Lsi04G012120 (gene) Bottle gourd (USVL1VR-Ls)

Overview
NameLsi04G012120
Typegene
OrganismLagenaria siceraria (Bottle gourd (USVL1VR-Ls))
DescriptionInositol-1,4,5-trisphosphate 5-phosphatase 4 isoform 2
Locationchr04 : 18681480 .. 18689152 (-)
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGCTTCTTCTTCTTTTCAATCTTCTTGTTCTTTGATTCTCAGAACTATTTTTCTTATTTCGATAGCCGGGTTTTTTCTTGTATCGCAATCAGAGGCCCTGAAATCGCCGTTTTCCCCTCGTGATGTGCTTCCATTACTACCAAGAAAGGTCTCGTGGCGGATTATGAACTATTTCAATAGCGCTGCTGATCTTCTTCCAGCTTTCGTCGGAGCTGTCTCATCCCCCGAAAAATCTGTTCAGTGGCAAGGGGCTTGCTTCTATAAGAACACTGCTTGGCTGGAGTTCCATAACAAGTCTGGCTCTCAATATGGGGGTGGTACTCTTCATATAAAGGTATGTATATGTATTAGACTTGACAATAAGTAAAGCTAATTCTCCATGGAACTGATGGAGTTAACTAACAAAACAGAAAGTAATGATGGTTCTAAGTAATTCTCAATGGACCAATTAAAAATCAGACTCAAACATCAATGAACAAAGATGAAACATGTCATTTTTGAAATTCTAAGGACTAAATAAAAATTGAATTCAAATATCATTGTTAGGGGTTATTGGCCGGTTCAACTTAAAATTGGTAGAGTGGGTTATTAGATGATATGATATTAAATTTGTCTTCACACATGAGCTTAAACTTTTGGGTCAATTGATGATTTAAGATGGACTACTATGTGTGCAGCTACAAATATAATATAATAGTGGAATTTACAACTATTTATAACGTACAATTATCTACAATAATATTATTTAAAATTTTTATTTGTTACAATGTTTACTGTTTGCTACCCATACTAAAATAGTATGCACTCCAAACACAGACTATTATAACCCAGACTAAAATAATTTGCACTTCAAACACAGAATAGCATCATCCCACATATTATATAATATCACTGATTATAATAACGAACTCAACATCTCAAACATCTCCTTAATTTTTACTTAGAAATTGAATAACTAAATGAAATTTAAGTTTAAATCTCAAATATAAAGTGTATTTTACCATAAAAAAAATAATAGTTTTCAAAAAACTGCAAACTAATATAAATCAAAATACATTTGTTAGTTGGTTATTATAGGTATGTTATAACAAAATATTACATAAACATAAGGGGAATTATTATAAAGGTAAAAAATATCAAATTATTTACAAATAAATTTTTTTTACTGTCTATTCGAGATAGACCCGATAGACTTCTATCACTAAGCGATAGAAGTCTATCGTTGTCTATCGTCCAGTGATAGAGACAGTGAAATTTTTTTATATTTGTAAATAGTTTGATATTATTTTCATTTTTGAAAATAACTCTAAAAATAATGATTCTTAAGGAAAATTACTATAAACATAAAAAAGTATCAAACTATTTACAAATATAGAAAAATTTCAGTGTCTATCAGTGATAGACTGCGATAGATGGTAAATTTTTTCTATATTTGTAAATAGTTTAACTTATTTTTCTATATTTGAAAACATTGATTAGTTCAATTTATAAAATTTAACTGGATGATTCTTATGATTATGGTTACAGTTAATGATCGCAATCTAAATTAATGAACATATATGAAAACAACTACAAAATTTATATGAGTCACCATAATTTAAGTTAGTAATTTATTTATAAATTTAAATTCTATGTTAAGTAAATATTTTTTTTTAGAAAAGGTATATTTGTAACTAGTTTAATTAAGAATATATATATATATATATATATATAACTACCCATTTAAATTTATTTTTAGTAAAAATCATCAATTAATTAACTATTTTAAAAGGAAGAATTAAAGGAAAAAAACTATAAACTATTTTTTCAAACATTTATTTCTTCATATTATAGCTGTTTTTTTTAAAGCGCAGTTGTAACCAATTATTTTAAAAGCTAGAATAATTCCAAATCAAGTCTATCATGATTTGAACAGCATAATTGTTTTTTCTCGATAATATTGAAGTAATGAGAACTTTTAGGTCATTTTAAATTGCAACATTTATCCAATTAAGTTTTTGATGTAATAATTTAATAAAATTAAAAGTTTATGGTTAAAATTGATAAGTGGAGAATCAAAATTGATATATTTTTTTCCTAGAAATTTTATTAGGATTTTAACAAATAATTAATAGAAATGGGTTTATATATATGCAGGTTAGCAATGCTCATAGTCCGACGTGTATGGATGTTTATATATTTGCAACTCCATACCGTTGGACGTGGGATAACTATTTCCTGTCCAGAGAGCATACTCTTGAGTTGCCACAATGGCAAGGAAAGGAGGAATTTGAATATGTAAGCTCTCGTTCGATAAATCATTTAGGTCTTGTTCGATAATTATAAAGGTATCTTATTGGATTATCCATTTTGCTTCTTTTAGTTTGAATTTATATTTGTTTTCTTTTAGTTTCTCTATTATAGTTTTTATCTAATTCCAAGTTTTAGTCCAATCCTAAAAATAAAAACATGGTTTTGAAAATTAATATTATTATTATTTTTTATTTTTAGTTTTCAAAATTTGACTTGATTTTTGAAAATTTGAGCGGAAGTGGATGTCAAAACGTAAAGATTTATGAGTGAAAGTAGAGTTTATAAAATTAATTTTTTAAAATCCAAAACAAAAAATTAAATGGTTATCAAATGAGTCTTTGTTTTTTATTTTCCATTTATGAAAATTAATTTGATAAATACCATTTCCTTTTCCTTTAGTTTTCTTGTTCTATTTACCTACTTTTTAAATCATTTTAAAAAACTTGCCATAGTTTGAAAACTAATTAAAAACAAAATGAAAAACAAAATGTCAAACTATTTAGAGAAAATAACAAATTAAAAAATACGGATAGACAATGAAAGACTTCTATCATCATCTATCAGTGATAGACTTCTATCATTTCTATCACTGATAGACCTTGATAAAATCTATCCGTGTCTATCATAAATATCTAAAACTTTTGTTATTTTGTGTAAATAGTTTTATTTATTTTTTTATTTTTTAAAATTCTCTAAATGGGAGAGAAAACCATATGTGAATTTTGGAAAACACACTACAACAAATTAGGCCTTTAGCGTCGGTCCAAAAAATTGGACACGGATCTTTAATGTCAGGCCAAGTAAAAAAAAAACGGATCTTTACTGTCAGTTTTAGACTGACATTAAAGATACATTAAAATAGATCTTTAATGTCGATTCTCGACTGACATTAAAGATCCTCCAAAATAATTTTCCAAATTTAATCTTCTTTTTGTGAAGATTCAAAATGCTCTCTCTCACACACTTCAACATATTTTTCTCTCAAATAGGGTTTGAGCTCGTGGTCGCCGCCGCTGTCCAACCATCACCGTTCAGCCATTGCCGTCGCGTGGAGCAGCAGTGGGTCGTCTTGCAGTCGCGTGGGCCGTCGATTCTCGTGGAAAATCCTTTCCCTCTTTTTTAATTTTTCACTTGCGACAACGGAATGTGTCCACACACATCTCTATCTTCTTTACCTGTATCTCAACACAGTCCCGTTTTCCCATCCTTACCCCCGTTTTGTACAGTAATTTCGAAACTACCACTGACTTTGCCTTCAGCTTCAACCCCTTTAACCCTTTTTTTTGATTGTGCCAACACAAGGCTACGTTTTGGTATCTAGAAGACACTGATCGTGCCATTTCACAAAACTTGCAGCCTACCTGTTTGTGAAAATGCCTCAATGGGCTGCAACATTCTGGTTGACACTGCTTGGATGTTTCTTCCTCTTTTTTCCCCCATATATCGCATTCTTCTTTGCTTCTTTGTTGCTTTGCCACTTTTTCTCTAGATTTTTGTTTGTTTCCCCCAAATATACCCATCAACTAATTGTTAAATCCATTGCCAATTGATGATTGAAAATTAGTTCTATGTTTGGTTTAAGTTGGTGGGTTTAAGATTGACTTTCTTGTTTAGCATAATTAGCATTGAAAAATTTGATTGTTTTTTTTTTTTTTTTTGTTTTGTGTAGTTTTCTCAGCAGTTTCTGGACTTGAGTTATCCATGTCCGAGGCTCACCATCAGTGTAAGCACCTTGACTTTAAACATCTTTATTAGTTGTCTTATGGAACATTTGACTCATACTATTCAAAATGACATCCTTTACTATAATTGCAAAGACCTCTCAGGCGGAAAATTTTGAGTGTTTAGACCTTTTGCTGCCTAAAATGTAACTTGAAGACTCTCTGGTGGTGATATGATTGAATTGTCTTACTAATGAGATATAATTTACTTTCCTTGTCTCTATCTCTCTCCACGTCTATATGAAAACTAAATTAGTAATGCTTTCCTCTTGCAAGGTAGAGATTGTGATAAGAGTTTCAAGAAGTATAGTGCTAATAATATTAAGGATATCATCCCTTTCACTCAATCTATCTTCTTCTTTGTTTGGTATTGTGGAAAAGTTCCTTGCATCACCCTCCTATCTGGATCTCATTGTCGCTCAACCTTAAAGGTTCTTTTGGTTAAGATTTAGAGGCTAATGTTACTCTAAATTCCTTTCGGACTAAATTAGAGTGTTTTTGAATTGTCCCTAACAGTTGTAAACTCTTGTTTGTGGATTCAGACTAGTTTTGGACTCTTCAAACTCGTTCCAGTAAAGACCCTAGCCTTTTTGGTAAGATATTTAAGTGGTAATGTTTTGTTTAGACTTTTCAGTTTTATTTTAAGTGTTGTAATTTAATTTATAACCTTTGGAGCTCTATTTGTAGATAGGTAAGTTTTAATTTAGAGCTTTATTTGATATATTTTTAATATACTCAATTTTATATACTTAAGTAAGTATATCTTCTTTGTAGATTGTTTAGTAAGTAACAATACTTTGAGTCCCTTCCTAACTCTTTTTAAGGTGTTTTAGATTAGTCTCTAATACTTGTAAGCTCTTGATTGTAGATTCAGAGTATTTTTGGACCCATTCGAACACTTTTTCAGCAAGAATTTATGTTCTTTTAGTGCGTTTTAGGTAGTAAAACTTGATTAAGGTCTTTTTGACTCATTTAAAGTGTTGTAATTTAGTTTATAACTCTATATGGACTCTTTGTTTGTAGTTTGAGACTAACTCAGCGTGTTCCAATTAAGTTTAAAGTCTATTTTGGGTAAGAACATTGATTCTGAATGTTTTTTGAGACATTGAATAATGTTTAAACTAAGTTTTAGTCTTTGAACCTTAGTTTTATCATTTTAGAAGCCTTTCAAATAATTTAGAAGCTCTTTTGACACGCGTAGGTGAGTAGAATTCTACTTCATGGGTCTATTTGTAGAATTTTGTGTCTTTCCTTGTTTTATTGCAGTATGTGATGTACTTTATCAAAATACAACACTATTTTGATGAGTTTTCAATATACTGAATTGTGTAGTATGATGTTTGACTGGGAATGACTAGCATGAATGAAATGTTATTATGTGTTTGTGGTTTCTACTTCAAGGTGGAATGATAGTTTAGGATGTTACCTTATGGCAGTTTAACGATGTTCCCTTATGATAGCTTAGTGATGTTCCCTTATCACTAAAAATTAGTTTAATTAATTACTGTGAATTAAAGATTAACGTAGTGGATTATGAATATGATTAGTGAATTTTTTTTTTTGGTTTGAAATATGAGTCTGTTATCTGAAGTTGAATGGCCAAGCTATAATGATAGTCAAGAAGGAAGTTTTGGATATTTTGGGAGATCAACTATTGGAAGCACAAATTACAAATGTAAATATAAATATTGTGTATTTCAAGTTGATGGTTTATAGAAGCTAAAATCCTCCTAAAAAAAGGTACATAAGACTTTTTAACTAAGCTACAGAGGAAAGGAAAAATTACAAATGTAGTTATTACTGGTAATTTTACTTGTATGCCTAGAAGATATAGTATTGAAGATTTAGTCTAGATTTCTTTTACCGTATTTGTGGGTGTTGTACATCTACTTCAACTATACTAAAAAAGAGTACTTTGTATTCCTTGCAACAACCTCATAGATAAGAAGCTTATGGATTGAAGACTAAGGAACCTAAAGAAACAATGGAGGGTAAACATGTGTACGTAAACAAATAATAGTGTAATTATTAACAAAAGAAATGATTTTGTAGTAGAAGTTGAGAGGGCACTTGTCATATTTTTTTATGCATATTATACACTTGTAGAATAAGTAACATACATTGTTGTTCTTTTTGTGTTATAAAATGAGATTCATACTTTGCTCTTAAAATCAGTTGAAAATGACTTCATGGAAATTTAATATCTATACTTCATCCACCTTAAGAGAAAGGTAGCATTAAATATGGATGAGAGTGGAAAGGACTTTACCCAAATAGGATTTACCATTTCTTTCATTTTTCTTGTTGCAGGATGCTTTCAAAATGTAGTCTCTCATCATAAAAACTCTTCAATTTATAGGTACTCATCTTAATTCTATGAATTTCTAATTAGAATTGTAACATAGAGAATTTTTCTGCAGGTTATAACTCAAATTTTAATCTCCAAGGTAACTTTCATTCCCTTAAACACGATTAGTGCCACAAAGTTTCTAGTTAACTCATTTTAGGTCCTACTCGTATGAGCTTACTATATTGTGAAGATGGTTAGTTGGGGTCTTTGTAAATGTTGGTTCTTAACTATTTCTTTTCATTTGAACCCAAAGACATGGTTAACCATGAATATTATTTATATTTTTATCTTTTTGTTTTTCTTGTTCCTTTTCTTGCACCTTGGCTTGAACATAGTAATTGATTTGATTATTAGTGTCAAATATTTAGTTTCTTGAAATGAAATTATAAGCCAAGGAGAGAAATTGAGTGGGATGTTAATGAAGTCCCTCACATATATTCTCTCTTTGGTATATATATTGACTTCTTTCCTTATGTTGTTAAGTAGAAGCTATTAGGAAGGGAATAGTAACGGTGCAACATCAACTAGCATTCATCATTACGATCTTGCTTGTAGGTAACTTTTGTTATAGTCGAGTTTCAAAAAGTATAGTGCTAATAATATTAAGGATATATCATCCCTTTTAGTCAATCTATCTTCTTCTTTGTTTGGTATTGTGGAAAAGTTCCTTGCATCACCCTCCTATCTAGATCTCATTGTCGCTCAACCTTAAAGGTTCTTTTGGTTAAGATTTAGAGGCTAATGTTACTCTAAATTTCTTTCGGACTAAATTAGAGTATTTTTGAATTGTCTCTAACACTTGTAAACTTTTGTTTGTGGATTCAGACTAGTTTTGGACTCTTCAAACTCGTTCCAGTAAAGACCTTAGCCTTTTTGGTAAGATATTTAGGTGGTAATGTTTTGTTTAGACTTTTCAGTTTTATTTTAAGTGTTGTAATTTAGTTTATAACCTCTGGAGCTCTATTTGTAGATAGGTAAGTTTTAATTTAGAGCTTTATTTGATATATTCTTAATATTCTCAATTTTATTAAGTAAGCATATCTTTTTTGCAGATTGTTTTGTGATAGGACCCTCCAGACAACCAGCTTTCTTGATCTTTAGACTTTAGAACTCTATGTAATATTGATCGTTGTAACTTGTTGATAGGTTTACTTAGTTATTATATATGCTCTGTATTTTATAATTAAGGATCATAACTTGTCTTGTATTTAAAGTTTTGTTTATCTTTGTAAATTGAATGTAGTTTGTAGAGAGACGGATAATCATATTACTTCTATTGGAGTGAATTAGTTAATTGTTGTGCTTGTT

