CmoCh15G010580 (gene) Cucurbita moschata (Rifu) | Cucurbit Genomics Database (CuGenDB)

Overview


Name	CmoCh15G010580
Type	gene
Organism	Cucurbita moschata (Cucurbita moschata (Rifu))
Description	Senescence-associated protein, putative
Location	Cmo_Chr15 : 6881626 .. 6882792 (+)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGAACGCTTGGCTGCCACAAGCCAGTTATCCCTGTGGTAACTTTTCTGACACCTCTAGCTTCAAATTCCGAAGGTCTAAAGGATCGATAGGCCACGCTTTCACGGTTCGTATTCGTACTGGAAATCAGAATCAAACGAGCTTTTACCCTTTTGTTCCACACGAGATTTCTGTTCTCGTTGAGCTCATCTTAGGACACCTGCGTTATCTTTTAACAGATGTGCCGCCCCAGCCAAACTCCCCACCTGACAATGTCTTCCGCCCGGATCGGCCCACCGAAGTAGGCCTTGGGTCCAAAAAGAGGGGCAGTGCCCCGCTTCCGATTCACGGAATAAGTAAAATAACGTTAAAAGTAGTGGTATTTCACTTTCGCCTTTCGGCTCCCACTTATCCTACACCTCTCAAGTCATTTCACAAAGTCGGACTAGAGTCAAGCTCAACAGGGTCTTCTTTCCCCGCTGATTCTGCCAAGCCCGTTCCCTTGGCTGTGGTTTCGCTGGATAGTAGACAGGGACAGTGGGAATCTCGTTAATCCATTCATGCGCGTCACTAATTAGATGACGAGGCATTTGGCTACCTTAAGAGAGTCATAGTTACTCCCGCCGTTTACCCGCGCTTGGTTGAATTTCTTCACTTTGACATTCAGAGCACTGGGCAGAAATCACATTGCGTTAGCATCCGCAGGGACCATCGCAATGCTTTGTTTTAATTAAACAGTCGGATTCCCCTTGTCCGTACCAGTTCTGAGTTGACTGTTCGACGCCCGGGGAAGGCCCCCGAAGGAGCCGTTCCCAGTCCGTCCCCCGGCCGGCACGCAGCGACCCGCTCTCGCCGCGGGAGCAGCTCGAGCAGTCCACCAACAGCCGACGGGTTCGGGACTGGGACCCCCGTGCCCAGCCCTCAGAGCCAATCCTTTTCCCGAGGTTACGGATCCATTTTGCCGACTTCCCTTGCCTACATTGTTCCATTGACCAGAGGCTGTTCACCTTGGAGACCTGATGCGGTTATGAGTACGACCGGGCGTGGGAGGCACTCGGTCCTCCAGATTTTCAAGGGCCGCCGGGGGCGCACCGGACACCACGCGACGTGCGATGCTCTTCCAGCCGCTGGACCCTACCTCCGGCTGAGCCGTTTCCAGGGTGGGCAGGCTGTTAAACAGAAAAGATAA

mRNA sequence

ATGAACGCTTGGCTGCCACAAGCCAGTTATCCCTGTGGTAACTTTTCTGACACCTCTAGCTTCAAATTCCGAAGGTCTAAAGGATCGATAGGCCACGCTTTCACGGTTCGTATTCGTACTGGAAATCAGAATCAAACGAGCTTTTACCCTTTTGTTCCACACGAGATTTCTGTTCTCGTTGAGCTCATCTTAGGACACCTGCGTTATCTTTTAACAGATGTGCCGCCCCAGCCAAACTCCCCACCTGACAATGTCTTCCGCCCGGATCGGCCCACCGAAGTAGGCCTTGGGTCCAAAAAGAGGGGCAGTGCCCCGCTTCCGATTCACGGAATAAGTAAAATAACGTTAAAAGTAGTGGTATTTCACTTTCGCCTTTCGGCTCCCACTTATCCTACACCTCTCAAGTCATTTCACAAAGTCGGACTAGAGTCAAGCTCAACAGGGTCTTCTTTCCCCGCTGATTCTGCCAAGCCCGTTCCCTTGGCTGTGGTTTCGCTGGATAGTAGACAGGGACATCGGATTCCCCTTGTCCGTACCAGTTCTGAGTTGACTGTTCGACGCCCGGGGAAGGCCCCCGAAGGAGCCGTTCCCAGTCCGTCCCCCGGCCGGCACGCAGCGACCCGCTCTCGCCGCGGGAGCAGCTCGAGCAGTCCACCAACAGCCGACGGGTTCGGGACTGGGACCCCCGTGCCCAGCCCTCAGAGCCAATCCTTTTCCCGAGGTTACGGATCCATTTTGCCGACTTCCCTTGCCTACATTGTTCCATTGACCAGAGGCTGTTCACCTTGGAGACCTGATGCGGTTATGAGTACGACCGGGCGTGGGAGGCACTCGGTCCTCCAGATTTTCAAGGGCCGCCGGGGGCGCACCGGACACCACGCGACGTGCGATGCTCTTCCAGCCGCTGGACCCTACCTCCGGCTGAGCCGTTTCCAGGGTGGGCAGGCTGTTAAACAGAAAAGATAA

