CSPI01G20160 (gene) Wild cucumber (PI 183967)

Overview
NameCSPI01G20160
Typegene
OrganismCucumis sativus (Wild cucumber (PI 183967))
DescriptionZinc finger protein, putative
LocationChr1 : 15898269 .. 15898760 (-)
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGAGTTTAAACGCCGCCATCATCATCAACAGCAACAACTTAACCTTGAGCTTCTTCTTGAACCTTCTTCTTCTTCTTCTAACTCTTCTTCATCTGCTCCTATTAGTCCAAATTTTGAGGCAGTTGTTGGTGCTAGAGTTTTCTCATGCAATTATTGCAAGAGGAAATTTTATAGCTCTCAAGCTTTGGGAGGTCACCAAAATGCTCATAAACTGGAGAGAACTTTGGCCAAGAAAAGCAGAGAAATTAGAGGTTACAGATCAGGAGATGATCATCATGAACATCATCATAATAGTAATAATAATAGTATGATGATGATGATGAATAATTATTCAAGCCATAATTTATGGAATGTTGAGACAATTACATCATCAACAACAGCAACAACAATAGCTGATGATCATCATCAATTACTCAATGGAAGACGTGGTATTATTCCAGCTGATGATGATCATGATATTGGCCATCTTGATTTGTCTTTAAGGCTCTGA

mRNA sequence

ATGGAGTTTAAACGCCGCCATCATCATCAACAGCAACAACTTAACCTTGAGCTTCTTCTTGAACCTTCTTCTTCTTCTTCTAACTCTTCTTCATCTGCTCCTATTAGTCCAAATTTTGAGGCAGTTGTTGGTGCTAGAGTTTTCTCATGCAATTATTGCAAGAGGAAATTTTATAGCTCTCAAGCTTTGGGAGGTCACCAAAATGCTCATAAACTGGAGAGAACTTTGGCCAAGAAAAGCAGAGAAATTAGAGGTTACAGATCAGGAGATGATCATCATGAACATCATCATAATAGTAATAATAATAGTATGATGATGATGATGAATAATTATTCAAGCCATAATTTATGGAATGTTGAGACAATTACATCATCAACAACAGCAACAACAATAGCTGATGATCATCATCAATTACTCAATGGAAGACGTGGTATTATTCCAGCTGATGATGATCATGATATTGGCCATCTTGATTTGTCTTTAAGGCTCTGA

Coding sequence (CDS)

ATGGAGTTTAAACGCCGCCATCATCATCAACAGCAACAACTTAACCTTGAGCTTCTTCTTGAACCTTCTTCTTCTTCTTCTAACTCTTCTTCATCTGCTCCTATTAGTCCAAATTTTGAGGCAGTTGTTGGTGCTAGAGTTTTCTCATGCAATTATTGCAAGAGGAAATTTTATAGCTCTCAAGCTTTGGGAGGTCACCAAAATGCTCATAAACTGGAGAGAACTTTGGCCAAGAAAAGCAGAGAAATTAGAGGTTACAGATCAGGAGATGATCATCATGAACATCATCATAATAGTAATAATAATAGTATGATGATGATGATGAATAATTATTCAAGCCATAATTTATGGAATGTTGAGACAATTACATCATCAACAACAGCAACAACAATAGCTGATGATCATCATCAATTACTCAATGGAAGACGTGGTATTATTCCAGCTGATGATGATCATGATATTGGCCATCTTGATTTGTCTTTAAGGCTCTGA
Homology
[Close]
BLAST of CSPI01G20160 vs. Swiss-Prot
Match: ZFP2_ARATH (Zinc finger protein 2 OS=Arabidopsis thaliana GN=ZFP2 PE=2 SV=1)

HSP 1 Score: 99.4 bits (246), Expect = 4.0e-20
Identity = 55/75 (73.33%), Postives = 61/75 (81.33%), Query Frame = 1 

Query: 9  HQQQQLNLELLLEPSSSSSNSSSSAPISPNFEAVVGARVFSCNYCKRKFYSSQALGGHQN 68
          ++  QLNLEL+LEPSS SS+SSSS   S   E     RVFSCNYC+RKFYSSQALGGHQN
Sbjct: 16 YKNHQLNLELVLEPSSMSSSSSSSTNSSSCLEQ---PRVFSCNYCQRKFYSSQALGGHQN 75

