAATCTGCTCGACGTCGATCGAGACCACCGGGAAGGACGGCGGCGACGAGACCAGGATTTTGGAAAGGCATCACGAATCGGGAGATTGCGATCCGAGCAAGAAGAAGAAACCCACATGTGCTGTGAGGCGGTGCCGGGAAATTCTTACGTTTTCCAATACTTGTGTGTGTAAAACCTGCCGGATGAAGGTGTGTTTGAAGCACCGGTTTCCGGCGGAGCATGGTTGTGGACGGCCGTCGTCGACGGCAACGGCAGTGGTGGATAAAGGTCGGTGGAATGAGAAGTTTATGGCGGCTTTGGGGTTGAGGAGCGGCGGCGATTGTGGGAAGAGGGAACGTCCGACGGCGGCGAAGGGATCTTCTCCGACTGCCCCATCTGTTAAAGCTTGTTGATTGGAAATTAATTGTATGAACCATAAAATTTGGTGGCAGTTCCTCCATTTGTTTCATAGAGAAATGGTCATAATTAATAAAGCCTCTCTTTAATAATCTTCTCATAAAAGTTATATTGTAAAGATTAATCCACAAATTTATACATGTAGCTTTATCAAATTCTTGTTACAAGGATTCAATTGATATTGCTAAGGGCCTACATAATTTTACTAATATTTAATTTTGTGTCTT

mRNA sequence

GTCAATTAGAAGCCTATAAATAACTCAAATTTCCTCCATTTTCTTCGCTATTATCTAACAAACCAAATCTTCTTCCACATATTTCATCCTTATTTCTAATCTCCCTTCACTTCCAATTCCAAAACCTTCCGACGAACAAATCGCCATGGCCGCCGGCGGAGGAACAGAGGCTTTCCCCGATCTCGGCCGCCACTGCCAGCACTCCGATTGCCACCAACTCGATTTCCTCCCCTTCACCTGCGACGGTTGCCAAAAGGTGTTCTGTTTGGAGCATCGCGGTTTCAAATCCCACGACTGCCCTAAATCCGATCGGAACAGCAGAAAAGTGGTGGTTTGCGAAATCTGCTCGACGTCGATCGAGACCACCGGGAAGGACGGCGGCGACGAGACCAGGATTTTGGAAAGGCATCACGAATCGGGAGATTGCGATCCGAGCAAGAAGAAGAAACCCACATGTGCTGTGAGGCGGTGCCGGGAAATTCTTACGTTTTCCAATACTTGTGTGTGTAAAACCTGCCGGATGAAGGTGTGTTTGAAGCACCGGTTTCCGGCGGAGCATGGTTGTGGACGGCCGTCGTCGACGGCAACGGCAGTGGTGGATAAAGGTCGGTGGAATGAGAAGTTTATGGCGGCTTTGGGGTTGAGGAGCGGCGGCGATTGTGGGAAGAGGGAACGTCCGACGGCGGCGAAGGGATCTTCTCCGACTGCCCCATCTGTTAAAGCTTGTTGATTGGAAATTAATTGTATGAACCATAAAATTTGGTGGCAGTTCCTCCATTTGTTTCATAGAGAAATGGTCATAATTAATAAAGCCTCTCTTTAATAATCTTCTCATAAAAGTTATATTGTAAAGATTAATCCACAAATTTATACATGTAGCTTTATCAAATTCTTGTTACAAGGATTCAATTGATATTGCTAAGGGCCTACATAATTTTACTAATATTTAATTTTGTGTCTT

Coding sequence (CDS)

ATGGCCGCCGGCGGAGGAACAGAGGCTTTCCCCGATCTCGGCCGCCACTGCCAGCACTCCGATTGCCACCAACTCGATTTCCTCCCCTTCACCTGCGACGGTTGCCAAAAGGTGTTCTGTTTGGAGCATCGCGGTTTCAAATCCCACGACTGCCCTAAATCCGATCGGAACAGCAGAAAAGTGGTGGTTTGCGAAATCTGCTCGACGTCGATCGAGACCACCGGGAAGGACGGCGGCGACGAGACCAGGATTTTGGAAAGGCATCACGAATCGGGAGATTGCGATCCGAGCAAGAAGAAGAAACCCACATGTGCTGTGAGGCGGTGCCGGGAAATTCTTACGTTTTCCAATACTTGTGTGTGTAAAACCTGCCGGATGAAGGTGTGTTTGAAGCACCGGTTTCCGGCGGAGCATGGTTGTGGACGGCCGTCGTCGACGGCAACGGCAGTGGTGGATAAAGGTCGGTGGAATGAGAAGTTTATGGCGGCTTTGGGGTTGAGGAGCGGCGGCGATTGTGGGAAGAGGGAACGTCCGACGGCGGCGAAGGGATCTTCTCCGACTGCCCCATCTGTTAAAGCTTGTTGA

Protein sequence

MAAGGGTEAFPDLGRHCQHSDCHQLDFLPFTCDGCQKVFCLEHRGFKSHDCPKSDRNSRKVVVCEICSTSIETTGKDGGDETRILERHHESGDCDPSKKKKPTCAVRRCREILTFSNTCVCKTCRMKVCLKHRFPAEHGCGRPSSTATAVVDKGRWNEKFMAALGLRSGGDCGKRERPTAAKGSSPTAPSVKAC
Homology
[Close]
BLAST of Lsi03G014280 vs. Swiss-Prot
Match: SAP12_ARATH (Zinc finger AN1 domain-containing stress-associated protein 12 OS=Arabidopsis thaliana GN=SAP12 PE=2 SV=2)

HSP 1 Score: 237.3 bits (604), Expect = 1.4e-61
Identity = 111/191 (58.12%), Postives = 133/191 (69.63%), Query Frame = 1 