Coding sequence (CDS)

ATGAACGCTTGGCTGCCACAAGCCAGTTATCCCTGTGGTAACTTTTCTGACACCTCTAGCTTCAAATTCCGAAGGTCTAAAGGATCGATAGGCCACGCTTTCACGGTTCGTATTCGTACTGGAAATCAGAATCAAACGAGCTTTTACCCTTTTGTTCCACACGAGATTTCTGTTCTCGTTGAGCTCATCTTAGGACACCTGCGTTATCTTTTAACAGATGTGCCGCCCCAGCCAAACTCCCCACCTGACAATGTCTTCCGCCCGGATCGGCCCACCGAAGTAGGCCTTGGGTCCAAAAAGAGGGGCAGTGCCCCGCTTCCGATTCACGGAATAAGTAAAATAACGTTAAAAGTAGTGGTATTTCACTTTCGCCTTTCGGCTCCCACTTATCCTACACCTCTCAAGTCATTTCACAAAGTCGGACTAGAGTCAAGCTCAACAGGGTCTTCTTTCCCCGCTGATTCTGCCAAGCCCGTTCCCTTGGCTGTGGTTTCGCTGGATAGTAGACAGGGACATCGGATTCCCCTTGTCCGTACCAGTTCTGAGTTGACTGTTCGACGCCCGGGGAAGGCCCCCGAAGGAGCCGTTCCCAGTCCGTCCCCCGGCCGGCACGCAGCGACCCGCTCTCGCCGCGGGAGCAGCTCGAGCAGTCCACCAACAGCCGACGGGTTCGGGACTGGGACCCCCGTGCCCAGCCCTCAGAGCCAATCCTTTTCCCGAGGTTACGGATCCATTTTGCCGACTTCCCTTGCCTACATTGTTCCATTGACCAGAGGCTGTTCACCTTGGAGACCTGATGCGGTTATGAGTACGACCGGGCGTGGGAGGCACTCGGTCCTCCAGATTTTCAAGGGCCGCCGGGGGCGCACCGGACACCACGCGACGTGCGATGCTCTTCCAGCCGCTGGACCCTACCTCCGGCTGAGCCGTTTCCAGGGTGGGCAGGCTGTTAAACAGAAAAGATAA

Homology

[Close]

BLAST of CmoCh15G010580 vs. Swiss-Prot
Match: ART2_YEAST (Putative uncharacterized protein ART2 OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=ART2 PE=5 SV=1)

HSP 1 Score: 86.7 bits (213), Expect = 5.2e-16
Identity = 43/56 (76.79%), Postives = 44/56 (78.57%), Query Frame = 1


Query: 36 VRIRTGNQNQTSFYPFVPHEISVLVELILGHLRYLLTDVPPQPNSPPDNVFRPDRP 92
          V I T NQNQ  FYPFV  EISVL E  LGHLRY LTDVPPQPNSPPDNVF PD+P
Sbjct: 2  VCIHTENQNQGGFYPFVLLEISVLHEPPLGHLRYRLTDVPPQPNSPPDNVFNPDQP 57

[Close]

BLAST of CmoCh15G010580 vs. Swiss-Prot
Match: RRT15_YEAST (Regulator of rDNA transcription protein 15 OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=RRT15 PE=3 SV=1)

HSP 1 Score: 68.6 bits (166), Expect = 1.5e-10
Identity = 35/46 (76.09%), Postives = 35/46 (76.09%), Query Frame = 1


Query: 36 VRIRTGNQNQTSFYPFVPHEISVLVELILGHLRYLLTDVPPQPNSP 82
          V I T NQNQ  FYPFV  EISVL E  LGHLRY LTDVPPQPNSP
Sbjct: 2  VCIHTENQNQGDFYPFVLLEISVLHESPLGHLRYRLTDVPPQPNSP 47

[Close]

BLAST of CmoCh15G010580 vs. TrEMBL
Match: I1LXS9_SOYBN (Uncharacterized protein OS=Glycine max PE=4 SV=1)

HSP 1 Score: 522.7 bits (1345), Expect = 3.2e-145
Identity = 267/317 (84.23%), Postives = 272/317 (85.80%), Query Frame = 1


Query: 1     MNAWLPQASYPCGNFSDTSSFKFRRSKGSIGHAFTVRIRTGNQNQTSFYPFVPHEISVLV 60
             MNAWLPQASYPCGNFSDTSSFKFRR+KGSIGHAFTVRIRTGNQNQTSFYPFVPHEISVLV
Sbjct: 13178 MNAWLPQASYPCGNFSDTSSFKFRRTKGSIGHAFTVRIRTGNQNQTSFYPFVPHEISVLV 13237