mRNA sequence

ATGGCTTCTTCTTCTTTTCAATCTTCTTGTTCTTTGATTCTCAGAACTATTTTTCTTATTTCGATAGCCGGGTTTTTTCTTGTATCGCAATCAGAGGCCCTGAAATCGCCGTTTTCCCCTCGTGATGTGCTTCCATTACTACCAAGAAAGGTCTCGTGGCGGATTATGAACTATTTCAATAGCGCTGCTGATCTTCTTCCAGCTTTCGTCGGAGCTGTCTCATCCCCCGAAAAATCTGTTCAGTGGCAAGGGGCTTGCTTCTATAAGAACACTGCTTGGCTGGAGTTCCATAACAAGTCTGGCTCTCAATATGGGGGTGGTACTCTTCATATAAAGGTTAGCAATGCTCATAGTCCGACGTGTATGGATGTTTATATATTTGCAACTCCATACCGTTGGACGTGGGATAACTATTTCCTGTCCAGAGAGCATACTCTTGAGTTGCCACAATGGCAAGGAAAGGAGGAATTTGAATATTTTTCTCAGCAGTTTCTGGACTTGAGTTATCCATGTCCGAGGCTCACCATCAGTGTAAGCACCTTGACTTTAAACATCTTTATTAGTTGTCTTATGGAACATTTGACTCATACTATTCAAAATGACATCCTTTACTATAATTGCAAAGACCTCTCAGGCGGAAAATTTTGAGTGTTTAGACCTTTTGCTGCCTAAAATGTAACTTGAAGACTCTCTGGTGGTGATATGATTGAATTGTCTTACTAATGAGATATAATTTACTTTCCTTGTCTCTATCTCTCTCCACGTCTATATGAAAACTAAATTAGTAATGCTTTCCTCTTGCAAGGTAGAGATTGTGATAAGAGTTTCAAGAAGTATAGTGCTAATAATATTAAGGATATCATCCCTTTCACTCAATCTATCTTCTTCTTTGTTTGGTATTGTGGAAAAGTTCCTTGCATCACCCTCCTATCTGGATCTCATTGTCGCTCAACCTTAAAGGTTCTTTTGGTTAAGATTTAGAGGCTAATGTTACTCTAAATTCCTTTCGGACTAAATTAGAGTGTTTTTGAATTGTCCCTAACAGTTGTAAACTCTTGTTTGTGGATTCAGACTAGTTTTGGACTCTTCAAACTCGTTCCAGTAAAGACCCTAGCCTTTTTGGATGCTTTCAAAATGTAGTCTCTCATCATAAAAACTCTTCAATTTATAGGTACTCATCTTAATTCTATGAATTTCTAATTAGAATTGTAACATAGAGAATTTTTCTGCAGGTTATAACTCAAATTTTAATCTCCAAGGTAACTTTCATTCCCTTAAACACGATTAGTGCCACAAAGTTTCTAGTTAACTCATTTTAGGTCCTACTCGTATGAGCTTACTATATTGTGAAGATGGTTAGTTGGGGTCTTTGTAAATGTTGGTTCTTAACTATTTCTTTTCATTTGAACCCAAAGACATGGTTAACCATGAATATTATTTATATTTTTATCTTTTTGTTTTTCTTGTTCCTTTTCTTGCACCTTGGCTTGAACATAGTAATTGATTTGATTATTAGTGTCAAATATTTAGTTTCTTGAAATGAAATTATAAGCCAAGGAGAGAAATTGAGTGGGATGTTAATGAAGTCCCTCACATATATTCTCTCTTTGGTATATATATTGACTTCTTTCCTTATGTTGTTAAGTAGAAGCTATTAGGAAGGGAATAGTAACGGTGCAACATCAACTAGCATTCATCATTACGATCTTGCTTACTAGTTTTGGACTCTTCAAACTCGTTCCAGTAAAGACCTTAGCCTTTTTGATTGTTTTGTGATAGGACCCTCCAGACAACCAGCTTTCTTGATCTTTAGACTTTAGAACTCTATGTAATATTGATCGTTGTAACTTGTTGATAGGTTTACTTAGTTATTATATATGCTCTGTATTTTATAATTAAGGATCATAACTTGTCTTGTATTTAAAGTTTTGTTTATCTTTGTAAATTGAATGTAGTTTGTAGAGAGACGGATAATCATATTACTTCTATTGGAGTGAATTAGTTAATTGTTGTGCTTGTT

Coding sequence (CDS)

ATGGCTTCTTCTTCTTTTCAATCTTCTTGTTCTTTGATTCTCAGAACTATTTTTCTTATTTCGATAGCCGGGTTTTTTCTTGTATCGCAATCAGAGGCCCTGAAATCGCCGTTTTCCCCTCGTGATGTGCTTCCATTACTACCAAGAAAGGTCTCGTGGCGGATTATGAACTATTTCAATAGCGCTGCTGATCTTCTTCCAGCTTTCGTCGGAGCTGTCTCATCCCCCGAAAAATCTGTTCAGTGGCAAGGGGCTTGCTTCTATAAGAACACTGCTTGGCTGGAGTTCCATAACAAGTCTGGCTCTCAATATGGGGGTGGTACTCTTCATATAAAGGTTAGCAATGCTCATAGTCCGACGTGTATGGATGTTTATATATTTGCAACTCCATACCGTTGGACGTGGGATAACTATTTCCTGTCCAGAGAGCATACTCTTGAGTTGCCACAATGGCAAGGAAAGGAGGAATTTGAATATTTTTCTCAGCAGTTTCTGGACTTGAGTTATCCATGTCCGAGGCTCACCATCAGTGTAAGCACCTTGACTTTAAACATCTTTATTAGTTGTCTTATGGAACATTTGACTCATACTATTCAAAATGACATCCTTTACTATAATTGCAAAGACCTCTCAGGCGGAAAATTTTGA

Protein sequence

MASSSFQSSCSLILRTIFLISIAGFFLVSQSEALKSPFSPRDVLPLLPRKVSWRIMNYFNSAADLLPAFVGAVSSPEKSVQWQGACFYKNTAWLEFHNKSGSQYGGGTLHIKVSNAHSPTCMDVYIFATPYRWTWDNYFLSREHTLELPQWQGKEEFEYFSQQFLDLSYPCPRLTISVSTLTLNIFISCLMEHLTHTIQNDILYYNCKDLSGGKF
Homology
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BLAST of Lsi04G012120 vs. TrEMBL
Match: A0A0A0LBE7_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_3G416650 PE=4 SV=1)

HSP 1 Score: 271.6 bits (693), Expect = 8.5e-70
Identity = 121/144 (84.03%), Postives = 138/144 (95.83%), Query Frame = 1 

Query: 16  TIFLISIAGFFLVSQSEALKSPFSPRDVLPLLPRKVSWRIMNYFNSAADLLPAFVGAVSS 75
           ++FLISI GF LVSQSEALK+PFSPRD+LPLLP KVS+RI+NYFNSAADLLP+FVG+VSS
Sbjct: 5   SLFLISIVGFLLVSQSEALKTPFSPRDMLPLLPTKVSYRILNYFNSAADLLPSFVGSVSS 64