Query: 3   AGGGTEAFPDLGRHCQHSDCHQLDFLPFTCDGCQKVFCLEHRGFKSHDCPKSDRNSRKVV 62
           AGGGTEAFPDLG HCQ  DC  LDFLPFTCDGC+ VFCLEHR +KSH+CPKSD  SR V 
Sbjct: 2   AGGGTEAFPDLGEHCQDPDCKLLDFLPFTCDGCKLVFCLEHRSYKSHNCPKSDHGSRTVS 61

Query: 63  VCEICSTSIETTGKDGGDETRILERHHESGDCDPSKKKKPTCAVRRCREILTFSNTCVCK 122
           +CE CS +IETTG D      +LE+H  SGDCDP+KKKKPTC V+RC+EILTF+N   CK
Sbjct: 62  ICETCSIAIETTGFDEKGIKSLLEKHERSGDCDPNKKKKPTCPVKRCKEILTFANNLTCK 121

Query: 123 TCRMKVCLKHRFPAEHGCGRPSSTATAVVDKGRWNEKFMAALGLRSGGDCGKRERPTAAK 182
            C +K CLKHRFP +H C +            RWNE+FM AL LR+   CG+      + 
Sbjct: 122 YCGVKFCLKHRFPTDHVCNKKIINTAGT--SSRWNERFMEALSLRNQKGCGR-----GSS 181

Query: 183 GSSPTAPSVKA 194
            SS ++PSV++
Sbjct: 182 VSSKSSPSVRS 185

[Close]
BLAST of Lsi03G014280 vs. Swiss-Prot
Match: SAP17_ORYSJ (Zinc finger AN1 domain-containing stress-associated protein 17 OS=Oryza sativa subsp. japonica GN=SAP17 PE=2 SV=1)

HSP 1 Score: 187.6 bits (475), Expect = 1.3e-46
Identity = 89/170 (52.35%), Postives = 105/170 (61.76%), Query Frame = 1 

Query: 6   GTEAFPDLGRHCQHSDCHQLDFLPFTCDGCQKVFCLEHRGFKSHDCPKSDRNSRKVVVCE 65
           GTEAFPDLG  C   DC+QLDFLPF CDGC K FC EHR ++ H C ++    R VVVCE
Sbjct: 5   GTEAFPDLGAQCDREDCNQLDFLPFDCDGCGKTFCAEHRTYRDHGCARAADQGRTVVVCE 64

Query: 66  ICSTSIE-TTGKDGGDETRILERHHESGDCDPSKKKKPTCAVRRCREILTFSNTCVCKTC 125
            C  +IE   G  GGD+  +LE H  S  CDP++K+KP C V RC+E LTFSNT  CK C
Sbjct: 65  ACGDAIERRAGDGGGDDAAVLEAHARSRRCDPARKRKPRCPVPRCKETLTFSNTSGCKGC 124

Query: 126 RMKVCLKHRFPAEHGCGRPSSTATAVVDKGRWNEKFMAALGLRSGGDCGK 175
             KVCLKHRFPA+H C        A    G  ++   AA   RS G CG+
Sbjct: 125 GQKVCLKHRFPADHAC--------AGAGAGAASKAAGAAAAARSAGQCGR 166

[Close]
BLAST of Lsi03G014280 vs. Swiss-Prot
Match: SAP13_ARATH (Zinc finger AN1 and C2H2 domain-containing stress-associated protein 13 OS=Arabidopsis thaliana GN=SAP13 PE=2 SV=1)

HSP 1 Score: 149.8 bits (377), Expect = 3.0e-35
Identity = 67/142 (47.18%), Postives = 86/142 (60.56%), Query Frame = 1 

Query: 6   GTEAFPDLGRHCQHSDCHQLDFLPFTCDGCQKVFCLEHRGFKSHDCPKSDRNSRKVVVCE 65
           GT  FPDLG+HC    C Q+DFLPFTCD C +V+CL+HR +  HDCPK +R    VV+C 
Sbjct: 2   GTPEFPDLGKHCSVDYCKQIDFLPFTCDRCLQVYCLDHRSYMKHDCPKGNRGDVTVVICP 61

Query: 66  ICSTSIETTGKDGGDETRILERHHESGDCDPSK----KKKPTCAVRRCREILTFSNTCVC 125
           +C+  +     +  ++  I    H + DCDPS      KK  C V RCRE+LTFSNT  C
Sbjct: 62  LCAKGVRL---NPDEDPNITWEKHVNTDCDPSNYEKAVKKKKCPVPRCRELLTFSNTIKC 121

Query: 126 KTCRMKVCLKHRFPAEHGCGRP 144
           + C +  CLKHRF  +H C  P
Sbjct: 122 RDCSIDHCLKHRFGPDHSCSGP 140

[Close]
BLAST of Lsi03G014280 vs. Swiss-Prot
Match: SAP11_ARATH (Zinc finger AN1 and C2H2 domain-containing stress-associated protein 11 OS=Arabidopsis thaliana GN=SAP11 PE=2 SV=1)

HSP 1 Score: 148.3 bits (373), Expect = 8.8e-35
Identity = 67/142 (47.18%), Postives = 85/142 (59.86%), Query Frame = 1 

Query: 6   GTEAFPDLGRHCQHSDCHQLDFLPFTCDGCQKVFCLEHRGFKSHDCPKSDRNSRKVVVCE 65
           GT  FPDLG+HC    C Q+DFLPFTCD C +VFCL+HR +  H CPK DR    VV+C 
Sbjct: 2   GTPEFPDLGKHCSVDVCKQIDFLPFTCDRCLQVFCLDHRSYMKHSCPKGDREDVTVVICP 61

Query: 66  ICSTSIETTGKDGGDETRILERHHESGDCDPSKKKKPT----CAVRRCREILTFSNTCVC 125
           +C+  +     +  ++  I    H + DCDPS  +K T    C V RC+E LTFSNT  C
Sbjct: 62  LCAKGVRL---NPNEDPNITWEKHVNTDCDPSNYEKATKKKKCPVPRCKEYLTFSNTIKC 121

