Lsi06G000210 (gene) Bottle gourd (USVL1VR-Ls)

NameLsi06G000210
Typegene
OrganismLagenaria siceraria (Bottle gourd (USVL1VR-Ls))
DescriptionPentatricopeptide repeat protein 65
Locationchr06 : 203219 .. 205343 (-)
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGACTAGGTATGAAAGTCATCAGTTCTAAACTTCCCCTTTATCCAAATTTGAATTTTTTCAAATCCCATTACCACCAAAATCCATTCCTCCATCCTCCCACCTCTCTTAACAGCCTTCTCAATTCTGGCCGAACTTCAAAACATGCCACTCAAATTCATTCCCAACTCATCACCACCGCCTTCCTTTCCCTCCCTTTCCTCTTCAACAACCTCCTCAACTTGTACGCCAAATGTGGCTCTATTGACCAAACCTTGTTGCTCTTCTCCTCAGCCCCGGATGACTCTAAGAACGTTGTCTCTTGGACTTCTCTTATTACCCAATTTGCCCGTTCTAAAAGACCCTTTCAGGCCTTGATTTTCTTTAACCATATGAGGCGTTCTGGGGTTTATCCCAATCATTACACCTTCTCTGCAGTTTTATCTGCTAGCACTGACACTATGGCTTCTGTTCATGGTGATCAGATGCATTCTTTGGTTTGGAAACATGGGTTCCATGCTGAGGTATTTGTTGCCAGTGCATTAGTTGACATGTATGCCAAGTGTTGTGATATGTGCATGGCCGAGAAGGTGTTTGAGGAAATGCCCGTGAGAAACCTTGTGTCGTGGAACTCTATGATTGTGGGGTTCTTGCAGAACAAGCTTTATGATCGGGCCATTCTCTTCTTTAAGTCGCTTCTACTGGAGAGTCTAACTGCTCTTGATGAGGTAAGCTTTTCCAGTGCCTTGAGTGCCTGTGCCAATGTTGGTAACTTGGAGTTTGGGAAACAAGTTCATGGAGTTGCTCTTAAGCTTGGTGTCAGGAATTTGGTTTATATAAATAACTCACTGATTGACATGTATAGTAAATGTGGTTTATTTGACGACGTTGTGAAGTTGTTTTCAAACATTGGAGTTAGAGATGTTGTTACTTGGAACATAATGATCATGGCATGTGTTTATAATGACAATTATGAAGATGCCTGCAATAGTTTTTGGATGATGAGGAGGGAAGGTTTAATACCTGATGAAGCATCATACTCCTCTGTTCTTCATTCATGTGCAAATCTTGCAGCATTATATCAGGGGACACTGATCCACAATCAGATCATACGATCTGGGTTTGTGAAGAATTTATGTGTCGCAAGTTCTTTGATTACGATGTATGCAAAATGCGGCAGCTTGGTAGATGCTTTTCAGATATTTGAAGAGACTGAGGACCGTAATGTGGTTTGTTGGACAGCCATAATTACAGCTTGTCAACAACACGGCCATGCTAACCGGGTTGTTGAGTTATTCGAGCAAATGTTGAGAGAGGGGATTAAACCCGACTATATTACTTTTGTTTCTGTTCTCTCTGCTTGCAGCCACACTGGTCGGGTGCAAGAAGGATTCTTCTACTTTAATTCAATGATTAAAGTGCATGGTATCTACCCTGGATATGAACATTATGCGTGTATAGTTGACTTGCTTGGTCGTGCTGGGCAGTTGGATAGAGCTAAGATGTTTATAGGACTGATGCCTATCAAACCAGATGCCTCAGTATGGGGTGCTCTGCTCAGTGCTTGCAGGAATCATAGCAACCTTGAAATGGGTAAGGAAGTCGCTCTGGAACTTTTTGATTTGGAACCAGATAATCCTGGAAATTATGTGCTGCTTTGTAACATCTTGACGCGTAATGGGATGTTAAATGAGGCTGATGAGGTTAGAAAAAAGATGGAAACCATTGGGGTGAGGAAAGAACCAGGATGCAGCTGGATTGACATAAAGAATTCAACATTTGTATTTACAGTGCATGATAAGTCACATGAGAAAACGCAGGAGATCTATGAAATGTTGGAAAAGCTACGGGAGTTAGTAAAGAAGAAGGGGTATGTGGCTGAAACTGAATTTGCAATAAACATTGCAGAAGCATACAAGGAGCAAAGTTTGTGGTACCATAGTGAGAAACTAGCTCTTGCATTTGGGCTGCTGACCCTTCCTGCTGGGACTCCAATTAGGATAAAAAAGAATCTAAGAACGTGCGGAGATTGTCATACCGTGATGAAGTTTGCTTCAGAAATTTTTGCACGAGAGATTATAGTAAGAGATATTAGCAGATTCCACCACTTCACCAATGGCATTTGTTCCTGTAAAGATTACTGGTGA

mRNA sequence

ATGACTAGTTCTAAACTTCCCCTTTATCCAAATTTGAATTTTTTCAAATCCCATTACCACCAAAATCCATTCCTCCATCCTCCCACCTCTCTTAACAGCCTTCTCAATTCTGGCCGAACTTCAAAACATGCCACTCAAATTCATTCCCAACTCATCACCACCGCCTTCCTTTCCCTCCCTTTCCTCTTCAACAACCTCCTCAACTTGTACGCCAAATGTGGCTCTATTGACCAAACCTTGTTGCTCTTCTCCTCAGCCCCGGATGACTCTAAGAACGTTGTCTCTTGGACTTCTCTTATTACCCAATTTGCCCGTTCTAAAAGACCCTTTCAGGCCTTGATTTTCTTTAACCATATGAGGCGTTCTGGGGTTTATCCCAATCATTACACCTTCTCTGCAGTTTTATCTGCTAGCACTGACACTATGGCTTCTGTTCATGGTGATCAGATGCATTCTTTGGTTTGGAAACATGGGTTCCATGCTGAGGTATTTGTTGCCAGTGCATTAGTTGACATGTATGCCAAGTGTTGTGATATGTGCATGGCCGAGAAGGTGTTTGAGGAAATGCCCGTGAGAAACCTTGTGTCGTGGAACTCTATGATTGTGGGGTTCTTGCAGAACAAGCTTTATGATCGGGCCATTCTCTTCTTTAAGTCGCTTCTACTGGAGAGTCTAACTGCTCTTGATGAGGTAAGCTTTTCCAGTGCCTTGAGTGCCTGTGCCAATGTTGGTAACTTGGAGTTTGGGAAACAAGTTCATGGAGTTGCTCTTAAGCTTGGTGTCAGGAATTTGGTTTATATAAATAACTCACTGATTGACATGTATAGTAAATGTGGTTTATTTGACGACGTTGTGAAGTTGTTTTCAAACATTGGAGTTAGAGATGTTGTTACTTGGAACATAATGATCATGGCATGTGTTTATAATGACAATTATGAAGATGCCTGCAATAGTTTTTGGATGATGAGGAGGGAAGGTTTAATACCTGATGAAGCATCATACTCCTCTGTTCTTCATTCATGTGCAAATCTTGCAGCATTATATCAGGGGACACTGATCCACAATCAGATCATACGATCTGGGTTTGTGAAGAATTTATGTGTCGCAAGTTCTTTGATTACGATGTATGCAAAATGCGGCAGCTTGGTAGATGCTTTTCAGATATTTGAAGAGACTGAGGACCGTAATGTGGTTTGTTGGACAGCCATAATTACAGCTTGTCAACAACACGGCCATGCTAACCGGGTTGTTGAGTTATTCGAGCAAATGTTGAGAGAGGGGATTAAACCCGACTATATTACTTTTGTTTCTGTTCTCTCTGCTTGCAGCCACACTGGTCGGGTGCAAGAAGGATTCTTCTACTTTAATTCAATGATTAAAGTGCATGGTATCTACCCTGGATATGAACATTATGCGTGTATAGTTGACTTGCTTGGTCGTGCTGGGCAGTTGGATAGAGCTAAGATGTTTATAGGACTGATGCCTATCAAACCAGATGCCTCAGTATGGGGTGCTCTGCTCAGTGCTTGCAGGAATCATAGCAACCTTGAAATGGGTAAGGAAGTCGCTCTGGAACTTTTTGATTTGGAACCAGATAATCCTGGAAATTATGTGCTGCTTTGTAACATCTTGACGCGTAATGGGATGTTAAATGAGGCTGATGAGGTTAGAAAAAAGATGGAAACCATTGGGGTGAGGAAAGAACCAGGATGCAGCTGGATTGACATAAAGAATTCAACATTTGTATTTACAGTGCATGATAAGTCACATGAGAAAACGCAGGAGATCTATGAAATGTTGGAAAAGCTACGGGAGTTAGTAAAGAAGAAGGGGTATGTGGCTGAAACTGAATTTGCAATAAACATTGCAGAAGCATACAAGGAGCAAAGTTTGTGGTACCATAGTGAGAAACTAGCTCTTGCATTTGGGCTGCTGACCCTTCCTGCTGGGACTCCAATTAGGATAAAAAAGAATCTAAGAACGTGCGGAGATTGTCATACCGTGATGAAGTTTGCTTCAGAAATTTTTGCACGAGAGATTATAGTAAGAGATATTAGCAGATTCCACCACTTCACCAATGGCATTTGTTCCTGTAAAGATTACTGGTGA

Coding sequence (CDS)

ATGACTAGTTCTAAACTTCCCCTTTATCCAAATTTGAATTTTTTCAAATCCCATTACCACCAAAATCCATTCCTCCATCCTCCCACCTCTCTTAACAGCCTTCTCAATTCTGGCCGAACTTCAAAACATGCCACTCAAATTCATTCCCAACTCATCACCACCGCCTTCCTTTCCCTCCCTTTCCTCTTCAACAACCTCCTCAACTTGTACGCCAAATGTGGCTCTATTGACCAAACCTTGTTGCTCTTCTCCTCAGCCCCGGATGACTCTAAGAACGTTGTCTCTTGGACTTCTCTTATTACCCAATTTGCCCGTTCTAAAAGACCCTTTCAGGCCTTGATTTTCTTTAACCATATGAGGCGTTCTGGGGTTTATCCCAATCATTACACCTTCTCTGCAGTTTTATCTGCTAGCACTGACACTATGGCTTCTGTTCATGGTGATCAGATGCATTCTTTGGTTTGGAAACATGGGTTCCATGCTGAGGTATTTGTTGCCAGTGCATTAGTTGACATGTATGCCAAGTGTTGTGATATGTGCATGGCCGAGAAGGTGTTTGAGGAAATGCCCGTGAGAAACCTTGTGTCGTGGAACTCTATGATTGTGGGGTTCTTGCAGAACAAGCTTTATGATCGGGCCATTCTCTTCTTTAAGTCGCTTCTACTGGAGAGTCTAACTGCTCTTGATGAGGTAAGCTTTTCCAGTGCCTTGAGTGCCTGTGCCAATGTTGGTAACTTGGAGTTTGGGAAACAAGTTCATGGAGTTGCTCTTAAGCTTGGTGTCAGGAATTTGGTTTATATAAATAACTCACTGATTGACATGTATAGTAAATGTGGTTTATTTGACGACGTTGTGAAGTTGTTTTCAAACATTGGAGTTAGAGATGTTGTTACTTGGAACATAATGATCATGGCATGTGTTTATAATGACAATTATGAAGATGCCTGCAATAGTTTTTGGATGATGAGGAGGGAAGGTTTAATACCTGATGAAGCATCATACTCCTCTGTTCTTCATTCATGTGCAAATCTTGCAGCATTATATCAGGGGACACTGATCCACAATCAGATCATACGATCTGGGTTTGTGAAGAATTTATGTGTCGCAAGTTCTTTGATTACGATGTATGCAAAATGCGGCAGCTTGGTAGATGCTTTTCAGATATTTGAAGAGACTGAGGACCGTAATGTGGTTTGTTGGACAGCCATAATTACAGCTTGTCAACAACACGGCCATGCTAACCGGGTTGTTGAGTTATTCGAGCAAATGTTGAGAGAGGGGATTAAACCCGACTATATTACTTTTGTTTCTGTTCTCTCTGCTTGCAGCCACACTGGTCGGGTGCAAGAAGGATTCTTCTACTTTAATTCAATGATTAAAGTGCATGGTATCTACCCTGGATATGAACATTATGCGTGTATAGTTGACTTGCTTGGTCGTGCTGGGCAGTTGGATAGAGCTAAGATGTTTATAGGACTGATGCCTATCAAACCAGATGCCTCAGTATGGGGTGCTCTGCTCAGTGCTTGCAGGAATCATAGCAACCTTGAAATGGGTAAGGAAGTCGCTCTGGAACTTTTTGATTTGGAACCAGATAATCCTGGAAATTATGTGCTGCTTTGTAACATCTTGACGCGTAATGGGATGTTAAATGAGGCTGATGAGGTTAGAAAAAAGATGGAAACCATTGGGGTGAGGAAAGAACCAGGATGCAGCTGGATTGACATAAAGAATTCAACATTTGTATTTACAGTGCATGATAAGTCACATGAGAAAACGCAGGAGATCTATGAAATGTTGGAAAAGCTACGGGAGTTAGTAAAGAAGAAGGGGTATGTGGCTGAAACTGAATTTGCAATAAACATTGCAGAAGCATACAAGGAGCAAAGTTTGTGGTACCATAGTGAGAAACTAGCTCTTGCATTTGGGCTGCTGACCCTTCCTGCTGGGACTCCAATTAGGATAAAAAAGAATCTAAGAACGTGCGGAGATTGTCATACCGTGATGAAGTTTGCTTCAGAAATTTTTGCACGAGAGATTATAGTAAGAGATATTAGCAGATTCCACCACTTCACCAATGGCATTTGTTCCTGTAAAGATTACTGGTGA

Protein sequence

MTSSKLPLYPNLNFFKSHYHQNPFLHPPTSLNSLLNSGRTSKHATQIHSQLITTAFLSLPFLFNNLLNLYAKCGSIDQTLLLFSSAPDDSKNVVSWTSLITQFARSKRPFQALIFFNHMRRSGVYPNHYTFSAVLSASTDTMASVHGDQMHSLVWKHGFHAEVFVASALVDMYAKCCDMCMAEKVFEEMPVRNLVSWNSMIVGFLQNKLYDRAILFFKSLLLESLTALDEVSFSSALSACANVGNLEFGKQVHGVALKLGVRNLVYINNSLIDMYSKCGLFDDVVKLFSNIGVRDVVTWNIMIMACVYNDNYEDACNSFWMMRREGLIPDEASYSSVLHSCANLAALYQGTLIHNQIIRSGFVKNLCVASSLITMYAKCGSLVDAFQIFEETEDRNVVCWTAIITACQQHGHANRVVELFEQMLREGIKPDYITFVSVLSACSHTGRVQEGFFYFNSMIKVHGIYPGYEHYACIVDLLGRAGQLDRAKMFIGLMPIKPDASVWGALLSACRNHSNLEMGKEVALELFDLEPDNPGNYVLLCNILTRNGMLNEADEVRKKMETIGVRKEPGCSWIDIKNSTFVFTVHDKSHEKTQEIYEMLEKLRELVKKKGYVAETEFAINIAEAYKEQSLWYHSEKLALAFGLLTLPAGTPIRIKKNLRTCGDCHTVMKFASEIFAREIIVRDISRFHHFTNGICSCKDYW
BLAST of Lsi06G000210 vs. Swiss-Prot
Match: PP168_ARATH (Pentatricopeptide repeat-containing protein At2g22070 OS=Arabidopsis thaliana GN=PCMP-H41 PE=3 SV=1)

HSP 1 Score: 500.0 bits (1286), Expect = 4.3e-140
Identity = 287/739 (38.84%), Postives = 415/739 (56.16%), Query Frame = 1