Query: 61    ELILGHLRYLLTDVPPQPNSPPDNVFRPDRPTEVGLGSKKRGSAPLPIHGISKITLKVVV 120
             ELILGHLRYLLTDVPPQPNSPPDNVFRPDRP E  LGSKKRGSAPLPIHGI         
Sbjct: 13238 ELILGHLRYLLTDVPPQPNSPPDNVFRPDRPAEADLGSKKRGSAPLPIHGI--------- 13297

Query: 121   FHFRLSAPTYPTPLKSFHKVGLESSSTGSSFPADSAKPVPLAVVSLDSRQGHRIPLVRTS 180
                                +GLESSSTGSSFPADSAKPVPLAVVSLDSRQGH        
Sbjct: 13298 -------------------IGLESSSTGSSFPADSAKPVPLAVVSLDSRQGH-------- 13357

Query: 181   SELTVRRPGKAPEGAVPSPSPGRHAATRSRRGSSSSSPPTADGFGTGTPVPSPQSQSFSR 240
             SELTVRRPGK PEG VP+PSP RHA TRSRRGSSSSSPPTADGFGTGTPVPSPQSQSFSR
Sbjct: 13358 SELTVRRPGKRPEGPVPNPSPDRHATTRSRRGSSSSSPPTADGFGTGTPVPSPQSQSFSR 13417

Query: 241   GYGSILPTSLAYIVPLTRGCSPWRPDAVMSTTGRGRHSVLQIFKGRRGRTGHHATCDALP 300
             GYGSILPTSLAYIVP TRGCSPWRPDAVMSTTGRGRHSVL+IFKGRRGRTGHHATC ALP
Sbjct: 13418 GYGSILPTSLAYIVPSTRGCSPWRPDAVMSTTGRGRHSVLRIFKGRRGRTGHHATCGALP 13458

Query: 301   AAGPYLRLSRFQGGQAV 318
             AAGPYLRLSRFQGGQA+
Sbjct: 13478 AAGPYLRLSRFQGGQAI 13458

[Close]

BLAST of CmoCh15G010580 vs. TrEMBL
Match: A0A072TJF5_MEDTR (Senescence-associated protein, putative OS=Medicago truncatula GN=MTR_0055s0050 PE=4 SV=1)

HSP 1 Score: 514.2 bits (1323), Expect = 1.1e-142
Identity = 265/317 (83.60%), Postives = 273/317 (86.12%), Query Frame = 1


Query: 1   MNAWLPQASYPCGNFSDTSSFKFRRSKGSIGHAFTVRIRTGNQNQTSFYPFVPHEISVLV 60
           MNAWLPQASYPCGNFSDTSSFKFRRSKGSIGHAFTVRIRTGNQNQTSFYPFVPHEISVLV
Sbjct: 145 MNAWLPQASYPCGNFSDTSSFKFRRSKGSIGHAFTVRIRTGNQNQTSFYPFVPHEISVLV 204

Query: 61  ELILGHLRYLLTDVPPQPNSPPDNVFRPDRPTEVGLGSKKRGSAPLPIHGISKITLKVVV 120
           ELILGHLRYLLTDVPPQPNSPPDNVFRPDRPT+VGLGSKKRGSAP PIHGISKITLKVVV
Sbjct: 205 ELILGHLRYLLTDVPPQPNSPPDNVFRPDRPTKVGLGSKKRGSAPPPIHGISKITLKVVV 264

Query: 121 FHFRLSAPTYPTPLKSFHKVGLESSSTGSSFPADSAKPVPLAVVSLDSRQGHRIPLVRTS 180
           FHF                +GLESSSTGSSFPADSAKPVPLAVVSLDSRQG         
Sbjct: 265 FHF----------------LGLESSSTGSSFPADSAKPVPLAVVSLDSRQG--------- 324

Query: 181 SELTVRRPGKAPEGAVPSPSPGRHAATRSRRGSSSSSPPTADGFGTGTPVPSPQSQSFSR 240
                    + P+G VPSPSP RHA+TRSRRGSSSSSP TADGF TGTPVPSPQSQSFSR
Sbjct: 325 ---------QGPKGPVPSPSPDRHASTRSRRGSSSSSPSTADGFETGTPVPSPQSQSFSR 384

Query: 241 GYGSILPTSLAYIVPLTRGCSPWRPDAVMSTTGRGRHSVLQIFKGRRGRTGHHATCDALP 300
           GYGSILPTSLAYIVP TRGCSPWRPDAVMSTTG GRHSVL+IFKGR+GRTGHHATC ALP
Sbjct: 385 GYGSILPTSLAYIVPSTRGCSPWRPDAVMSTTGHGRHSVLRIFKGRQGRTGHHATCGALP 427

Query: 301 AAGPYLRLSRFQGGQAV 318
           AAG YLRLSRFQGGQA+
Sbjct: 445 AAGTYLRLSRFQGGQAI 427

[Close]

