Lsi06G011320 (gene) Bottle gourd (USVL1VR-Ls)
The following sequences are available for this feature:
Legend: CDS Hold the cursor over a type above to highlight its positions in the sequence below.ATGGAGTTTAAACGCCGCCATGAACAACTACTCAACCTTGAGCTGCTTCTTGAACCATCTTCATCTTCTAATTTCTCAGCTCCTTTGAGTCCTCCAAATTGTGAGGCAGCTGCAACTGCTACTACTGCAAGGGTTTTCTCATGCAACTATTGCAAGAGGAAATTTTATAGCTCACAAGCGTTGGGAGGTCACCAAAATGCTCATAAATTGGAGAGAACTTTGGCAAAGAAGAGCAGAGAGATTAGAGGTTACAGAGGAGATTATGATGATCATCACAGTACAGCCAATAATATTATGATGATTAATAATAATTCAAGCCATTTGTGGAATAATAATGTTGAGATACCTATAATTACAACAACACCACCACCTGATCATCTACTCAGTGGTCCACGTGGCATTCCAGCTGATCATCATCATCATCATCATCAAGCTGATCATGATATTGGCCATCTTGACTTGTCTTTAAGGCTCTGA ATGGAGTTTAAACGCCGCCATGAACAACTACTCAACCTTGAGCTGCTTCTTGAACCATCTTCATCTTCTAATTTCTCAGCTCCTTTGAGTCCTCCAAATTGTGAGGCAGCTGCAACTGCTACTACTGCAAGGGTTTTCTCATGCAACTATTGCAAGAGGAAATTTTATAGCTCACAAGCGTTGGGAGGTCACCAAAATGCTCATAAATTGGAGAGAACTTTGGCAAAGAAGAGCAGAGAGATTAGAGGTTACAGAGGAGATTATGATGATCATCACAGTACAGCCAATAATATTATGATGATTAATAATAATTCAAGCCATTTGTGGAATAATAATGTTGAGATACCTATAATTACAACAACACCACCACCTGATCATCTACTCAGTGGTCCACGTGGCATTCCAGCTGATCATCATCATCATCATCATCAAGCTGATCATGATATTGGCCATCTTGACTTGTCTTTAAGGCTCTGA ATGGAGTTTAAACGCCGCCATGAACAACTACTCAACCTTGAGCTGCTTCTTGAACCATCTTCATCTTCTAATTTCTCAGCTCCTTTGAGTCCTCCAAATTGTGAGGCAGCTGCAACTGCTACTACTGCAAGGGTTTTCTCATGCAACTATTGCAAGAGGAAATTTTATAGCTCACAAGCGTTGGGAGGTCACCAAAATGCTCATAAATTGGAGAGAACTTTGGCAAAGAAGAGCAGAGAGATTAGAGGTTACAGAGGAGATTATGATGATCATCACAGTACAGCCAATAATATTATGATGATTAATAATAATTCAAGCCATTTGTGGAATAATAATGTTGAGATACCTATAATTACAACAACACCACCACCTGATCATCTACTCAGTGGTCCACGTGGCATTCCAGCTGATCATCATCATCATCATCATCAAGCTGATCATGATATTGGCCATCTTGACTTGTCTTTAAGGCTCTGA MEFKRRHEQLLNLELLLEPSSSSNFSAPLSPPNCEAAATATTARVFSCNYCKRKFYSSQALGGHQNAHKLERTLAKKSREIRGYRGDYDDHHSTANNIMMINNNSSHLWNNNVEIPIITTTPPPDHLLSGPRGIPADHHHHHHQADHDIGHLDLSLRL
BLAST of Lsi06G011320 vs. Swiss-Prot
Match: ZFP2_ARATH (Zinc finger protein 2 OS=Arabidopsis thaliana GN=ZFP2 PE=2 SV=1) HSP 1 Score: 90.9 bits (224), Expect = 1.4e-17 Identity = 48/71 (67.61%), Postives = 57/71 (80.28%), Query Frame = 1
BLAST of Lsi06G011320 vs. Swiss-Prot
Match: ZFP4_ARATH (Zinc finger protein 4 OS=Arabidopsis thaliana GN=ZFP4 PE=2 SV=2) HSP 1 Score: 72.4 bits (176), Expect = 5.0e-12 Identity = 46/99 (46.46%), Postives = 61/99 (61.62%), Query Frame = 1
BLAST of Lsi06G011320 vs. Swiss-Prot
Match: ZFP1_ARATH (Zinc finger protein 1 OS=Arabidopsis thaliana GN=ZFP1 PE=2 SV=1) HSP 1 Score: 69.7 bits (169), Expect = 3.2e-11 Identity = 31/36 (86.11%), Postives = 34/36 (94.44%), Query Frame = 1
BLAST of Lsi06G011320 vs. Swiss-Prot
Match: ZFP3_ARATH (Zinc finger protein 3 OS=Arabidopsis thaliana GN=ZFP3 PE=2 SV=1) HSP 1 Score: 69.3 bits (168), Expect = 4.2e-11 Identity = 48/136 (35.29%), Postives = 64/136 (47.06%), Query Frame = 1
BLAST of Lsi06G011320 vs. Swiss-Prot
Match: ZFP7_ARATH (Zinc finger protein 7 OS=Arabidopsis thaliana GN=ZFP7 PE=2 SV=1) HSP 1 Score: 66.2 bits (160), Expect = 3.6e-10 Identity = 44/124 (35.48%), Postives = 63/124 (50.81%), Query Frame = 1
BLAST of Lsi06G011320 vs. TrEMBL
Match: M1BM51_SOLTU (Uncharacterized protein OS=Solanum tuberosum GN=PGSC0003DMG400018743 PE=4 SV=1) HSP 1 Score: 99.8 bits (247), Expect = 3.2e-18 Identity = 69/152 (45.39%), Postives = 87/152 (57.24%), Query Frame = 1
BLAST of Lsi06G011320 vs. TrEMBL
Match: V7C9B9_PHAVU (Uncharacterized protein OS=Phaseolus vulgaris GN=PHAVU_003G147100g PE=4 SV=1) HSP 1 Score: 99.0 bits (245), Expect = 5.5e-18 Identity = 70/164 (42.68%), Postives = 88/164 (53.66%), Query Frame = 1
BLAST of Lsi06G011320 vs. TrEMBL