Query: 31  LNSLLNSGRTSKHATQIHSQ-LITTAFLSLPFLFNNLLNLYAKCGSIDQTLLLFSSAPDD 90
           +N+L+N    SK    +H++ L     L   F +N +L+ Y+K G +D T   F   P  
Sbjct: 52  MNNLMNV--YSKTGYALHARKLFDEMPLRTAFSWNTVLSAYSKRGDMDSTCEFFDQLPQ- 111

Query: 91  SKNVVSWTSLITQFARSKRPFQALIFFNHMRRSGVYPNHYTFSAVLSASTDTMASVHGDQ 150
            ++ VSWT++I  +    +  +A+     M + G+ P  +T + VL++   T     G +
Sbjct: 112 -RDSVSWTTMIVGYKNIGQYHKAIRVMGDMVKEGIEPTQFTLTNVLASVAATRCMETGKK 171

Query: 151 MHSLVWKHGFHAEVFVASALVDMYAKCCDMCMAEKVFEEMPV------------------ 210
           +HS + K G    V V+++L++MYAKC D  MA+ VF+ M V                  
Sbjct: 172 VHSFIVKLGLRGNVSVSNSLLNMYAKCGDPMMAKFVFDRMVVRDISSWNAMIALHMQVGQ 231

Query: 211 -------------RNLVSWNSMIVGFLQNKLYDRAILFFKSLLLESLTALDEVSFSSALS 270
                        R++V+WNSMI GF Q     RA+  F  +L +SL + D  + +S LS
Sbjct: 232 MDLAMAQFEQMAERDIVTWNSMISGFNQRGYDLRALDIFSKMLRDSLLSPDRFTLASVLS 291

Query: 271 ACANVGNLEFGKQVHGVALKLGVRNLVYINNSLIDMYSKCG------------------- 330
           ACAN+  L  GKQ+H   +  G      + N+LI MYS+CG                   
Sbjct: 292 ACANLEKLCIGKQIHSHIVTTGFDISGIVLNALISMYSRCGGVETARRLIEQRGTKDLKI 351

Query: 331 -----LFDDVVKL---------FSNIGVRDVVTWNIMIMACVYNDNYEDACNSFWMMRRE 390
                L D  +KL         F ++  RDVV W  MI+    + +Y +A N F  M   
Sbjct: 352 EGFTALLDGYIKLGDMNQAKNIFVSLKDRDVVAWTAMIVGYEQHGSYGEAINLFRSMVGG 411

Query: 391 GLIPDEASYSSVLHSCANLAALYQGTLIHNQIIRSGFVKNLCVASSLITMYAKCGSLVDA 450
           G  P+  + +++L   ++LA+L  G  IH   ++SG + ++ V+++LITMYAK G++  A
Sbjct: 412 GQRPNSYTLAAMLSVASSLASLSHGKQIHGSAVKSGEIYSVSVSNALITMYAKAGNITSA 471

Query: 451 FQIFEETE-DRNVVCWTAIITACQQHGHANRVVELFEQMLREGIKPDYITFVSVLSACSH 510
            + F+    +R+ V WT++I A  QHGHA   +ELFE ML EG++PD+IT+V V SAC+H
Sbjct: 472 SRAFDLIRCERDTVSWTSMIIALAQHGHAEEALELFETMLMEGLRPDHITYVGVFSACTH 531

Query: 511 TGRVQEGFFYFNSMIKVHGIYPGYEHYACIVDLLGRAGQLDRAKMFIGLMPIKPDASVWG 570
            G V +G  YF+ M  V  I P   HYAC+VDL GRAG L  A+ FI  MPI+PD   WG
Sbjct: 532 AGLVNQGRQYFDMMKDVDKIIPTLSHYACMVDLFGRAGLLQEAQEFIEKMPIEPDVVTWG 591

Query: 571 ALLSACRNHSNLEMGKEVALELFDLEPDNPGNYVLLCNILTRNGMLNEADEVRKKMETIG 630
           +LLSACR H N+++GK  A  L  LEP+N G Y  L N+ +  G   EA ++RK M+   
Sbjct: 592 SLLSACRVHKNIDLGKVAAERLLLLEPENSGAYSALANLYSACGKWEEAAKIRKSMKDGR 651

Query: 631 VRKEPGCSWIDIKNSTFVFTVHDKSHEKTQEIYEMLEKLRELVKKKGYVAETEFAI-NIA 690
           V+KE G SWI++K+   VF V D +H +  EIY  ++K+ + +KK GYV +T   + ++ 
Sbjct: 652 VKKEQGFSWIEVKHKVHVFGVEDGTHPEKNEIYMTMKKIWDEIKKMGYVPDTASVLHDLE 711

Query: 691 EAYKEQSLWYHSEKLALAFGLLTLPAGTPIRIKKNLRTCGDCHTVMKFASEIFAREIIVR 703
           E  KEQ L +HSEKLA+AFGL++ P  T +RI KNLR C DCHT +KF S++  REIIVR
Sbjct: 712 EEVKEQILRHHSEKLAIAFGLISTPDKTTLRIMKNLRVCNDCHTAIKFISKLVGREIIVR 771

BLAST of Lsi06G000210 vs. Swiss-Prot
Match: PPR32_ARATH (Pentatricopeptide repeat-containing protein At1g11290, chloroplastic OS=Arabidopsis thaliana GN=PCMP-H40 PE=2 SV=1)

HSP 1 Score: 492.7 bits (1267), Expect = 6.9e-138
Identity = 262/657 (39.88%), Postives = 387/657 (58.90%), Query Frame = 1

Query: 46  QIHSQLITTAFLSLPFLFNNLLNLYAKCGSIDQTLLLFSSAPDDSKNVVSWTSLITQFAR 105
           +IH  L+ + F    F    L N+YAKC  +++   +F   P+  +++VSW +++  +++
Sbjct: 156 EIHGLLVKSGFSLDLFAMTGLENMYAKCRQVNEARKVFDRMPE--RDLVSWNTIVAGYSQ 215

Query: 106 SKRPFQALIFFNHMRRSGVYPNHYTFSAVLSASTDTMASVHGDQMHSLVWKHGFHAEVFV 165
           +     AL     M    + P+  T  +VL A +       G ++H    + GF + V +
Sbjct: 216 NGMARMALEMVKSMCEENLKPSFITIVSVLPAVSALRLISVGKEIHGYAMRSGFDSLVNI 275

Query: 166 ASALVDMYAKCCDMCMAEKVFEEMPVRNLVSWNSMIVGFLQNKLYDRAILFFKSLLLESL 225
           ++ALVDMYAKC  +  A ++F+ M  RN+VSWNSMI  ++QN+    A+L F+ +L E +
Sbjct: 276 STALVDMYAKCGSLETARQLFDGMLERNVVSWNSMIDAYVQNENPKEAMLIFQKMLDEGV 335

Query: 226 TALDEVSFSSALSACANVGNLEFGKQVHGVALKLGVRNLVYINNSLIDMYSKCGLFDDVV 285
              D VS   AL ACA++G+LE G+ +H ++++LG+   V + NSLI MY KC   D   
Sbjct: 336 KPTD-VSVMGALHACADLGDLERGRFIHKLSVELGLDRNVSVVNSLISMYCKCKEVDTAA 395

Query: 286 KLFSNIGVRDVVTWNIMIMACVYNDNYEDACNSFWMMRREGLIPDEASYSSVLHSCANLA 345
            +F  +  R +V+WN MI+    N    DA N F  MR   + PD  +Y SV+ + A L+
Sbjct: 396 SMFGKLQSRTLVSWNAMILGFAQNGRPIDALNYFSQMRSRTVKPDTFTYVSVITAIAELS 455

Query: 346 ALYQGTLIHNQIIRSGFVKNLCVASSLITMYAKCGSLVDAFQIFEETEDRNVVCWTAIIT 405
             +    IH  ++RS   KN+ V ++L+ MYAKCG+++ A  IF+   +R+V  W A+I 
Sbjct: 456 ITHHAKWIHGVVMRSCLDKNVFVTTALVDMYAKCGAIMIARLIFDMMSERHVTTWNAMID 515

Query: 406 ACQQHGHANRVVELFEQMLREGIKPDYITFVSVLSACSHTGRVQEGFFYFNSMIKVHGIY 465
               HG     +ELFE+M +  IKP+ +TF+SV+SACSH+G V+ G   F  M + + I 
Sbjct: 516 GYGTHGFGKAALELFEEMQKGTIKPNGVTFLSVISACSHSGLVEAGLKCFYMMKENYSIE 575

Query: 466 PGYEHYACIVDLLGRAGQLDRAKMFIGLMPIKPDASVWGALLSACRNHSNLEMGKEVALE 525
              +HY  +VDLLGRAG+L+ A  FI  MP+KP  +V+GA+L AC+ H N+   ++ A  
Sbjct: 576 LSMDHYGAMVDLLGRAGRLNEAWDFIMQMPVKPAVNVYGAMLGACQIHKNVNFAEKAAER 635

Query: 526 LFDLEPDNPGNYVLLCNILTRNGMLNEADEVRKKMETIGVRKEPGCSWIDIKNSTFVFTV 585
           LF+L PD+ G +VLL NI     M  +  +VR  M   G+RK PGCS ++IKN    F  
Sbjct: 636 LFELNPDDGGYHVLLANIYRAASMWEKVGQVRVSMLRQGLRKTPGCSMVEIKNEVHSFFS 695

Query: 586 HDKSHEKTQEIYEMLEKLRELVKKKGYVAETEFAINIAEAYKEQSLWYHSEKLALAFGLL 645
              +H  +++IY  LEKL   +K+ GYV +T   + +    KEQ L  HSEKLA++FGLL
Sbjct: 696 GSTAHPDSKKIYAFLEKLICHIKEAGYVPDTNLVLGVENDVKEQLLSTHSEKLAISFGLL 755

Query: 646 TLPAGTPIRIKKNLRTCGDCHTVMKFASEIFAREIIVRDISRFHHFTNGICSCKDYW 703
              AGT I ++KNLR C DCH   K+ S +  REI+VRD+ RFHHF NG CSC DYW
Sbjct: 756 NTTAGTTIHVRKNLRVCADCHNATKYISLVTGREIVVRDMQRFHHFKNGACSCGDYW 809

BLAST of Lsi06G000210 vs. Swiss-Prot
Match: PP307_ARATH (Pentatricopeptide repeat-containing protein At4g13650 OS=Arabidopsis thaliana GN=PCMP-H42 PE=2 SV=2)

HSP 1 Score: 483.4 bits (1243), Expect = 4.2e-135
Identity = 255/658 (38.75%), Postives = 375/658 (56.99%), Query Frame = 1

Query: 46   QIHSQLITTAFLSLPFLFNNLLNLYAKCGSIDQTLLLFSSAPDDSKNVVSWTSLITQFAR 105
            Q+H+      F S   +   LLNLYAKC  I+  L  F     + +NVV W  ++  +  
Sbjct: 410  QLHAYTTKLGFASNNKIEGALLNLYAKCADIETALDYFLET--EVENVVLWNVMLVAYGL 469

Query: 106  SKRPFQALIFFNHMRRSGVYPNHYTFSAVLSASTDTMASVHGDQMHSLVWKHGFHAEVFV 165
                  +   F  M+   + PN YT+ ++L           G+Q+HS + K  F    +V
Sbjct: 470  LDDLRNSFRIFRQMQIEEIVPNQYTYPSILKTCIRLGDLELGEQIHSQIIKTNFQLNAYV 529

Query: 166  ASALVDMYAKCCDMCMAEKVFEEMPVRNLVSWNSMIVGFLQNKLYDRAILFFKSLLLESL 225
             S L+DMYAK   +  A  +      +++VSW +MI G+ Q    D+A+  F+ +L   +
Sbjct: 530  CSVLIDMYAKLGKLDTAWDILIRFAGKDVVSWTTMIAGYTQYNFDDKALTTFRQMLDRGI 589

Query: 226  TALDEVSFSSALSACANVGNLEFGKQVHGVALKLGVRNLVYINNSLIDMYSKCGLFDDVV 285
             + DEV  ++A+SACA +  L+ G+Q+H  A   G  + +   N+L+ +YS+CG  ++  
Sbjct: 590  RS-DEVGLTNAVSACAGLQALKEGQQIHAQACVSGFSSDLPFQNALVTLYSRCGKIEESY 649

Query: 286  KLFSNIGVRDVVTWNIMIMACVYNDNYEDACNSFWMMRREGLIPDEASYSSVLHSCANLA 345
              F      D + WN ++     + N E+A   F  M REG+  +  ++ S + + +  A
Sbjct: 650  LAFEQTEAGDNIAWNALVSGFQQSGNNEEALRVFVRMNREGIDNNNFTFGSAVKAASETA 709

Query: 346  ALYQGTLIHNQIIRSGFVKNLCVASSLITMYAKCGSLVDAFQIFEETEDRNVVCWTAIIT 405
             + QG  +H  I ++G+     V ++LI+MYAKCGS+ DA + F E   +N V W AII 
Sbjct: 710  NMKQGKQVHAVITKTGYDSETEVCNALISMYAKCGSISDAEKQFLEVSTKNEVSWNAIIN 769

Query: 406  ACQQHGHANRVVELFEQMLREGIKPDYITFVSVLSACSHTGRVQEGFFYFNSMIKVHGIY 465
            A  +HG  +  ++ F+QM+   ++P+++T V VLSACSH G V +G  YF SM   +G+ 
Sbjct: 770  AYSKHGFGSEALDSFDQMIHSNVRPNHVTLVGVLSACSHIGLVDKGIAYFESMNSEYGLS 829

Query: 466  PGYEHYACIVDLLGRAGQLDRAKMFIGLMPIKPDASVWGALLSACRNHSNLEMGKEVALE 525
            P  EHY C+VD+L RAG L RAK FI  MPIKPDA VW  LLSAC  H N+E+G+  A  
Sbjct: 830  PKPEHYVCVVDMLTRAGLLSRAKEFIQEMPIKPDALVWRTLLSACVVHKNMEIGEFAAHH 889

Query: 526  LFDLEPDNPGNYVLLCNILTRNGMLNEADEVRKKMETIGVRKEPGCSWIDIKNSTFVFTV 585
            L +LEP++   YVLL N+   +   +  D  R+KM+  GV+KEPG SWI++KNS   F V
Sbjct: 890  LLELEPEDSATYVLLSNLYAVSKKWDARDLTRQKMKEKGVKKEPGQSWIEVKNSIHSFYV 949

Query: 586  HDKSHEKTQEIYEMLEKLRELVKKKGYVAETEFAIN-IAEAYKEQSLWYHSEKLALAFGL 645
             D++H    EI+E  + L +   + GYV +    +N +    K+  ++ HSEKLA++FGL
Sbjct: 950  GDQNHPLADEIHEYFQDLTKRASEIGYVQDCFSLLNELQHEQKDPIIFIHSEKLAISFGL 1009

Query: 646  LTLPAGTPIRIKKNLRTCGDCHTVMKFASEIFAREIIVRDISRFHHFTNGICSCKDYW 703
            L+LPA  PI + KNLR C DCH  +KF S++  REIIVRD  RFHHF  G CSCKDYW
Sbjct: 1010 LSLPATVPINVMKNLRVCNDCHAWIKFVSKVSNREIIVRDAYRFHHFEGGACSCKDYW 1064

BLAST of Lsi06G000210 vs. Swiss-Prot
Match: PP312_ARATH (Pentatricopeptide repeat-containing protein At4g14850 OS=Arabidopsis thaliana GN=LOI1 PE=1 SV=1)

HSP 1 Score: 472.2 bits (1214), Expect = 9.6e-132
Identity = 262/647 (40.49%), Postives = 375/647 (57.96%), Query Frame = 1

Query: 60  PFLFNNLLNLYAKCGSIDQTLLLFSSAPDDSKNVVSWTSLITQFARSKRPFQALIFFNHM 119
           PFL N L+N+Y+K    +   L+    P  ++NVVSWTSLI+  A++     AL+ F  M
Sbjct: 42  PFLANYLINMYSKLDHPESARLVLRLTP--ARNVVSWTSLISGLAQNGHFSTALVEFFEM 101