BLAST of CmoCh15G010580 vs. TrEMBL
Match: A0A0D2ZQ58_BRAOL (Uncharacterized protein OS=Brassica oleracea var. oleracea PE=4 SV=1)

HSP 1 Score: 505.8 bits (1301), Expect = 4.0e-140
Identity = 262/321 (81.62%), Postives = 266/321 (82.87%), Query Frame = 1


Query: 1   MNAWLPQASYPCGNFSDTSSFKFRRSKGSIGHAFTVRIRTGNQNQTSFYPFVPHEISVLV 60
           MNAWLPQASYPCGNFSDTSSFKFRRSKGSIGHAFTVRIRT NQNQTSFYPFVPHEISVLV
Sbjct: 52  MNAWLPQASYPCGNFSDTSSFKFRRSKGSIGHAFTVRIRTENQNQTSFYPFVPHEISVLV 111

Query: 61  ELILGHLRYLLTDVPPQPNSPPDNVFRPDRPTEVGLGSKKRGSAPLPIHGISKITLKVVV 120
           ELILGHL YLLTDVPPQPNSPPDNV RPDRP E  LGSK+RG  P               
Sbjct: 112 ELILGHLHYLLTDVPPQPNSPPDNVLRPDRPAEASLGSKRRGCYPA-------------- 171

Query: 121 FHFRLSAPTYPTPLKSFHKVGLESSSTGSSFPADSAKPVPLAVVSLDSRQGHRIPLVRTS 180
                          S  ++GLESSSTGSSFPADSAKPVPLAVVSLDSRQGHRIPLVRTS
Sbjct: 172 ---------------SDSRIGLESSSTGSSFPADSAKPVPLAVVSLDSRQGHRIPLVRTS 231

Query: 181 SELTVRRPGKAPEGAVPSPSPGRHAATRSRRGSSSSSPPTADGFGTGTPVPSPQSQSFSR 240
           SEL VRRPGKAPE AVPSPSPGRH A RSR  S SSSPPT DGFGTGTP PSPQSQSFSR
Sbjct: 232 SELAVRRPGKAPERAVPSPSPGRHEAVRSRHVSGSSSPPTVDGFGTGTPEPSPQSQSFSR 291

Query: 241 GYGSILPTSLAYIVPLTRGCSPWRPDAVMSTTGRGRHSVLQIFKGRRGRTGHHATCDALP 300
            YGSILPTSLAYIVP TRGCSPWRPDAVMSTTGR RHSVL+IFKGRR  TGHHATC ALP
Sbjct: 292 SYGSILPTSLAYIVPSTRGCSPWRPDAVMSTTGRERHSVLRIFKGRRECTGHHATCGALP 343

Query: 301 AAGPYLRLSRFQGGQAVKQKR 322
           AAGPYLRLSRFQGGQAVKQKR
Sbjct: 352 AAGPYLRLSRFQGGQAVKQKR 343

[Close]

BLAST of CmoCh15G010580 vs. TrEMBL
Match: I1LXQ4_SOYBN (Uncharacterized protein OS=Glycine max PE=4 SV=1)

HSP 1 Score: 497.3 bits (1279), Expect = 1.4e-137
Identity = 256/317 (80.76%), Postives = 262/317 (82.65%), Query Frame = 1


Query: 1   MNAWLPQASYPCGNFSDTSSFKFRRSKGSIGHAFTVRIRTGNQNQTSFYPFVPHEISVLV 60
           MNAWLPQASYPCGNFSDTSSFKFRR+KGSIGHAFTVRIRTGNQNQTSFYPFVPHEISVLV
Sbjct: 223 MNAWLPQASYPCGNFSDTSSFKFRRTKGSIGHAFTVRIRTGNQNQTSFYPFVPHEISVLV 282

Query: 61  ELILGHLRYLLTDVPPQPNSPPDNVFRPDRPTEVGLGSKKRGSAPLPIHGISKITLKVVV 120
           ELILGHLRYLLTDVPPQPNSPPDNVFRPDRP E  LGSKKRGSAPLPIHGI         
Sbjct: 283 ELILGHLRYLLTDVPPQPNSPPDNVFRPDRPAEADLGSKKRGSAPLPIHGI--------- 342

Query: 121 FHFRLSAPTYPTPLKSFHKVGLESSSTGSSFPADSAKPVPLAVVSLDSRQGHRIPLVRTS 180
                              +GLESSSTGSSFPADSAKPVPLAVVSLDSRQG         
Sbjct: 343 -------------------IGLESSSTGSSFPADSAKPVPLAVVSLDSRQG--------- 402

Query: 181 SELTVRRPGKAPEGAVPSPSPGRHAATRSRRGSSSSSPPTADGFGTGTPVPSPQSQSFSR 240
                    + PEG VP+PSP RHA TRSRRGSSSSSPPTADGFGTGTPVPSPQSQSFSR
Sbjct: 403 ---------QGPEGPVPNPSPDRHATTRSRRGSSSSSPPTADGFGTGTPVPSPQSQSFSR 462