Query: 126 KTCRMKVCLKHRFPAEHGCGRP 144
           + C +  CLKHRF  +H C  P
Sbjct: 122 RDCNVDHCLKHRFGPDHTCPGP 140

[Close]
BLAST of Lsi03G014280 vs. Swiss-Prot
Match: SAP16_ORYSJ (Zinc finger AN1 and C2H2 domain-containing stress-associated protein 16 OS=Oryza sativa subsp. japonica GN=SAP16 PE=2 SV=2)

HSP 1 Score: 144.1 bits (362), Expect = 1.7e-33
Identity = 65/142 (45.77%), Postives = 85/142 (59.86%), Query Frame = 1 

Query: 6   GTEAFPDLGRHCQHSDCHQLDFLPFTCDGCQKVFCLEHRGFKSHDCPKSDRNSRKVVVCE 65
           GT  FP+LG+HC   DC+Q+DFLPFTCD C  VFCL+HR + SH CP +++    V++C 
Sbjct: 2   GTPEFPNLGKHCSVGDCNQIDFLPFTCDRCDHVFCLQHRSYTSHQCPNANQKDVTVLICP 61

Query: 66  ICSTSIETTGKDGGDETRILERHHESGDCDPSK----KKKPTCAVRRCREILTFSNTCVC 125
           +C+  +     +  ++  I    H + DCDPS      KK  C V  CRE LTFSNT  C
Sbjct: 62  LCAKGVRL---NPNEDPNITWDTHVNSDCDPSNYQKVTKKKKCPVPGCRETLTFSNTIRC 121

Query: 126 KTCRMKVCLKHRFPAEHGCGRP 144
           K C  + CLKHRF  +H C  P
Sbjct: 122 KDCTKEHCLKHRFGPDHKCPGP 140

[Close]
BLAST of Lsi03G014280 vs. TrEMBL
Match: A0A0A0LHV5_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_3G829160 PE=4 SV=1)

HSP 1 Score: 387.9 bits (995), Expect = 7.3e-105
Identity = 179/195 (91.79%), Postives = 185/195 (94.87%), Query Frame = 1 

Query: 1   MAAGGGTEAFPDLGRHCQHSDCHQLDFLPFTCDGCQKVFCLEHRGFKSHDCPKSDRNSRK 60
           MAA GGTEAFPDLGRHCQHSDCHQLDFLPFTCDGCQKVFCL+HRGFKSHDCP+SDRNSRK
Sbjct: 1   MAAAGGTEAFPDLGRHCQHSDCHQLDFLPFTCDGCQKVFCLDHRGFKSHDCPQSDRNSRK 60

Query: 61  VVVCEICSTSIETTGKDGGDETRILERHHESGDCDPSKKKKPTCAVRRCREILTFSNTCV 120
           VVVCEICSTSIETTGKDGGDET++LERHHESGDCDPSKKKKPTCAV+RCREILTFSNTCV
Sbjct: 61  VVVCEICSTSIETTGKDGGDETKVLERHHESGDCDPSKKKKPTCAVKRCREILTFSNTCV 120

Query: 121 CKTCRMKVCLKHRFPAEHGCGRPSSTATAVVDKGRWNEKFMAALGLRSGGDCGKRERP-T 180
           CKTCR+KVCLKHRFPAEHGCG PSS A AVVDKGRWNEKFM ALGLRS GDCGKRER  T
Sbjct: 121 CKTCRLKVCLKHRFPAEHGCGGPSSRAGAVVDKGRWNEKFMVALGLRSEGDCGKRERART 180

Query: 181 AAKGSSPTAPSVKAC 195
             KGSSPTAPSVKAC
Sbjct: 181 GGKGSSPTAPSVKAC 195

[Close]
BLAST of Lsi03G014280 vs. TrEMBL
Match: A0A061EBC4_THECC (Zinc finger family protein OS=Theobroma cacao GN=TCM_016812 PE=4 SV=1)

HSP 1 Score: 290.0 bits (741), Expect = 2.1e-75
Identity = 136/193 (70.47%), Postives = 156/193 (80.83%), Query Frame = 1 

Query: 1   MAAGGGTEAFPDLGRHCQHSDCHQLDFLPFTCDGCQKVFCLEHRGFKSHDCPKSDRNSRK 60
           ++ GGGTEAFPDLGRHCQHSDCHQLDFLPF CDGC KVFCLEHR +KSH+C KSD  SRK
Sbjct: 79  LSMGGGTEAFPDLGRHCQHSDCHQLDFLPFKCDGCHKVFCLEHRSYKSHECLKSDHKSRK 138

Query: 61  VVVCEICSTSIETTGKDGGDETRILERHHESGDCDPSKKKKPTCAVRRCREILTFSNTCV 120
           VVVCEICSTSIE    +G +E  +LERH +SGDCDP+KKKKPTC VRRC++ILTFSNT V
Sbjct: 139 VVVCEICSTSIEIRA-EGEEEKMVLERHEKSGDCDPTKKKKPTCPVRRCKQILTFSNTSV 198

Query: 121 CKTCRMKVCLKHRFPAEHGCGRPSSTATAVVDKGRWNEKFMAALGLRSGGDCGKRERPTA 180
           CKTCR+KVCLKHRFP+EH C + +STA A   +G WN+KF+AAL  R+G DC K  R   
Sbjct: 199 CKTCRLKVCLKHRFPSEHAC-KQTSTAPAEAARGGWNDKFLAALASRNGKDCAKNGR--- 258

Query: 181 AKGSSPTAPSVKA 194
            + SSPT PSVKA
Sbjct: 259 -RSSSPTTPSVKA 265

[Close]
BLAST of Lsi03G014280 vs. TrEMBL
Match: M5X0H0_PRUPE (Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa011876mg PE=4 SV=1)