Query: 120 RRSGVYPNHYTFSAVLSASTDTMASVHGDQMHSLVWKHGFHAEVFVASALVDMYAKCCDM 179
           RR GV PN +TF     A       V G Q+H+L  K G   +VFV  +  DMY K    
Sbjct: 102 RREGVVPNDFTFPCAFKAVASLRLPVTGKQIHALAVKCGRILDVFVGCSAFDMYCKTRLR 161

Query: 180 CMAEKVFEEMPVRNLVSWNSMIVGFLQNKLYDRAI-LFFKSLLLESLTALDEVSFSSALS 239
             A K+F+E+P RNL +WN+ I   + +     AI  F +   ++     + ++F + L+
Sbjct: 162 DDARKLFDEIPERNLETWNAFISNSVTDGRPREAIEAFIEFRRIDGHP--NSITFCAFLN 221

Query: 240 ACANVGNLEFGKQVHGVALKLGVRNLVYINNSLIDMYSKCGLFDDVVKLFSNIGVRDVVT 299
           AC++  +L  G Q+HG+ L+ G    V + N LID Y KC        +F+ +G ++ V+
Sbjct: 222 ACSDWLHLNLGMQLHGLVLRSGFDTDVSVCNGLIDFYGKCKQIRSSEIIFTEMGTKNAVS 281

Query: 300 WNIMIMACVYNDNYEDACNSFWMMRREGLIPDEASYSSVLHSCANLAALYQGTLIHNQII 359
           W  ++ A V N   E A   +   R++ +   +   SSVL +CA +A L  G  IH   +
Sbjct: 282 WCSLVAAYVQNHEDEKASVLYLRSRKDIVETSDFMISSVLSACAGMAGLELGRSIHAHAV 341

Query: 360 RSGFVKNLCVASSLITMYAKCGSLVDAFQIFEETEDRNVVCWTAIITACQQHGHANRVVE 419
           ++   + + V S+L+ MY KCG + D+ Q F+E  ++N+V   ++I      G  +  + 
Sbjct: 342 KACVERTIFVGSALVDMYGKCGCIEDSEQAFDEMPEKNLVTRNSLIGGYAHQGQVDMALA 401

Query: 420 LFEQMLREGI--KPDYITFVSVLSACSHTGRVQEGFFYFNSMIKVHGIYPGYEHYACIVD 479
           LFE+M   G    P+Y+TFVS+LSACS  G V+ G   F+SM   +GI PG EHY+CIVD
Sbjct: 402 LFEEMAPRGCGPTPNYMTFVSLLSACSRAGAVENGMKIFDSMRSTYGIEPGAEHYSCIVD 461

Query: 480 LLGRAGQLDRAKMFIGLMPIKPDASVWGALLSACRNHSNLEMGKEVALELFDLEPDNPGN 539
           +LGRAG ++RA  FI  MPI+P  SVWGAL +ACR H   ++G   A  LF L+P + GN
Sbjct: 462 MLGRAGMVERAYEFIKKMPIQPTISVWGALQNACRMHGKPQLGLLAAENLFKLDPKDSGN 521

Query: 540 YVLLCNILTRNGMLNEADEVRKKMETIGVRKEPGCSWIDIKNSTFVFTVHDKSHEKTQEI 599
           +VLL N     G   EA+ VR++++ +G++K  G SWI +KN    F   D+SH   +EI
Sbjct: 522 HVLLSNTFAAAGRWAEANTVREELKGVGIKKGAGYSWITVKNQVHAFQAKDRSHILNKEI 581

Query: 600 YEMLEKLRELVKKKGYVAETEFAI-NIAEAYKEQSLWYHSEKLALAFGLLTLPAGTPIRI 659
              L KLR  ++  GY  + + ++ ++ E  K   + +HSEKLALAFGLL+LP   PIRI
Sbjct: 582 QTTLAKLRNEMEAAGYKPDLKLSLYDLEEEEKAAEVSHHSEKLALAFGLLSLPLSVPIRI 641

Query: 660 KKNLRTCGDCHTVMKFASEIFAREIIVRDISRFHHFTNGICSCKDYW 703
            KNLR CGDCH+  KF S    REIIVRD +RFH F +GICSCKDYW
Sbjct: 642 TKNLRICGDCHSFFKFVSGSVKREIIVRDNNRFHRFKDGICSCKDYW 684

BLAST of Lsi06G000210 vs. Swiss-Prot
Match: PP272_ARATH (Pentatricopeptide repeat-containing protein At3g49170, chloroplastic OS=Arabidopsis thaliana GN=EMB2261 PE=2 SV=1)

HSP 1 Score: 470.3 bits (1209), Expect = 3.6e-131
Identity = 248/622 (39.87%), Postives = 373/622 (59.97%), Query Frame = 1

Query: 92  NVVSWTSLITQFARSKRPFQALIFFNHMRRSGVYPNHYTFSAVLSASTDTMASVHGDQMH 151
           NVV+WT +IT+  +   P +A+ FF  M  SG   + +T S+V SA  +      G Q+H
Sbjct: 233 NVVTWTLMITRCMQMGFPREAIRFFLDMVLSGFESDKFTLSSVFSACAELENLSLGKQLH 292

Query: 152 SLVWKHGFHAEVFVASALVDMYAKCC-----DMCMAEKVFEEMPVRNLVSWNSMIVGFLQ 211
           S   + G   +V    +LVDMYAKC      D C   KVF+ M   +++SW ++I G+++
Sbjct: 293 SWAIRSGLVDDV--ECSLVDMYAKCSADGSVDDC--RKVFDRMEDHSVMSWTALITGYMK 352

Query: 212 N-KLYDRAILFFKSLLLESLTALDEVSFSSALSACANVGNLEFGKQVHGVALKLGVRNLV 271
           N  L   AI  F  ++ +     +  +FSSA  AC N+ +   GKQV G A K G+ +  
Sbjct: 353 NCNLATEAINLFSEMITQGHVEPNHFTFSSAFKACGNLSDPRVGKQVLGQAFKRGLASNS 412

Query: 272 YINNSLIDMYSKCGLFDDVVKLFSNIGVRDVVTWNIMIMACVYNDNYEDACNSFWMMRRE 331
            + NS+I M+ K    +D  + F ++  +++V++N  +     N N+E A      +   
Sbjct: 413 SVANSVISMFVKSDRMEDAQRAFESLSEKNLVSYNTFLDGTCRNLNFEQAFKLLSEITER 472

Query: 332 GLIPDEASYSSVLHSCANLAALYQGTLIHNQIIRSGFVKNLCVASSLITMYAKCGSLVDA 391
            L     +++S+L   AN+ ++ +G  IH+Q+++ G   N  V ++LI+MY+KCGS+  A
Sbjct: 473 ELGVSAFTFASLLSGVANVGSIRKGEQIHSQVVKLGLSCNQPVCNALISMYSKCGSIDTA 532

Query: 392 FQIFEETEDRNVVCWTAIITACQQHGHANRVVELFEQMLREGIKPDYITFVSVLSACSHT 451
            ++F   E+RNV+ WT++IT   +HG A RV+E F QM+ EG+KP+ +T+V++LSACSH 
Sbjct: 533 SRVFNFMENRNVISWTSMITGFAKHGFAIRVLETFNQMIEEGVKPNEVTYVAILSACSHV 592

Query: 452 GRVQEGFFYFNSMIKVHGIYPGYEHYACIVDLLGRAGQLDRAKMFIGLMPIKPDASVWGA 511
           G V EG+ +FNSM + H I P  EHYAC+VDLL RAG L  A  FI  MP + D  VW  
Sbjct: 593 GLVSEGWRHFNSMYEDHKIKPKMEHYACMVDLLCRAGLLTDAFEFINTMPFQADVLVWRT 652

Query: 512 LLSACRNHSNLEMGKEVALELFDLEPDNPGNYVLLCNILTRNGMLNEADEVRKKMETIGV 571
            L ACR HSN E+GK  A ++ +L+P+ P  Y+ L NI    G   E+ E+R+KM+   +
Sbjct: 653 FLGACRVHSNTELGKLAARKILELDPNEPAAYIQLSNIYACAGKWEESTEMRRKMKERNL 712

Query: 572 RKEPGCSWIDIKNSTFVFTVHDKSHEKTQEIYEMLEKLRELVKKKGYVAETEFAINIA-- 631
            KE GCSWI++ +    F V D +H    +IY+ L++L   +K+ GYV +T+  ++    
Sbjct: 713 VKEGGCSWIEVGDKIHKFYVGDTAHPNAHQIYDELDRLITEIKRCGYVPDTDLVLHKLEE 772

Query: 632 ---EAYKEQSLWYHSEKLALAFGLLTLPAGTPIRIKKNLRTCGDCHTVMKFASEIFAREI 691
              EA KE+ L+ HSEK+A+AFGL++     P+R+ KNLR CGDCH  MK+ S +  REI
Sbjct: 773 ENDEAEKERLLYQHSEKIAVAFGLISTSKSRPVRVFKNLRVCGDCHNAMKYISTVSGREI 832

Query: 692 IVRDISRFHHFTNGICSCKDYW 703
           ++RD++RFHHF +G CSC DYW
Sbjct: 833 VLRDLNRFHHFKDGKCSCNDYW 850

BLAST of Lsi06G000210 vs. TrEMBL
Match: A0A0A0LVV0_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_1G560780 PE=4 SV=1)

HSP 1 Score: 999.2 bits (2582), Expect = 2.5e-288
Identity = 523/700 (74.71%), Postives = 566/700 (80.86%), Query Frame = 1

Query: 4   SKLPLYPNLNFFKSHYHQNPFLHPPTSLNSLLNSGRTSKHATQIHSQLITTAFLSLPFLF 63
           SKLPL+PNL+FFKSHYHQ PFLHP TSLNSLLN  RTSKHATQIHSQLI           
Sbjct: 6   SKLPLHPNLSFFKSHYHQTPFLHPLTSLNSLLNCSRTSKHATQIHSQLI----------- 65

Query: 64  NNLLNLYAKCGSIDQTLLLFSSAPDDSKNVVSWTSLITQFARSKRPFQALIFFNHMRRSG 123
                          T LL  S P        + +L+  +A+     Q L+ F+      
Sbjct: 66  --------------TTALL--SLP------FLFNNLLNLYAKCGSVDQTLLLFSSAPDDS 125

Query: 124 VYPNHYTFSAVLSASTDTMASVHGDQMHSLVWKHGFHAEVFVASALVDMYAKCCDMCMAE 183
              N  +++++++  T            + + + G +   +  SA++      C    A 
Sbjct: 126 --KNVVSWTSLITQLTRFKRPFKALTFFNHMRRSGVYPNHYTFSAVLS----ACTDTTAS 185

Query: 184 KVFEEMPVRNLVSWNSMIVGFL-QNKLYDRAILFFKSLLLESLTALDEVSFSSALSACAN 243
              E+M   +LV W     GFL +NKLYD+AI FFK+LLLE+LTALDEVSFSS  SACAN
Sbjct: 186 VHGEQM--HSLV-WKH---GFLAENKLYDQAIFFFKTLLLENLTALDEVSFSSVFSACAN 245

Query: 244 VGNLEFGKQVHGVALKLGVRNLVYINNSLIDMYSKCGLFDDVVKLFSNIGVRDVVTWNIM 303
            GNLEFGKQVHGVALKLGV NLVYINNSL DMY KCGLF+DV KLFSN G RDVVTWNIM
Sbjct: 246 AGNLEFGKQVHGVALKLGVWNLVYINNSLSDMYGKCGLFNDVAKLFSNTGARDVVTWNIM 305

Query: 304 IMACVYNDNYEDACNSFWMMRREGLIPDEASYSSVLHSCANLAALYQGTLIHNQIIRSGF 363
           IMA VYN NYEDACNSFWMMRR+G IPDEASYSSVLHSCANLAALYQGTLIHNQIIRSGF
Sbjct: 306 IMAYVYNHNYEDACNSFWMMRRKGSIPDEASYSSVLHSCANLAALYQGTLIHNQIIRSGF 365

Query: 364 VKNLCVASSLITMYAKCGSLVDAFQIFEETEDRNVVCWTAIITACQQHGHANRVVELFEQ 423
           VKNL VASSLITMYAKCGSLVDAFQIFEETEDRNVVCWTAII ACQQHGHAN VVELFEQ
Sbjct: 366 VKNLRVASSLITMYAKCGSLVDAFQIFEETEDRNVVCWTAIIAACQQHGHANWVVELFEQ 425

Query: 424 MLREGIKPDYITFVSVLSACSHTGRVQEGFFYFNSMIKVHGIYPGYEHYACIVDLLGRAG 483
           MLREGIKPDYITFVSVLSACSHTGRV+EGFFYFNSMIKVHGIYPG+EHYACIVDLL RAG
Sbjct: 426 MLREGIKPDYITFVSVLSACSHTGRVEEGFFYFNSMIKVHGIYPGHEHYACIVDLLSRAG 485

Query: 484 QLDRAKMFIGLMPIKPDASVWGALLSACRNHSNLEMGKEVALELFDLEPDNPGNYVLLCN 543
           +LDRAK FI LMPIKPDASVWGALLSACRNHSNL MGKEVAL+LFDLEPDNPGNYVLLCN
Sbjct: 486 ELDRAKRFIELMPIKPDASVWGALLSACRNHSNLIMGKEVALKLFDLEPDNPGNYVLLCN 545

Query: 544 ILTRNGMLNEADEVRKKMETIGVRKEPGCSWIDIKNSTFVFTVHDKSHEKTQEIYEMLEK 603
           ILTRNGMLNEADEVR+KME+IGVRKEPGCSWIDIKNST+VFTVHDKSHEKT+EIYEMLEK
Sbjct: 546 ILTRNGMLNEADEVRRKMESIGVRKEPGCSWIDIKNSTYVFTVHDKSHEKTKEIYEMLEK 605

Query: 604 LRELVKKKGYVAETEFAINIAEAYKEQSLWYHSEKLALAFGLLTLPAGTPIRIKKNLRTC 663
           L+ELVKKKGYVAETEFAIN AE YKEQSLWYHSEK+ALAFGLL+LPAG PIRIKKNLRTC
Sbjct: 606 LKELVKKKGYVAETEFAINTAEEYKEQSLWYHSEKIALAFGLLSLPAGAPIRIKKNLRTC 660

Query: 664 GDCHTVMKFASEIFAREIIVRDISRFHHFTNGICSCKDYW 703
           GDCHTVMKFASEIFAREIIVRDI+RFHHFTNGICSC DYW
Sbjct: 666 GDCHTVMKFASEIFAREIIVRDINRFHHFTNGICSCGDYW 660

BLAST of Lsi06G000210 vs. TrEMBL
Match: A0A061F539_THECC (Tetratricopeptide repeat superfamily protein OS=Theobroma cacao GN=TCM_026848 PE=4 SV=1)

HSP 1 Score: 944.1 bits (2439), Expect = 9.6e-272
Identity = 452/680 (66.47%), Postives = 542/680 (79.71%), Query Frame = 1

Query: 26  HPPTSLNSLLNSGRTSK---HATQIHSQLITTAFLSLPFLFNNLLNLYAKCGSIDQTLLL 85
           H  T LN+LLN+   +K   HA QIHSQ +T +FLS+PFLFNNLL+LYAK G I  +LLL
Sbjct: 29  HTVTHLNNLLNTTARTKSLRHAAQIHSQFVTNSFLSVPFLFNNLLSLYAKSGHISHSLLL 88

Query: 86  FSSAPDDSKNVVSWTSLITQFARSKRPFQALIFFNHMRRSGVYPNHYTFSAVLSASTDTM 145
           FS+A    K VVSWT+LI+  +R   PF+AL  FNHMR +GVYPNHYTFSAVL A   T 
Sbjct: 89  FSTAHRVPKGVVSWTTLISHLSRFNTPFEALTLFNHMRSNGVYPNHYTFSAVLPACASTT 148

Query: 146 ASVHGDQMHSLVWKHGFHAEVFVASALVDMYAKCCDMCMAEKVFEEMPVRNLVSWNSMIV 205
             +HG QMH L+ KHG+  +VFV SAL DMY KC +M +AEKVF  +P RNLVSWNSMIV
Sbjct: 149 ILLHGQQMHCLISKHGYDTDVFVGSALADMYTKCHNMGLAEKVFVALPERNLVSWNSMIV 208