Query: 241 GYGSILPTSLAYIVPLTRGCSPWRPDAVMSTTGRGRHSVLQIFKGRRGRTGHHATCDALP 300
           GYGSILPTSLAYIVP TRGCSPWRPDAVMSTTGRGRHSVL+IFKGRRGRTGHHATC ALP
Sbjct: 463 GYGSILPTSLAYIVPSTRGCSPWRPDAVMSTTGRGRHSVLRIFKGRRGRTGHHATCGALP 493

Query: 301 AAGPYLRLSRFQGGQAV 318
           AAGPYLRLSRFQGGQA+
Sbjct: 523 AAGPYLRLSRFQGGQAI 493

[Close]

BLAST of CmoCh15G010580 vs. TrEMBL
Match: I1LXT0_SOYBN (Uncharacterized protein OS=Glycine max PE=4 SV=1)

HSP 1 Score: 497.3 bits (1279), Expect = 1.4e-137
Identity = 256/317 (80.76%), Postives = 262/317 (82.65%), Query Frame = 1


Query: 1    MNAWLPQASYPCGNFSDTSSFKFRRSKGSIGHAFTVRIRTGNQNQTSFYPFVPHEISVLV 60
            MNAWLPQASYPCGNFSDTSSFKFRR+KGSIGHAFTVRIRTGNQNQTSFYPFVPHEISVLV
Sbjct: 6109 MNAWLPQASYPCGNFSDTSSFKFRRTKGSIGHAFTVRIRTGNQNQTSFYPFVPHEISVLV 6168

Query: 61   ELILGHLRYLLTDVPPQPNSPPDNVFRPDRPTEVGLGSKKRGSAPLPIHGISKITLKVVV 120
            ELILGHLRYLLTDVPPQPNSPPDNVFRPDRP E  LGSKKRGSAPLPIHGI         
Sbjct: 6169 ELILGHLRYLLTDVPPQPNSPPDNVFRPDRPAEADLGSKKRGSAPLPIHGI--------- 6228

Query: 121  FHFRLSAPTYPTPLKSFHKVGLESSSTGSSFPADSAKPVPLAVVSLDSRQGHRIPLVRTS 180
                               +GLESSSTGSSFPADSAKPVPLAVVSLDSRQG         
Sbjct: 6229 -------------------IGLESSSTGSSFPADSAKPVPLAVVSLDSRQG--------- 6288

Query: 181  SELTVRRPGKAPEGAVPSPSPGRHAATRSRRGSSSSSPPTADGFGTGTPVPSPQSQSFSR 240
                     + PEG VP+PSP RHA TRSRRGSSSSSPPTADGFGTGTPVPSPQSQSFSR
Sbjct: 6289 ---------QGPEGPVPNPSPDRHATTRSRRGSSSSSPPTADGFGTGTPVPSPQSQSFSR 6348

Query: 241  GYGSILPTSLAYIVPLTRGCSPWRPDAVMSTTGRGRHSVLQIFKGRRGRTGHHATCDALP 300
            GYGSILPTSLAYIVP TRGCSPWRPDAVMSTTGRGRHSVL+IFKGRRGRTGHHATC ALP
Sbjct: 6349 GYGSILPTSLAYIVPSTRGCSPWRPDAVMSTTGRGRHSVLRIFKGRRGRTGHHATCGALP 6379

Query: 301  AAGPYLRLSRFQGGQAV 318
            AAGPYLRLSRFQGGQA+
Sbjct: 6409 AAGPYLRLSRFQGGQAI 6379

[Close]

BLAST of CmoCh15G010580 vs. NCBI nr
Match: gi|922327141|ref|XP_013442963.1| (senescence-associated protein, putative [Medicago truncatula])

HSP 1 Score: 514.2 bits (1323), Expect = 1.6e-142
Identity = 265/317 (83.60%), Postives = 273/317 (86.12%), Query Frame = 1


Query: 1   MNAWLPQASYPCGNFSDTSSFKFRRSKGSIGHAFTVRIRTGNQNQTSFYPFVPHEISVLV 60
           MNAWLPQASYPCGNFSDTSSFKFRRSKGSIGHAFTVRIRTGNQNQTSFYPFVPHEISVLV
Sbjct: 145 MNAWLPQASYPCGNFSDTSSFKFRRSKGSIGHAFTVRIRTGNQNQTSFYPFVPHEISVLV 204

Query: 61  ELILGHLRYLLTDVPPQPNSPPDNVFRPDRPTEVGLGSKKRGSAPLPIHGISKITLKVVV 120
           ELILGHLRYLLTDVPPQPNSPPDNVFRPDRPT+VGLGSKKRGSAP PIHGISKITLKVVV
Sbjct: 205 ELILGHLRYLLTDVPPQPNSPPDNVFRPDRPTKVGLGSKKRGSAPPPIHGISKITLKVVV 264