Query: 76  PEKSVQWQGACFYKNTAWLEFHNKSGSQYGGGTLHIKVSNAHSPTCMDVYIFATPYRWTW 135
           P+KSVQWQGACFY+NTAWLEFHNKSGSQYGGGTLHIKVS+AHSPTC+D+YIFATPYRWTW
Sbjct: 65  PDKSVQWQGACFYQNTAWLEFHNKSGSQYGGGTLHIKVSDAHSPTCIDLYIFATPYRWTW 124

Query: 136 DNYFLSREHTLELPQWQGKEEFEY 160
           D YF S+EHT++ PQWQGKEE+EY
Sbjct: 125 DFYFFSKEHTMDFPQWQGKEEYEY 148

[Close]
BLAST of Lsi04G012120 vs. TrEMBL
Match: A0A0A0LD40_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_3G416640 PE=4 SV=1)

HSP 1 Score: 250.0 bits (637), Expect = 2.6e-63
Identity = 115/157 (73.25%), Postives = 133/157 (84.71%), Query Frame = 1 

Query: 3   SSSFQSSCSLILRTIFLISIAGFFLVSQSEALKSPFSPRDVLPLLPRKVSWRIMNYFNSA 62
           SSS Q   S I RTI L+S+    L SQ  ALKSPFSP D+LPLLPR+VSW ++NY N+A
Sbjct: 7   SSSSQFFSSFIPRTILLVSVVALLLSSQPHALKSPFSPLDLLPLLPRQVSWPVLNYLNNA 66

Query: 63  ADLLPAFVGAVSSPEKSVQWQGACFYKNTAWLEFHNKSGSQYGGGTLHIKVSNAHSPTCM 122
           ADLLP FVGAV+SP+ S+QWQGACFYKNTAW+EFHNKSGS++GGGTLHIK S+AHS TCM
Sbjct: 67  ADLLPTFVGAVTSPDNSIQWQGACFYKNTAWIEFHNKSGSEFGGGTLHIKASDAHSWTCM 126

Query: 123 DVYIFATPYRWTWDNYFLSREHTLELPQWQGKEEFEY 160
           D+YIFATPYR TWD YFLSREHTLE+ +W+GKEEFEY
Sbjct: 127 DLYIFATPYRITWDYYFLSREHTLEIEEWEGKEEFEY 163

[Close]
BLAST of Lsi04G012120 vs. TrEMBL
Match: A0A068UC57_COFCA (Uncharacterized protein OS=Coffea canephora GN=GSCOC_T00021040001 PE=4 SV=1)

HSP 1 Score: 220.7 bits (561), Expect = 1.7e-54
Identity = 99/138 (71.74%), Postives = 115/138 (83.33%), Query Frame = 1 

Query: 22  IAGFFLVSQSEALKSPFSPRDVLPLLPRKVSWRIMNYFNSAADLLPAFVGAVSSPEKSVQ 81
           I  FF  SQ  ALK PF P DVLP+LPR+VSW IMNY NSA DLLP+FVGA SS   S++
Sbjct: 17  IYAFFFASQLHALKVPFHPLDVLPVLPRRVSWPIMNYLNSAVDLLPSFVGAASSTNNSLE 76

Query: 82  WQGACFYKNTAWLEFHNKSGSQYGGGTLHIKVSNAHSPTCMDVYIFATPYRWTWDNYFLS 141
           W+GACFY+NTAWLEF+NKSGS++GGGTLHIKVS AHS TCMD+YIFATPYR TWD YFLS
Sbjct: 77  WKGACFYENTAWLEFNNKSGSEFGGGTLHIKVSKAHSWTCMDLYIFATPYRVTWDYYFLS 136

Query: 142 REHTLELPQWQGKEEFEY 160
           REHTLE  +W+ ++E+EY
Sbjct: 137 REHTLEFEEWESEQEYEY 154

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BLAST of Lsi04G012120 vs. TrEMBL
Match: A0A0B0MI20_GOSAR (Tryptophan synthase alpha chain OS=Gossypium arboreum GN=F383_22343 PE=4 SV=1)

HSP 1 Score: 219.5 bits (558), Expect = 3.8e-54
Identity = 105/167 (62.87%), Postives = 128/167 (76.65%), Query Frame = 1 

Query: 1   MASSSFQSSCSLILRTIFLISIAGFFLVSQSEALKSPFSPRDVLPLLPRKVSWRIMNYFN 60
           MASSS  SS S  +R   L+    FF  S  +A+KSP  PRDVLPLLPR+VSW I+N  N
Sbjct: 1   MASSS-SSSSSFFVRCFPLLFFFFFFFFSHVQAVKSPIHPRDVLPLLPRQVSWPILNSLN 60

Query: 61  SAADLLPAFVGAVSSPEKSVQWQGACFYKNTAWLEFHNKSGSQYGGGTLHIKVSNAHSPT 120
           SA DLLPAFVG+VSS    V W+GACFY+NTAW+EFHNKSGS++GGGTLHIKVS AHS T
Sbjct: 61  SAIDLLPAFVGSVSSQNHIVSWKGACFYENTAWMEFHNKSGSEFGGGTLHIKVSKAHSWT 120

Query: 121 CMDVYIFATPYRWTWDNYFLSREHTLELPQWQGKEEFEYFSQQFLDL 168
           C+D+Y+FATPYR TWD YFLSREHTLE+ +W+ + E+EY   + + +
Sbjct: 121 CLDLYLFATPYRVTWDYYFLSREHTLEIDKWEDRAEYEYVKNKGISI 166

[Close]
BLAST of Lsi04G012120 vs. TrEMBL
Match: B9I0D5_POPTR (Uncharacterized protein OS=Populus trichocarpa GN=POPTR_0011s14080g PE=4 SV=1)

HSP 1 Score: 216.5 bits (550), Expect = 3.2e-53
Identity = 99/154 (64.29%), Postives = 121/154 (78.57%), Query Frame = 1 

Query: 11  SLILRTIFLISIAGFFLVSQSE-ALKSPFSPRDVLPLLPRKVSWRIMNYFNSAADLLPAF 70
           S  L+TI  IS+  FFL  QS  A+K PF P+D+LPLLPR+VSW I+NY N AADLLP F
Sbjct: 4   SFSLKTILTISLFLFFLTPQSSLAIKVPFHPQDLLPLLPRQVSWPILNYLNGAADLLPTF 63