Query: 206 GFLQNKLYDRAILFFKSLLLESLTALDEVSFSSALSACANVGNLEFGKQVHGVALKLGVR 265
           G L N L+D+A+L F+ ++ E   + D+VSFSS LSA AN+G LEFGKQ+HG+ +K G+ 
Sbjct: 209 GCLLNSLHDKALLLFREVIREDFVSPDQVSFSSVLSASANMGALEFGKQIHGMIVKHGLL 268

Query: 266 NLVYINNSLIDMYSKCGLFDDVVKLFSNIGVRDVVTWNIMIMACVYNDNYEDACNSFWMM 325
            L Y+ NSL+DMY KC LFD+   LF+ +G RDV+TWN+M M CVYN+N+E+ACN FW+M
Sbjct: 269 ALSYVKNSLMDMYFKCSLFDEGALLFNTVGARDVITWNVMSMGCVYNENFEEACNYFWVM 328

Query: 326 RREGLIPDEASYSSVLHSCANLAALYQGTLIHNQIIRSGFVKNLCVASSLITMYAKCGSL 385
           RR G+ PDEAS S+ LH+ A+LAAL QGTLIHNQII++GF KN C+ASSLITMYAKCGSL
Sbjct: 329 RRAGISPDEASCSTALHASAHLAALGQGTLIHNQIIKTGFSKNTCIASSLITMYAKCGSL 388

Query: 386 VDAFQIFEETEDRNVVCWTAIITACQQHGHANRVVELFEQMLREGIKPDYITFVSVLSAC 445
            DA ++FEE ++RNVVCWTA+I ACQQHG+ N+V++LFE+ML +G+KPDYITFV VLSAC
Sbjct: 389 DDARRVFEEIKNRNVVCWTAMIAACQQHGNGNQVIDLFEKMLADGLKPDYITFVCVLSAC 448

Query: 446 SHTGRVQEGFFYFNSMIKVHGIYPGYEHYACIVDLLGRAGQLDRAKMFIGLMPIKPDASV 505
           SHTGRV+EG+ YFNSM KVHGI PG+EHYAC+VDLLGRAGQLD AK FI  M IKPD+SV
Sbjct: 449 SHTGRVEEGYAYFNSMEKVHGISPGHEHYACMVDLLGRAGQLDEAKKFIAQMRIKPDSSV 508

Query: 506 WGALLSACRNHSNLEMGKEVALELFDLEPDNPGNYVLLCNILTRNGMLNEADEVRKKMET 565
           WGALL  C N+ NLE+G EVA  LF+LEP+NPGNYVLL N+    G L EAD+VR+ M  
Sbjct: 509 WGALLGGCANYGNLELGIEVAGRLFELEPNNPGNYVLLSNMYAHKGKLREADQVRRLMGI 568

Query: 566 IGVRKEPGCSWIDIKNSTFVFTVHDKSHEKTQEIYEMLEKLRELVKKKGYVAETEFAINI 625
             VRKEPGCSWID+KN TFVFTVHDKSH +  EIYEML+K+ ELVK KGYV + ++A+N 
Sbjct: 569 NRVRKEPGCSWIDVKNKTFVFTVHDKSHSRMDEIYEMLKKVEELVKDKGYVPQKQYAVNS 628

Query: 626 AEAYKEQSLWYHSEKLALAFGLLTLPAGTPIRIKKNLRTCGDCHTVMKFASEIFAREIIV 685
           A+  KEQSLWYHSEK+A AFGLL LPAG PIRIKKNLRTCGDCH VMKFASE+F REII+
Sbjct: 629 ADEDKEQSLWYHSEKIAFAFGLLALPAGAPIRIKKNLRTCGDCHMVMKFASEVFKREIIL 688

Query: 686 RDISRFHHFTNGICSCKDYW 703
           RDI+RFHHF NG+CSC DYW
Sbjct: 689 RDINRFHHFRNGLCSCSDYW 708

BLAST of Lsi06G000210 vs. TrEMBL
Match: A5AZT2_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VITISV_023383 PE=4 SV=1)

HSP 1 Score: 916.4 bits (2367), Expect = 2.1e-263
Identity = 449/695 (64.60%), Postives = 535/695 (76.98%), Query Frame = 1

Query: 12  LNFFKSHYHQNPFLHPPTSLNSLLNSG---RTSKHATQIHSQLITTAFLSLPFLFNNLLN 71
           L FF       P    PT LN LLN+    R+ KHATQIH+Q+I   + SLPFLFNNL+N
Sbjct: 126 LKFFHKGLSPTPPSPSPTHLNHLLNTAIQTRSLKHATQIHTQIIINNYTSLPFLFNNLIN 185

Query: 72  LYAKCGSIDQTLLLFSSAPDDSKNVVSWTSLITQFARSKRPFQALIFFNHMRRSGVYPNH 131
           LYAKCG ++Q LLLFS      K +V+WTSLIT  +      QAL  FN MR SG YPN 
Sbjct: 186 LYAKCGCLNQALLLFSITHHHFKTIVTWTSLITHLSHFNMHLQALSLFNQMRCSGPYPNQ 245

Query: 132 YTFSAVLSASTDTMASVHGDQMHSLVWKHGFHAEVFVASALVDMYAKCCDMCMAEKVFEE 191
           +TFS++LSAS  TM  +HG Q+HSL+ KHGF A +FV +ALVDMYAKC DM  A +VF++
Sbjct: 246 FTFSSILSASAATMMVLHGQQLHSLIHKHGFDANIFVGTALVDMYAKCADMHSAVRVFDQ 305

Query: 192 MPVRNLVSWNSMIVGFLQNKLYDRAILFFKSLLLESLTALDEVSFSSALSACANVGNLEF 251
           MP RNLVSWNSMIVGF  N LYDRA+  FK +L E     +EVS SS LSACAN+G L F
Sbjct: 306 MPERNLVSWNSMIVGFFHNNLYDRAVGVFKDVLREKTVIPNEVSVSSVLSACANMGGLNF 365

Query: 252 GKQVHGVALKLGVRNLVYINNSLIDMYSKCGLFDDVVKLFSNIGVRDVVTWNIMIMACVY 311
           G+QVHGV +K G+  L Y+ NSL+DMY KC  FD+ VKLF  +G RDVVTWN+++M  V 
Sbjct: 366 GRQVHGVVVKYGLVPLTYVMNSLMDMYFKCRFFDEGVKLFQCVGDRDVVTWNVLVMGFVQ 425

Query: 312 NDNYEDACNSFWMMRREGLIPDEASYSSVLHSCANLAALYQGTLIHNQIIRSGFVKNLCV 371
           ND +E+ACN FW+MRREG++PDEAS+S+VLHS A+LAAL+QGT IH+QII+ G+VKN+C+
Sbjct: 426 NDKFEEACNYFWVMRREGILPDEASFSTVLHSSASLAALHQGTAIHDQIIKLGYVKNMCI 485

Query: 372 ASSLITMYAKCGSLVDAFQIFEETEDRNVVCWTAIITACQQHGHANRVVELFEQMLREGI 431
             SLITMYAKCGSLVDA+Q+FE  ED NV+ WTA+I+A Q HG AN+V+ELFE ML EGI
Sbjct: 486 LGSLITMYAKCGSLVDAYQVFEGIEDHNVISWTAMISAYQLHGCANQVIELFEHMLSEGI 545

Query: 432 KPDYITFVSVLSACSHTGRVQEGFFYFNSMIKVHGIYPGYEHYACIVDLLGRAGQLDRAK 491
           +P ++TFV VLSACSHTGRV+EG  +FNSM K+H + PG EHYAC+VDLLGRAG LD AK
Sbjct: 546 EPSHVTFVCVLSACSHTGRVEEGLAHFNSMKKIHDMNPGPEHYACMVDLLGRAGWLDEAK 605

Query: 492 MFIGLMPIKPDASVWGALLSACRNHSNLEMGKEVALELFDLEPDNPGNYVLLCNILTRNG 551
            FI  MP+KP  SVWGALL ACR + NL+MG+E A  LF++EP NPGNYVLL N+ TR+G
Sbjct: 606 RFIESMPMKPTPSVWGALLGACRKYGNLKMGREAAERLFEMEPYNPGNYVLLANMCTRSG 665

Query: 552 MLNEADEVRKKMETIGVRKEPGCSWIDIKNSTFVFTVHDKSHEKTQEIYEMLEKLRELVK 611
            L EA+EVR+ M   GVRKEPGCSWID+KN TFVFT HD+SH  + EIY+MLEKL +LVK
Sbjct: 666 RLEEANEVRRLMGVNGVRKEPGCSWIDVKNMTFVFTAHDRSHSSSDEIYKMLEKLEKLVK 725

Query: 612 KKGYVAETEFAIN-IAEAYKEQSLWYHSEKLALAFGLLTLPAGTPIRIKKNLRTCGDCHT 671
           KKGYVAETEF  N + E  +EQ LWYHSEKLALAFGLLTLP  +PIRIKKNLRTCG CHT
Sbjct: 726 KKGYVAETEFVTNHLEENEEEQGLWYHSEKLALAFGLLTLPIDSPIRIKKNLRTCGHCHT 785

Query: 672 VMKFASEIFAREIIVRDISRFHHFTNGICSCKDYW 703
           VMK AS+IF REIIVRDI+RFH F +G CSC DYW
Sbjct: 786 VMKLASKIFDREIIVRDINRFHRFADGFCSCGDYW 820

BLAST of Lsi06G000210 vs. TrEMBL
Match: A0A059D2Q4_EUCGR (Uncharacterized protein OS=Eucalyptus grandis GN=EUGRSUZ_B01821 PE=4 SV=1)

HSP 1 Score: 896.7 bits (2316), Expect = 1.8e-257
Identity = 423/692 (61.13%), Postives = 532/692 (76.88%), Query Frame = 1

Query: 14  FFKSHYHQNPFLHPPTSLNSLLNSG---RTSKHATQIHSQLITTAFLSLPFLFNNLLNLY 73
           F  + +H+ P    PT LN LLN+    R  +H TQIH+Q+ T   +S+P L N LL+LY
Sbjct: 26  FLHAPHHKAPSPPTPTQLNDLLNTASQTRNIRHVTQIHAQITTNGCISIPSLLNRLLSLY 85

Query: 74  AKCGSIDQTLLLFSSAPDDSKNVVSWTSLITQFARSKRPFQALIFFNHMRRSGVYPNHYT 133
           AKCG +DQ++ LFS A D SKNVV+WTSLITQ + + +PF+AL  FN MRR+G+YPNH+T
Sbjct: 86  AKCGHVDQSVALFSQASDGSKNVVTWTSLITQQSHANKPFKALALFNQMRRTGIYPNHFT 145

Query: 134 FSAVLSASTDTMASVHGDQMHSLVWKHGFHAEVFVASALVDMYAKCCDMCMAEKVFEEMP 193
           FSAVL A  +TM   HG+Q+H LV KHGF  ++FV SALVDMYAKC  M  A+K+F+EMP
Sbjct: 146 FSAVLPACAETMVLSHGEQIHCLVIKHGFGCDIFVGSALVDMYAKCSRMDAAQKMFDEMP 205

Query: 194 VRNLVSWNSMIVGFLQNKLYDRAILFFKSLLLESLTALDEVSFSSALSACANVGNLEFGK 253
            RNLV+WNSM+VG LQNK +DRA+L F+ +L     A DEV+FSSALSAC N G  EFG+
Sbjct: 206 ERNLVTWNSMVVGLLQNKFFDRAVLVFREVLKRDAVAPDEVTFSSALSACGNNGGSEFGR 265

Query: 254 QVHGVALKLGVRNLVYINNSLIDMYSKCGLFDDVVKLFSNIGVRDVVTWNIMIMACVYND 313
           QVHG+ +K  +    Y+ NSL+DMY KCG  DD ++ F   GVRDVVTWN+M+M  V+ND
Sbjct: 266 QVHGLVVKRNLMISSYVKNSLLDMYCKCGSLDDALRQFRTSGVRDVVTWNVMMMGFVHND 325

Query: 314 NYEDACNSFWMMRREGLIPDEASYSSVLHSCANLAALYQGTLIHNQIIRSGFVKNLCVAS 373
            +E+AC+    MR E +IPDE S+S+ LH+ A+++AL QGT IHNQI++SGFV + C+ S
Sbjct: 326 KFEEACHYLSFMRSEDVIPDEVSFSTALHATASISALSQGTSIHNQILKSGFVSSTCIGS 385

Query: 374 SLITMYAKCGSLVDAFQIFEETEDRNVVCWTAIITACQQHGHANRVVELFEQMLREGIKP 433
           +LI MYAKCGSL DA + FEE + R VVCW+A+ITA QQHG A++ +++FE ML EG KP
Sbjct: 386 ALIMMYAKCGSLADATRAFEEIKGRTVVCWSAMITAFQQHGCADQAIKMFEDMLAEGTKP 445

Query: 434 DYITFVSVLSACSHTGRVQEGFFYFNSMIKVHGIYPGYEHYACIVDLLGRAGQLDRAKMF 493
           DYIT VS+LSACSH GR+ +G+ YFNSM K++GI PG+EHYAC+VDLLGRAG+LD AK  
Sbjct: 446 DYITLVSLLSACSHAGRIDKGYLYFNSMSKIYGINPGHEHYACMVDLLGRAGRLDEAKKL 505

Query: 494 IGLMPIKPDASVWGALLSACRNHSNLEMGKEVALELFDLEPDNPGNYVLLCNILTRNGML 553
              MPIK D++VWGALL AC NH NLE+G+E A  LF+L+PDNPGNYVLL N+ +R G  
Sbjct: 506 TESMPIKADSTVWGALLGACSNHRNLELGREAADRLFELQPDNPGNYVLLSNMYSREGRS 565

Query: 554 NEADEVRKKMETIGVRKEPGCSWIDIKNSTFVFTVHDKSHEKTQEIYEMLEKLRELVKKK 613
            EADEVR+ M   G++KEPGCSW+DIKN+TFVFT HD+SH  T EIYEML +L ELVKKK
Sbjct: 566 KEADEVRRLMSVNGLKKEPGCSWVDIKNTTFVFTSHDRSHTMTCEIYEMLGQLEELVKKK 625

Query: 614 GYVAETEFAINIAEAYKEQSLWYHSEKLALAFGLLTLPAGTPIRIKKNLRTCGDCHTVMK 673
           GYV + +FA+N    YKE++LW+HSE+LALAF LLTLP G P+RIKKNLRTCGDCHTVMK
Sbjct: 626 GYVPQVQFAVNSIGEYKERNLWHHSERLALAFALLTLPNGAPVRIKKNLRTCGDCHTVMK 685

Query: 674 FASEIFAREIIVRDISRFHHFTNGICSCKDYW 703
           FAS+I+ REI+VRD++RFH FT G C+C DYW
Sbjct: 686 FASDIYKREIVVRDVNRFHRFTEGQCTCGDYW 717

BLAST of Lsi06G000210 vs. TrEMBL
Match: A0A0D2VD66_GOSRA (Uncharacterized protein OS=Gossypium raimondii GN=B456_013G131400 PE=4 SV=1)

HSP 1 Score: 890.2 bits (2299), Expect = 1.6e-255
Identity = 435/687 (63.32%), Postives = 520/687 (75.69%), Query Frame = 1

Query: 19  YHQNPFLHPPTSLNSLLNSGRTSK---HATQIHSQLITTAFLSLPFLFNNLLNLYAKCGS 78
           Y Q+   H PT LN LLN+   +K   HATQIHSQ+IT +F+SLPFLFNNLL LY+KCG 
Sbjct: 5   YSQDSHRHKPTHLNYLLNATAQTKCLRHATQIHSQIITNSFISLPFLFNNLLTLYSKCGR 64