HSP 1 Score: 285.8 bits (730), Expect = 3.9e-74
Identity = 134/192 (69.79%), Postives = 157/192 (81.77%), Query Frame = 1 

Query: 5   GGTEAFPDLGRHCQHSDCHQLDFLPFTCDGCQKVFCLEHRGFKSHDCPKSDRNSRKVVVC 64
           GGTEAFPDLGRHCQHSDCHQLDFLPF CDGC KVFC+EHR FKSH+CPKSD NSRKV+VC
Sbjct: 3   GGTEAFPDLGRHCQHSDCHQLDFLPFQCDGCHKVFCVEHRSFKSHECPKSDHNSRKVLVC 62

Query: 65  EICSTSIETTGKDG-GDETRILERHHESGDCDPSKKKKPTCAVRRCREILTFSNTCVCKT 124
           EICSTSIETTG+DG  D+  +LE+HH+SG+CDP  KKKPTC VRRC+EILTFSNT  CKT
Sbjct: 63  EICSTSIETTGRDGEKDQMLLLEKHHKSGNCDPRMKKKPTCPVRRCKEILTFSNTSTCKT 122

Query: 125 CRMKVCLKHRFPAEHGCGRPSS-TATAVVDKG-RWNEKFMAALGLRSGGDCGKRERPTAA 184
           C++KVCLKHRFPA+H C + ++ +++ +V  G  WNEKFMAA   R G +CGK ER +  
Sbjct: 123 CQVKVCLKHRFPADHVCRKQTTPSSSLLVGNGVHWNEKFMAAFASRKGKECGKSERDSK- 182

Query: 185 KGSSPTAPSVKA 194
             SS T PSV+A
Sbjct: 183 --SSSTTPSVRA 191

[Close]
BLAST of Lsi03G014280 vs. TrEMBL
Match: A0A067LAI2_JATCU (Uncharacterized protein OS=Jatropha curcas GN=JCGZ_09661 PE=4 SV=1)

HSP 1 Score: 280.4 bits (716), Expect = 1.6e-72
Identity = 126/189 (66.67%), Postives = 152/189 (80.42%), Query Frame = 1 

Query: 1   MAAGGGTEAFPDLGRHCQHSDCHQLDFLPFTCDGCQKVFCLEHRGFKSHDCPKSDRNSRK 60
           M + GGTEAFPDLGRHCQHS+C+QLDFLPF C GCQKVFCLEHR +KSHDCPKS+ NSRK
Sbjct: 1   MGSEGGTEAFPDLGRHCQHSECNQLDFLPFRCHGCQKVFCLEHRAYKSHDCPKSNHNSRK 60

Query: 61  VVVCEICSTSIETTGKDGGDETRILERHHESGDCDPSKKKKPTCAVRRCREILTFSNTCV 120
           VVVC++CSTSIETTG++G DE  ILE+H +SGDCDP KKKKPTC+VRRC+EILTFSNTC+
Sbjct: 61  VVVCDVCSTSIETTGQNGEDEKLILEKHVKSGDCDPLKKKKPTCSVRRCKEILTFSNTCI 120

Query: 121 CKTCRMKVCLKHRFPAEHGCGR----PSSTATAVVDKGRWNEKFMAALGLRSGGDCGKRE 180
           CK+C +KVCLKHRFPA+H C +     SS+  AV   GR N+KF+AA   R+  DC K  
Sbjct: 121 CKSCHLKVCLKHRFPADHACKKLQQGGSSSTQAVASSGRSNDKFLAAFASRNEKDCAKNA 180

Query: 181 RPTAAKGSS 186
           +  ++K  +
Sbjct: 181 QSNSSKAKN 189

[Close]
BLAST of Lsi03G014280 vs. TrEMBL
Match: V4UWX5_9ROSI (Uncharacterized protein OS=Citrus clementina GN=CICLE_v10012852mg PE=4 SV=1)

HSP 1 Score: 277.7 bits (709), Expect = 1.1e-71
Identity = 128/195 (65.64%), Postives = 150/195 (76.92%), Query Frame = 1 

Query: 4   GGGTEAFPDLGRHCQHSDCHQLDFLPFTCDGCQKVFCLEHRGFKSHDCPKSDRNSRKVVV 63
           GGGTEAFPDLG HCQH DCHQLDFLPF CDGC KVFC EHR FKSH+CPKSD  SRKV+V
Sbjct: 2   GGGTEAFPDLGSHCQHQDCHQLDFLPFKCDGCHKVFCFEHRSFKSHECPKSDIKSRKVIV 61

Query: 64  CEICSTSIETTGKDGGDETRILERHHESGDCDPSKKKKPTCAVRRCREILTFSNTCVCKT 123
           CE+CS SIETTG+ G  E  +LE+H +SGDCDP K+KKP+C V+RC+E LTFSNT  CKT
Sbjct: 62  CEVCSVSIETTGEFGEGEKTMLEKHKKSGDCDPRKQKKPSCPVKRCKEKLTFSNTATCKT 121

Query: 124 CRMKVCLKHRFPAEHGCGRPS-----STATAVVDKGRWNEKFMAALGLRSGGDCGKRERP 183
           C +KVCLKHRFPA+H C + S     + A A V KGRWN+KF+ AL  R+G +C K +R 
Sbjct: 122 CNLKVCLKHRFPADHSCKKDSLLGKNAAADAAVGKGRWNDKFLFALASRNGKECSKCDR- 181

Query: 184 TAAKGSSPTAPSVKA 194
               GSS ++PSVKA
Sbjct: 182 ----GSSSSSPSVKA 191

[Close]
BLAST of Lsi03G014280 vs. TAIR10
Match: AT3G28210.1 (AT3G28210.1 zinc finger (AN1-like) family protein)

HSP 1 Score: 237.3 bits (604), Expect = 8.1e-63
Identity = 111/191 (58.12%), Postives = 133/191 (69.63%), Query Frame = 1 

Query: 3   AGGGTEAFPDLGRHCQHSDCHQLDFLPFTCDGCQKVFCLEHRGFKSHDCPKSDRNSRKVV 62
           AGGGTEAFPDLG HCQ  DC  LDFLPFTCDGC+ VFCLEHR +KSH+CPKSD  SR V 
Sbjct: 2   AGGGTEAFPDLGEHCQDPDCKLLDFLPFTCDGCKLVFCLEHRSYKSHNCPKSDHGSRTVS 61

Query: 63  VCEICSTSIETTGKDGGDETRILERHHESGDCDPSKKKKPTCAVRRCREILTFSNTCVCK 122
           +CE CS +IETTG D      +LE+H  SGDCDP+KKKKPTC V+RC+EILTF+N   CK
Sbjct: 62  ICETCSIAIETTGFDEKGIKSLLEKHERSGDCDPNKKKKPTCPVKRCKEILTFANNLTCK 121

Query: 123 TCRMKVCLKHRFPAEHGCGRPSSTATAVVDKGRWNEKFMAALGLRSGGDCGKRERPTAAK 182
            C +K CLKHRFP +H C +            RWNE+FM AL LR+   CG+      + 
Sbjct: 122 YCGVKFCLKHRFPTDHVCNKKIINTAGT--SSRWNERFMEALSLRNQKGCGR-----GSS 181

Query: 183 GSSPTAPSVKA 194
            SS ++PSV++
Sbjct: 182 VSSKSSPSVRS 185

[Close]
BLAST of Lsi03G014280 vs. TAIR10
Match: AT3G57480.1 (AT3G57480.1 zinc finger (C2H2 type, AN1-like) family protein)

HSP 1 Score: 149.8 bits (377), Expect = 1.7e-36
Identity = 67/142 (47.18%), Postives = 86/142 (60.56%), Query Frame = 1 

Query: 6   GTEAFPDLGRHCQHSDCHQLDFLPFTCDGCQKVFCLEHRGFKSHDCPKSDRNSRKVVVCE 65
           GT  FPDLG+HC    C Q+DFLPFTCD C +V+CL+HR +  HDCPK +R    VV+C 
Sbjct: 2   GTPEFPDLGKHCSVDYCKQIDFLPFTCDRCLQVYCLDHRSYMKHDCPKGNRGDVTVVICP 61

Query: 66  ICSTSIETTGKDGGDETRILERHHESGDCDPSK----KKKPTCAVRRCREILTFSNTCVC 125
           +C+  +     +  ++  I    H + DCDPS      KK  C V RCRE+LTFSNT  C
Sbjct: 62  LCAKGVRL---NPDEDPNITWEKHVNTDCDPSNYEKAVKKKKCPVPRCRELLTFSNTIKC 121

Query: 126 KTCRMKVCLKHRFPAEHGCGRP 144
           + C +  CLKHRF  +H C  P
Sbjct: 122 RDCSIDHCLKHRFGPDHSCSGP 140

[Close]
BLAST of Lsi03G014280 vs. TAIR10
Match: AT2G41835.1 (AT2G41835.1 zinc finger (C2H2 type, AN1-like) family protein)

HSP 1 Score: 148.3 bits (373), Expect = 4.9e-36
Identity = 67/142 (47.18%), Postives = 85/142 (59.86%), Query Frame = 1 

Query: 6   GTEAFPDLGRHCQHSDCHQLDFLPFTCDGCQKVFCLEHRGFKSHDCPKSDRNSRKVVVCE 65
           GT  FPDLG+HC    C Q+DFLPFTCD C +VFCL+HR +  H CPK DR    VV+C 
Sbjct: 2   GTPEFPDLGKHCSVDVCKQIDFLPFTCDRCLQVFCLDHRSYMKHSCPKGDREDVTVVICP 61

Query: 66  ICSTSIETTGKDGGDETRILERHHESGDCDPSKKKKPT----CAVRRCREILTFSNTCVC 125
           +C+  +     +  ++  I    H + DCDPS  +K T    C V RC+E LTFSNT  C
Sbjct: 62  LCAKGVRL---NPNEDPNITWEKHVNTDCDPSNYEKATKKKKCPVPRCKEYLTFSNTIKC 121

Query: 126 KTCRMKVCLKHRFPAEHGCGRP 144
           + C +  CLKHRF  +H C  P
Sbjct: 122 RDCNVDHCLKHRFGPDHTCPGP 140

[Close]
BLAST of Lsi03G014280 vs. TAIR10
Match: AT5G48205.1 (AT5G48205.1 zinc ion binding)

HSP 1 Score: 69.3 bits (168), Expect = 2.9e-12
Identity = 40/110 (36.36%), Postives = 48/110 (43.64%), Query Frame = 1 

Query: 6   GTEAFPDLGRHCQHSDCHQLDFLPFTCDGCQKVFCLEHRGFKSHDCPKSDRNSRKVVVCE 65
           GT  FPDLG+HC    C Q+DFLPFTCD C +V CL+H  +  +  P  D N        
Sbjct: 2   GTPEFPDLGKHCSVDVCTQIDFLPFTCDRCLQVLCLDHCSYMLN--PDEDSNI------- 61

Query: 66  ICSTSIETTGKDGGDETRILERHHESGDCDPS------KKKKPTCAVRRC 110
                               ++H    DCDPS      KKKK  C V  C
Sbjct: 62  ------------------TWDKHVNDTDCDPSNYENDVKKKKKQCPVSSC 84

[Close]
BLAST of Lsi03G014280 vs. NCBI nr
Match: gi|659085534|ref|XP_008443470.1| (PREDICTED: zinc finger AN1 domain-containing stress-associated protein 12 [Cucumis melo])

HSP 1 Score: 396.7 bits (1018), Expect = 2.3e-107
Identity = 184/195 (94.36%), Postives = 188/195 (96.41%), Query Frame = 1 