Query: 121 FHFRLSAPTYPTPLKSFHKVGLESSSTGSSFPADSAKPVPLAVVSLDSRQGHRIPLVRTS 180
           FHF                +GLESSSTGSSFPADSAKPVPLAVVSLDSRQG         
Sbjct: 265 FHF----------------LGLESSSTGSSFPADSAKPVPLAVVSLDSRQG--------- 324

Query: 181 SELTVRRPGKAPEGAVPSPSPGRHAATRSRRGSSSSSPPTADGFGTGTPVPSPQSQSFSR 240
                    + P+G VPSPSP RHA+TRSRRGSSSSSP TADGF TGTPVPSPQSQSFSR
Sbjct: 325 ---------QGPKGPVPSPSPDRHASTRSRRGSSSSSPSTADGFETGTPVPSPQSQSFSR 384

Query: 241 GYGSILPTSLAYIVPLTRGCSPWRPDAVMSTTGRGRHSVLQIFKGRRGRTGHHATCDALP 300
           GYGSILPTSLAYIVP TRGCSPWRPDAVMSTTG GRHSVL+IFKGR+GRTGHHATC ALP
Sbjct: 385 GYGSILPTSLAYIVPSTRGCSPWRPDAVMSTTGHGRHSVLRIFKGRQGRTGHHATCGALP 427

Query: 301 AAGPYLRLSRFQGGQAV 318
           AAG YLRLSRFQGGQA+
Sbjct: 445 AAGTYLRLSRFQGGQAI 427

[Close]

BLAST of CmoCh15G010580 vs. NCBI nr
Match: gi|922327219|ref|XP_013443002.1| (senescence-associated protein [Medicago truncatula])

HSP 1 Score: 495.4 bits (1274), Expect = 7.7e-137
Identity = 256/317 (80.76%), Postives = 263/317 (82.97%), Query Frame = 1


Query: 1   MNAWLPQASYPCGNFSDTSSFKFRRSKGSIGHAFTVRIRTGNQNQTSFYPFVPHEISVLV 60
           MNAWLPQASYPCGNFSDTSSFKFRRSKGSIGHAFTVRIRTGNQNQTSFYPFVPHEISVLV
Sbjct: 16  MNAWLPQASYPCGNFSDTSSFKFRRSKGSIGHAFTVRIRTGNQNQTSFYPFVPHEISVLV 75

Query: 61  ELILGHLRYLLTDVPPQPNSPPDNVFRPDRPTEVGLGSKKRGSAPLPIHGISKITLKVVV 120
           ELILGHLRYLLTDVPPQPNSPPDNVFRPDRPT+VGLGSKKRGSAP PIHGI         
Sbjct: 76  ELILGHLRYLLTDVPPQPNSPPDNVFRPDRPTKVGLGSKKRGSAPPPIHGI--------- 135

Query: 121 FHFRLSAPTYPTPLKSFHKVGLESSSTGSSFPADSAKPVPLAVVSLDSRQGHRIPLVRTS 180
                              +GLESSSTGSSFPADSAKPVPLAVVSLDSRQG         
Sbjct: 136 -------------------IGLESSSTGSSFPADSAKPVPLAVVSLDSRQG--------- 195

Query: 181 SELTVRRPGKAPEGAVPSPSPGRHAATRSRRGSSSSSPPTADGFGTGTPVPSPQSQSFSR 240
                    + P+G VPSPSP RHA+TRSRRGSSSSSPPTADGF TGTPVPSPQSQSFSR
Sbjct: 196 ---------QGPKGPVPSPSPDRHASTRSRRGSSSSSPPTADGFETGTPVPSPQSQSFSR 255

Query: 241 GYGSILPTSLAYIVPLTRGCSPWRPDAVMSTTGRGRHSVLQIFKGRRGRTGHHATCDALP 300
           GYGSILPTSLAYIVP TRGCSPWRPDAVMSTTG GRHSVLQIFKGR+GRTGHHATC ALP
Sbjct: 256 GYGSILPTSLAYIVPSTRGCSPWRPDAVMSTTGHGRHSVLQIFKGRQGRTGHHATCGALP 286

Query: 301 AAGPYLRLSRFQGGQAV 318
           AAGPYLRLSRFQGGQA+
Sbjct: 316 AAGPYLRLSRFQGGQAI 286

[Close]

BLAST of CmoCh15G010580 vs. NCBI nr
Match: gi|922327147|ref|XP_013442966.1| (senescence-associated protein [Medicago truncatula])

HSP 1 Score: 493.8 bits (1270), Expect = 2.3e-136
Identity = 255/317 (80.44%), Postives = 263/317 (82.97%), Query Frame = 1


Query: 1   MNAWLPQASYPCGNFSDTSSFKFRRSKGSIGHAFTVRIRTGNQNQTSFYPFVPHEISVLV 60
           MNAWLPQASYPCGNFSDTSSFKFRRSKGSIGHAFTVRIRTGNQNQTSFYPFVPHEISVLV
Sbjct: 16  MNAWLPQASYPCGNFSDTSSFKFRRSKGSIGHAFTVRIRTGNQNQTSFYPFVPHEISVLV 75

