CmoCh14G006380 (gene) Cucurbita moschata (Rifu)
The following sequences are available for this feature:
Legend: CDSexonthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.ATGGCAATGCTCACATGGAAGAAGATACGCCAGACAATGATTGAACAGGCAAGTAAGTTTATCGATAGCATGGATCTTTTTGGTTGATTTTGCATATAATCTTTTTACACCTTTTATTATCCTGCCTCAATGTTGGTGCAAGAAAGAATAGTTTAGAACTTTGAATTGTGGTAGTAACCTTTTGCTTCAAGCAAAAGAGCTTGAAGACCAGCAAAGCATCAATGCTGATGAATATCTGTTTTTTAGCATATTGTTGAAAAATGTACATACTTCCTCCTTTTCATGCATGTTCTTTTTGATTGCTTGTTAGACTTTTCTGCTTGGTTGTCTCTTCCAGCCATCTGTTTCCATATGCATCATTTGTTGAGCTGGAATTTCTCTGACCTGAAAAATCATTAGTTTTGGAAGTTCATGGAGTCTATACATTCATTCTTTATTCTCCATCATTATTTTTTTAGTTTGCCTCAAATGGTTTAAGGTCAAGAAGTATTGATGAGCCAGATGGGTTTTATGTATTTTAAAAAGATCTATTATTTGTCTAAGCTTTCAAGGCTATGGTGGGGGAAGAGCTTAGTTTGAATTTTTTAATAAATTTATACCAGTGATTGCTTGCTACTTGTTTCGTAGTTTATTAACTAAATCTAGATCAAGTTTGGAAGAAAAATGCATTTGATTTGATTTGAAAATAGTGTCAAGTCAAGCTGAGGTTTAGTTGATTTGATTTGATGTTAGAAACTTACTTGGTTCTTGTTAAGTTAAGATTTACATGTGGGTTCAAATTATTATGATGATCAATTATGACTTAAATGGATGAAAAGTAGACCAAAAGTTGGTGGATAATTTTGCTCCTTGTATTATTAAACAATAAGAAATTTATTGTTTAATAATGCTATATTAGCTGAAATAATGGAACAATAACAGCTTCATCTCTCATCATGTATCAATGTAATGCAAAGTAGCAGCATTGCAAATCTTCTTCTAGGTCGATGAATTGTGAGAATGCATATTAAATAATATTAATTTTTATTTTTTTTCGAAAGCCCCTTCACCCAATCGGAGAAAGCTACGCGTTTACACCGCGTAGGATTCGGAAGAAGGAATCTCCGCCGCCGTTCATCCAGAGGTTTCTAATTTTCTTCTAAAATAGTTTCCAATTCCTTAACTTTCTTCTCAAGTCAACTCGAATCCTATAAATAGCCCAAATTTCATCATAATCTTCTCCTCCTCTAACATCTAACAAACCAAATTTGCAACCACAATTTCATCTCTATTTCTAATCCTTTTTTTCAGTTCCAAATCAGAAGACCTTCCGACGAAGAAACCACCATGGCCGCCGCTGGAGGAACAGAGGCTTTCCCTGATCTTGGCCGCCACTGCCAGCACTCCGATTGCCACCAACTCGATTTCCTTCCGTTCACCTGCGACGGTTGCCAAAAGGTCTCATCCCCAATTCCCAATTCTTGTTTCTCTAGGATTTGTTTATCTCTGGTTTCAGTTTTTGAGATTTTTTTATTCTGAAAATTGTTTGAATTTGTAGGTGTTCTGTTTGGAGCATCGCAGTTTCAAATCCCACGACTGCCCGAAATCTGATCGGAACAGTAGAAAAGTTGTGGTCTGTGAAATCTGCTCGATGTCGATCGAGACCACCGGGAAGGACGGCGACGAGAGCAGGATTTTGGAGAGGCATCACGAATCAGGAGATTGCGATCCAAGGAAGAAGAAAAAGCCCACTTGTTCAGCGAGGCGGTGCCGGGAAATTCTTACGTTTTCCAATACTTGTGTGTGTAAAACCTGCCGTTTGAAGGTGTGTTTGAAGCACCGGTTTCCGGCGGAGCATAATTGTGGACGGGTGGATACAGGGCGGTGGAATGAGAAGTTTATGGCGGCTTTGGAATTGAGGAACGGCGGCGATTGTGGGAAAAGGGGACGTCCGACGGCGGCTAATGGGTCTTCCCCATCTGTTAAAGCTTGTTGATTGCTTTCTAGAGGGAAATTAATTTATGAACCATTAGATTTTGGTCGCTGTTCCTCCATTCTGTTCTTATAAAGAATGGTCATAAATTTCAACCCCTCTTTCTAAAAGTACTTGTCTTAATAAAATAAAAATAAATACTATTAAAGCTGACCTTACTATTAAATTATACCAGTAATACCATTAAATCTTCTACAACAATCCCCCATTTTAGCTCCCTATGGATTGTGCTTCATTTTTATTTTG