Query: 79  IDQTLLLFSSAPDDSKNVVSWTSLITQFARSKRPFQALIFFNHMRRSGVYPNHYTFSAVL 138
              +LLLFS+A   ++ VVSWTSLI+  +    PFQAL  FN MR +GVYPNH+TFSAVL
Sbjct: 65  PSLSLLLFSTAHQLTRTVVSWTSLISLLSHLPAPFQALSCFNQMRTAGVYPNHFTFSAVL 124

Query: 139 SASTDTMASVHGDQMHSLVWKHGFHAEVFVASALVDMYAKCCDMCMAEKVFEEMPVRNLV 198
            A   T   VHG QMH L+ KHG+   VFV SALV+MYAKC DM +AEKVF  +P RN+V
Sbjct: 125 PACASTSILVHGQQMHCLISKHGYEGYVFVGSALVNMYAKCHDMGLAEKVFVALPERNIV 184

Query: 199 SWNSMIVGFLQNKLYDRAILFFKSLLLESLTALDEVSFSSALSACANVGNLEFGKQVHGV 258
           SWNSMIVG L N  + +A+  F+ +  E L + ++VSFS+ LSA AN+G LEFGKQVHGV
Sbjct: 185 SWNSMIVGCLLNSFHVKALFLFREVRREDLFSPNQVSFSTVLSASANIGALEFGKQVHGV 244

Query: 259 ALKLGVRNLVYINNSLIDMYSKCGLFDDVVKLFSNIGVRDVVTWNIMIMACVYNDNYEDA 318
            +K G+ N                              RDV+ WN+M M CVYN+N+E+A
Sbjct: 245 VVKQGIEN------------------------------RDVIAWNVMSMGCVYNENFEEA 304

Query: 319 CNSFWMMRREGLIPDEASYSSVLHSCANLAALYQGTLIHNQIIRSGFVKNLCVASSLITM 378
           CN  W+M+R G+ PDEASYS+ LH+ A+LAAL QGTLIHNQ I+SGF  N C+ASSLITM
Sbjct: 305 CNYLWVMKRAGISPDEASYSTALHASAHLAALDQGTLIHNQTIKSGFSTNTCIASSLITM 364

Query: 379 YAKCGSLVDAFQIFEETEDRNVVCWTAIITACQQHGHANRVVELFEQMLREGIKPDYITF 438
           YAKCGSL DA ++FEE ++ NVVCWTA+I ACQQHG+ N V++LFE+ML +G+KP YITF
Sbjct: 365 YAKCGSLDDACRVFEEIDNPNVVCWTALIAACQQHGNGNHVIKLFEKMLADGLKPHYITF 424

Query: 439 VSVLSACSHTGRVQEGFFYFNSMIKVHGIYPGYEHYACIVDLLGRAGQLDRAKMFIGLMP 498
           V V+SACSHTGRV+EG  YFNSM KVHGI PG+EHYAC+VDLLGR+GQLD A+ FI  MP
Sbjct: 425 VCVISACSHTGRVEEGHAYFNSMEKVHGIIPGHEHYACMVDLLGRSGQLDEARKFIAQMP 484

Query: 499 IKPDASVWGALLSACRNHSNLEMGKEVALELFDLEPDNPGNYVLLCNILTRNGMLNEADE 558
           IKP+ASVWGALL AC  + NLEMG EVA  LF+LEPDNPGNY+LL N+    G L EAD 
Sbjct: 485 IKPNASVWGALLGACAKYGNLEMGSEVAGRLFELEPDNPGNYILLANMYVHKGKLREADH 544

Query: 559 VRKKMETIGVRKEPGCSWIDIKNSTFVFTVHDKSHEKTQEIYEMLEKLRELVKKKGYVAE 618
           VR+ M    VRKEPGCSWID+KN +FVFTVHDK H +T EIYEML+K++ELV  KGYV +
Sbjct: 545 VRRLMGINRVRKEPGCSWIDVKNKSFVFTVHDKLHARTDEIYEMLKKVKELVTNKGYVPQ 604

Query: 619 TEFAINIAEAYKEQSLWYHSEKLALAFGLLTLPAGTPIRIKKNLRTCGDCHTVMKFASEI 678
           T+FA+N AE  KE+SLWYHSEK+ALAFGLL LPAG PIRIKKNLRTCGDCHTVMKFASEI
Sbjct: 605 TQFAVNSAEELKEESLWYHSEKIALAFGLLALPAGAPIRIKKNLRTCGDCHTVMKFASEI 661

Query: 679 FAREIIVRDISRFHHFTNGICSCKDYW 703
           + REIIVRD++RFHHF NG+CSC+DYW
Sbjct: 665 WKREIIVRDVNRFHHFRNGLCSCRDYW 661

BLAST of Lsi06G000210 vs. TAIR10
Match: AT2G22070.1 (AT2G22070.1 pentatricopeptide (PPR) repeat-containing protein)

HSP 1 Score: 500.0 bits (1286), Expect = 2.4e-141
Identity = 287/739 (38.84%), Postives = 415/739 (56.16%), Query Frame = 1

Query: 31  LNSLLNSGRTSKHATQIHSQ-LITTAFLSLPFLFNNLLNLYAKCGSIDQTLLLFSSAPDD 90
           +N+L+N    SK    +H++ L     L   F +N +L+ Y+K G +D T   F   P  
Sbjct: 52  MNNLMNV--YSKTGYALHARKLFDEMPLRTAFSWNTVLSAYSKRGDMDSTCEFFDQLPQ- 111

Query: 91  SKNVVSWTSLITQFARSKRPFQALIFFNHMRRSGVYPNHYTFSAVLSASTDTMASVHGDQ 150
            ++ VSWT++I  +    +  +A+     M + G+ P  +T + VL++   T     G +
Sbjct: 112 -RDSVSWTTMIVGYKNIGQYHKAIRVMGDMVKEGIEPTQFTLTNVLASVAATRCMETGKK 171

Query: 151 MHSLVWKHGFHAEVFVASALVDMYAKCCDMCMAEKVFEEMPV------------------ 210
           +HS + K G    V V+++L++MYAKC D  MA+ VF+ M V                  
Sbjct: 172 VHSFIVKLGLRGNVSVSNSLLNMYAKCGDPMMAKFVFDRMVVRDISSWNAMIALHMQVGQ 231

Query: 211 -------------RNLVSWNSMIVGFLQNKLYDRAILFFKSLLLESLTALDEVSFSSALS 270
                        R++V+WNSMI GF Q     RA+  F  +L +SL + D  + +S LS
Sbjct: 232 MDLAMAQFEQMAERDIVTWNSMISGFNQRGYDLRALDIFSKMLRDSLLSPDRFTLASVLS 291

Query: 271 ACANVGNLEFGKQVHGVALKLGVRNLVYINNSLIDMYSKCG------------------- 330
           ACAN+  L  GKQ+H   +  G      + N+LI MYS+CG                   
Sbjct: 292 ACANLEKLCIGKQIHSHIVTTGFDISGIVLNALISMYSRCGGVETARRLIEQRGTKDLKI 351

Query: 331 -----LFDDVVKL---------FSNIGVRDVVTWNIMIMACVYNDNYEDACNSFWMMRRE 390
                L D  +KL         F ++  RDVV W  MI+    + +Y +A N F  M   
Sbjct: 352 EGFTALLDGYIKLGDMNQAKNIFVSLKDRDVVAWTAMIVGYEQHGSYGEAINLFRSMVGG 411

Query: 391 GLIPDEASYSSVLHSCANLAALYQGTLIHNQIIRSGFVKNLCVASSLITMYAKCGSLVDA 450
           G  P+  + +++L   ++LA+L  G  IH   ++SG + ++ V+++LITMYAK G++  A
Sbjct: 412 GQRPNSYTLAAMLSVASSLASLSHGKQIHGSAVKSGEIYSVSVSNALITMYAKAGNITSA 471

Query: 451 FQIFEETE-DRNVVCWTAIITACQQHGHANRVVELFEQMLREGIKPDYITFVSVLSACSH 510
            + F+    +R+ V WT++I A  QHGHA   +ELFE ML EG++PD+IT+V V SAC+H
Sbjct: 472 SRAFDLIRCERDTVSWTSMIIALAQHGHAEEALELFETMLMEGLRPDHITYVGVFSACTH 531

Query: 511 TGRVQEGFFYFNSMIKVHGIYPGYEHYACIVDLLGRAGQLDRAKMFIGLMPIKPDASVWG 570
            G V +G  YF+ M  V  I P   HYAC+VDL GRAG L  A+ FI  MPI+PD   WG
Sbjct: 532 AGLVNQGRQYFDMMKDVDKIIPTLSHYACMVDLFGRAGLLQEAQEFIEKMPIEPDVVTWG 591

Query: 571 ALLSACRNHSNLEMGKEVALELFDLEPDNPGNYVLLCNILTRNGMLNEADEVRKKMETIG 630
           +LLSACR H N+++GK  A  L  LEP+N G Y  L N+ +  G   EA ++RK M+   
Sbjct: 592 SLLSACRVHKNIDLGKVAAERLLLLEPENSGAYSALANLYSACGKWEEAAKIRKSMKDGR 651

Query: 631 VRKEPGCSWIDIKNSTFVFTVHDKSHEKTQEIYEMLEKLRELVKKKGYVAETEFAI-NIA 690
           V+KE G SWI++K+   VF V D +H +  EIY  ++K+ + +KK GYV +T   + ++ 
Sbjct: 652 VKKEQGFSWIEVKHKVHVFGVEDGTHPEKNEIYMTMKKIWDEIKKMGYVPDTASVLHDLE 711

Query: 691 EAYKEQSLWYHSEKLALAFGLLTLPAGTPIRIKKNLRTCGDCHTVMKFASEIFAREIIVR 703
           E  KEQ L +HSEKLA+AFGL++ P  T +RI KNLR C DCHT +KF S++  REIIVR
Sbjct: 712 EEVKEQILRHHSEKLAIAFGLISTPDKTTLRIMKNLRVCNDCHTAIKFISKLVGREIIVR 771

BLAST of Lsi06G000210 vs. TAIR10
Match: AT1G11290.1 (AT1G11290.1 Pentatricopeptide repeat (PPR) superfamily protein)

HSP 1 Score: 492.7 bits (1267), Expect = 3.9e-139
Identity = 262/657 (39.88%), Postives = 387/657 (58.90%), Query Frame = 1

Query: 46  QIHSQLITTAFLSLPFLFNNLLNLYAKCGSIDQTLLLFSSAPDDSKNVVSWTSLITQFAR 105
           +IH  L+ + F    F    L N+YAKC  +++   +F   P+  +++VSW +++  +++
Sbjct: 156 EIHGLLVKSGFSLDLFAMTGLENMYAKCRQVNEARKVFDRMPE--RDLVSWNTIVAGYSQ 215

Query: 106 SKRPFQALIFFNHMRRSGVYPNHYTFSAVLSASTDTMASVHGDQMHSLVWKHGFHAEVFV 165
           +     AL     M    + P+  T  +VL A +       G ++H    + GF + V +
Sbjct: 216 NGMARMALEMVKSMCEENLKPSFITIVSVLPAVSALRLISVGKEIHGYAMRSGFDSLVNI 275

Query: 166 ASALVDMYAKCCDMCMAEKVFEEMPVRNLVSWNSMIVGFLQNKLYDRAILFFKSLLLESL 225
           ++ALVDMYAKC  +  A ++F+ M  RN+VSWNSMI  ++QN+    A+L F+ +L E +
Sbjct: 276 STALVDMYAKCGSLETARQLFDGMLERNVVSWNSMIDAYVQNENPKEAMLIFQKMLDEGV 335

Query: 226 TALDEVSFSSALSACANVGNLEFGKQVHGVALKLGVRNLVYINNSLIDMYSKCGLFDDVV 285
              D VS   AL ACA++G+LE G+ +H ++++LG+   V + NSLI MY KC   D   
Sbjct: 336 KPTD-VSVMGALHACADLGDLERGRFIHKLSVELGLDRNVSVVNSLISMYCKCKEVDTAA 395

Query: 286 KLFSNIGVRDVVTWNIMIMACVYNDNYEDACNSFWMMRREGLIPDEASYSSVLHSCANLA 345
            +F  +  R +V+WN MI+    N    DA N F  MR   + PD  +Y SV+ + A L+
Sbjct: 396 SMFGKLQSRTLVSWNAMILGFAQNGRPIDALNYFSQMRSRTVKPDTFTYVSVITAIAELS 455

Query: 346 ALYQGTLIHNQIIRSGFVKNLCVASSLITMYAKCGSLVDAFQIFEETEDRNVVCWTAIIT 405
             +    IH  ++RS   KN+ V ++L+ MYAKCG+++ A  IF+   +R+V  W A+I 
Sbjct: 456 ITHHAKWIHGVVMRSCLDKNVFVTTALVDMYAKCGAIMIARLIFDMMSERHVTTWNAMID 515

Query: 406 ACQQHGHANRVVELFEQMLREGIKPDYITFVSVLSACSHTGRVQEGFFYFNSMIKVHGIY 465
               HG     +ELFE+M +  IKP+ +TF+SV+SACSH+G V+ G   F  M + + I 
Sbjct: 516 GYGTHGFGKAALELFEEMQKGTIKPNGVTFLSVISACSHSGLVEAGLKCFYMMKENYSIE 575

Query: 466 PGYEHYACIVDLLGRAGQLDRAKMFIGLMPIKPDASVWGALLSACRNHSNLEMGKEVALE 525
              +HY  +VDLLGRAG+L+ A  FI  MP+KP  +V+GA+L AC+ H N+   ++ A  
Sbjct: 576 LSMDHYGAMVDLLGRAGRLNEAWDFIMQMPVKPAVNVYGAMLGACQIHKNVNFAEKAAER 635

Query: 526 LFDLEPDNPGNYVLLCNILTRNGMLNEADEVRKKMETIGVRKEPGCSWIDIKNSTFVFTV 585
           LF+L PD+ G +VLL NI     M  +  +VR  M   G+RK PGCS ++IKN    F  
Sbjct: 636 LFELNPDDGGYHVLLANIYRAASMWEKVGQVRVSMLRQGLRKTPGCSMVEIKNEVHSFFS 695

Query: 586 HDKSHEKTQEIYEMLEKLRELVKKKGYVAETEFAINIAEAYKEQSLWYHSEKLALAFGLL 645
              +H  +++IY  LEKL   +K+ GYV +T   + +    KEQ L  HSEKLA++FGLL
Sbjct: 696 GSTAHPDSKKIYAFLEKLICHIKEAGYVPDTNLVLGVENDVKEQLLSTHSEKLAISFGLL 755

Query: 646 TLPAGTPIRIKKNLRTCGDCHTVMKFASEIFAREIIVRDISRFHHFTNGICSCKDYW 703
              AGT I ++KNLR C DCH   K+ S +  REI+VRD+ RFHHF NG CSC DYW
Sbjct: 756 NTTAGTTIHVRKNLRVCADCHNATKYISLVTGREIVVRDMQRFHHFKNGACSCGDYW 809

BLAST of Lsi06G000210 vs. TAIR10
Match: AT4G13650.1 (AT4G13650.1 Pentatricopeptide repeat (PPR) superfamily protein)

HSP 1 Score: 483.4 bits (1243), Expect = 2.3e-136
Identity = 255/658 (38.75%), Postives = 375/658 (56.99%), Query Frame = 1

Query: 46   QIHSQLITTAFLSLPFLFNNLLNLYAKCGSIDQTLLLFSSAPDDSKNVVSWTSLITQFAR 105
            Q+H+      F S   +   LLNLYAKC  I+  L  F     + +NVV W  ++  +  
Sbjct: 410  QLHAYTTKLGFASNNKIEGALLNLYAKCADIETALDYFLET--EVENVVLWNVMLVAYGL 469

Query: 106  SKRPFQALIFFNHMRRSGVYPNHYTFSAVLSASTDTMASVHGDQMHSLVWKHGFHAEVFV 165
                  +   F  M+   + PN YT+ ++L           G+Q+HS + K  F    +V
Sbjct: 470  LDDLRNSFRIFRQMQIEEIVPNQYTYPSILKTCIRLGDLELGEQIHSQIIKTNFQLNAYV 529