Query: 61  ELILGHLRYLLTDVPPQPNSPPDNVFRPDRPTEVGLGSKKRGSAPLPIHGISKITLKVVV 120
           ELILGHLRYLLTDVPPQPNSPPDNVFRPDRPT+VGLGSKKRGSAP PIHGI         
Sbjct: 76  ELILGHLRYLLTDVPPQPNSPPDNVFRPDRPTKVGLGSKKRGSAPPPIHGI--------- 135

Query: 121 FHFRLSAPTYPTPLKSFHKVGLESSSTGSSFPADSAKPVPLAVVSLDSRQGHRIPLVRTS 180
                              +GLESSSTGSSFPADSAKPVPLAVVSLDSRQG         
Sbjct: 136 -------------------IGLESSSTGSSFPADSAKPVPLAVVSLDSRQG--------- 195

Query: 181 SELTVRRPGKAPEGAVPSPSPGRHAATRSRRGSSSSSPPTADGFGTGTPVPSPQSQSFSR 240
                    + P+G VPSPSP RHA+TRSRRGSSSSSPPTADGF TGTPVPSPQSQSFSR
Sbjct: 196 ---------QGPKGPVPSPSPDRHASTRSRRGSSSSSPPTADGFETGTPVPSPQSQSFSR 255

Query: 241 GYGSILPTSLAYIVPLTRGCSPWRPDAVMSTTGRGRHSVLQIFKGRRGRTGHHATCDALP 300
           GYGSILPTSLAYIVP TRGCSPWRPDAVMSTTG GRHSVL+IFKGR+GRTGHHATC ALP
Sbjct: 256 GYGSILPTSLAYIVPSTRGCSPWRPDAVMSTTGHGRHSVLRIFKGRQGRTGHHATCGALP 286

Query: 301 AAGPYLRLSRFQGGQAV 318
           AAGPYLRLSRFQGGQA+
Sbjct: 316 AAGPYLRLSRFQGGQAI 286

[Close]

BLAST of CmoCh15G010580 vs. NCBI nr
Match: gi|922327153|ref|XP_013442969.1| (senescence-associated protein [Medicago truncatula])

HSP 1 Score: 493.8 bits (1270), Expect = 2.3e-136
Identity = 255/317 (80.44%), Postives = 263/317 (82.97%), Query Frame = 1


Query: 1   MNAWLPQASYPCGNFSDTSSFKFRRSKGSIGHAFTVRIRTGNQNQTSFYPFVPHEISVLV 60
           MNAWLPQASYPCGNFSDTSSFKFRRSKGSIGHAFTVRIRTGNQNQTSFYPFVPHEISVLV
Sbjct: 16  MNAWLPQASYPCGNFSDTSSFKFRRSKGSIGHAFTVRIRTGNQNQTSFYPFVPHEISVLV 75

Query: 61  ELILGHLRYLLTDVPPQPNSPPDNVFRPDRPTEVGLGSKKRGSAPLPIHGISKITLKVVV 120
           ELILGHLRYLLTDVPPQPNSPPDNVFRPDRPT+VGLGSKKRGSAP PIHGI         
Sbjct: 76  ELILGHLRYLLTDVPPQPNSPPDNVFRPDRPTKVGLGSKKRGSAPPPIHGI--------- 135

Query: 121 FHFRLSAPTYPTPLKSFHKVGLESSSTGSSFPADSAKPVPLAVVSLDSRQGHRIPLVRTS 180
                              +GLESSSTGSSFPADSAKPVPLAVVSLDSRQG         
Sbjct: 136 -------------------IGLESSSTGSSFPADSAKPVPLAVVSLDSRQG--------- 195

Query: 181 SELTVRRPGKAPEGAVPSPSPGRHAATRSRRGSSSSSPPTADGFGTGTPVPSPQSQSFSR 240
                    + P+G VPSPSP RHA+TRSRRGSSSSSPPTADGF TGTPVPSPQSQSFSR
Sbjct: 196 ---------QGPKGPVPSPSPDRHASTRSRRGSSSSSPPTADGFETGTPVPSPQSQSFSR 255

Query: 241 GYGSILPTSLAYIVPLTRGCSPWRPDAVMSTTGRGRHSVLQIFKGRRGRTGHHATCDALP 300
           GYGSILPTSLAYIVP TRGCSPWRPDAVMSTTG GRHSVL+IFKGR+GRTGHHATC ALP
Sbjct: 256 GYGSILPTSLAYIVPSTRGCSPWRPDAVMSTTGHGRHSVLRIFKGRQGRTGHHATCGALP 286

Query: 301 AAGPYLRLSRFQGGQAV 318
           AAGPYLRLSRFQGGQA+
Sbjct: 316 AAGPYLRLSRFQGGQAI 286

[Close]

