Lsi09G009970 (gene) Bottle gourd (USVL1VR-Ls)
The following sequences are available for this feature:
Legend: CDS Hold the cursor over a type above to highlight its positions in the sequence below.ATGCCCCAAGTCGATCGGCGGACCGGCTCATCACCGTTCCACATCCGACTGGGGCACATCGCCGGCCCCCATCCGCTTCCCTCCCGACAATTTCAAGCACTATTTGACTCTCTTTTCAAAGTCCTTTTCATCTTTCCCTCGCGGTACTTGTTTGCTATCGGTCTCTCGCCCATATTTAGCCTTGGACAGAATTTACCGCCCGATTGGGGCTGCATTCCCAAACAACCCGACTCGTTGACAGCGCCTCGTGGTGCGACAGGGTCCGAGCGCAACGGGGCTCTCACCCTCTCTGGCGCCCCCTTCCAGGGGACTTGTGCCCGGTCCGCCGCTGAGGACGCTTCTCCAGACTACAATTCGGACGTCGAGGACGCCCGATTCTCAAGCTGGGCTCTTCCCGGTTCGCTCGCCGTTACTAGGGGAATCCTTGTAAGTTTCTTTTCCTCCGCTTATTGATATGCTTAAACTCAGCGGGTAGTCCCGCCTGACCTGGGGTCGCGTCGAGAGCGTCGTCCTTTGGGAGACGGCGTTCAGAGGGTCGGTGTAGGAGTCCACAAGGAGGCGGCGTCAAATTCGCGACGCGGTACCGAGGTTGGATCAACCACCGTAGTGTCGCGACGACGGGCGCCGAGGACTCGAATTTAAGCCATCCGCGCGACGGTGCGCACGGGAGGCCAGCGTGTGCCCCCGCCCGCGCAACGAGCCCACATGGGGGGTTGCGTGGGGGGGCAGCGATGCGTGACGCCCAGGCAGACGTGCCCTCGGCCAGAAGGCTCCGGGCGCAACTTGCGTTCAAAGACTCGGTGGTTCGCGGGATCCTGCAATTCACACCAAGTATCGCATTTCGCTACGTTCTTCATCGATGCGAGAGCCGAGATATCCGTTGCCGAGAGTCGTTGTGAGTAATACGACAAGAATGCTCTGCCCCCCGCACGGCGAGGCCGGGGCAAGGGGCAGGCGAATTCATTTAAAGTTCCTTGGCGCGACCTGCGCCGGGGTTTGGTTTAGGCGCGCCGAGGGGGAGGGGAGCAGGCAAAGAGCATGCTTCCCCCCGCCCCCGGCGCGAACAATTGGTTTGTAAACGCGTTCGCGGGTCGTTTGATGTTTAGGCATCGACAATGATCCTTCCGCAGGTTCACCTACGGAAACCTTGTTACGACTTCTCCTTCCTCTAAATGATAAGGTTCAGTGGACTTCTCGCGACGTCGCGGGCAGCGAACCGCCCACGTCGCCGCGATCCGAACACTTCACCGGACCATTCAATCGGTAGGAGCGACGGGCGGTGTGTACAAAGGGCAGGGACGTAGTCAACGCGAGCTGATGACTCGCGCTTACTAGGAATTCCTCGTTGAAGACCAACAATTGCAATGATCTATCCCCATCACGATGAAATTTCAAAGATTACCCGGGCCTGTCGGCCAAGGCTATAGACTCGTTGAATACATCAGTGTAGCGCGCGTGCGGCCCAGAACATCTAAGGGCATCACAGACCTGTTATTGCCTCAAACTTCCTTGGCCTAAGCGGCCATAGTCCCTCTAAGAAGCTGGCCGCGGAGGGGTACCTCCGCATAGCTAGTTAGCAGGCTGAGGTCTCGTTCGTTAACGGAATTAACCAGACAAATCGCTCCACCAACTAAGAACGGCCATGCACCACCACCCATAGAATCAAGAAAGAGCTCTCAGTCTGTCAATCCTTACTATGTCTGGACCTGGTAAGTTTCCCCGTGTTGAGTCAAATTAAGCCGCAGGCTCCACTCCTGGTGGTGCCCTTCCGTCAATTCCTTTAAGTTTCAGCCTTGCGACCATACTCCCCCCGGAACCCAAAGACTTTGATTTCTCATAAGGTGCTGGCGGAGTCCTTAAAGCAACATCCGCCAATCCCTGGTCGGCATCGTTTATGGTTGAGACTAGGACGGTATCTGATCGTCTTCGAGCCCCCAACTTTCGTTCTTGATTAATGAAAACATCCTTGGCAAATGCTTTCGCAGTTGTTCGTCTTTCATAAATCCAAGAATTTCACCTCTGACTATGAAATACGAATGCCCCCGACTGTCCCTGTTAATCANCTAGACCGATTTTGTGATCGTGAAGATGGATGATTTCGACGTTGTGTTGGGGATAGAGTTCCTCCTCGAACACAAGGTGATCCCCATGCCCCTGGCGAAGTGCCTGGCGATCACGGGGTCTAACCCCACTGTTGTCTCTACTAGTATCAAACAACCGAATGGGTTGAAGATGATATCAGCCCTCCAGCTGAAGAGGGGACTAGTCCGTGATGAGCCCACGTTCATGGCCATCCCTATGATTGAGGACAAAAGTCTAAAAGAGACCATACCAGAGGAGATCCAAGGTGTGCTACGAGAATATGGCGATGTTATGCCTGACAGCTTGCCAAAGTCTCTACCTCCGCGAAGGGAGATAGACCACGAGATTGAGTTGTTGCCTGGGGAAAAACCCCCTGCAAAGAACGCGTATCGCATGGCCCCGCCAGAGTTGGCGGAGCTGCGAAAACAGTTAGACGAGTTGTTGAGTGCAGGGTTTATCAGACCTGTCAAAGCTCCTTATGGAGCCCCTATGCTGTTCCAAAAGAAGAAGGATGGAAGCCTCCGTATGTGTATCGATTACCGGGTCTTGAATAAACTCACAGTTCGGAACAAATATCCACTACCCATAATCACCGACTTGTTCGACCGCCTCCATGGGGCCAAGTACTTTTCAAAACTTGATCTCCGATCAGGATACTATCAAGTTCGTATTGNAAATTTCTTCACTTTGACATTCAGAGCACTGGGCAGAAATCACATTGCGTTACCATCCGCAGGGACCATTGCAATGCTTTGTTTTAATTAAACAGTCGGATTTCCCTTGTCCGTACCAGTTCTGAGTTGACTGTTCGACGCCCGGGGAAGGCCCACGAAGGAGCTGTTCCCAGTCCGTCCCCCGACCGGCACGCGGCGACCCGCTCTCGCCGTGGGAACAGCTTGAGCAGTCCACCGACAACCGACGGGTTCGGGACTGGGACCCCCGTGCCCAACCCTCAGAGCCAATCTTTTTCCCGAGGTTACGGATCCATTTTACCGACTTCCCTTGCCTACATTGTTCCATCGACCAGAGGCTGTTCACCTTGGAGACCTGATGCGGTTATGAGTACGACCGGGCGTGAGTGGCACTCGGTCCTCCGGATTTTCAAGGGCCGCCGGGGGCGCACCGGACACCACGCGACGTGCGGTGCTCTTCCAGCCACTGGACCCTACCTCCGGCTGAGCCGTTTCCAGGGTGGGCAGGCTGTTAAACAGAAAAGATAA ATGCCCCAAGTCGATCGGCGGACCGGCTCATCACCGTTCCACATCCGACTGGGGCACATCGCCGGCCCCCATCCGCTTCCCTCCCGACAATTTCAAGCACTATTTGACTCTCTTTTCAAAGTCCTTTTCATCTTTCCCTCGCGGTACTTGTTTGCTATCGGTCTCTCGCCCATATTTAGCCTTGGACAGAATTTACCGCCCGATTGGGGCTGCATTCCCAAACAACCCGACTCGTTGACAGCGCCTCGTGGTGCGACAGGGTCCGAGCGCAACGGGGCTCTCACCCTCTCTGGCGCCCCCTTCCAGGGGACTTGTGCCCGGTCCGCCGCTGAGGACGCTTCTCCAGACTACAATTCGGACGTCGAGGACGCCCGATTCTCAAGCTGGGCTCTTCCCGGTTCGCTCGCCGTTACTAGGGGAATCCTTGTAAAGGGTCGGTGTAGGAGTCCACAAGGAGGCGGCGTCAAATTCGCGACGCGGTACCGAGGTTGGATCAACCACCGTAGTGTCGCGACGACGGGCGCCGAGGACTCGAATTTAAGCCATCCGCGCGACGGCAGACGTGCCCTCGGCCAGAAGGCTCCGGGCGCAACTTGCGTTCAAAGACTCGGTGGTTCGCGGGATCCTGCAATTCACACCAAGTATCGCATTTCGCTACGTTCTTCATCGATGCGAGAGCCGAGATATCCGTTGCCGAGAGTCGTTGTGAGTAATACGACAAGAATGCTCTGCCCCCCGCACGGCGAGGCCGGGGCAAGGGGCAGGCGAATTCATTTAAAGTTCCTTGGCGCGACCTGCGCCGGGGTTTGGTTTAGGCGCGCCGAGGGGGAGGGGAGCAGGCAAAGAGCATGCTTCCCCCCGCCCCCGGCGCGAACAATTGGTTCACCTACGGAAACCTTGTTACGACTTCTCCTTCCTCTAAATGATAAGGTTCAGTGGACTTCTCGCGACGTCGCGGGCAGCGAACCGCCCACGTCGCCGCGATCCGAACACTTCACCGGACCATTCAATCGACAAATCGCTCCACCAACTAAGAACGGCCATGCACCACCACCCATAGAATCAAGAAAGAGCTCTCAGTCTGTCAATCCTTACTATGTCTGGACCTGTCGGATTTCCCTTGTCCGTACCAGTTCTGAGTTGACTGTTCGACGCCCGGGGAAGGCCCACGAAGGAGCTGTTCCCAGTCCGTCCCCCGACCGGCACGCGGCGACCCGCTCTCGCCGTGGGAACAGCTTGAGCAGTCCACCGACAACCGACGGGTTCGGGACTGGGACCCCCGTGCCCAACCCTCAGAGCCAATCTTTTTCCCGAGGTTACGGATCCATTTTACCGACTTCCCTTGCCTACATTGTTCCATCGACCAGAGGCTGTTCACCTTGGAGACCTGATGCGGTTATGAGTACGACCGGGCGTGAGTGGCACTCGGTCCTCCGGATTTTCAAGGGCCGCCGGGGGCGCACCGGACACCACGCGACGTGCGGTGCTCTTCCAGCCACTGGACCCTACCTCCGGCTGAGCCGTTTCCAGGGTGGGCAGGCTGTTAAACAGAAAAGATAA ATGCCCCAAGTCGATCGGCGGACCGGCTCATCACCGTTCCACATCCGACTGGGGCACATCGCCGGCCCCCATCCGCTTCCCTCCCGACAATTTCAAGCACTATTTGACTCTCTTTTCAAAGTCCTTTTCATCTTTCCCTCGCGGTACTTGTTTGCTATCGGTCTCTCGCCCATATTTAGCCTTGGACAGAATTTACCGCCCGATTGGGGCTGCATTCCCAAACAACCCGACTCGTTGACAGCGCCTCGTGGTGCGACAGGGTCCGAGCGCAACGGGGCTCTCACCCTCTCTGGCGCCCCCTTCCAGGGGACTTGTGCCCGGTCCGCCGCTGAGGACGCTTCTCCAGACTACAATTCGGACGTCGAGGACGCCCGATTCTCAAGCTGGGCTCTTCCCGGTTCGCTCGCCGTTACTAGGGGAATCCTTGTAAAGGGTCGGTGTAGGAGTCCACAAGGAGGCGGCGTCAAATTCGCGACGCGGTACCGAGGTTGGATCAACCACCGTAGTGTCGCGACGACGGGCGCCGAGGACTCGAATTTAAGCCATCCGCGCGACGGCAGACGTGCCCTCGGCCAGAAGGCTCCGGGCGCAACTTGCGTTCAAAGACTCGGTGGTTCGCGGGATCCTGCAATTCACACCAAGTATCGCATTTCGCTACGTTCTTCATCGATGCGAGAGCCGAGATATCCGTTGCCGAGAGTCGTTGTGAGTAATACGACAAGAATGCTCTGCCCCCCGCACGGCGAGGCCGGGGCAAGGGGCAGGCGAATTCATTTAAAGTTCCTTGGCGCGACCTGCGCCGGGGTTTGGTTTAGGCGCGCCGAGGGGGAGGGGAGCAGGCAAAGAGCATGCTTCCCCCCGCCCCCGGCGCGAACAATTGGTTCACCTACGGAAACCTTGTTACGACTTCTCCTTCCTCTAAATGATAAGGTTCAGTGGACTTCTCGCGACGTCGCGGGCAGCGAACCGCCCACGTCGCCGCGATCCGAACACTTCACCGGACCATTCAATCGACAAATCGCTCCACCAACTAAGAACGGCCATGCACCACCACCCATAGAATCAAGAAAGAGCTCTCAGTCTGTCAATCCTTACTATGTCTGGACCTGTCGGATTTCCCTTGTCCGTACCAGTTCTGAGTTGACTGTTCGACGCCCGGGGAAGGCCCACGAAGGAGCTGTTCCCAGTCCGTCCCCCGACCGGCACGCGGCGACCCGCTCTCGCCGTGGGAACAGCTTGAGCAGTCCACCGACAACCGACGGGTTCGGGACTGGGACCCCCGTGCCCAACCCTCAGAGCCAATCTTTTTCCCGAGGTTACGGATCCATTTTACCGACTTCCCTTGCCTACATTGTTCCATCGACCAGAGGCTGTTCACCTTGGAGACCTGATGCGGTTATGAGTACGACCGGGCGTGAGTGGCACTCGGTCCTCCGGATTTTCAAGGGCCGCCGGGGGCGCACCGGACACCACGCGACGTGCGGTGCTCTTCCAGCCACTGGACCCTACCTCCGGCTGAGCCGTTTCCAGGGTGGGCAGGCTGTTAAACAGAAAAGATAA MPQVDRRTGSSPFHIRLGHIAGPHPLPSRQFQALFDSLFKVLFIFPSRYLFAIGLSPIFSLGQNLPPDWGCIPKQPDSLTAPRGATGSERNGALTLSGAPFQGTCARSAAEDASPDYNSDVEDARFSSWALPGSLAVTRGILVKGRCRSPQGGGVKFATRYRGWINHRSVATTGAEDSNLSHPRDGRRALGQKAPGATCVQRLGGSRDPAIHTKYRISLRSSSMREPRYPLPRVVVSNTTRMLCPPHGEAGARGRRIHLKFLGATCAGVWFRRAEGEGSRQRACFPPPPARTIGSPTETLLRLLLPLNDKVQWTSRDVAGSEPPTSPRSEHFTGPFNRQIAPPTKNGHAPPPIESRKSSQSVNPYYVWTCRISLVRTSSELTVRRPGKAHEGAVPSPSPDRHAATRSRRGNSLSSPPTTDGFGTGTPVPNPQSQSFSRGYGSILPTSLAYIVPSTRGCSPWRPDAVMSTTGREWHSVLRIFKGRRGRTGHHATCGALPATGPYLRLSRFQGGQAVKQKR
BLAST of Lsi09G009970 vs. Swiss-Prot
Match: ART3_YEAST (Putative uncharacterized protein ART3 OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=ART3 PE=5 SV=1) HSP 1 Score: 55.1 bits (131), Expect = 2.7e-06 Identity = 28/39 (71.79%), Postives = 30/39 (76.92%), Query Frame = 1
BLAST of Lsi09G009970 vs. TrEMBL
Match: A0A0A0L1K6_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_4G243390 PE=4 SV=1) HSP 1 Score: 366.7 bits (940), Expect = 4.7e-98 Identity = 203/296 (68.58%), Postives = 214/296 (72.30%), Query Frame = 1
BLAST of Lsi09G009970 vs. TrEMBL
Match: I1LXQ4_SOYBN (Uncharacterized protein OS=Glycine max PE=4 SV=1) HSP 1 Score: 358.2 bits (918), Expect = 1.7e-95 Identity = 212/379 (55.94%), Postives = 234/379 (61.74%), Query Frame = 1
BLAST of Lsi09G009970 vs. TrEMBL
Match: I1LXT0_SOYBN (Uncharacterized protein OS=Glycine max PE=4 SV=1) HSP 1 Score: 358.2 bits (918), Expect = 1.7e-95 Identity = 212/379 (55.94%), Postives = 234/379 (61.74%), Query Frame = 1
BLAST of Lsi09G009970 vs. TrEMBL
Match: I1LXS9_SOYBN (Uncharacterized protein OS=Glycine max PE=4 SV=1) HSP 1 Score: 358.2 bits (918), Expect = 1.7e-95 Identity = 212/379 (55.94%), Postives = 234/379 (61.74%), Query Frame = 1