Query: 166  ASALVDMYAKCCDMCMAEKVFEEMPVRNLVSWNSMIVGFLQNKLYDRAILFFKSLLLESL 225
             S L+DMYAK   +  A  +      +++VSW +MI G+ Q    D+A+  F+ +L   +
Sbjct: 530  CSVLIDMYAKLGKLDTAWDILIRFAGKDVVSWTTMIAGYTQYNFDDKALTTFRQMLDRGI 589

Query: 226  TALDEVSFSSALSACANVGNLEFGKQVHGVALKLGVRNLVYINNSLIDMYSKCGLFDDVV 285
             + DEV  ++A+SACA +  L+ G+Q+H  A   G  + +   N+L+ +YS+CG  ++  
Sbjct: 590  RS-DEVGLTNAVSACAGLQALKEGQQIHAQACVSGFSSDLPFQNALVTLYSRCGKIEESY 649

Query: 286  KLFSNIGVRDVVTWNIMIMACVYNDNYEDACNSFWMMRREGLIPDEASYSSVLHSCANLA 345
              F      D + WN ++     + N E+A   F  M REG+  +  ++ S + + +  A
Sbjct: 650  LAFEQTEAGDNIAWNALVSGFQQSGNNEEALRVFVRMNREGIDNNNFTFGSAVKAASETA 709

Query: 346  ALYQGTLIHNQIIRSGFVKNLCVASSLITMYAKCGSLVDAFQIFEETEDRNVVCWTAIIT 405
             + QG  +H  I ++G+     V ++LI+MYAKCGS+ DA + F E   +N V W AII 
Sbjct: 710  NMKQGKQVHAVITKTGYDSETEVCNALISMYAKCGSISDAEKQFLEVSTKNEVSWNAIIN 769

Query: 406  ACQQHGHANRVVELFEQMLREGIKPDYITFVSVLSACSHTGRVQEGFFYFNSMIKVHGIY 465
            A  +HG  +  ++ F+QM+   ++P+++T V VLSACSH G V +G  YF SM   +G+ 
Sbjct: 770  AYSKHGFGSEALDSFDQMIHSNVRPNHVTLVGVLSACSHIGLVDKGIAYFESMNSEYGLS 829

Query: 466  PGYEHYACIVDLLGRAGQLDRAKMFIGLMPIKPDASVWGALLSACRNHSNLEMGKEVALE 525
            P  EHY C+VD+L RAG L RAK FI  MPIKPDA VW  LLSAC  H N+E+G+  A  
Sbjct: 830  PKPEHYVCVVDMLTRAGLLSRAKEFIQEMPIKPDALVWRTLLSACVVHKNMEIGEFAAHH 889

Query: 526  LFDLEPDNPGNYVLLCNILTRNGMLNEADEVRKKMETIGVRKEPGCSWIDIKNSTFVFTV 585
            L +LEP++   YVLL N+   +   +  D  R+KM+  GV+KEPG SWI++KNS   F V
Sbjct: 890  LLELEPEDSATYVLLSNLYAVSKKWDARDLTRQKMKEKGVKKEPGQSWIEVKNSIHSFYV 949

Query: 586  HDKSHEKTQEIYEMLEKLRELVKKKGYVAETEFAIN-IAEAYKEQSLWYHSEKLALAFGL 645
             D++H    EI+E  + L +   + GYV +    +N +    K+  ++ HSEKLA++FGL
Sbjct: 950  GDQNHPLADEIHEYFQDLTKRASEIGYVQDCFSLLNELQHEQKDPIIFIHSEKLAISFGL 1009

Query: 646  LTLPAGTPIRIKKNLRTCGDCHTVMKFASEIFAREIIVRDISRFHHFTNGICSCKDYW 703
            L+LPA  PI + KNLR C DCH  +KF S++  REIIVRD  RFHHF  G CSCKDYW
Sbjct: 1010 LSLPATVPINVMKNLRVCNDCHAWIKFVSKVSNREIIVRDAYRFHHFEGGACSCKDYW 1064

BLAST of Lsi06G000210 vs. TAIR10
Match: AT1G16480.1 (AT1G16480.1 Tetratricopeptide repeat (TPR)-like superfamily protein)

HSP 1 Score: 474.6 bits (1220), Expect = 1.1e-133
Identity = 246/676 (36.39%), Postives = 396/676 (58.58%), Query Frame = 1

Query: 29  TSLNSLLNSGRTSKHATQIHSQLITTAFLSLPFLFNNLLNLYAKCGSIDQTLLLFSSAPD 88
           ++L S+L      K    IH  ++   F S+  + N LL +YA  G   +  L+F   P 
Sbjct: 265 STLLSVLGHVDHQKWGRGIHGLVVKMGFDSVVCVCNTLLRMYAGAGRSVEANLVFKQMP- 324

Query: 89  DSKNVVSWTSLITQFARSKRPFQALIFFNHMRRSGVYPNHYTFSAVLSASTDTMASVHGD 148
            +K+++SW SL+  F    R   AL     M  SG   N+ TF++ L+A         G 
Sbjct: 325 -TKDLISWNSLMASFVNDGRSLDALGLLCSMISSGKSVNYVTFTSALAACFTPDFFEKGR 384

Query: 149 QMHSLVWKHGFHAEVFVASALVDMYAKCCDMCMAEKVFEEMPVRNLVSWNSMIVGFLQNK 208
            +H LV   G      + +ALV MY K  +M  + +V  +MP R++V+WN++I G+ +++
Sbjct: 385 ILHGLVVVSGLFYNQIIGNALVSMYGKIGEMSESRRVLLQMPRRDVVAWNALIGGYAEDE 444

Query: 209 LYDRAILFFKSLLLESLTALDEVSFSSALSACANVGNL-EFGKQVHGVALKLGVRNLVYI 268
             D+A+  F+++ +E +++ + ++  S LSAC   G+L E GK +H   +  G  +  ++
Sbjct: 445 DPDKALAAFQTMRVEGVSS-NYITVVSVLSACLLPGDLLERGKPLHAYIVSAGFESDEHV 504

Query: 269 NNSLIDMYSKCGLFDDVVKLFSNIGVRDVVTWNIMIMACVYNDNYEDACNSFWMMRREGL 328
            NSLI MY+KCG       LF+ +  R+++TWN M+ A  ++ + E+       MR  G+
Sbjct: 505 KNSLITMYAKCGDLSSSQDLFNGLDNRNIITWNAMLAANAHHGHGEEVLKLVSKMRSFGV 564

Query: 329 IPDEASYSSVLHSCANLAALYQGTLIHNQIIRSGFVKNLCVASSLITMYAKCGSLVDAFQ 388
             D+ S+S  L + A LA L +G  +H   ++ GF  +  + ++   MY+KCG + +  +
Sbjct: 565 SLDQFSFSEGLSAAAKLAVLEEGQQLHGLAVKLGFEHDSFIFNAAADMYSKCGEIGEVVK 624

Query: 389 IFEETEDRNVVCWTAIITACQQHGHANRVVELFEQMLREGIKPDYITFVSVLSACSHTGR 448
           +   + +R++  W  +I+A  +HG+   V   F +ML  GIKP ++TFVS+L+ACSH G 
Sbjct: 625 MLPPSVNRSLPSWNILISALGRHGYFEEVCATFHEMLEMGIKPGHVTFVSLLTACSHGGL 684

Query: 449 VQEGFFYFNSMIKVHGIYPGYEHYACIVDLLGRAGQLDRAKMFIGLMPIKPDASVWGALL 508
           V +G  Y++ + +  G+ P  EH  C++DLLGR+G+L  A+ FI  MP+KP+  VW +LL
Sbjct: 685 VDKGLAYYDMIARDFGLEPAIEHCICVIDLLGRSGRLAEAETFISKMPMKPNDLVWRSLL 744

Query: 509 SACRNHSNLEMGKEVALELFDLEPDNPGNYVLLCNILTRNGMLNEADEVRKKMETIGVRK 568
           ++C+ H NL+ G++ A  L  LEP++   YVL  N+    G   + + VRK+M    ++K
Sbjct: 745 ASCKIHGNLDRGRKAAENLSKLEPEDDSVYVLSSNMFATTGRWEDVENVRKQMGFKNIKK 804

Query: 569 EPGCSWIDIKNSTFVFTVHDKSHEKTQEIYEMLEKLRELVKKKGYVAETEFAI-NIAEAY 628
           +  CSW+ +K+    F + D++H +T EIY  LE +++L+K+ GYVA+T  A+ +  E  
Sbjct: 805 KQACSWVKLKDKVSSFGIGDRTHPQTMEIYAKLEDIKKLIKESGYVADTSQALQDTDEEQ 864

Query: 629 KEQSLWYHSEKLALAFGLLTLPAGTPIRIKKNLRTCGDCHTVMKFASEIFAREIIVRDIS 688
           KE +LW HSE+LALA+ L++ P G+ +RI KNLR C DCH+V KF S +  R I++RD  
Sbjct: 865 KEHNLWNHSERLALAYALMSTPEGSTVRIFKNLRICSDCHSVYKFVSRVIGRRIVLRDQY 924

Query: 689 RFHHFTNGICSCKDYW 703
           RFHHF  G+CSCKDYW
Sbjct: 925 RFHHFERGLCSCKDYW 937

BLAST of Lsi06G000210 vs. TAIR10
Match: AT4G14850.1 (AT4G14850.1 Pentatricopeptide repeat (PPR) superfamily protein)

HSP 1 Score: 472.2 bits (1214), Expect = 5.4e-133
Identity = 262/647 (40.49%), Postives = 375/647 (57.96%), Query Frame = 1

Query: 60  PFLFNNLLNLYAKCGSIDQTLLLFSSAPDDSKNVVSWTSLITQFARSKRPFQALIFFNHM 119
           PFL N L+N+Y+K    +   L+    P  ++NVVSWTSLI+  A++     AL+ F  M
Sbjct: 42  PFLANYLINMYSKLDHPESARLVLRLTP--ARNVVSWTSLISGLAQNGHFSTALVEFFEM 101

Query: 120 RRSGVYPNHYTFSAVLSASTDTMASVHGDQMHSLVWKHGFHAEVFVASALVDMYAKCCDM 179
           RR GV PN +TF     A       V G Q+H+L  K G   +VFV  +  DMY K    
Sbjct: 102 RREGVVPNDFTFPCAFKAVASLRLPVTGKQIHALAVKCGRILDVFVGCSAFDMYCKTRLR 161

Query: 180 CMAEKVFEEMPVRNLVSWNSMIVGFLQNKLYDRAI-LFFKSLLLESLTALDEVSFSSALS 239
             A K+F+E+P RNL +WN+ I   + +     AI  F +   ++     + ++F + L+
Sbjct: 162 DDARKLFDEIPERNLETWNAFISNSVTDGRPREAIEAFIEFRRIDGHP--NSITFCAFLN 221

Query: 240 ACANVGNLEFGKQVHGVALKLGVRNLVYINNSLIDMYSKCGLFDDVVKLFSNIGVRDVVT 299
           AC++  +L  G Q+HG+ L+ G    V + N LID Y KC        +F+ +G ++ V+
Sbjct: 222 ACSDWLHLNLGMQLHGLVLRSGFDTDVSVCNGLIDFYGKCKQIRSSEIIFTEMGTKNAVS 281

Query: 300 WNIMIMACVYNDNYEDACNSFWMMRREGLIPDEASYSSVLHSCANLAALYQGTLIHNQII 359
           W  ++ A V N   E A   +   R++ +   +   SSVL +CA +A L  G  IH   +
Sbjct: 282 WCSLVAAYVQNHEDEKASVLYLRSRKDIVETSDFMISSVLSACAGMAGLELGRSIHAHAV 341

Query: 360 RSGFVKNLCVASSLITMYAKCGSLVDAFQIFEETEDRNVVCWTAIITACQQHGHANRVVE 419
           ++   + + V S+L+ MY KCG + D+ Q F+E  ++N+V   ++I      G  +  + 
Sbjct: 342 KACVERTIFVGSALVDMYGKCGCIEDSEQAFDEMPEKNLVTRNSLIGGYAHQGQVDMALA 401

Query: 420 LFEQMLREGI--KPDYITFVSVLSACSHTGRVQEGFFYFNSMIKVHGIYPGYEHYACIVD 479
           LFE+M   G    P+Y+TFVS+LSACS  G V+ G   F+SM   +GI PG EHY+CIVD
Sbjct: 402 LFEEMAPRGCGPTPNYMTFVSLLSACSRAGAVENGMKIFDSMRSTYGIEPGAEHYSCIVD 461

Query: 480 LLGRAGQLDRAKMFIGLMPIKPDASVWGALLSACRNHSNLEMGKEVALELFDLEPDNPGN 539
           +LGRAG ++RA  FI  MPI+P  SVWGAL +ACR H   ++G   A  LF L+P + GN
Sbjct: 462 MLGRAGMVERAYEFIKKMPIQPTISVWGALQNACRMHGKPQLGLLAAENLFKLDPKDSGN 521

Query: 540 YVLLCNILTRNGMLNEADEVRKKMETIGVRKEPGCSWIDIKNSTFVFTVHDKSHEKTQEI 599
           +VLL N     G   EA+ VR++++ +G++K  G SWI +KN    F   D+SH   +EI
Sbjct: 522 HVLLSNTFAAAGRWAEANTVREELKGVGIKKGAGYSWITVKNQVHAFQAKDRSHILNKEI 581

Query: 600 YEMLEKLRELVKKKGYVAETEFAI-NIAEAYKEQSLWYHSEKLALAFGLLTLPAGTPIRI 659
              L KLR  ++  GY  + + ++ ++ E  K   + +HSEKLALAFGLL+LP   PIRI
Sbjct: 582 QTTLAKLRNEMEAAGYKPDLKLSLYDLEEEEKAAEVSHHSEKLALAFGLLSLPLSVPIRI 641

Query: 660 KKNLRTCGDCHTVMKFASEIFAREIIVRDISRFHHFTNGICSCKDYW 703
            KNLR CGDCH+  KF S    REIIVRD +RFH F +GICSCKDYW
Sbjct: 642 TKNLRICGDCHSFFKFVSGSVKREIIVRDNNRFHRFKDGICSCKDYW 684

BLAST of Lsi06G000210 vs. NCBI nr
Match: gi|778662180|ref|XP_011659482.1| (PREDICTED: pentatricopeptide repeat-containing protein At3g24000, mitochondrial-like [Cucumis sativus])

HSP 1 Score: 1302.0 bits (3368), Expect = 0.0e+00
Identity = 638/699 (91.27%), Postives = 661/699 (94.56%), Query Frame = 1

Query: 4   SKLPLYPNLNFFKSHYHQNPFLHPPTSLNSLLNSGRTSKHATQIHSQLITTAFLSLPFLF 63
           SKLPL+PNL+FFKSHYHQ PFLHP TSLNSLLN  RTSKHATQIHSQLITTA LSLPFLF
Sbjct: 6   SKLPLHPNLSFFKSHYHQTPFLHPLTSLNSLLNCSRTSKHATQIHSQLITTALLSLPFLF 65

Query: 64  NNLLNLYAKCGSIDQTLLLFSSAPDDSKNVVSWTSLITQFARSKRPFQALIFFNHMRRSG 123
           NNLLNLYAKCGS+DQTLLLFSSAPDDSKNVVSWTSLITQ  R KRPF+AL FFNHMRRSG
Sbjct: 66  NNLLNLYAKCGSVDQTLLLFSSAPDDSKNVVSWTSLITQLTRFKRPFKALTFFNHMRRSG 125

Query: 124 VYPNHYTFSAVLSASTDTMASVHGDQMHSLVWKHGFHAEVFVASALVDMYAKCCDMCMAE 183
           VYPNHYTFSAVLSA TDT ASVHG+QMHSLVWKHGF AEVFV SALVDMYAKCCDM MAE
Sbjct: 126 VYPNHYTFSAVLSACTDTTASVHGEQMHSLVWKHGFLAEVFVVSALVDMYAKCCDMLMAE 185