ATGGCAATGCTCACATGGAAGAAGATACGCCAGACAATGATTGAACAGTTCCAAATCAGAAGACCTTCCGACGAAGAAACCACCATGGCCGCCGCTGGAGGAACAGAGGCTTTCCCTGATCTTGGCCGCCACTGCCAGCACTCCGATTGCCACCAACTCGATTTCCTTCCGTTCACCTGCGACGGTTGCCAAAAGGTGTTCTGTTTGGAGCATCGCAGTTTCAAATCCCACGACTGCCCGAAATCTGATCGGAACAGTAGAAAAGTTGTGGTCTGTGAAATCTGCTCGATGTCGATCGAGACCACCGGGAAGGACGGCGACGAGAGCAGGATTTTGGAGAGGCATCACGAATCAGGAGATTGCGATCCAAGGAAGAAGAAAAAGCCCACTTGTTCAGCGAGGCGGTGCCGGGAAATTCTTACGTTTTCCAATACTTGTGTGTGTAAAACCTGCCGTTTGAAGGTGTGTTTGAAGCACCGGTTTCCGGCGGAGCATAATTGTGGACGGGTGGATACAGGGCGGTGGAATGAGAAGTTTATGGCGGCTTTGGAATTGAGGAACGGCGGCGATTGTGGGAAAAGGGGACGTCCGACGGCGGCTAATGGGTCTTCCCCATCTGTTAAAGCTTGTTGATTGCTTTCTAGAGGGAAATTAATTTATGAACCATTAGATTTTGGTCGCTGTTCCTCCATTCTGTTCTTATAAAGAATGGTCATAAATTTCAACCCCTCTTTCTAAAAGTACTTGTCTTAATAAAATAAAAATAAATACTATTAAAGCTGACCTTACTATTAAATTATACCAGTAATACCATTAAATCTTCTACAACAATCCCCCATTTTAGCTCCCTATGGATTGTGCTTCATTTTTATTTTG ATGGCAATGCTCACATGGAAGAAGATACGCCAGACAATGATTGAACAGTTCCAAATCAGAAGACCTTCCGACGAAGAAACCACCATGGCCGCCGCTGGAGGAACAGAGGCTTTCCCTGATCTTGGCCGCCACTGCCAGCACTCCGATTGCCACCAACTCGATTTCCTTCCGTTCACCTGCGACGGTTGCCAAAAGGTGTTCTGTTTGGAGCATCGCAGTTTCAAATCCCACGACTGCCCGAAATCTGATCGGAACAGTAGAAAAGTTGTGGTCTGTGAAATCTGCTCGATGTCGATCGAGACCACCGGGAAGGACGGCGACGAGAGCAGGATTTTGGAGAGGCATCACGAATCAGGAGATTGCGATCCAAGGAAGAAGAAAAAGCCCACTTGTTCAGCGAGGCGGTGCCGGGAAATTCTTACGTTTTCCAATACTTGTGTGTGTAAAACCTGCCGTTTGAAGGTGTGTTTGAAGCACCGGTTTCCGGCGGAGCATAATTGTGGACGGGTGGATACAGGGCGGTGGAATGAGAAGTTTATGGCGGCTTTGGAATTGAGGAACGGCGGCGATTGTGGGAAAAGGGGACGTCCGACGGCGGCTAATGGGTCTTCCCCATCTGTTAAAGCTTGTTGA
BLAST of CmoCh14G006380 vs. Swiss-Prot
Match: SAP12_ARATH (Zinc finger AN1 domain-containing stress-associated protein 12 OS=Arabidopsis thaliana GN=SAP12 PE=2 SV=2) HSP 1 Score: 235.3 bits (599), Expect = 5.9e-61 Identity = 111/186 (59.68%), Postives = 134/186 (72.04%), Query Frame = 1
BLAST of CmoCh14G006380 vs. Swiss-Prot
Match: SAP17_ORYSJ (Zinc finger AN1 domain-containing stress-associated protein 17 OS=Oryza sativa subsp. japonica GN=SAP17 PE=2 SV=1) HSP 1 Score: 185.3 bits (469), Expect = 7.0e-46 Identity = 87/174 (50.00%), Postives = 106/174 (60.92%), Query Frame = 1
BLAST of CmoCh14G006380 vs. Swiss-Prot
Match: SAP13_ARATH (Zinc finger AN1 and C2H2 domain-containing stress-associated protein 13 OS=Arabidopsis thaliana GN=SAP13 PE=2 SV=1) HSP 1 Score: 146.0 bits (367), Expect = 4.7e-34 Identity = 65/138 (47.10%), Postives = 85/138 (61.59%), Query Frame = 1