Query: 71  VGAVSSPEKSVQWQGACFYKNTAWLEFHNKSGSQYGGGTLHIKVSNAHSPTCMDVYIFAT 130
           VGA S+   + +W+GACFY+N AW+EFHNK+GS++GGGTLH+KVS AHS TCMD+Y+FAT
Sbjct: 64  VGAASALNDTGEWKGACFYENRAWMEFHNKTGSEFGGGTLHLKVSKAHSWTCMDIYVFAT 123

Query: 131 PYRWTWDNYFLSREHTLELPQWQGKEEFEYFSQQ 164
           PYR TWD YFLSREHTLE  +W  K E+EY  +Q
Sbjct: 124 PYRVTWDYYFLSREHTLEFKEWDSKAEYEYVKRQ 157

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BLAST of Lsi04G012120 vs. TAIR10
Match: AT5G54870.1 (AT5G54870.1 unknown protein)

HSP 1 Score: 210.3 bits (534), Expect = 1.2e-54
Identity = 99/159 (62.26%), Postives = 121/159 (76.10%), Query Frame = 1 

Query: 1   MASSSFQSSCSLILRTIFLISIAGFFLVSQSEALKSPFSPRDVLPLLPRKVSWRIMNYFN 60
           MASSS  SS S  L +I  I +    +VS +E++KSPF PRD+LP LPR+VSW I+N   
Sbjct: 1   MASSSSSSSSSS-LSSILSIVVVLILIVSTAESVKSPFHPRDLLPHLPRQVSWPILNSLY 60

Query: 61  SAADLLPAFVGAVSSPEKSVQWQGACFYKNTAWLEFHNKSGSQYGGGTLHIKVSNAHSPT 120
            AADLLP F+G  SS   SV W+GACF++NTAWLEFHNKSGS++GGGTLHIK   AHS T
Sbjct: 61  GAADLLPTFIGTASSGNDSVDWKGACFFENTAWLEFHNKSGSEFGGGTLHIKADKAHSWT 120

Query: 121 CMDVYIFATPYRWTWDNYFLSREHTLELPQWQGKEEFEY 160
           CMD+Y+FATPYR TW  YF+SR+HT+E P+W GK E+EY
Sbjct: 121 CMDLYVFATPYRVTWTWYFISRQHTVEFPEWDGKAEYEY 158

[Close]
BLAST of Lsi04G012120 vs. TAIR10
Match: AT4G27020.1 (AT4G27020.1 unknown protein)

HSP 1 Score: 191.0 bits (484), Expect = 7.4e-49
Identity = 90/163 (55.21%), Postives = 117/163 (71.78%), Query Frame = 1 

Query: 1   MASSSFQSSCSLILRTIFLISIAGFFLVSQSEALKSPFSPRDVLPLLPRKVSWRIMNYFN 60
           MA+SS  S C     T+ ++      L++ S   K PF PRD+LPL PR+VSW ++N  N
Sbjct: 1   MAASS--SPCIFFATTLLVL------LLTFSSG-KLPFHPRDLLPLFPRQVSWPVVNSLN 60

Query: 61  SAADLLPAFVGAVSSPEKSVQWQGACFYKNTAWLEFHNKSGSQYGGGTLHIKVSNAHSPT 120
           +A DLLP F+G+ S    +V+W+GACFY+N AWLE +NKSGS++GGGTLHIKV  AHS T
Sbjct: 61  TAVDLLPTFIGSASVRNDAVEWKGACFYENKAWLELNNKSGSEFGGGTLHIKVDKAHSWT 120

Query: 121 CMDVYIFATPYRWTWDNYFLSREHTLELPQWQGKEEFEYFSQQ 164
           CMD+Y+F TPYR TWD YF SREHT+E  +W+GK E+EY  Q+
Sbjct: 121 CMDIYVFVTPYRVTWDWYFASREHTMEFKEWEGKAEYEYVKQK 154

[Close]
BLAST of Lsi04G012120 vs. TAIR10
Match: AT1G70160.1 (AT1G70160.1 unknown protein)

HSP 1 Score: 158.7 bits (400), Expect = 4.1e-39
Identity = 73/147 (49.66%), Postives = 99/147 (67.35%), Query Frame = 1 

Query: 18  FLISIAGFFLVSQSEALKSPFSPRDVLPLLPRKVSWRIMNYFNSAADLLPAFVGAVSSPE 77
           FL+ +   F V   ++LK PFS  DVLP+LPR+VSW ++N F++A DLLP F+G+V+   
Sbjct: 9   FLLCLGLGFCVDLGQSLKVPFSVNDVLPMLPRQVSWPVLNSFHNAVDLLPVFIGSVTPNN 68

Query: 78  KSVQWQGACFYKNTAWLEF--HNKSGSQYGGGTLHIKVSNAHSPTCMDVYIFATPYRWTW 137
            S++W+GACF  N A L+    ++     GGG LH+K S AHS TCMD+Y+FATPYR TW
Sbjct: 69  VSIEWKGACFNGNEARLDITGSDRDVPGLGGGVLHLKTSKAHSLTCMDLYVFATPYRITW 128

Query: 138 DNYFLSREHTLELPQWQGKEEFEYFSQ 163
           D YF +R+HTL    W+ K E EY  +
Sbjct: 129 DYYFSARDHTLNFDSWEEKAELEYVKE 155

[Close]
BLAST of Lsi04G012120 vs. NCBI nr
Match: gi|659109108|ref|XP_008454552.1| (PREDICTED: uncharacterized protein LOC103494942 [Cucumis melo])

HSP 1 Score: 279.6 bits (714), Expect = 4.5e-72
Identity = 130/159 (81.76%), Postives = 144/159 (90.57%), Query Frame = 1 