Query: 184 KVFEEMPVRNLVSWNSMIVGFLQNKLYDRAILFFKSLLLESLTALDEVSFSSALSACANV 243
           KVFEEMPVRNLVSWN+MIVGFLQNKLYD+AI FFK+LLLE+LTALDEVSFSS  SACAN 
Sbjct: 186 KVFEEMPVRNLVSWNTMIVGFLQNKLYDQAIFFFKTLLLENLTALDEVSFSSVFSACANA 245

Query: 244 GNLEFGKQVHGVALKLGVRNLVYINNSLIDMYSKCGLFDDVVKLFSNIGVRDVVTWNIMI 303
           GNLEFGKQVHGVALKLGV NLVYINNSL DMY KCGLF+DV KLFSN G RDVVTWNIMI
Sbjct: 246 GNLEFGKQVHGVALKLGVWNLVYINNSLSDMYGKCGLFNDVAKLFSNTGARDVVTWNIMI 305

Query: 304 MACVYNDNYEDACNSFWMMRREGLIPDEASYSSVLHSCANLAALYQGTLIHNQIIRSGFV 363
           MA VYN NYEDACNSFWMMRR+G IPDEASYSSVLHSCANLAALYQGTLIHNQIIRSGFV
Sbjct: 306 MAYVYNHNYEDACNSFWMMRRKGSIPDEASYSSVLHSCANLAALYQGTLIHNQIIRSGFV 365

Query: 364 KNLCVASSLITMYAKCGSLVDAFQIFEETEDRNVVCWTAIITACQQHGHANRVVELFEQM 423
           KNL VASSLITMYAKCGSLVDAFQIFEETEDRNVVCWTAII ACQQHGHAN VVELFEQM
Sbjct: 366 KNLRVASSLITMYAKCGSLVDAFQIFEETEDRNVVCWTAIIAACQQHGHANWVVELFEQM 425

Query: 424 LREGIKPDYITFVSVLSACSHTGRVQEGFFYFNSMIKVHGIYPGYEHYACIVDLLGRAGQ 483
           LREGIKPDYITFVSVLSACSHTGRV+EGFFYFNSMIKVHGIYPG+EHYACIVDLL RAG+
Sbjct: 426 LREGIKPDYITFVSVLSACSHTGRVEEGFFYFNSMIKVHGIYPGHEHYACIVDLLSRAGE 485

Query: 484 LDRAKMFIGLMPIKPDASVWGALLSACRNHSNLEMGKEVALELFDLEPDNPGNYVLLCNI 543
           LDRAK FI LMPIKPDASVWGALLSACRNHSNL MGKEVAL+LFDLEPDNPGNYVLLCNI
Sbjct: 486 LDRAKRFIELMPIKPDASVWGALLSACRNHSNLIMGKEVALKLFDLEPDNPGNYVLLCNI 545

Query: 544 LTRNGMLNEADEVRKKMETIGVRKEPGCSWIDIKNSTFVFTVHDKSHEKTQEIYEMLEKL 603
           LTRNGMLNEADEVR+KME+IGVRKEPGCSWIDIKNST+VFTVHDKSHEKT+EIYEMLEKL
Sbjct: 546 LTRNGMLNEADEVRRKMESIGVRKEPGCSWIDIKNSTYVFTVHDKSHEKTKEIYEMLEKL 605

Query: 604 RELVKKKGYVAETEFAINIAEAYKEQSLWYHSEKLALAFGLLTLPAGTPIRIKKNLRTCG 663
           +ELVKKKGYVAETEFAIN AE YKEQSLWYHSEK+ALAFGLL+LPAG PIRIKKNLRTCG
Sbjct: 606 KELVKKKGYVAETEFAINTAEEYKEQSLWYHSEKIALAFGLLSLPAGAPIRIKKNLRTCG 665

Query: 664 DCHTVMKFASEIFAREIIVRDISRFHHFTNGICSCKDYW 703
           DCHTVMKFASEIFAREIIVRDI+RFHHFTNGICSC DYW
Sbjct: 666 DCHTVMKFASEIFAREIIVRDINRFHHFTNGICSCGDYW 704

BLAST of Lsi06G000210 vs. NCBI nr
Match: gi|659099256|ref|XP_008450508.1| (PREDICTED: pentatricopeptide repeat-containing protein At3g24000, mitochondrial-like [Cucumis melo])

HSP 1 Score: 1291.2 bits (3340), Expect = 0.0e+00
Identity = 627/699 (89.70%), Postives = 660/699 (94.42%), Query Frame = 1

Query: 4   SKLPLYPNLNFFKSHYHQNPFLHPPTSLNSLLNSGRTSKHATQIHSQLITTAFLSLPFLF 63
           SKL LYPNL+FFKSH+H+ PF HPPTS N+LLNSGRTSKHATQIHSQLITTA LSLPFLF
Sbjct: 6   SKLSLYPNLSFFKSHHHRTPFHHPPTSFNNLLNSGRTSKHATQIHSQLITTALLSLPFLF 65

Query: 64  NNLLNLYAKCGSIDQTLLLFSSAPDDSKNVVSWTSLITQFARSKRPFQALIFFNHMRRSG 123
           NNLLNLYAKCG +DQTLLLFSSAPD SK+VVSWTSLITQ  RSKRPF+AL FFN MR SG
Sbjct: 66  NNLLNLYAKCGCVDQTLLLFSSAPDVSKDVVSWTSLITQLTRSKRPFKALTFFNQMRLSG 125

Query: 124 VYPNHYTFSAVLSASTDTMASVHGDQMHSLVWKHGFHAEVFVASALVDMYAKCCDMCMAE 183
           VYPNHYT SAVLSA TDTM SVHG+QMHSLVWKHGFHAEVFV SALVDMYAKCCDM MAE
Sbjct: 126 VYPNHYTLSAVLSACTDTMVSVHGEQMHSLVWKHGFHAEVFVVSALVDMYAKCCDMRMAE 185

Query: 184 KVFEEMPVRNLVSWNSMIVGFLQNKLYDRAILFFKSLLLESLTALDEVSFSSALSACANV 243
           KVFEEMPVRNLVSWNSMIVGFLQNKLYD+AI FFK+LLLE+LTALDEVSFSS  SACAN 
Sbjct: 186 KVFEEMPVRNLVSWNSMIVGFLQNKLYDQAIFFFKTLLLENLTALDEVSFSSVFSACANA 245

Query: 244 GNLEFGKQVHGVALKLGVRNLVYINNSLIDMYSKCGLFDDVVKLFSNIGVRDVVTWNIMI 303
           GNL FGKQVHGVALKLGVRNLVYINNSLIDMYSKCGLF++V KLFSNIG RDVVTWNIMI
Sbjct: 246 GNLAFGKQVHGVALKLGVRNLVYINNSLIDMYSKCGLFNEVAKLFSNIGARDVVTWNIMI 305

Query: 304 MACVYNDNYEDACNSFWMMRREGLIPDEASYSSVLHSCANLAALYQGTLIHNQIIRSGFV 363
           MACV+N NYEDACNSFWMMR++G IPDEASYSSVLHSCANLA LYQGTLIHNQIIRSGFV
Sbjct: 306 MACVHNHNYEDACNSFWMMRKKGSIPDEASYSSVLHSCANLATLYQGTLIHNQIIRSGFV 365

Query: 364 KNLCVASSLITMYAKCGSLVDAFQIFEETEDRNVVCWTAIITACQQHGHANRVVELFEQM 423
           KNLCVASSLI MYAKCGSLVDAFQIFEE EDRNVVCWTAIITACQQHGHANRVVELFEQM
Sbjct: 366 KNLCVASSLIKMYAKCGSLVDAFQIFEEIEDRNVVCWTAIITACQQHGHANRVVELFEQM 425

Query: 424 LREGIKPDYITFVSVLSACSHTGRVQEGFFYFNSMIKVHGIYPGYEHYACIVDLLGRAGQ 483
           LREGIKPDYITFVSVLSACSHTGRV+EGFFYFNSMIK+HGI+PG+EHYACIVDLL RAG+
Sbjct: 426 LREGIKPDYITFVSVLSACSHTGRVEEGFFYFNSMIKLHGIFPGHEHYACIVDLLSRAGE 485

Query: 484 LDRAKMFIGLMPIKPDASVWGALLSACRNHSNLEMGKEVALELFDLEPDNPGNYVLLCNI 543
           L+RAK FI LMPIKPDASVWGALLSACRNHSNL MGKEVAL+LF+LEPDNPGNYVLLCNI
Sbjct: 486 LNRAKRFIELMPIKPDASVWGALLSACRNHSNLVMGKEVALKLFELEPDNPGNYVLLCNI 545

Query: 544 LTRNGMLNEADEVRKKMETIGVRKEPGCSWIDIKNSTFVFTVHDKSHEKTQEIYEMLEKL 603
           LTRNGMLNEAD+VR+KME IGVRKEPGCSWID+KNST+VFTVHDKSHEKT+EIYEMLE L
Sbjct: 546 LTRNGMLNEADKVRRKMERIGVRKEPGCSWIDVKNSTYVFTVHDKSHEKTKEIYEMLENL 605

Query: 604 RELVKKKGYVAETEFAINIAEAYKEQSLWYHSEKLALAFGLLTLPAGTPIRIKKNLRTCG 663
           +ELVKKKGYVAETEFAIN AE YKEQSLWYH+EKLALAFGLL+LPAG PIRIKKNLRTCG
Sbjct: 606 KELVKKKGYVAETEFAINTAEEYKEQSLWYHTEKLALAFGLLSLPAGAPIRIKKNLRTCG 665

Query: 664 DCHTVMKFASEIFAREIIVRDISRFHHFTNGICSCKDYW 703
           DCHTVMKFASEIFAREIIVRDI+RFHHFTNGICSC DYW
Sbjct: 666 DCHTVMKFASEIFAREIIVRDINRFHHFTNGICSCGDYW 704

BLAST of Lsi06G000210 vs. NCBI nr
Match: gi|700210899|gb|KGN65995.1| (hypothetical protein Csa_1G560780 [Cucumis sativus])

HSP 1 Score: 999.2 bits (2582), Expect = 3.6e-288
Identity = 523/700 (74.71%), Postives = 566/700 (80.86%), Query Frame = 1

Query: 4   SKLPLYPNLNFFKSHYHQNPFLHPPTSLNSLLNSGRTSKHATQIHSQLITTAFLSLPFLF 63
           SKLPL+PNL+FFKSHYHQ PFLHP TSLNSLLN  RTSKHATQIHSQLI           
Sbjct: 6   SKLPLHPNLSFFKSHYHQTPFLHPLTSLNSLLNCSRTSKHATQIHSQLI----------- 65

Query: 64  NNLLNLYAKCGSIDQTLLLFSSAPDDSKNVVSWTSLITQFARSKRPFQALIFFNHMRRSG 123
                          T LL  S P        + +L+  +A+     Q L+ F+      
Sbjct: 66  --------------TTALL--SLP------FLFNNLLNLYAKCGSVDQTLLLFSSAPDDS 125

Query: 124 VYPNHYTFSAVLSASTDTMASVHGDQMHSLVWKHGFHAEVFVASALVDMYAKCCDMCMAE 183
              N  +++++++  T            + + + G +   +  SA++      C    A 
Sbjct: 126 --KNVVSWTSLITQLTRFKRPFKALTFFNHMRRSGVYPNHYTFSAVLS----ACTDTTAS 185

Query: 184 KVFEEMPVRNLVSWNSMIVGFL-QNKLYDRAILFFKSLLLESLTALDEVSFSSALSACAN 243
              E+M   +LV W     GFL +NKLYD+AI FFK+LLLE+LTALDEVSFSS  SACAN
Sbjct: 186 VHGEQM--HSLV-WKH---GFLAENKLYDQAIFFFKTLLLENLTALDEVSFSSVFSACAN 245

Query: 244 VGNLEFGKQVHGVALKLGVRNLVYINNSLIDMYSKCGLFDDVVKLFSNIGVRDVVTWNIM 303
            GNLEFGKQVHGVALKLGV NLVYINNSL DMY KCGLF+DV KLFSN G RDVVTWNIM
Sbjct: 246 AGNLEFGKQVHGVALKLGVWNLVYINNSLSDMYGKCGLFNDVAKLFSNTGARDVVTWNIM 305

Query: 304 IMACVYNDNYEDACNSFWMMRREGLIPDEASYSSVLHSCANLAALYQGTLIHNQIIRSGF 363
           IMA VYN NYEDACNSFWMMRR+G IPDEASYSSVLHSCANLAALYQGTLIHNQIIRSGF
Sbjct: 306 IMAYVYNHNYEDACNSFWMMRRKGSIPDEASYSSVLHSCANLAALYQGTLIHNQIIRSGF 365

Query: 364 VKNLCVASSLITMYAKCGSLVDAFQIFEETEDRNVVCWTAIITACQQHGHANRVVELFEQ 423
           VKNL VASSLITMYAKCGSLVDAFQIFEETEDRNVVCWTAII ACQQHGHAN VVELFEQ
Sbjct: 366 VKNLRVASSLITMYAKCGSLVDAFQIFEETEDRNVVCWTAIIAACQQHGHANWVVELFEQ 425

Query: 424 MLREGIKPDYITFVSVLSACSHTGRVQEGFFYFNSMIKVHGIYPGYEHYACIVDLLGRAG 483
           MLREGIKPDYITFVSVLSACSHTGRV+EGFFYFNSMIKVHGIYPG+EHYACIVDLL RAG
Sbjct: 426 MLREGIKPDYITFVSVLSACSHTGRVEEGFFYFNSMIKVHGIYPGHEHYACIVDLLSRAG 485

Query: 484 QLDRAKMFIGLMPIKPDASVWGALLSACRNHSNLEMGKEVALELFDLEPDNPGNYVLLCN 543
           +LDRAK FI LMPIKPDASVWGALLSACRNHSNL MGKEVAL+LFDLEPDNPGNYVLLCN
Sbjct: 486 ELDRAKRFIELMPIKPDASVWGALLSACRNHSNLIMGKEVALKLFDLEPDNPGNYVLLCN 545

Query: 544 ILTRNGMLNEADEVRKKMETIGVRKEPGCSWIDIKNSTFVFTVHDKSHEKTQEIYEMLEK 603
           ILTRNGMLNEADEVR+KME+IGVRKEPGCSWIDIKNST+VFTVHDKSHEKT+EIYEMLEK
Sbjct: 546 ILTRNGMLNEADEVRRKMESIGVRKEPGCSWIDIKNSTYVFTVHDKSHEKTKEIYEMLEK 605

Query: 604 LRELVKKKGYVAETEFAINIAEAYKEQSLWYHSEKLALAFGLLTLPAGTPIRIKKNLRTC 663
           L+ELVKKKGYVAETEFAIN AE YKEQSLWYHSEK+ALAFGLL+LPAG PIRIKKNLRTC
Sbjct: 606 LKELVKKKGYVAETEFAINTAEEYKEQSLWYHSEKIALAFGLLSLPAGAPIRIKKNLRTC 660

Query: 664 GDCHTVMKFASEIFAREIIVRDISRFHHFTNGICSCKDYW 703
           GDCHTVMKFASEIFAREIIVRDI+RFHHFTNGICSC DYW
Sbjct: 666 GDCHTVMKFASEIFAREIIVRDINRFHHFTNGICSCGDYW 660

BLAST of Lsi06G000210 vs. NCBI nr
Match: gi|1009116486|ref|XP_015874799.1| (PREDICTED: putative pentatricopeptide repeat-containing protein At5g52630 [Ziziphus jujuba])

HSP 1 Score: 969.1 bits (2504), Expect = 4.0e-279
Identity = 461/692 (66.62%), Postives = 561/692 (81.07%), Query Frame = 1

Query: 14  FFKSHYHQNPFLHPPTSLNSLLNS---GRTSKHATQIHSQLITTAFLSLPFLFNNLLNLY 73
           F +++++Q      PT LN LLN+    +  KH +QIH+QLI TA++ LPFLFNNLLN Y
Sbjct: 21  FHRTNHYQTSSAPYPTHLNHLLNTTIQSKNLKHVSQIHAQLIPTAYIFLPFLFNNLLNSY 80