Query: 1   MAAGGGTEAFPDLGRHCQHSDCHQLDFLPFTCDGCQKVFCLEHRGFKSHDCPKSDRNSRK 60
           MAA GGTEAFPDLGRHCQHSDCHQLDFLPFTCDGCQKVFC EHRGFKSHDCP+SDRNSRK
Sbjct: 1   MAAAGGTEAFPDLGRHCQHSDCHQLDFLPFTCDGCQKVFCSEHRGFKSHDCPESDRNSRK 60

Query: 61  VVVCEICSTSIETTGKDGGDETRILERHHESGDCDPSKKKKPTCAVRRCREILTFSNTCV 120
           VVVCEICSTSIETTGKDGGDET+ILERHHESGDCDPSKKKKPTCAV+RCREILTFSNTCV
Sbjct: 61  VVVCEICSTSIETTGKDGGDETKILERHHESGDCDPSKKKKPTCAVKRCREILTFSNTCV 120

Query: 121 CKTCRMKVCLKHRFPAEHGCGRPSSTATAVVDKGRWNEKFMAALGLRSGGDCGKRERP-T 180
           CKTCR+KVCLKHRFPAEHGCGRPSSTA AV DKGRWNEKFMAALGLRSG DCGKRERP T
Sbjct: 121 CKTCRLKVCLKHRFPAEHGCGRPSSTAGAVADKGRWNEKFMAALGLRSGEDCGKRERPRT 180

Query: 181 AAKGSSPTAPSVKAC 195
            AKGSSPTAPSVKAC
Sbjct: 181 GAKGSSPTAPSVKAC 195

[Close]
BLAST of Lsi03G014280 vs. NCBI nr
Match: gi|778685708|ref|XP_011652261.1| (PREDICTED: zinc finger AN1 domain-containing stress-associated protein 12 [Cucumis sativus])

HSP 1 Score: 387.9 bits (995), Expect = 1.1e-104
Identity = 179/195 (91.79%), Postives = 185/195 (94.87%), Query Frame = 1 

Query: 1   MAAGGGTEAFPDLGRHCQHSDCHQLDFLPFTCDGCQKVFCLEHRGFKSHDCPKSDRNSRK 60
           MAA GGTEAFPDLGRHCQHSDCHQLDFLPFTCDGCQKVFCL+HRGFKSHDCP+SDRNSRK
Sbjct: 1   MAAAGGTEAFPDLGRHCQHSDCHQLDFLPFTCDGCQKVFCLDHRGFKSHDCPQSDRNSRK 60

Query: 61  VVVCEICSTSIETTGKDGGDETRILERHHESGDCDPSKKKKPTCAVRRCREILTFSNTCV 120
           VVVCEICSTSIETTGKDGGDET++LERHHESGDCDPSKKKKPTCAV+RCREILTFSNTCV
Sbjct: 61  VVVCEICSTSIETTGKDGGDETKVLERHHESGDCDPSKKKKPTCAVKRCREILTFSNTCV 120

Query: 121 CKTCRMKVCLKHRFPAEHGCGRPSSTATAVVDKGRWNEKFMAALGLRSGGDCGKRERP-T 180
           CKTCR+KVCLKHRFPAEHGCG PSS A AVVDKGRWNEKFM ALGLRS GDCGKRER  T
Sbjct: 121 CKTCRLKVCLKHRFPAEHGCGGPSSRAGAVVDKGRWNEKFMVALGLRSEGDCGKRERART 180

Query: 181 AAKGSSPTAPSVKAC 195
             KGSSPTAPSVKAC
Sbjct: 181 GGKGSSPTAPSVKAC 195

[Close]
BLAST of Lsi03G014280 vs. NCBI nr
Match: gi|590645511|ref|XP_007031364.1| (Zinc finger family protein [Theobroma cacao])

HSP 1 Score: 290.0 bits (741), Expect = 3.0e-75
Identity = 136/193 (70.47%), Postives = 156/193 (80.83%), Query Frame = 1 

Query: 1   MAAGGGTEAFPDLGRHCQHSDCHQLDFLPFTCDGCQKVFCLEHRGFKSHDCPKSDRNSRK 60
           ++ GGGTEAFPDLGRHCQHSDCHQLDFLPF CDGC KVFCLEHR +KSH+C KSD  SRK
Sbjct: 79  LSMGGGTEAFPDLGRHCQHSDCHQLDFLPFKCDGCHKVFCLEHRSYKSHECLKSDHKSRK 138

Query: 61  VVVCEICSTSIETTGKDGGDETRILERHHESGDCDPSKKKKPTCAVRRCREILTFSNTCV 120
           VVVCEICSTSIE    +G +E  +LERH +SGDCDP+KKKKPTC VRRC++ILTFSNT V
Sbjct: 139 VVVCEICSTSIEIRA-EGEEEKMVLERHEKSGDCDPTKKKKPTCPVRRCKQILTFSNTSV 198

Query: 121 CKTCRMKVCLKHRFPAEHGCGRPSSTATAVVDKGRWNEKFMAALGLRSGGDCGKRERPTA 180
           CKTCR+KVCLKHRFP+EH C + +STA A   +G WN+KF+AAL  R+G DC K  R   
Sbjct: 199 CKTCRLKVCLKHRFPSEHAC-KQTSTAPAEAARGGWNDKFLAALASRNGKDCAKNGR--- 258

Query: 181 AKGSSPTAPSVKA 194
            + SSPT PSVKA
Sbjct: 259 -RSSSPTTPSVKA 265

[Close]
BLAST of Lsi03G014280 vs. NCBI nr
Match: gi|595974373|ref|XP_007217767.1| (hypothetical protein PRUPE_ppa011876mg [Prunus persica])

HSP 1 Score: 285.8 bits (730), Expect = 5.6e-74
Identity = 134/192 (69.79%), Postives = 157/192 (81.77%), Query Frame = 1 