Query: 1   MASSSFQSSCSLILRTIFLISIAGFFLVSQSEALKSPFSPRDVLPLLPRKVSWRIMNYFN 60
           M  SS  +  ++   ++FLISI GF LVSQSEALK+PFSPRD+LPLLPRKVS RI+NYFN
Sbjct: 1   MHISSISNIPAMASSSLFLISIVGFLLVSQSEALKTPFSPRDMLPLLPRKVSLRILNYFN 60

Query: 61  SAADLLPAFVGAVSSPEKSVQWQGACFYKNTAWLEFHNKSGSQYGGGTLHIKVSNAHSPT 120
           SAADLLP+FVG VSSP++SVQWQGACFYKNTAWLEFHNKSGSQYGGGTLHIKVSNAHSPT
Sbjct: 61  SAADLLPSFVGDVSSPDRSVQWQGACFYKNTAWLEFHNKSGSQYGGGTLHIKVSNAHSPT 120

Query: 121 CMDVYIFATPYRWTWDNYFLSREHTLELPQWQGKEEFEY 160
           CMDVYIFATPYRWTWD+YF SREHTL+ PQWQGKEE+EY
Sbjct: 121 CMDVYIFATPYRWTWDHYFFSREHTLDFPQWQGKEEYEY 159

[Close]
BLAST of Lsi04G012120 vs. NCBI nr
Match: gi|700202839|gb|KGN57972.1| (hypothetical protein Csa_3G416650 [Cucumis sativus])

HSP 1 Score: 271.6 bits (693), Expect = 1.2e-69
Identity = 121/144 (84.03%), Postives = 138/144 (95.83%), Query Frame = 1 

Query: 16  TIFLISIAGFFLVSQSEALKSPFSPRDVLPLLPRKVSWRIMNYFNSAADLLPAFVGAVSS 75
           ++FLISI GF LVSQSEALK+PFSPRD+LPLLP KVS+RI+NYFNSAADLLP+FVG+VSS
Sbjct: 5   SLFLISIVGFLLVSQSEALKTPFSPRDMLPLLPTKVSYRILNYFNSAADLLPSFVGSVSS 64

Query: 76  PEKSVQWQGACFYKNTAWLEFHNKSGSQYGGGTLHIKVSNAHSPTCMDVYIFATPYRWTW 135
           P+KSVQWQGACFY+NTAWLEFHNKSGSQYGGGTLHIKVS+AHSPTC+D+YIFATPYRWTW
Sbjct: 65  PDKSVQWQGACFYQNTAWLEFHNKSGSQYGGGTLHIKVSDAHSPTCIDLYIFATPYRWTW 124

Query: 136 DNYFLSREHTLELPQWQGKEEFEY 160
           D YF S+EHT++ PQWQGKEE+EY
Sbjct: 125 DFYFFSKEHTMDFPQWQGKEEYEY 148

[Close]
BLAST of Lsi04G012120 vs. NCBI nr
Match: gi|778681178|ref|XP_004152029.2| (PREDICTED: uncharacterized protein LOC101212346 [Cucumis sativus])

HSP 1 Score: 271.6 bits (693), Expect = 1.2e-69
Identity = 124/159 (77.99%), Postives = 144/159 (90.57%), Query Frame = 1 

Query: 1   MASSSFQSSCSLILRTIFLISIAGFFLVSQSEALKSPFSPRDVLPLLPRKVSWRIMNYFN 60
           M  SS  +  ++   ++FLISI GF LVSQSEALK+PFSPRD+LPLLP KVS+RI+NYFN
Sbjct: 1   MHISSISNIPAMASSSLFLISIVGFLLVSQSEALKTPFSPRDMLPLLPTKVSYRILNYFN 60

Query: 61  SAADLLPAFVGAVSSPEKSVQWQGACFYKNTAWLEFHNKSGSQYGGGTLHIKVSNAHSPT 120
           SAADLLP+FVG+VSSP+KSVQWQGACFY+NTAWLEFHNKSGSQYGGGTLHIKVS+AHSPT
Sbjct: 61  SAADLLPSFVGSVSSPDKSVQWQGACFYQNTAWLEFHNKSGSQYGGGTLHIKVSDAHSPT 120

Query: 121 CMDVYIFATPYRWTWDNYFLSREHTLELPQWQGKEEFEY 160
           C+D+YIFATPYRWTWD YF S+EHT++ PQWQGKEE+EY
Sbjct: 121 CIDLYIFATPYRWTWDFYFFSKEHTMDFPQWQGKEEYEY 159

[Close]
BLAST of Lsi04G012120 vs. NCBI nr
Match: gi|659109106|ref|XP_008454551.1| (PREDICTED: uncharacterized protein LOC103494941 [Cucumis melo])

HSP 1 Score: 256.5 bits (654), Expect = 4.1e-65
Identity = 118/158 (74.68%), Postives = 137/158 (86.71%), Query Frame = 1 

Query: 2   ASSSFQSSCSLILRTIFLISIAGFFLVSQSEALKSPFSPRDVLPLLPRKVSWRIMNYFNS 61
           +SSS QS  S I RTI L+S+ GF L SQ  ALKSPFSP D+LPLLPR+VSW ++NY N+
Sbjct: 7   SSSSSQSFSSFITRTILLVSLVGFLLPSQLHALKSPFSPIDLLPLLPRQVSWPVLNYLNN 66

Query: 62  AADLLPAFVGAVSSPEKSVQWQGACFYKNTAWLEFHNKSGSQYGGGTLHIKVSNAHSPTC 121
           AADLLP FVGAV+SP+ S+QWQGACFYKNTAW+EFHNKSGS++GGGTLHIK S+AHS TC
Sbjct: 67  AADLLPTFVGAVTSPDNSIQWQGACFYKNTAWIEFHNKSGSEFGGGTLHIKASDAHSWTC 126

Query: 122 MDVYIFATPYRWTWDNYFLSREHTLELPQWQGKEEFEY 160
           MD+YIFATPYR TWD YFLSREHTLE+ +W+GKEEFEY
Sbjct: 127 MDLYIFATPYRITWDYYFLSREHTLEIAEWEGKEEFEY 164

[Close]
BLAST of Lsi04G012120 vs. NCBI nr
Match: gi|449468498|ref|XP_004151958.1| (PREDICTED: uncharacterized protein LOC101214437 [Cucumis sativus])

HSP 1 Score: 250.0 bits (637), Expect = 3.8e-63
Identity = 115/157 (73.25%), Postives = 133/157 (84.71%), Query Frame = 1 

Query: 3   SSSFQSSCSLILRTIFLISIAGFFLVSQSEALKSPFSPRDVLPLLPRKVSWRIMNYFNSA 62
           SSS Q   S I RTI L+S+    L SQ  ALKSPFSP D+LPLLPR+VSW ++NY N+A
Sbjct: 7   SSSSQFFSSFIPRTILLVSVVALLLSSQPHALKSPFSPLDLLPLLPRQVSWPVLNYLNNA 66

Query: 63  ADLLPAFVGAVSSPEKSVQWQGACFYKNTAWLEFHNKSGSQYGGGTLHIKVSNAHSPTCM 122
           ADLLP FVGAV+SP+ S+QWQGACFYKNTAW+EFHNKSGS++GGGTLHIK S+AHS TCM
Sbjct: 67  ADLLPTFVGAVTSPDNSIQWQGACFYKNTAWIEFHNKSGSEFGGGTLHIKASDAHSWTCM 126

Query: 123 DVYIFATPYRWTWDNYFLSREHTLELPQWQGKEEFEY 160
           D+YIFATPYR TWD YFLSREHTLE+ +W+GKEEFEY
Sbjct: 127 DLYIFATPYRITWDYYFLSREHTLEIEEWEGKEEFEY 163

The following BLAST results are available for this feature:
BLAST of Lsi04G012120 vs. Swiss-Prot
Match NameE-valueIdentityDescription
BLAST of Lsi04G012120 vs. TrEMBL
Match NameE-valueIdentityDescription
A0A0A0LBE7_CUCSA8.5e-7084.03Uncharacterized protein OS=Cucumis sativus GN=Csa_3G416650 PE=4 SV=1[more]
A0A0A0LD40_CUCSA2.6e-6373.25Uncharacterized protein OS=Cucumis sativus GN=Csa_3G416640 PE=4 SV=1[more]
A0A068UC57_COFCA1.7e-5471.74Uncharacterized protein OS=Coffea canephora GN=GSCOC_T00021040001 PE=4 SV=1[more]
A0A0B0MI20_GOSAR3.8e-5462.87Tryptophan synthase alpha chain OS=Gossypium arboreum GN=F383_22343 PE=4 SV=1[more]
B9I0D5_POPTR3.2e-5364.29Uncharacterized protein OS=Populus trichocarpa GN=POPTR_0011s14080g PE=4 SV=1[more]
BLAST of Lsi04G012120 vs. TAIR10
Match NameE-valueIdentityDescription
AT5G54870.11.2e-5462.26 unknown protein[more]
AT4G27020.17.4e-4955.21 unknown protein[more]
AT1G70160.14.1e-3949.66 unknown protein[more]
BLAST of Lsi04G012120 vs. NCBI nr
Match NameE-valueIdentityDescription
gi|659109108|ref|XP_008454552.1|4.5e-7281.76PREDICTED: uncharacterized protein LOC103494942 [Cucumis melo][more]
gi|700202839|gb|KGN57972.1|1.2e-6984.03hypothetical protein Csa_3G416650 [Cucumis sativus][more]
gi|778681178|ref|XP_004152029.2|1.2e-6977.99PREDICTED: uncharacterized protein LOC101212346 [Cucumis sativus][more]
gi|659109106|ref|XP_008454551.1|4.1e-6574.68PREDICTED: uncharacterized protein LOC103494941 [Cucumis melo][more]
gi|449468498|ref|XP_004151958.1|3.8e-6373.25PREDICTED: uncharacterized protein LOC101214437 [Cucumis sativus][more]
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: INTERPRO
TermDefinition
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0008150 biological_process
cellular_component GO:0016021 integral component of membrane
cellular_component GO:0005575 cellular_component
molecular_function GO:0003674 molecular_function
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Lsi04G012120.1Lsi04G012120.1mRNA


InterPro
Analysis Name: InterPro Annotations of Lagenaria siceraria
Date Performed: 2017-09-18
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePANTHERPTHR31354FAMILY NOT NAMEDcoord: 1..159
score: 1.2
NoneNo IPR availablePANTHERPTHR31354:SF0SUBFAMILY NOT NAMEDcoord: 1..159
score: 1.2

Synteny
The following gene(s) are orthologous to this gene:
GeneOrthologueOrganismBlock
Lsi04G012120MELO3C018112Melon (DHL92) v3.5.1lsimeB309
Lsi04G012120Carg12812Silver-seed gourdcarlsiB825
The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:
GeneOrganismBlock
Lsi04G012120Cucurbita maxima (Rimu)cmalsiB026
Lsi04G012120Cucurbita maxima (Rimu)cmalsiB426
Lsi04G012120Cucurbita moschata (Rifu)cmolsiB014
Lsi04G012120Cucurbita moschata (Rifu)cmolsiB414
Lsi04G012120Cucurbita pepo (Zucchini)cpelsiB464
Lsi04G012120Cucurbita pepo (Zucchini)cpelsiB640
Lsi04G012120Wild cucumber (PI 183967)cpilsiB192
Lsi04G012120Cucumber (Chinese Long) v2culsiB194
Lsi04G012120Watermelon (Charleston Gray)lsiwcgB285
Lsi04G012120Watermelon (97103) v1lsiwmB314
Lsi04G012120Cucumber (Gy14) v2cgyblsiB178
Lsi04G012120Melon (DHL92) v3.6.1lsimedB322
Lsi04G012120Silver-seed gourdcarlsiB933
Lsi04G012120Cucumber (Chinese Long) v3cuclsiB211
Lsi04G012120Watermelon (97103) v2lsiwmbB286
Lsi04G012120Wax gourdlsiwgoB395
Lsi04G012120Wax gourdlsiwgoB406