Query: 74  AKCGSIDQTLLLFSSAPDDSKNVVSWTSLITQFARSKRPFQALIFFNHMRRSGVYPNHYT 133
           AKCG I+Q+LLLFS++    KN+V+WTSLITQ + S RPF+AL FFN MR S VYPNH+T
Sbjct: 81  AKCGLINQSLLLFSASHGVPKNIVTWTSLITQLSHSHRPFEALAFFNRMRCSAVYPNHFT 140

Query: 134 FSAVLSASTDTMASVHGDQMHSLVWKHGFHAEVFVASALVDMYAKCCDMCMAEKVFEEMP 193
           FSA+LSA  DTM   HG+Q+H L+WKHGF A VFV SALVDMYAK  +M +AE+VF+EMP
Sbjct: 141 FSAILSACADTMIVFHGEQLHCLIWKHGFDAHVFVCSALVDMYAKSSEMTLAERVFDEMP 200

Query: 194 VRNLVSWNSMIVGFLQNKLYDRAILFFKSLLLESLTALDEVSFSSALSACANVGNLEFGK 253
            RNLVSWNSMIVGFLQN+LYD+A+ FF+ +  ES  + D+VSFSS LSACAN+G LEFG+
Sbjct: 201 ERNLVSWNSMIVGFLQNELYDQAVEFFREVHRESEVSPDQVSFSSVLSACANMGALEFGR 260

Query: 254 QVHGVALKLGVRNLVYINNSLIDMYSKCGLFDDVVKLFSNIGVRDVVTWNIMIMACVYND 313
           QVHG+  K G+  L Y+ NSL+DMY KCG   D   LF  IG RDVV+WN+M++ C+ N 
Sbjct: 261 QVHGIGFKQGLVTLTYVKNSLVDMYCKCGWLADAANLFWTIGERDVVSWNVMVIGCICNH 320

Query: 314 NYEDACNSFWMMRREGLIPDEASYSSVLHSCANLAALYQGTLIHNQIIRSGFVKNLCVAS 373
            +EDACN FW+MRREG+ PDE SY SVL++ A+LAAL QGTLIH+QII+SGF K+ CV+S
Sbjct: 321 KFEDACNYFWVMRREGITPDEVSYCSVLNASASLAALDQGTLIHDQIIKSGFAKSACVSS 380

Query: 374 SLITMYAKCGSLVDAFQIFEETEDRNVVCWTAIITACQQHGHANRVVELFEQMLREGIKP 433
           SLITMYAKCGSL+DA+++F ET++RNVVCWTA++ A QQHG AN+V+ELFE+ML E +KP
Sbjct: 381 SLITMYAKCGSLIDAYRMFNETDERNVVCWTAMLAAYQQHGCANQVIELFEKMLEEEMKP 440

Query: 434 DYITFVSVLSACSHTGRVQEGFFYFNSMIKVHGIYPGYEHYACIVDLLGRAGQLDRAKMF 493
           +Y+T+VS LSACSHTGR+++GF YF+SM KVHGI PG EHYAC+VDLLGRAG+LD A+ F
Sbjct: 441 NYVTYVSALSACSHTGRIEKGFKYFDSMTKVHGINPGREHYACMVDLLGRAGRLDEARRF 500

Query: 494 IGLMPIKPDASVWGALLSACRNHSNLEMGKEVALELFDLEPDNPGNYVLLCNILTRNGML 553
           I  +P+KP+AS+WGALL AC  + N++MG+EVA  LF+LEP+NPGNY+LL N+ TR G L
Sbjct: 501 IETIPVKPNASIWGALLGACMKYDNIKMGREVAERLFELEPNNPGNYLLLSNMYTRKGRL 560

Query: 554 NEADEVRKKMETIGVRKEPGCSWIDIKNSTFVFTVHDKSHEKTQEIYEMLEKLRELVKKK 613
            EADEVR+ M   GVRKEPGCSWID+KN TFVFTVHD+S+ +  +IYEML KLREL+KKK
Sbjct: 561 EEADEVRRLMGVNGVRKEPGCSWIDVKNRTFVFTVHDRSNSRNDKIYEMLRKLRELMKKK 620

Query: 614 GYVAETEFAINIAEAYKEQSLWYHSEKLALAFGLLTLPAGTPIRIKKNLRTCGDCHTVMK 673
           GYVAET+FA N     KEQ LWYHSEKLALAFGLLTLPA  PIRIKKNLRTCGDCHT MK
Sbjct: 621 GYVAETQFANNSMVKSKEQDLWYHSEKLALAFGLLTLPAKAPIRIKKNLRTCGDCHTFMK 680

Query: 674 FASEIFAREIIVRDISRFHHFTNGICSCKDYW 703
           FASEIF REIIVRD++RFH FTNG CSC DYW
Sbjct: 681 FASEIFLREIIVRDVNRFHRFTNGFCSCGDYW 712

BLAST of Lsi06G000210 vs. NCBI nr
Match: gi|720076691|ref|XP_010240804.1| (PREDICTED: putative pentatricopeptide repeat-containing protein At3g13770, mitochondrial [Nelumbo nucifera])

HSP 1 Score: 964.9 bits (2493), Expect = 7.5e-278
Identity = 469/705 (66.52%), Postives = 564/705 (80.00%), Query Frame = 1

Query: 2   TSSKLPL-YPNLNFFKSHYHQNPFLHPPTSLNSLLNSGRTSK---HATQIHSQLITTAFL 61
           TS+  PL +   + F S  HQ     P T LN+LLNS   +K   HATQIH+Q+I   + 
Sbjct: 15  TSTTTPLSHSTSSPFTSSSHQTCSFSP-THLNTLLNSTAQTKSFRHATQIHAQIIINNYS 74

Query: 62  SLPFLFNNLLNLYAKCGSIDQTLLLFSSAPDDSKNVVSWTSLITQFARSKRPFQALIFFN 121
           SL FLFNNL+NLYA  G I+Q++L+FS+   D+KN+V+WTSLI Q + + +PF++L  FN
Sbjct: 75  SLTFLFNNLINLYAISGHINQSVLVFSNIHHDTKNIVTWTSLIAQLSHAHKPFESLALFN 134

Query: 122 HMRRSGVYPNHYTFSAVLSASTDTMASVHGDQMHSLVWKHGFHAEVFVASALVDMYAKCC 181
            M  SG  PNH+TFSA+LSA  DT   VHG Q+HSL+ KHGF  +VFV SA++DMYAKC 
Sbjct: 135 QMGSSGTRPNHFTFSAILSACADTTIIVHGQQIHSLIHKHGFGTDVFVGSAMIDMYAKCS 194

Query: 182 DMCMAEKVFEEMPVRNLVSWNSMIVGFLQNKLYDRAILFFKSLLLESLTALDEVSFSSAL 241
           +M  AEKVF+EMP RNLVSWN+MIVGF  NK++DRAI  FK +L +   + D+VSFSS L
Sbjct: 195 NMDSAEKVFDEMPERNLVSWNAMIVGFSHNKIFDRAIDVFKEVLRDKSVSPDQVSFSSVL 254

Query: 242 SACANVGNLEFGKQVHGVALKLGVRNLVYINNSLIDMYSKCGLFDDVVKLFSNIGVRDVV 301
           SACANVG+L+FG+QVHGV +K G+ +L Y+ NSL+DMY+KCG F D ++LF +I  RDVV
Sbjct: 255 SACANVGSLDFGRQVHGVVVKHGLMHLAYVKNSLVDMYNKCGCFQDSIQLFGSIPDRDVV 314

Query: 302 TWNIMIMACVYNDNYEDACNSFWMMRREGLIPDEASYSSVLHSCANLAALYQGTLIHNQI 361
           TWN+M M CV ND +E+ACN FW+MRREG+ PDEAS+S+ LH+ ANLAAL QGTLIH+QI
Sbjct: 315 TWNVMAMGCVQNDRFEEACNYFWVMRREGISPDEASFSTALHASANLAALDQGTLIHDQI 374

Query: 362 IRSGFVKNLCVASSLITMYAKCGSLVDAFQIFEETEDRNVVCWTAIITACQQHGHANRVV 421
           I++G++KN CV SSLITMYAKCGSL+DA ++FEE EDRNVVCWTA+I ACQQHG    V+
Sbjct: 375 IKTGYMKNTCVGSSLITMYAKCGSLIDAHRVFEEIEDRNVVCWTAMIAACQQHGCGGSVI 434

Query: 422 ELFEQMLREGIKPDYITFVSVLSACSHTGRVQEGFFYFNSMIKVHGIYPGYEHYACIVDL 481
           ELFE+ML EGIKPDYITFV VLSACSHTGRV+EGF YF SM +VHG+ PG EHYAC+VD+
Sbjct: 435 ELFEEMLAEGIKPDYITFVCVLSACSHTGRVEEGFGYFESMGRVHGMKPGPEHYACMVDM 494

Query: 482 LGRAGQLDRAKMFIGLMPIKPDASVWGALLSACRNHSNLEMGKEVALELFDLEPDNPGNY 541
           LGR+G+LD AK FI  MPI+PD SVWGALL ACRN+  L+MGKEVA +LF++EP+NPGNY
Sbjct: 495 LGRSGRLDEAKRFIESMPIRPDPSVWGALLGACRNYGYLDMGKEVAEKLFEMEPNNPGNY 554

Query: 542 VLLCNILTRNGMLNEADEVRKKMETIGVRKEPGCSWIDIKNSTFVFTVHDKSHEKTQEIY 601
           VLL NI T  G L EA E+R+ M   G RKEPGCSWIDIKN+T VFTVHDKSH +T EIY
Sbjct: 555 VLLSNIYTHYGKLEEAKEIRRLMGINGARKEPGCSWIDIKNTTHVFTVHDKSHSRTDEIY 614

Query: 602 EMLEKLRELVKKKGYVAETEFAINIAEAYKEQSLWYHSEKLALAFGLLTLPAGTPIRIKK 661
           EML K+ ELVKKKGYVAET+FA+N  E+YKEQSLWYHSEKLALAFGLL+LPAG PIRIKK
Sbjct: 615 EMLSKMIELVKKKGYVAETQFAVNDVESYKEQSLWYHSEKLALAFGLLSLPAGAPIRIKK 674

Query: 662 NLRTCGDCHTVMKFASEIFAREIIVRDISRFHHFTNGICSCKDYW 703
           NLRTCGDCHTVMK ASEIF REI+VRDI+RFH F +G CSC DYW
Sbjct: 675 NLRTCGDCHTVMKLASEIFEREIVVRDINRFHRFVSGSCSCGDYW 718

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
PP168_ARATH4.3e-14038.84Pentatricopeptide repeat-containing protein At2g22070 OS=Arabidopsis thaliana GN... [more]
PPR32_ARATH6.9e-13839.88Pentatricopeptide repeat-containing protein At1g11290, chloroplastic OS=Arabidop... [more]
PP307_ARATH4.2e-13538.75Pentatricopeptide repeat-containing protein At4g13650 OS=Arabidopsis thaliana GN... [more]
PP312_ARATH9.6e-13240.49Pentatricopeptide repeat-containing protein At4g14850 OS=Arabidopsis thaliana GN... [more]
PP272_ARATH3.6e-13139.87Pentatricopeptide repeat-containing protein At3g49170, chloroplastic OS=Arabidop... [more]
Match NameE-valueIdentityDescription
A0A0A0LVV0_CUCSA2.5e-28874.71Uncharacterized protein OS=Cucumis sativus GN=Csa_1G560780 PE=4 SV=1[more]
A0A061F539_THECC9.6e-27266.47Tetratricopeptide repeat superfamily protein OS=Theobroma cacao GN=TCM_026848 PE... [more]
A5AZT2_VITVI2.1e-26364.60Putative uncharacterized protein OS=Vitis vinifera GN=VITISV_023383 PE=4 SV=1[more]
A0A059D2Q4_EUCGR1.8e-25761.13Uncharacterized protein OS=Eucalyptus grandis GN=EUGRSUZ_B01821 PE=4 SV=1[more]
A0A0D2VD66_GOSRA1.6e-25563.32Uncharacterized protein OS=Gossypium raimondii GN=B456_013G131400 PE=4 SV=1[more]
Match NameE-valueIdentityDescription
AT2G22070.12.4e-14138.84 pentatricopeptide (PPR) repeat-containing protein[more]
AT1G11290.13.9e-13939.88 Pentatricopeptide repeat (PPR) superfamily protein[more]
AT4G13650.12.3e-13638.75 Pentatricopeptide repeat (PPR) superfamily protein[more]
AT1G16480.11.1e-13336.39 Tetratricopeptide repeat (TPR)-like superfamily protein[more]
AT4G14850.15.4e-13340.49 Pentatricopeptide repeat (PPR) superfamily protein[more]
Match NameE-valueIdentityDescription
gi|778662180|ref|XP_011659482.1|0.0e+0091.27PREDICTED: pentatricopeptide repeat-containing protein At3g24000, mitochondrial-... [more]
gi|659099256|ref|XP_008450508.1|0.0e+0089.70PREDICTED: pentatricopeptide repeat-containing protein At3g24000, mitochondrial-... [more]
gi|700210899|gb|KGN65995.1|3.6e-28874.71hypothetical protein Csa_1G560780 [Cucumis sativus][more]
gi|1009116486|ref|XP_015874799.1|4.0e-27966.62PREDICTED: putative pentatricopeptide repeat-containing protein At5g52630 [Zizip... [more]
gi|720076691|ref|XP_010240804.1|7.5e-27866.52PREDICTED: putative pentatricopeptide repeat-containing protein At3g13770, mitoc... [more]
The following terms have been associated with this gene:
Vocabulary: Molecular Function
TermDefinition
GO:0005515protein binding
GO:0008270zinc ion binding
Vocabulary: INTERPRO
TermDefinition
IPR011990TPR-like_helical_dom_sf
IPR002885Pentatricopeptide_repeat
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0008150 biological_process
biological_process GO:0008152 metabolic process
cellular_component GO:0005575 cellular_component
molecular_function GO:0016787 hydrolase activity
molecular_function GO:0005515 protein binding
molecular_function GO:0008270 zinc ion binding
molecular_function GO:0008568 microtubule-severing ATPase activity
molecular_function GO:0003674 molecular_function

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Lsi06G000210.1Lsi06G000210.1mRNA


Analysis Name: InterPro Annotations of Lagenaria siceraria
Date Performed: 2017-09-18
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR002885Pentatricopeptide repeatPFAMPF01535PPRcoord: 543..565
score: 0.48coord: 195..220
score: 0.0041coord: 269..289
score: 0.0071coord: 167..193
score:
IPR002885Pentatricopeptide repeatPFAMPF13041PPR_2coord: 295..342
score: 9.4E-10coord: 91..137
score: 3.6E-10coord: 396..443
score: 5.0
IPR002885Pentatricopeptide repeatTIGRFAMsTIGR00756TIGR00756coord: 398..431
score: 4.6E-6coord: 297..331
score: 0.002coord: 94..127
score: 7.
IPR002885Pentatricopeptide repeatPROFILEPS51375PPRcoord: 229..263
score: 7.454coord: 396..430
score: 11.63coord: 295..329
score: 10.753coord: 59..89
score: 6.051coord: 92..126
score: 10.797coord: 467..497
score: 5.393coord: 499..529
score: 5.514coord: 264..294
score: 6.369coord: 365..395
score: 7.355coord: 162..192
score: 6.675coord: 431..466
score: 8.221coord: 193..227
score: 8.353coord: 330..364
score: 7.037coord: 533..567
score: 8
IPR011990Tetratricopeptide-like helical domainGENE3DG3DSA:1.25.40.10coord: 368..429
score: 1.6E-6coord: 497..559
score: 1.
NoneNo IPR availablePANTHERPTHR24015FAMILY NOT NAMEDcoord: 4..574
score:
NoneNo IPR availablePANTHERPTHR24015:SF539SUBFAMILY NOT NAMEDcoord: 4..574
score: