Lsi08G009230 (gene) Bottle gourd (USVL1VR-Ls)
The following sequences are available for this feature:
Legend: CDS Hold the cursor over a type above to highlight its positions in the sequence below.ATGGCTCTTTTACAACCCCAAAAAACCCTTCAAATCACCTCCAATCTCTTCCCCATCTGTAATTTTAGCTCCTTTCGACCTTCCATTTCAATTCCTTTCTCATCCTCAAAAACCCATCATCAAAATGCGCTTCTTTCCTCTTCCAGCAGCAGAACCTTTTCACTCTCAACCACTCCAAGAAGGATTTTGTGCGAACCCCCTAAAGGAAAGTACATCCACGACGATTATCTTGTGGTACACTTACGTTTTCTTCTACCCCTTTTGCTTATTTTTTTTTGATTTTTGTCTATGAGTTTGTTATTGTTTTTGCTTGTCAATTGTTTTGGTGTGGGGTTTGCTTGCAGAAGAAGATGACATCTGCCGAAGTGCAGGAGTTGGTGAAGGGGGAAAGAAATGTGCCGCTTATAATTGATTTTTATGCAACATGGTGTGGACCCTGCATTCTAATGGCTCAAGAACTTGAAATGGTATGTCTAATTACATTGAATTTTGGTATGAATTCACATGTAAATGGTGATTCTTTGCCAGAGAGGTGTGTAAATGCTTCATTTTTATGTATGTATGGATCTATTAGCTTAAGGTTTTGGATTTAGTGGGGGTTAAAAATTATATCAGTATATCAGTAGCTCTTGAGTTCAAACTTTTACTCTATCATTTTCTCTTCTATTGATATTGATAATCATTGTTGAGTCTTGTGCCCATTAAACCTATAAGTTAGAGGGAGCTATATATGTATTTGTATAAGAGATCAAAGATACCGACTCATCTGGCTTTTGCTTTTGGGGTTAGTGTTAGTGGTAGAATTAATGTATGAATCTCATTTAATTGTAATTTCAAACTCAAAGCCTTATCTAGTATAGTTCACATTTCTCCTTTTAGTTTTGACGGGGATGTGCTTCCATATGGTTCTGGTGAAGAAGAAAATTTACATGATGTGTTGAGGCCAAAAGGCATTGATTAAGAACTTCAAGTTTTATATATATCTATATGAAAACTACCGCAGTTAGTTTGGCTTATTGTAGTATTCTTGTGATTTGGGCTATTCATTTACTTGGTTCTGTAACATAGTGGTTGGTGTCTTATGGTGGTCTGGCCATTGTATCTTTTGGTAGTATATTTACTCCCATCCTGCTGTCTTACAGTCTGTTGAGAGGGAAATTCCTTGTTCATACAATTAGTTGATCTTCGTTCCTGCTAATTCTCACAGGTGGAGAGTTAGTTTCTATTTGGAATAATTGGGGTAGTTGATTATTAAGCCTGCTTGTTGCAGAATCAAATCATTGTCTGTAGTCTTAATTTGTCACAAAAACTTGTGGTTTTAGTAGATGTGAGTGTTAAGCGATATTTACGTGCTTGTAATCACAAAGAAGGCTTGCCTTTTTCTGTGTGCATGTTTGTACTTTTCTTTGATCAAGACACTGTGAGATGACAAAGGAACTGAGAGGTCAATGCTGCATCTTGGTTGCATATGCATTTCATGCCCTGTAACATACTTGGATTGGCGATAAGATTGTAGTTCTTAACTTGCTTCAGCAAAGTTGGAATCGATTGGATAATTCTTTTGCATCTTTTTGTTTATTTATTTATTTGTAGTCACTGGATAAAAGTTGTGGTTTGCTCAAGCAAAATTCTTTATGGACCCACCAATCGTGAATACCAACCATGGGAAGGGTAAGAAGGGGATTTTTCAAAGGACAGTCAGTTAGCAGGACATCTTTGTAAGGAATGTGGGGAATAGGACAGTGTTACCAGTGAAAGCAATGTTTTGGGAGGGGATCATTGTTATTTTGGGAATTGTGATGTTATGGAGAGAGGTTACTAGCCCTCTCGAAAATTAGCTGGATATTTTATTGTGTTCTCAGCATATACTTTCCGTTGTCTCGTTGGTGATACTGTTCTAACGCTAGCATTGGAATATGTTTTGAACTTTAAGTGATTGTTCAGAATGTTTGTTATATCTTTTGCTCCAACTAAAGGAACACTACAATTTTCTGGGTTGTTCAGAAACATTACGATGATCTTTTAGACGTCATGTTGGTTCTATTTTGCTCTTTCAGGATTGCAATTACACCTTCTTCCAGTTTTAGTTCAGGTAGTTGATATTGTTATTGAAATGGCAATGAATATAAAGCTGCACTATTTCCTTGTGCTACTATTGTTTGCACGGTTGCGTTCGAGGTTTTACTATACTTGTACTATTGATTTTCGTTAATGAAGGCTTTGGTTTTACTATTAGATTTGTTATGGTCAACGTTCTCTTCAGCCCCTGCATCAATTGCCATAGTATTCAAAATTTGCATTGCTACATGGATCTGTTAATAATTGATGACTTGTAAAAAGAATTTGTTTGCTTAAAATGTTGACGCTCTAGTCAATTGCTCAGTTCATGGTATTATCTATATTAACTATGATCATAGATTAACATTTGGAGTCGTTGGATGAAGCTGTAAGTCTGTAACTGTAATGTGCTGTTACAACTCTTTTATTTTGGAAATCATGGATTTAGCTAACTTGTAGCTCTTATCGCAGCTTGCTGTAGAGTACGAGAACAATGCAATGATCATCAAGGTTGATACAGACGACGAATATGAATTTTCACGCGATATGCAGGTAAAAACACACCACTCCTTTCTCCCTAACCTATTCGCCTCGTCTCTATACTGCAATGTTGTCCTAACACAAAGCATTCTCATCTACACACCTTTTCGATTATCCGCAAAGTTGGTCGTGAAAGATAGTCTTTGTTCTTACCCATATCTCTGGAAAGGTGAATCTGAGTTAAATGCGGTTTCAGGTGAGAGGACTGCCTACACTTTTCTTCATTAGCCCGGATCCAAATAAAGAAGCTATCCGCACCGAAGGTCTCATTCCAATTCAGATGATGCGAGATATCATCGATAAAGAGATGTGA ATGGCTCTTTTACAACCCCAAAAAACCCTTCAAATCACCTCCAATCTCTTCCCCATCTGTAATTTTAGCTCCTTTCGACCTTCCATTTCAATTCCTTTCTCATCCTCAAAAACCCATCATCAAAATGCGCTTCTTTCCTCTTCCAGCAGCAGAACCTTTTCACTCTCAACCACTCCAAGAAGGATTTTGTGCGAACCCCCTAAAGGAAAGTACATCCACGACGATTATCTTGTGAAGAAGATGACATCTGCCGAAGTGCAGGAGTTGGTGAAGGGGGAAAGAAATGTGCCGCTTATAATTGATTTTTATGCAACATGGTGTGGACCCTGCATTCTAATGGCTCAAGAACTTGAAATGGTATGTCTAATTACATTGAATTTTGGTATGAATTCACATCTTGCTGTAGAGTACGAGAACAATGCAATGATCATCAAGGTTGATACAGACGACGAATATGAATTTTCACGCGATATGCAGGTGAGAGGACTGCCTACACTTTTCTTCATTAGCCCGGATCCAAATAAAGAAGCTATCCGCACCGAAGGTCTCATTCCAATTCAGATGATGCGAGATATCATCGATAAAGAGATGTGA ATGGCTCTTTTACAACCCCAAAAAACCCTTCAAATCACCTCCAATCTCTTCCCCATCTGTAATTTTAGCTCCTTTCGACCTTCCATTTCAATTCCTTTCTCATCCTCAAAAACCCATCATCAAAATGCGCTTCTTTCCTCTTCCAGCAGCAGAACCTTTTCACTCTCAACCACTCCAAGAAGGATTTTGTGCGAACCCCCTAAAGGAAAGTACATCCACGACGATTATCTTGTGAAGAAGATGACATCTGCCGAAGTGCAGGAGTTGGTGAAGGGGGAAAGAAATGTGCCGCTTATAATTGATTTTTATGCAACATGGTGTGGACCCTGCATTCTAATGGCTCAAGAACTTGAAATGGTATGTCTAATTACATTGAATTTTGGTATGAATTCACATCTTGCTGTAGAGTACGAGAACAATGCAATGATCATCAAGGTTGATACAGACGACGAATATGAATTTTCACGCGATATGCAGGTGAGAGGACTGCCTACACTTTTCTTCATTAGCCCGGATCCAAATAAAGAAGCTATCCGCACCGAAGGTCTCATTCCAATTCAGATGATGCGAGATATCATCGATAAAGAGATGTGA MALLQPQKTLQITSNLFPICNFSSFRPSISIPFSSSKTHHQNALLSSSSSRTFSLSTTPRRILCEPPKGKYIHDDYLVKKMTSAEVQELVKGERNVPLIIDFYATWCGPCILMAQELEMVCLITLNFGMNSHLAVEYENNAMIIKVDTDDEYEFSRDMQVRGLPTLFFISPDPNKEAIRTEGLIPIQMMRDIIDKEM
BLAST of Lsi08G009230 vs. Swiss-Prot
Match: CITRX_ARATH (Thioredoxin-like protein CITRX, chloroplastic OS=Arabidopsis thaliana GN=CITRX PE=1 SV=1) HSP 1 Score: 222.6 bits (566), Expect = 3.7e-57 Identity = 119/207 (57.49%), Postives = 148/207 (71.50%), Query Frame = 1
BLAST of Lsi08G009230 vs. Swiss-Prot