Query: 69 AHKLERTLAKKSREI 84
          AHKLERTLAKKSRE+
Sbjct: 76 AHKLERTLAKKSREL 87

[Close]
BLAST of CSPI01G20160 vs. Swiss-Prot
Match: ZFP4_ARATH (Zinc finger protein 4 OS=Arabidopsis thaliana GN=ZFP4 PE=2 SV=2)

HSP 1 Score: 73.6 bits (179), Expect = 2.3e-12
Identity = 40/66 (60.61%), Postives = 46/66 (69.70%), Query Frame = 1 

Query: 15  NLELLLEPSSSSSNSSSSAPISPNFEAVVGARVFSCNYCKRKFYSSQALGGHQNAHKLER 74
           +L L L  +S SSN        P+    V  RVFSCNYC+RKFYSSQALGGHQNAHK ER
Sbjct: 56  SLTLPLSSTSESSNPEQQQQQQPS----VSKRVFSCNYCQRKFYSSQALGGHQNAHKRER 115

Query: 75  TLAKKS 81
           TLAK++
Sbjct: 116 TLAKRA 117

[Close]
BLAST of CSPI01G20160 vs. Swiss-Prot
Match: ZFP1_ARATH (Zinc finger protein 1 OS=Arabidopsis thaliana GN=ZFP1 PE=2 SV=1)

HSP 1 Score: 73.2 bits (178), Expect = 3.0e-12
Identity = 43/87 (49.43%), Postives = 56/87 (64.37%), Query Frame = 1 

Query: 5   RRHHHQQQQLNLELLLEPSSSSS----------NSSSSAPISPNFEAVVGARVFSCNYCK 64
           ++  HQ  +L L LL   +++SS          +SSS++      E +   RVFSCNYC+
Sbjct: 15  KKQGHQDLELGLTLLSRGTATSSELNLIDSFKTSSSSTSHHQHQQEQLADPRVFSCNYCQ 74

Query: 65  RKFYSSQALGGHQNAHKLERTLAKKSR 82
           RKFYSSQALGGHQNAHK ERTLAK+ +
Sbjct: 75  RKFYSSQALGGHQNAHKRERTLAKRGQ 101

[Close]
BLAST of CSPI01G20160 vs. Swiss-Prot
Match: ZFP7_ARATH (Zinc finger protein 7 OS=Arabidopsis thaliana GN=ZFP7 PE=2 SV=1)

HSP 1 Score: 65.9 bits (159), Expect = 4.8e-10
Identity = 53/149 (35.57%), Postives = 77/149 (51.68%), Query Frame = 1 

Query: 10  QQQQLNLELLLEPSSSSSNSSSSAPISPNFEAVVGARVFSCNYCKRKFYSSQALGGHQNA 69
           +   ++L+L L  + +    S+    +P        RVFSCNYC+RKFYSSQALGGHQNA
Sbjct: 29  ESNHVSLDLKLNDTFNDDTKSTKCEANP--------RVFSCNYCRRKFYSSQALGGHQNA 88

Query: 70  HKLERTLAKKSREIRGYRSGDDHHEHHHNSNNNSMMMMMNNYSSHNLWNVETITSSTTAT 129
           HK ERT+AK++  + G   G  HH   +   ++S+ M  ++   H+       T S    
Sbjct: 89  HKRERTMAKRAMHM-GRMFG--HHHRPYTYTSSSLGMQAHSGLLHH-------TLSQPQP 148

Query: 130 TIADDHHQLLNGRRGIIPADDDHDIGHLD 159
            ++  HHQ   G    +P   D+D G  D
Sbjct: 149 LVSRFHHQGYFG--NTVPLFFDYDDGGSD 157

[Close]
BLAST of CSPI01G20160 vs. Swiss-Prot
Match: ZFP3_ARATH (Zinc finger protein 3 OS=Arabidopsis thaliana GN=ZFP3 PE=2 SV=1)

HSP 1 Score: 59.7 bits (143), Expect = 3.5e-08
Identity = 44/119 (36.97%), Postives = 64/119 (53.78%), Query Frame = 1 

Query: 4   KRRHHHQQQQLNLELLLEPSSSSSNSSSSAPISPNFEAVVGARVFSCNYCKRKFYSSQAL 63
           +R  H+   +LNL   ++ ++S  N S+++            ++FSCNYC+R FYSSQAL
Sbjct: 26  ERDVHNSSHELNLIDCIDDTTSIVNESTTS---------TEQKLFSCNYCQRTFYSSQAL 85

Query: 64  GGHQNAHKLERTLAKKSREIRGYRSGDDHH------EHHHNSNNNSMMMMMNNYSSHNL 117
           GGHQNAHK ERTLAK+ + +    S   H         H   NN+  + +  +  SH L
Sbjct: 86  GGHQNAHKRERTLAKRGQRMAASASAFGHPYGFSPLPFHGQYNNHRSLGIQAHSISHKL 135

[Close]
BLAST of CSPI01G20160 vs. TrEMBL
Match: M1BM51_SOLTU (Uncharacterized protein OS=Solanum tuberosum GN=PGSC0003DMG400018743 PE=4 SV=1)

HSP 1 Score: 100.5 bits (249), Expect = 2.0e-18
Identity = 70/154 (45.45%), Postives = 90/154 (58.44%), Query Frame = 1 

Query: 17  ELLLEPSSSSSNSSSSAPISPNFEAVVGARVFSCNYCKRKFYSSQALGGHQNAHKLERTL 76
           +LLL+ SSSSS+SS  +P+ P        RVFSCNYC+RKFYSSQALGGHQNAHKLERTL
Sbjct: 17  DLLLDQSSSSSSSSPLSPVEP--------RVFSCNYCRRKFYSSQALGGHQNAHKLERTL 76

Query: 77  AKKSREIRGYRSGDDHHEHHHNSNNN--SMMMMMNNYSSHN-----LWNVETITSSTTAT 136
           AKKSRE+     G      +HN NNN  S+     +++ H      + N + I+      
Sbjct: 77  AKKSRELSSTLRGTHSSWSNHNINNNYRSLSPSGPSHTGHGHGARFVTNNDIISYGRREM 136

Query: 137 TIADDHHQLLNGRRGIIPADDDHDIGHLDLSLRL 164
            ++  +  + NG   +       D GHLDLSLRL
Sbjct: 137 MMS--YESMKNGHESV-----QEDFGHLDLSLRL 155

[Close]
BLAST of CSPI01G20160 vs. TrEMBL
Match: Q29Q69_ARATH (At5g57520 OS=Arabidopsis thaliana GN=At5g57520 PE=2 SV=1)

HSP 1 Score: 99.4 bits (246), Expect = 4.4e-18
Identity = 55/75 (73.33%), Postives = 61/75 (81.33%), Query Frame = 1 

Query: 9  HQQQQLNLELLLEPSSSSSNSSSSAPISPNFEAVVGARVFSCNYCKRKFYSSQALGGHQN 68
          ++  QLNLEL+LEPSS SS+SSSS   S   E     RVFSCNYC+RKFYSSQALGGHQN
Sbjct: 16 YKNHQLNLELVLEPSSMSSSSSSSTNSSSCLEQ---PRVFSCNYCQRKFYSSQALGGHQN 75

Query: 69 AHKLERTLAKKSREI 84
          AHKLERTLAKKSRE+
Sbjct: 76 AHKLERTLAKKSREL 87

[Close]
BLAST of CSPI01G20160 vs. TrEMBL
Match: A0A078FFX0_BRANA (BnaC03g12900D protein OS=Brassica napus GN=BnaC03g12900D PE=4 SV=1)

HSP 1 Score: 98.2 bits (243), Expect = 9.8e-18
Identity = 54/75 (72.00%), Postives = 61/75 (81.33%), Query Frame = 1 

Query: 9  HQQQQLNLELLLEPSSSSSNSSSSAPISPNFEAVVGARVFSCNYCKRKFYSSQALGGHQN 68
          ++  QLNLEL+L+PSS SS+SSSS   S   E     RVFSCNYC+RKFYSSQALGGHQN
Sbjct: 16 YKNHQLNLELVLDPSSMSSSSSSSTNSSSCLEQ---PRVFSCNYCQRKFYSSQALGGHQN 75

Query: 69 AHKLERTLAKKSREI 84
          AHKLERTLAKKSRE+
Sbjct: 76 AHKLERTLAKKSREL 87

[Close]
BLAST of CSPI01G20160 vs. TrEMBL
Match: M4CRH4_BRARP (Uncharacterized protein OS=Brassica rapa subsp. pekinensis PE=4 SV=1)

HSP 1 Score: 98.2 bits (243), Expect = 9.8e-18
Identity = 54/75 (72.00%), Postives = 61/75 (81.33%), Query Frame = 1 

Query: 9  HQQQQLNLELLLEPSSSSSNSSSSAPISPNFEAVVGARVFSCNYCKRKFYSSQALGGHQN 68
          ++  QLNLEL+L+PSS SS+SSSS   S   E     RVFSCNYC+RKFYSSQALGGHQN
Sbjct: 16 YKNHQLNLELVLDPSSMSSSSSSSTNSSSCLEQ---PRVFSCNYCQRKFYSSQALGGHQN 75

Query: 69 AHKLERTLAKKSREI 84
          AHKLERTLAKKSRE+
Sbjct: 76 AHKLERTLAKKSREL 87

[Close]
BLAST of CSPI01G20160 vs. TrEMBL
Match: A0A0D3B2Z7_BRAOL (Uncharacterized protein OS=Brassica oleracea var. oleracea PE=4 SV=1)

HSP 1 Score: 98.2 bits (243), Expect = 9.8e-18
Identity = 54/75 (72.00%), Postives = 61/75 (81.33%), Query Frame = 1 

Query: 9  HQQQQLNLELLLEPSSSSSNSSSSAPISPNFEAVVGARVFSCNYCKRKFYSSQALGGHQN 68
          ++  QLNLEL+L+PSS SS+SSSS   S   E     RVFSCNYC+RKFYSSQALGGHQN
Sbjct: 16 YKNHQLNLELVLDPSSMSSSSSSSTNSSSCLEQ---PRVFSCNYCQRKFYSSQALGGHQN 75

Query: 69 AHKLERTLAKKSREI 84
          AHKLERTLAKKSRE+
Sbjct: 76 AHKLERTLAKKSREL 87

[Close]
BLAST of CSPI01G20160 vs. TAIR10
Match: AT5G57520.1 (AT5G57520.1 zinc finger protein 2)

HSP 1 Score: 99.4 bits (246), Expect = 2.2e-21
Identity = 55/75 (73.33%), Postives = 61/75 (81.33%), Query Frame = 1 

Query: 9  HQQQQLNLELLLEPSSSSSNSSSSAPISPNFEAVVGARVFSCNYCKRKFYSSQALGGHQN 68
          ++  QLNLEL+LEPSS SS+SSSS   S   E     RVFSCNYC+RKFYSSQALGGHQN
Sbjct: 16 YKNHQLNLELVLEPSSMSSSSSSSTNSSSCLEQ---PRVFSCNYCQRKFYSSQALGGHQN 75

Query: 69 AHKLERTLAKKSREI 84
          AHKLERTLAKKSRE+
Sbjct: 76 AHKLERTLAKKSREL 87

[Close]
BLAST of CSPI01G20160 vs. TAIR10
Match: AT1G66140.1 (AT1G66140.1 zinc finger protein 4)

HSP 1 Score: 73.6 bits (179), Expect = 1.3e-13
Identity = 40/66 (60.61%), Postives = 46/66 (69.70%), Query Frame = 1 

Query: 15  NLELLLEPSSSSSNSSSSAPISPNFEAVVGARVFSCNYCKRKFYSSQALGGHQNAHKLER 74
           +L L L  +S SSN        P+    V  RVFSCNYC+RKFYSSQALGGHQNAHK ER
Sbjct: 56  SLTLPLSSTSESSNPEQQQQQQPS----VSKRVFSCNYCQRKFYSSQALGGHQNAHKRER 115

Query: 75  TLAKKS 81
           TLAK++
Sbjct: 116 TLAKRA 117

[Close]
BLAST of CSPI01G20160 vs. TAIR10
Match: AT1G80730.1 (AT1G80730.1 zinc-finger protein 1)

HSP 1 Score: 73.2 bits (178), Expect = 1.7e-13
Identity = 43/87 (49.43%), Postives = 56/87 (64.37%), Query Frame = 1 

Query: 5   RRHHHQQQQLNLELLLEPSSSSS----------NSSSSAPISPNFEAVVGARVFSCNYCK 64
           ++  HQ  +L L LL   +++SS          +SSS++      E +   RVFSCNYC+
Sbjct: 15  KKQGHQDLELGLTLLSRGTATSSELNLIDSFKTSSSSTSHHQHQQEQLADPRVFSCNYCQ 74

Query: 65  RKFYSSQALGGHQNAHKLERTLAKKSR 82
           RKFYSSQALGGHQNAHK ERTLAK+ +
Sbjct: 75  RKFYSSQALGGHQNAHKRERTLAKRGQ 101

[Close]
BLAST of CSPI01G20160 vs. TAIR10
Match: AT1G24625.1 (AT1G24625.1 zinc finger protein 7)

HSP 1 Score: 65.9 bits (159), Expect = 2.7e-11
Identity = 53/149 (35.57%), Postives = 77/149 (51.68%), Query Frame = 1 

Query: 10  QQQQLNLELLLEPSSSSSNSSSSAPISPNFEAVVGARVFSCNYCKRKFYSSQALGGHQNA 69
           +   ++L+L L  + +    S+    +P        RVFSCNYC+RKFYSSQALGGHQNA
Sbjct: 29  ESNHVSLDLKLNDTFNDDTKSTKCEANP--------RVFSCNYCRRKFYSSQALGGHQNA 88

Query: 70  HKLERTLAKKSREIRGYRSGDDHHEHHHNSNNNSMMMMMNNYSSHNLWNVETITSSTTAT 129
           HK ERT+AK++  + G   G  HH   +   ++S+ M  ++   H+       T S    
Sbjct: 89  HKRERTMAKRAMHM-GRMFG--HHHRPYTYTSSSLGMQAHSGLLHH-------TLSQPQP 148

Query: 130 TIADDHHQLLNGRRGIIPADDDHDIGHLD 159
            ++  HHQ   G    +P   D+D G  D
Sbjct: 149 LVSRFHHQGYFG--NTVPLFFDYDDGGSD 157

[Close]
BLAST of CSPI01G20160 vs. TAIR10
Match: AT5G01860.1 (AT5G01860.1 C2H2 and C2HC zinc fingers superfamily protein)

HSP 1 Score: 60.8 bits (146), Expect = 8.8e-10
Identity = 33/73 (45.21%), Postives = 45/73 (61.64%), Query Frame = 1 

Query: 11  QQQLNLELLLEPSSSSSNSSSSAPISPNFEAVVGARVFSCNYCKRKFYSSQALGGHQNAH 70
           QQ+L    L   SS+ + +               ARVF+C +CK++F +SQALGGHQNAH
Sbjct: 44  QQRLEFRFLFNESSTRNEAK--------------ARVFACTFCKKEFSTSQALGGHQNAH 102

Query: 71  KLERTLAKKSREI 84
           K ER+LAK+ +EI
Sbjct: 104 KQERSLAKRRKEI 102

[Close]
BLAST of CSPI01G20160 vs. NCBI nr
Match: gi|449457249|ref|XP_004146361.1| (PREDICTED: zinc finger protein 7 [Cucumis sativus])

HSP 1 Score: 321.6 bits (823), Expect = 7.8e-85
Identity = 162/163 (99.39%), Postives = 163/163 (100.00%), Query Frame = 1 

Query: 1   MEFKRRHHHQQQQLNLELLLEPSSSSSNSSSSAPISPNFEAVVGARVFSCNYCKRKFYSS 60
           MEFKRRHHHQQQQLNLELLLEPSSSSSNSSSSAPISPNFEAVVGARVFSCNYCKRKFYSS
Sbjct: 1   MEFKRRHHHQQQQLNLELLLEPSSSSSNSSSSAPISPNFEAVVGARVFSCNYCKRKFYSS 60

Query: 61  QALGGHQNAHKLERTLAKKSREIRGYRSGDDHHEHHHNSNNNSMMMMMNNYSSHNLWNVE 120
           QALGGHQNAHKLERTLAKKSRE+RGYRSGDDHHEHHHNSNNNSMMMMMNNYSSHNLWNVE
Sbjct: 61  QALGGHQNAHKLERTLAKKSRELRGYRSGDDHHEHHHNSNNNSMMMMMNNYSSHNLWNVE 120

Query: 121 TITSSTTATTIADDHHQLLNGRRGIIPADDDHDIGHLDLSLRL 164
           TITSSTTATTIADDHHQLLNGRRGIIPADDDHDIGHLDLSLRL
Sbjct: 121 TITSSTTATTIADDHHQLLNGRRGIIPADDDHDIGHLDLSLRL 163

[Close]
BLAST of CSPI01G20160 vs. NCBI nr
Match: gi|15242152|ref|NP_200560.1| (zinc finger protein 2 [Arabidopsis thaliana])

HSP 1 Score: 99.4 bits (246), Expect = 6.3e-18
Identity = 55/75 (73.33%), Postives = 61/75 (81.33%), Query Frame = 1 

Query: 9  HQQQQLNLELLLEPSSSSSNSSSSAPISPNFEAVVGARVFSCNYCKRKFYSSQALGGHQN 68
          ++  QLNLEL+LEPSS SS+SSSS   S   E     RVFSCNYC+RKFYSSQALGGHQN
Sbjct: 16 YKNHQLNLELVLEPSSMSSSSSSSTNSSSCLEQ---PRVFSCNYCQRKFYSSQALGGHQN 75

Query: 69 AHKLERTLAKKSREI 84
          AHKLERTLAKKSRE+
Sbjct: 76 AHKLERTLAKKSREL 87

[Close]
BLAST of CSPI01G20160 vs. NCBI nr
Match: gi|1012002521|ref|XP_015935167.1| (PREDICTED: zinc finger protein 2 [Arachis duranensis])

HSP 1 Score: 99.4 bits (246), Expect = 6.3e-18
Identity = 61/110 (55.45%), Postives = 73/110 (66.36%), Query Frame = 1 

Query: 1   MEFKRRHHHQ-----QQQLNLELLLEPSSSSSNSSS--SAPISPNFEAVVGARVFSCNYC 60
           +     HHH      +  +NL+LLLEPSSSS++SSS  S     N+  +  ARVFSCNYC
Sbjct: 10  LHLSHHHHHHLPTADENSINLDLLLEPSSSSTSSSSPLSGGAGNNYNNMTEARVFSCNYC 69

Query: 61  KRKFYSSQALGGHQNAHKLERTLAKKSREIRGYRSGDDHHEHHHNSNNNS 104
           +RKFYSSQALGGHQNAHKLERTLAKK+REI    S  DH  +  NS   +
Sbjct: 70  QRKFYSSQALGGHQNAHKLERTLAKKTREITS--SMQDHRSNFINSTTTT 117

[Close]
BLAST of CSPI01G20160 vs. NCBI nr
Match: gi|922446733|ref|XP_013627204.1| (PREDICTED: zinc finger protein 2 [Brassica oleracea var. oleracea])

HSP 1 Score: 98.2 bits (243), Expect = 1.4e-17
Identity = 54/75 (72.00%), Postives = 61/75 (81.33%), Query Frame = 1 

Query: 9   HQQQQLNLELLLEPSSSSSNSSSSAPISPNFEAVVGARVFSCNYCKRKFYSSQALGGHQN 68
           ++  QLNLEL+L+PSS SS+SSSS   S   E     RVFSCNYC+RKFYSSQALGGHQN
Sbjct: 61  YKNHQLNLELVLDPSSMSSSSSSSTNSSSCLEQ---PRVFSCNYCQRKFYSSQALGGHQN 120

Query: 69  AHKLERTLAKKSREI 84
           AHKLERTLAKKSRE+
Sbjct: 121 AHKLERTLAKKSREL 132

[Close]
BLAST of CSPI01G20160 vs. NCBI nr
Match: gi|674921259|emb|CDY11864.1| (BnaC03g12900D [Brassica napus])

HSP 1 Score: 98.2 bits (243), Expect = 1.4e-17
Identity = 54/75 (72.00%), Postives = 61/75 (81.33%), Query Frame = 1 

Query: 9  HQQQQLNLELLLEPSSSSSNSSSSAPISPNFEAVVGARVFSCNYCKRKFYSSQALGGHQN 68
          ++  QLNLEL+L+PSS SS+SSSS   S   E     RVFSCNYC+RKFYSSQALGGHQN
Sbjct: 16 YKNHQLNLELVLDPSSMSSSSSSSTNSSSCLEQ---PRVFSCNYCQRKFYSSQALGGHQN 75

Query: 69 AHKLERTLAKKSREI 84
          AHKLERTLAKKSRE+
Sbjct: 76 AHKLERTLAKKSREL 87

The following BLAST results are available for this feature:
BLAST of CSPI01G20160 vs. Swiss-Prot
Match NameE-valueIdentityDescription
ZFP2_ARATH4.0e-2073.33Zinc finger protein 2 OS=Arabidopsis thaliana GN=ZFP2 PE=2 SV=1[more]
ZFP4_ARATH2.3e-1260.61Zinc finger protein 4 OS=Arabidopsis thaliana GN=ZFP4 PE=2 SV=2[more]
ZFP1_ARATH3.0e-1249.43Zinc finger protein 1 OS=Arabidopsis thaliana GN=ZFP1 PE=2 SV=1[more]
ZFP7_ARATH4.8e-1035.57Zinc finger protein 7 OS=Arabidopsis thaliana GN=ZFP7 PE=2 SV=1[more]
ZFP3_ARATH3.5e-0836.97Zinc finger protein 3 OS=Arabidopsis thaliana GN=ZFP3 PE=2 SV=1[more]
BLAST of CSPI01G20160 vs. TrEMBL
Match NameE-valueIdentityDescription
M1BM51_SOLTU2.0e-1845.45Uncharacterized protein OS=Solanum tuberosum GN=PGSC0003DMG400018743 PE=4 SV=1[more]
Q29Q69_ARATH4.4e-1873.33At5g57520 OS=Arabidopsis thaliana GN=At5g57520 PE=2 SV=1[more]
A0A078FFX0_BRANA9.8e-1872.00BnaC03g12900D protein OS=Brassica napus GN=BnaC03g12900D PE=4 SV=1[more]
M4CRH4_BRARP9.8e-1872.00Uncharacterized protein OS=Brassica rapa subsp. pekinensis PE=4 SV=1[more]
A0A0D3B2Z7_BRAOL9.8e-1872.00Uncharacterized protein OS=Brassica oleracea var. oleracea PE=4 SV=1[more]
BLAST of CSPI01G20160 vs. TAIR10
Match NameE-valueIdentityDescription
AT5G57520.12.2e-2173.33 zinc finger protein 2[more]
AT1G66140.11.3e-1360.61 zinc finger protein 4[more]
AT1G80730.11.7e-1349.43 zinc-finger protein 1[more]
AT1G24625.12.7e-1135.57 zinc finger protein 7[more]
AT5G01860.18.8e-1045.21 C2H2 and C2HC zinc fingers superfamily protein[more]
BLAST of CSPI01G20160 vs. NCBI nr
Match NameE-valueIdentityDescription
gi|449457249|ref|XP_004146361.1|7.8e-8599.39PREDICTED: zinc finger protein 7 [Cucumis sativus][more]
gi|15242152|ref|NP_200560.1|6.3e-1873.33zinc finger protein 2 [Arabidopsis thaliana][more]
gi|1012002521|ref|XP_015935167.1|6.3e-1855.45PREDICTED: zinc finger protein 2 [Arachis duranensis][more]
gi|922446733|ref|XP_013627204.1|1.4e-1772.00PREDICTED: zinc finger protein 2 [Brassica oleracea var. oleracea][more]
gi|674921259|emb|CDY11864.1|1.4e-1772.00BnaC03g12900D [Brassica napus][more]
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: INTERPRO
TermDefinition
IPR007087Zinc finger, C2H2
Vocabulary: Molecular Function
TermDefinition
GO:0046872metal ion binding
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0006355 regulation of transcription, DNA-templated
biological_process GO:0008150 biological_process
biological_process GO:0060862 negative regulation of floral organ abscission
cellular_component GO:0005667 transcription factor complex
cellular_component GO:0005575 cellular_component
cellular_component GO:0005634 nucleus
molecular_function GO:0046872 metal ion binding
molecular_function GO:0003700 transcription factor activity, sequence-specific DNA binding
molecular_function GO:0003676 nucleic acid binding
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
CSPI01G20160.1CSPI01G20160.1mRNA


InterPro
Analysis Name: InterPro Annotations of cucumber (PI183967)
Date Performed: 2017-01-17
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR007087Zinc finger, C2H2PROSITEPS00028ZINC_FINGER_C2H2_1coord: 50..70
scor
IPR007087Zinc finger, C2H2PROFILEPS50157ZINC_FINGER_C2H2_2coord: 48..75
score: 11
NoneNo IPR availableunknownSSF57667beta-beta-alpha zinc fingerscoord: 44..75
score: 1.

Synteny
The following gene(s) are orthologous to this gene:
GeneOrthologueOrganismBlock
CSPI01G20160MELO3C017474Melon (DHL92) v3.5.1cpimeB043
CSPI01G20160ClCG06G013220Watermelon (Charleston Gray)cpiwcgB072
CSPI01G20160Lsi06G011320Bottle gourd (USVL1VR-Ls)cpilsiB065
CSPI01G20160MELO3C017474.2Melon (DHL92) v3.6.1cpimedB037
CSPI01G20160Cla97C06G122660Watermelon (97103) v2cpiwmbB069
CSPI01G20160Cucsa.092400Cucumber (Gy14) v1cgycpiB098
CSPI01G20160CmaCh10G004020Cucurbita maxima (Rimu)cmacpiB060
CSPI01G20160CmaCh11G004010Cucurbita maxima (Rimu)cmacpiB099
CSPI01G20160CmoCh11G003960Cucurbita moschata (Rifu)cmocpiB091
CSPI01G20160CmoCh10G004330Cucurbita moschata (Rifu)cmocpiB052
CSPI01G20160Cp4.1LG18g06240Cucurbita pepo (Zucchini)cpecpiB352
CSPI01G20160CsGy1G019990Cucumber (Gy14) v2cgybcpiB002
CSPI01G20160Carg09019Silver-seed gourdcarcpiB0625
CSPI01G20160Carg15248Silver-seed gourdcarcpiB0822
The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:
GeneOrganismBlock
CSPI01G20160Cucumber (Gy14) v1cgycpiB094
CSPI01G20160Cucurbita moschata (Rifu)cmocpiB779
CSPI01G20160Cucumber (Chinese Long) v2cpicuB001
CSPI01G20160Cucumber (Chinese Long) v2cpicuB022
CSPI01G20160Watermelon (97103) v1cpiwmB081
CSPI01G20160Watermelon (97103) v1cpiwmB087
CSPI01G20160Cucurbita pepo (Zucchini)cpecpiB641
CSPI01G20160Bottle gourd (USVL1VR-Ls)cpilsiB008
CSPI01G20160Bottle gourd (USVL1VR-Ls)cpilsiB015
CSPI01G20160Cucumber (Gy14) v2cgybcpiB049
CSPI01G20160Cucumber (Chinese Long) v3cpicucB000
CSPI01G20160Cucumber (Chinese Long) v3cpicucB026
CSPI01G20160Watermelon (97103) v2cpiwmbB022
CSPI01G20160Wax gourdcpiwgoB004
CSPI01G20160Wax gourdcpiwgoB101
CSPI01G20160Wild cucumber (PI 183967)cpicpiB012