Query: 5   GGTEAFPDLGRHCQHSDCHQLDFLPFTCDGCQKVFCLEHRGFKSHDCPKSDRNSRKVVVC 64
           GGTEAFPDLGRHCQHSDCHQLDFLPF CDGC KVFC+EHR FKSH+CPKSD NSRKV+VC
Sbjct: 3   GGTEAFPDLGRHCQHSDCHQLDFLPFQCDGCHKVFCVEHRSFKSHECPKSDHNSRKVLVC 62

Query: 65  EICSTSIETTGKDG-GDETRILERHHESGDCDPSKKKKPTCAVRRCREILTFSNTCVCKT 124
           EICSTSIETTG+DG  D+  +LE+HH+SG+CDP  KKKPTC VRRC+EILTFSNT  CKT
Sbjct: 63  EICSTSIETTGRDGEKDQMLLLEKHHKSGNCDPRMKKKPTCPVRRCKEILTFSNTSTCKT 122

Query: 125 CRMKVCLKHRFPAEHGCGRPSS-TATAVVDKG-RWNEKFMAALGLRSGGDCGKRERPTAA 184
           C++KVCLKHRFPA+H C + ++ +++ +V  G  WNEKFMAA   R G +CGK ER +  
Sbjct: 123 CQVKVCLKHRFPADHVCRKQTTPSSSLLVGNGVHWNEKFMAAFASRKGKECGKSERDSK- 182

Query: 185 KGSSPTAPSVKA 194
             SS T PSV+A
Sbjct: 183 --SSSTTPSVRA 191

[Close]
BLAST of Lsi03G014280 vs. NCBI nr
Match: gi|645249255|ref|XP_008230667.1| (PREDICTED: zinc finger AN1 domain-containing stress-associated protein 12 [Prunus mume])

HSP 1 Score: 282.3 bits (721), Expect = 6.2e-73
Identity = 133/192 (69.27%), Postives = 156/192 (81.25%), Query Frame = 1 

Query: 5   GGTEAFPDLGRHCQHSDCHQLDFLPFTCDGCQKVFCLEHRGFKSHDCPKSDRNSRKVVVC 64
           GGTEAFPDLGRHCQHSDCHQLDFLPF CDGC KVFC+EHR FKSH CPKSD NSRKV+VC
Sbjct: 3   GGTEAFPDLGRHCQHSDCHQLDFLPFQCDGCHKVFCVEHRSFKSHQCPKSDHNSRKVLVC 62

Query: 65  EICSTSIETTGKDG-GDETRILERHHESGDCDPSKKKKPTCAVRRCREILTFSNTCVCKT 124
           EICSTSIETTG+DG  D+  +LE+H +SG+CDP  KKKPTC VRRC+EILTFSNT  CKT
Sbjct: 63  EICSTSIETTGRDGEKDQKLLLEKHQKSGNCDPRMKKKPTCPVRRCKEILTFSNTSTCKT 122

Query: 125 CRMKVCLKHRFPAEHGCGRPSS-TATAVVDKG-RWNEKFMAALGLRSGGDCGKRERPTAA 184
           C++KVCLKHRFPA+H C + ++ +++ +V  G RWNEKF+AA   R G +CGK ER +  
Sbjct: 123 CQVKVCLKHRFPADHVCRKQTTPSSSLLVGNGVRWNEKFVAAFASRKGKECGKSERDSK- 182

Query: 185 KGSSPTAPSVKA 194
             SS T PSV+A
Sbjct: 183 --SSSTTPSVRA 191

The following BLAST results are available for this feature:
BLAST of Lsi03G014280 vs. Swiss-Prot
Match NameE-valueIdentityDescription
SAP12_ARATH1.4e-6158.12Zinc finger AN1 domain-containing stress-associated protein 12 OS=Arabidopsis th... [more]
SAP17_ORYSJ1.3e-4652.35Zinc finger AN1 domain-containing stress-associated protein 17 OS=Oryza sativa s... [more]
SAP13_ARATH3.0e-3547.18Zinc finger AN1 and C2H2 domain-containing stress-associated protein 13 OS=Arabi... [more]
SAP11_ARATH8.8e-3547.18Zinc finger AN1 and C2H2 domain-containing stress-associated protein 11 OS=Arabi... [more]
SAP16_ORYSJ1.7e-3345.77Zinc finger AN1 and C2H2 domain-containing stress-associated protein 16 OS=Oryza... [more]
BLAST of Lsi03G014280 vs. TrEMBL
Match NameE-valueIdentityDescription
A0A0A0LHV5_CUCSA7.3e-10591.79Uncharacterized protein OS=Cucumis sativus GN=Csa_3G829160 PE=4 SV=1[more]
A0A061EBC4_THECC2.1e-7570.47Zinc finger family protein OS=Theobroma cacao GN=TCM_016812 PE=4 SV=1[more]
M5X0H0_PRUPE3.9e-7469.79Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa011876mg PE=4 SV=1[more]
A0A067LAI2_JATCU1.6e-7266.67Uncharacterized protein OS=Jatropha curcas GN=JCGZ_09661 PE=4 SV=1[more]
V4UWX5_9ROSI1.1e-7165.64Uncharacterized protein OS=Citrus clementina GN=CICLE_v10012852mg PE=4 SV=1[more]
BLAST of Lsi03G014280 vs. TAIR10
Match NameE-valueIdentityDescription
AT3G28210.18.1e-6358.12 zinc finger (AN1-like) family protein[more]
AT3G57480.11.7e-3647.18 zinc finger (C2H2 type, AN1-like) family protein[more]
AT2G41835.14.9e-3647.18 zinc finger (C2H2 type, AN1-like) family protein[more]
AT5G48205.12.9e-1236.36 zinc ion binding[more]
BLAST of Lsi03G014280 vs. NCBI nr
Match NameE-valueIdentityDescription
gi|659085534|ref|XP_008443470.1|2.3e-10794.36PREDICTED: zinc finger AN1 domain-containing stress-associated protein 12 [Cucum... [more]
gi|778685708|ref|XP_011652261.1|1.1e-10491.79PREDICTED: zinc finger AN1 domain-containing stress-associated protein 12 [Cucum... [more]
gi|590645511|ref|XP_007031364.1|3.0e-7570.47Zinc finger family protein [Theobroma cacao][more]
gi|595974373|ref|XP_007217767.1|5.6e-7469.79hypothetical protein PRUPE_ppa011876mg [Prunus persica][more]
gi|645249255|ref|XP_008230667.1|6.2e-7369.27PREDICTED: zinc finger AN1 domain-containing stress-associated protein 12 [Prunu... [more]
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: Molecular Function
TermDefinition
GO:0008270zinc ion binding
Vocabulary: INTERPRO
TermDefinition
IPR000058Znf_AN1
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0008150 biological_process
biological_process GO:0071229 cellular response to acid chemical
biological_process GO:1901701 cellular response to oxygen-containing compound
biological_process GO:0009755 hormone-mediated signaling pathway
biological_process GO:0009628 response to abiotic stimulus
biological_process GO:0009753 response to jasmonic acid
biological_process GO:0014070 response to organic cyclic compound
biological_process GO:0006950 response to stress
biological_process GO:0001101 response to acid chemical
biological_process GO:0009725 response to hormone
biological_process GO:1901700 response to oxygen-containing compound
biological_process GO:0007165 signal transduction
cellular_component GO:0005575 cellular_component
molecular_function GO:0008270 zinc ion binding
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Lsi03G014280.1Lsi03G014280.1mRNA


InterPro
Analysis Name: InterPro Annotations of Lagenaria siceraria
Date Performed: 2017-09-18
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR000058Zinc finger, AN1-typeGENE3DG3DSA:4.10.1110.10coord: 15..56
score: 1.7E-9coord: 86..141
score: 2.
IPR000058Zinc finger, AN1-typePFAMPF01428zf-AN1coord: 17..55
score: 1.7E-11coord: 104..142
score: 3.
IPR000058Zinc finger, AN1-typeSMARTSM00154AN1_Zf_4coord: 17..56
score: 1.0E-4coord: 104..145
score:
IPR000058Zinc finger, AN1-typePROFILEPS51039ZF_AN1coord: 14..60
score: 7.63coord: 101..154
score: 8
NoneNo IPR availablePANTHERPTHR14677ARSENITE INDUCUBLE RNA ASSOCIATED PROTEIN AIP-1-RELATEDcoord: 4..140
score: 5.1
NoneNo IPR availablePANTHERPTHR14677:SF2AN1-TYPE ZINC FINGER PROTEIN 1coord: 4..140
score: 5.1
NoneNo IPR availableunknownSSF118310AN1-like Zinc fingercoord: 10..57
score: 1.83E-11coord: 64..145
score: 2.3

Synteny
The following gene(s) are orthologous to this gene:
GeneOrthologueOrganismBlock
Lsi03G014280Csa3G829160Cucumber (Chinese Long) v2culsiB186
Lsi03G014280CSPI03G39570Wild cucumber (PI 183967)cpilsiB184
Lsi03G014280Cucsa.339380Cucumber (Gy14) v1cgylsiB551
Lsi03G014280CmaCh14G006280Cucurbita maxima (Rimu)cmalsiB242
Lsi03G014280CmoCh14G006380Cucurbita moschata (Rifu)cmolsiB230
Lsi03G014280Cla017055Watermelon (97103) v1lsiwmB240
Lsi03G014280MELO3C009923Melon (DHL92) v3.5.1lsimeB260
Lsi03G014280ClCG10G014550Watermelon (Charleston Gray)lsiwcgB219
Lsi03G014280MELO3C009923.2Melon (DHL92) v3.6.1lsimedB273
Lsi03G014280Cla97C10G197410Watermelon (97103) v2lsiwmbB218
Lsi03G014280Bhi11G002562Wax gourdlsiwgoB300
Lsi03G014280Cp4.1LG03g07660Cucurbita pepo (Zucchini)cpelsiB503
Lsi03G014280CsGy3G037140Cucumber (Gy14) v2cgyblsiB171
Lsi03G014280Carg09747Silver-seed gourdcarlsiB394
Lsi03G014280CsaV3_3G042030Cucumber (Chinese Long) v3cuclsiB203
The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:
GeneOrganismBlock
Lsi03G014280Bottle gourd (USVL1VR-Ls)lsilsiB133
Lsi03G014280Cucumber (Gy14) v1cgylsiB338
Lsi03G014280Cucurbita maxima (Rimu)cmalsiB119
Lsi03G014280Cucurbita maxima (Rimu)cmalsiB658
Lsi03G014280Cucurbita moschata (Rifu)cmolsiB107
Lsi03G014280Cucurbita moschata (Rifu)cmolsiB647
Lsi03G014280Wild cucumber (PI 183967)cpilsiB047
Lsi03G014280Cucumber (Chinese Long) v2culsiB045
Lsi03G014280Melon (DHL92) v3.5.1lsimeB255
Lsi03G014280Watermelon (Charleston Gray)lsiwcgB216
Lsi03G014280Watermelon (Charleston Gray)lsiwcgB247
Lsi03G014280Watermelon (97103) v1lsiwmB236
Lsi03G014280Watermelon (97103) v1lsiwmB281
Lsi03G014280Cucumber (Gy14) v2cgyblsiB043
Lsi03G014280Melon (DHL92) v3.6.1lsimedB268
Lsi03G014280Cucumber (Chinese Long) v3cuclsiB049
Lsi03G014280Watermelon (97103) v2lsiwmbB240
Lsi03G014280Watermelon (97103) v2lsiwmbB252
Lsi03G014280Wax gourdlsiwgoB313