Match: CITRX_SOLLC (Thioredoxin-like protein CITRX, chloroplastic OS=Solanum lycopersicum GN=CITRX PE=1 SV=1) HSP 1 Score: 217.6 bits (553), Expect = 1.2e-55 Identity = 111/168 (66.07%), Postives = 130/168 (77.38%), Query Frame = 1
BLAST of Lsi08G009230 vs. Swiss-Prot
Match: CITRX_SOLTU (Thioredoxin-like protein CITRX, chloroplastic OS=Solanum tuberosum GN=CITRX PE=3 SV=1) HSP 1 Score: 216.1 bits (549), Expect = 3.5e-55 Identity = 111/169 (65.68%), Postives = 132/169 (78.11%), Query Frame = 1
BLAST of Lsi08G009230 vs. Swiss-Prot
Match: CITX2_NICBE (Thioredoxin-like protein CITRX2, chloroplastic OS=Nicotiana benthamiana GN=CITRX2 PE=1 SV=1) HSP 1 Score: 210.7 bits (535), Expect = 1.5e-53 Identity = 114/189 (60.32%), Postives = 136/189 (71.96%), Query Frame = 1
BLAST of Lsi08G009230 vs. Swiss-Prot
Match: CITX1_NICBE (Thioredoxin-like protein CITRX1, chloroplastic OS=Nicotiana benthamiana GN=CITRX1 PE=2 SV=1) HSP 1 Score: 209.5 bits (532), Expect = 3.3e-53 Identity = 110/181 (60.77%), Postives = 136/181 (75.14%), Query Frame = 1
BLAST of Lsi08G009230 vs. TrEMBL
Match: A0A0A0KH97_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_6G401380 PE=4 SV=1) HSP 1 Score: 338.6 bits (867), Expect = 5.2e-90 Identity = 173/197 (87.82%), Postives = 179/197 (90.86%), Query Frame = 1
BLAST of Lsi08G009230 vs. TrEMBL
Match: A0A0B0P7W0_GOSAR (Uncharacterized protein OS=Gossypium arboreum GN=F383_01634 PE=4 SV=1) HSP 1 Score: 244.6 bits (623), Expect = 1.0e-61 Identity = 122/172 (70.93%), Postives = 142/172 (82.56%), Query Frame = 1
BLAST of Lsi08G009230 vs. TrEMBL
Match: B9GLZ3_POPTR (Uncharacterized protein OS=Populus trichocarpa GN=POPTR_0001s06590g PE=4 SV=2) HSP 1 Score: 244.6 bits (623), Expect = 1.0e-61 Identity = 122/177 (68.93%), Postives = 142/177 (80.23%), Query Frame = 1
BLAST of Lsi08G009230 vs. TrEMBL
Match: A0A067L8W2_JATCU (Uncharacterized protein OS=Jatropha curcas GN=JCGZ_24543 PE=4 SV=1) HSP 1 Score: 241.5 bits (615), Expect = 8.6e-61 Identity = 126/201 (62.69%), Postives = 152/201 (75.62%), Query Frame = 1
BLAST of Lsi08G009230 vs. TrEMBL
Match: A0A0D2TBP7_GOSRA (Uncharacterized protein OS=Gossypium raimondii GN=B456_011G216600 PE=4 SV=1) HSP 1 Score: 241.1 bits (614), Expect = 1.1e-60 Identity = 120/172 (69.77%), Postives = 142/172 (82.56%), Query Frame = 1
BLAST of Lsi08G009230 vs. TAIR10