BLAST of Lsi09G009970 vs. TrEMBL
Match: A0A0A0KEK9_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_6G239680 PE=4 SV=1) HSP 1 Score: 331.6 bits (849), Expect = 1.7e-87 Identity = 169/203 (83.25%), Postives = 174/203 (85.71%), Query Frame = 1
BLAST of Lsi09G009970 vs. NCBI nr
Match: gi|700198833|gb|KGN53991.1| (hypothetical protein Csa_4G243390 [Cucumis sativus]) HSP 1 Score: 366.7 bits (940), Expect = 6.7e-98 Identity = 203/296 (68.58%), Postives = 214/296 (72.30%), Query Frame = 1
BLAST of Lsi09G009970 vs. NCBI nr
Match: gi|700192065|gb|KGN47269.1| (hypothetical protein Csa_6G239680 [Cucumis sativus]) HSP 1 Score: 331.6 bits (849), Expect = 2.4e-87 Identity = 169/203 (83.25%), Postives = 174/203 (85.71%), Query Frame = 1
BLAST of Lsi09G009970 vs. NCBI nr
Match: gi|922327221|ref|XP_013443003.1| (hypothetical protein MTR_0052s0140 [Medicago truncatula]) HSP 1 Score: 283.1 bits (723), Expect = 9.8e-73 Identity = 163/265 (61.51%), Postives = 175/265 (66.04%), Query Frame = 1
BLAST of Lsi09G009970 vs. NCBI nr
Match: gi|922327207|ref|XP_013442996.1| (senescence-associated protein [Medicago truncatula]) HSP 1 Score: 274.6 bits (701), Expect = 3.5e-70 Identity = 187/385 (48.57%), Postives = 205/385 (53.25%), Query Frame = 1
BLAST of Lsi09G009970 vs. NCBI nr
Match: gi|303291416|ref|XP_003064993.1| (predicted protein, partial [Micromonas pusilla CCMP1545]) HSP 1 Score: 265.0 bits (676), Expect = 2.8e-67 Identity = 133/149 (89.26%), Postives = 135/149 (90.60%), Query Frame = 1
The following BLAST results are available for this feature:
The following terms have been associated with this gene:
GO Assignments
This gene is annotated with the following GO terms.
The following mRNA feature(s) are a part of this gene:
Analysis Name: InterPro Annotations of Lagenaria siceraria
Date Performed: 2017-09-18
The following gene(s) are orthologous to this gene:
The following gene(s) are paralogous to this gene: None The following block(s) are covering this gene: None |