Match: K4CBF9_SOLLC (Uncharacterized protein OS=Solanum lycopersicum PE=4 SV=1) HSP 1 Score: 97.4 bits (241), Expect = 1.6e-17 Identity = 71/158 (44.94%), Postives = 87/158 (55.06%), Query Frame = 1
BLAST of Lsi06G011320 vs. TrEMBL
Match: A0A0S3R868_PHAAN (Uncharacterized protein OS=Vigna angularis var. angularis GN=Vigan.01G476700 PE=4 SV=1) HSP 1 Score: 94.4 bits (233), Expect = 1.4e-16 Identity = 69/164 (42.07%), Postives = 87/164 (53.05%), Query Frame = 1
BLAST of Lsi06G011320 vs. TrEMBL
Match: A0A0L9TF34_PHAAN (Uncharacterized protein OS=Phaseolus angularis GN=LR48_Vigan627s006500 PE=4 SV=1) HSP 1 Score: 94.4 bits (233), Expect = 1.4e-16 Identity = 69/164 (42.07%), Postives = 87/164 (53.05%), Query Frame = 1
BLAST of Lsi06G011320 vs. TAIR10
Match: AT5G57520.1 (AT5G57520.1 zinc finger protein 2) HSP 1 Score: 90.9 bits (224), Expect = 7.6e-19 Identity = 48/71 (67.61%), Postives = 57/71 (80.28%), Query Frame = 1
BLAST of Lsi06G011320 vs. TAIR10
Match: AT1G66140.1 (AT1G66140.1 zinc finger protein 4) HSP 1 Score: 72.4 bits (176), Expect = 2.8e-13 Identity = 46/99 (46.46%), Postives = 61/99 (61.62%), Query Frame = 1
BLAST of Lsi06G011320 vs. TAIR10
Match: AT1G80730.1 (AT1G80730.1 zinc-finger protein 1) HSP 1 Score: 69.7 bits (169), Expect = 1.8e-12 Identity = 31/36 (86.11%), Postives = 34/36 (94.44%), Query Frame = 1
BLAST of Lsi06G011320 vs. TAIR10
Match: AT5G25160.1 (AT5G25160.1 zinc finger protein 3) HSP 1 Score: 69.3 bits (168), Expect = 2.4e-12 Identity = 48/136 (35.29%), Postives = 64/136 (47.06%), Query Frame = 1
BLAST of Lsi06G011320 vs. TAIR10
Match: AT5G10970.1 (AT5G10970.1 C2H2 and C2HC zinc fingers superfamily protein) HSP 1 Score: 68.6 bits (166), Expect = 4.1e-12 Identity = 30/44 (68.18%), Postives = 38/44 (86.36%), Query Frame = 1
BLAST of Lsi06G011320 vs. NCBI nr
Match: gi|449457249|ref|XP_004146361.1| (PREDICTED: zinc finger protein 7 [Cucumis sativus]) HSP 1 Score: 167.2 bits (422), Expect = 2.4e-38 Identity = 110/173 (63.58%), Postives = 122/173 (70.52%), Query Frame = 1
BLAST of Lsi06G011320 vs. NCBI nr
Match: gi|593783475|ref|XP_007154778.1| (hypothetical protein PHAVU_003G147100g [Phaseolus vulgaris]) HSP 1 Score: 99.0 bits (245), Expect = 7.9e-18 Identity = 70/164 (42.68%), Postives = 88/164 (53.66%), Query Frame = 1
BLAST of Lsi06G011320 vs. NCBI nr
Match: gi|502151017|ref|XP_004508237.1| (PREDICTED: zinc finger protein 2 [Cicer arietinum]) HSP 1 Score: 98.6 bits (244), Expect = 1.0e-17 Identity = 69/153 (45.10%), Postives = 84/153 (54.90%), Query Frame = 1
BLAST of Lsi06G011320 vs. NCBI nr
Match: gi|951006527|ref|XP_014508495.1| (PREDICTED: zinc finger protein 2 [Vigna radiata var. radiata]) HSP 1 Score: 94.7 bits (234), Expect = 1.5e-16 Identity = 71/162 (43.83%), Postives = 86/162 (53.09%), Query Frame = 1
BLAST of Lsi06G011320 vs. NCBI nr
Match: gi|920682244|gb|KOM29016.1| (hypothetical protein LR48_Vigan627s006500 [Vigna angularis]) HSP 1 Score: 94.4 bits (233), Expect = 2.0e-16 Identity = 69/164 (42.07%), Postives = 87/164 (53.05%), Query Frame = 1
The following BLAST results are available for this feature:
The following terms have been associated with this gene:
GO Assignments
This gene is annotated with the following GO terms.
The following mRNA feature(s) are a part of this gene:
Analysis Name: InterPro Annotations of Lagenaria siceraria
Date Performed: 2017-09-18
The following gene(s) are orthologous to this gene:
The following gene(s) are paralogous to this gene: None The following block(s) are covering this gene:
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