Match: AT3G06730.1 (AT3G06730.1 Thioredoxin z) HSP 1 Score: 222.6 bits (566), Expect = 2.1e-58 Identity = 119/207 (57.49%), Postives = 148/207 (71.50%), Query Frame = 1
BLAST of Lsi08G009230 vs. TAIR10
Match: AT1G43560.1 (AT1G43560.1 thioredoxin Y2) HSP 1 Score: 53.9 bits (128), Expect = 1.3e-07 Identity = 33/119 (27.73%), Postives = 56/119 (47.06%), Query Frame = 1
BLAST of Lsi08G009230 vs. TAIR10
Match: AT1G50320.1 (AT1G50320.1 thioredoxin X) HSP 1 Score: 51.2 bits (121), Expect = 8.4e-07 Identity = 44/171 (25.73%), Postives = 71/171 (41.52%), Query Frame = 1
BLAST of Lsi08G009230 vs. NCBI nr
Match: gi|449458067|ref|XP_004146769.1| (PREDICTED: thioredoxin-like protein CITRX, chloroplastic [Cucumis sativus]) HSP 1 Score: 338.6 bits (867), Expect = 7.4e-90 Identity = 173/197 (87.82%), Postives = 179/197 (90.86%), Query Frame = 1
BLAST of Lsi08G009230 vs. NCBI nr
Match: gi|659089253|ref|XP_008445409.1| (PREDICTED: thioredoxin-like protein CITRX, chloroplastic [Cucumis melo]) HSP 1 Score: 320.1 bits (819), Expect = 2.7e-84 Identity = 165/188 (87.77%), Postives = 169/188 (89.89%), Query Frame = 1
BLAST of Lsi08G009230 vs. NCBI nr
Match: gi|1012264807|ref|XP_015947088.1| (PREDICTED: thioredoxin-like protein CITRX, chloroplastic [Arachis duranensis]) HSP 1 Score: 247.3 bits (630), Expect = 2.3e-62 Identity = 127/185 (68.65%), Postives = 144/185 (77.84%), Query Frame = 1
BLAST of Lsi08G009230 vs. NCBI nr
Match: gi|1000979733|ref|XP_015570810.1| (PREDICTED: thioredoxin-like protein CITRX, chloroplastic [Ricinus communis]) HSP 1 Score: 246.9 bits (629), Expect = 2.9e-62 Identity = 128/179 (71.51%), Postives = 144/179 (80.45%), Query Frame = 1
BLAST of Lsi08G009230 vs. NCBI nr
Match: gi|743913353|ref|XP_011000584.1| (PREDICTED: thioredoxin-like protein CITRX, chloroplastic [Populus euphratica]) HSP 1 Score: 245.4 bits (625), Expect = 8.6e-62 Identity = 123/177 (69.49%), Postives = 143/177 (80.79%), Query Frame = 1
The following BLAST results are available for this feature:
The following terms have been associated with this gene:
GO Assignments
This gene is annotated with the following GO terms.
The following mRNA feature(s) are a part of this gene:
Analysis Name: InterPro Annotations of Lagenaria siceraria
Date Performed: 2017-09-18
The following gene(s) are orthologous to this gene:
The following gene(s) are paralogous to this gene: None The following block(s) are covering this gene:
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