BLAST of CmoCh14G006380 vs. Swiss-Prot
Match: SAP11_ARATH (Zinc finger AN1 and C2H2 domain-containing stress-associated protein 11 OS=Arabidopsis thaliana GN=SAP11 PE=2 SV=1) HSP 1 Score: 145.2 bits (365), Expect = 8.0e-34 Identity = 75/177 (42.37%), Postives = 94/177 (53.11%), Query Frame = 1
BLAST of CmoCh14G006380 vs. Swiss-Prot
Match: SAP16_ORYSJ (Zinc finger AN1 and C2H2 domain-containing stress-associated protein 16 OS=Oryza sativa subsp. japonica GN=SAP16 PE=2 SV=2) HSP 1 Score: 140.2 bits (352), Expect = 2.6e-32 Identity = 63/138 (45.65%), Postives = 83/138 (60.14%), Query Frame = 1
BLAST of CmoCh14G006380 vs. TrEMBL
Match: A0A0A0LHV5_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_3G829160 PE=4 SV=1) HSP 1 Score: 330.5 bits (846), Expect = 1.5e-87 Identity = 159/195 (81.54%), Postives = 167/195 (85.64%), Query Frame = 1
BLAST of CmoCh14G006380 vs. TrEMBL
Match: M5X0H0_PRUPE (Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa011876mg PE=4 SV=1) HSP 1 Score: 280.4 bits (716), Expect = 1.8e-72 Identity = 129/189 (68.25%), Postives = 150/189 (79.37%), Query Frame = 1
BLAST of CmoCh14G006380 vs. TrEMBL
Match: A0A061EBC4_THECC (Zinc finger family protein OS=Theobroma cacao GN=TCM_016812 PE=4 SV=1) HSP 1 Score: 279.3 bits (713), Expect = 4.0e-72 Identity = 130/189 (68.78%), Postives = 149/189 (78.84%), Query Frame = 1
BLAST of CmoCh14G006380 vs. TrEMBL
Match: I3SH14_MEDTR (Uncharacterized protein OS=Medicago truncatula GN=MTR_6g008210 PE=2 SV=1) HSP 1 Score: 271.6 bits (693), Expect = 8.3e-70 Identity = 127/192 (66.15%), Postives = 148/192 (77.08%), Query Frame = 1
BLAST of CmoCh14G006380 vs. TrEMBL
Match: B9RUF8_RICCO (Arsenite inducuble RNA associated protein aip-1, putative OS=Ricinus communis GN=RCOM_0852510 PE=4 SV=1) HSP 1 Score: 270.0 bits (689), Expect = 2.4e-69 Identity = 125/189 (66.14%), Postives = 148/189 (78.31%), Query Frame = 1
BLAST of CmoCh14G006380 vs. TAIR10
Match: AT3G28210.1 (AT3G28210.1 zinc finger (AN1-like) family protein) HSP 1 Score: 235.3 bits (599), Expect = 3.3e-62 Identity = 111/186 (59.68%), Postives = 134/186 (72.04%), Query Frame = 1
BLAST of CmoCh14G006380 vs. TAIR10
Match: AT3G57480.1 (AT3G57480.1 zinc finger (C2H2 type, AN1-like) family protein) HSP 1 Score: 146.0 bits (367), Expect = 2.7e-35 Identity = 65/138 (47.10%), Postives = 85/138 (61.59%), Query Frame = 1
BLAST of CmoCh14G006380 vs. TAIR10
Match: AT2G41835.1 (AT2G41835.1 zinc finger (C2H2 type, AN1-like) family protein) HSP 1 Score: 145.2 bits (365), Expect = 4.5e-35 Identity = 75/177 (42.37%), Postives = 94/177 (53.11%), Query Frame = 1
BLAST of CmoCh14G006380 vs. TAIR10
Match: AT5G48205.1 (AT5G48205.1 zinc ion binding) HSP 1 Score: 66.6 bits (161), Expect = 2.0e-11 Identity = 38/109 (34.86%), Postives = 46/109 (42.20%), Query Frame = 1
BLAST of CmoCh14G006380 vs. NCBI nr
Match: gi|659085534|ref|XP_008443470.1| (PREDICTED: zinc finger AN1 domain-containing stress-associated protein 12 [Cucumis melo]) HSP 1 Score: 337.0 bits (863), Expect = 2.3e-89 Identity = 163/195 (83.59%), Postives = 169/195 (86.67%), Query Frame = 1
BLAST of CmoCh14G006380 vs. NCBI nr
Match: gi|778685708|ref|XP_011652261.1| (PREDICTED: zinc finger AN1 domain-containing stress-associated protein 12 [Cucumis sativus]) HSP 1 Score: 330.5 bits (846), Expect = 2.2e-87 Identity = 159/195 (81.54%), Postives = 167/195 (85.64%), Query Frame = 1
BLAST of CmoCh14G006380 vs. NCBI nr
Match: gi|595974373|ref|XP_007217767.1| (hypothetical protein PRUPE_ppa011876mg [Prunus persica]) HSP 1 Score: 280.4 bits (716), Expect = 2.6e-72 Identity = 129/189 (68.25%), Postives = 150/189 (79.37%), Query Frame = 1
BLAST of CmoCh14G006380 vs. NCBI nr
Match: gi|590645511|ref|XP_007031364.1| (Zinc finger family protein [Theobroma cacao]) HSP 1 Score: 279.3 bits (713), Expect = 5.7e-72 Identity = 130/189 (68.78%), Postives = 149/189 (78.84%), Query Frame = 1
BLAST of CmoCh14G006380 vs. NCBI nr
Match: gi|645249255|ref|XP_008230667.1| (PREDICTED: zinc finger AN1 domain-containing stress-associated protein 12 [Prunus mume]) HSP 1 Score: 277.3 bits (708), Expect = 2.2e-71 Identity = 128/189 (67.72%), Postives = 149/189 (78.84%), Query Frame = 1
The following BLAST results are available for this feature:
The following terms have been associated with this gene:
GO Assignments
This gene is annotated with the following GO terms.
The following mRNA feature(s) are a part of this gene:
Analysis Name: InterPro Annotations of Cucurbita moschata
Date Performed: 2017-05-19
The following gene(s) are orthologous to this gene:
The following gene(s) are paralogous to this gene: None The following block(s) are covering this gene: |