BLAST of CmoCh15G010580 vs. NCBI nr
Match: gi|922327209|ref|XP_013442997.1| (senescence-associated protein, putative [Medicago truncatula])

HSP 1 Score: 492.3 bits (1266), Expect = 6.6e-136
Identity = 254/317 (80.13%), Postives = 262/317 (82.65%), Query Frame = 1


Query: 1    MNAWLPQASYPCGNFSDTSSFKFRRSKGSIGHAFTVRIRTGNQNQTSFYPFVPHEISVLV 60
            MNAWLPQASYPCGNFSDTSSFKFRRSKGSIGHAFTVRIRTGNQNQTSFYPFVPHEISVLV
Sbjct: 828  MNAWLPQASYPCGNFSDTSSFKFRRSKGSIGHAFTVRIRTGNQNQTSFYPFVPHEISVLV 887

Query: 61   ELILGHLRYLLTDVPPQPNSPPDNVFRPDRPTEVGLGSKKRGSAPLPIHGISKITLKVVV 120
            ELI GHLRYLLTDVPPQPNSPPDNVFRPDRPT+VGLGSKKRGSAP PIHGI         
Sbjct: 888  ELIFGHLRYLLTDVPPQPNSPPDNVFRPDRPTKVGLGSKKRGSAPPPIHGI--------- 947

Query: 121  FHFRLSAPTYPTPLKSFHKVGLESSSTGSSFPADSAKPVPLAVVSLDSRQGHRIPLVRTS 180
                               +GLESSSTGSSFPADSAKPVPLAVVSLDSRQG         
Sbjct: 948  -------------------IGLESSSTGSSFPADSAKPVPLAVVSLDSRQG--------- 1007

Query: 181  SELTVRRPGKAPEGAVPSPSPGRHAATRSRRGSSSSSPPTADGFGTGTPVPSPQSQSFSR 240
                     + P+G VPSPSP RHA+TRSRRGSSSSSPPTADGF TGTPVPSPQSQSFSR
Sbjct: 1008 ---------QGPKGPVPSPSPDRHASTRSRRGSSSSSPPTADGFETGTPVPSPQSQSFSR 1067

Query: 241  GYGSILPTSLAYIVPLTRGCSPWRPDAVMSTTGRGRHSVLQIFKGRRGRTGHHATCDALP 300
            GYGSILPTSLAYIVP TRGCSPWRPDAVMSTTG GRHSVL+IFKGR+GRTGHHATC ALP
Sbjct: 1068 GYGSILPTSLAYIVPSTRGCSPWRPDAVMSTTGHGRHSVLRIFKGRQGRTGHHATCGALP 1098

Query: 301  AAGPYLRLSRFQGGQAV 318
            AAGPYLRLSRFQGGQA+
Sbjct: 1128 AAGPYLRLSRFQGGQAI 1098

The following BLAST results are available for this feature:

BLAST of CmoCh15G010580 vs. Swiss-Prot


Match Name	E-value	Identity	Description
ART2_YEAST	5.2e-16	76.79	Putative uncharacterized protein ART2 OS=Saccharomyces cerevisiae (strain ATCC 2...	[more]
RRT15_YEAST	1.5e-10	76.09	Regulator of rDNA transcription protein 15 OS=Saccharomyces cerevisiae (strain A...	[more]

BLAST of CmoCh15G010580 vs. TrEMBL


Match Name	E-value	Identity	Description
I1LXS9_SOYBN	3.2e-145	84.23	Uncharacterized protein OS=Glycine max PE=4 SV=1	[more]
A0A072TJF5_MEDTR	1.1e-142	83.60	Senescence-associated protein, putative OS=Medicago truncatula GN=MTR_0055s0050 ...	[more]
A0A0D2ZQ58_BRAOL	4.0e-140	81.62	Uncharacterized protein OS=Brassica oleracea var. oleracea PE=4 SV=1	[more]
I1LXQ4_SOYBN	1.4e-137	80.76	Uncharacterized protein OS=Glycine max PE=4 SV=1	[more]
I1LXT0_SOYBN	1.4e-137	80.76	Uncharacterized protein OS=Glycine max PE=4 SV=1	[more]

BLAST of CmoCh15G010580 vs. TAIR10


Match Name	E-value	Identity	Description

BLAST of CmoCh15G010580 vs. NCBI nr


Match Name	E-value	Identity	Description
gi\|922327141\|ref\|XP_013442963.1\|	1.6e-142	83.60	senescence-associated protein, putative [Medicago truncatula]	[more]
gi\|922327219\|ref\|XP_013443002.1\|	7.7e-137	80.76	senescence-associated protein [Medicago truncatula]	[more]
gi\|922327147\|ref\|XP_013442966.1\|	2.3e-136	80.44	senescence-associated protein [Medicago truncatula]	[more]
gi\|922327153\|ref\|XP_013442969.1\|	2.3e-136	80.44	senescence-associated protein [Medicago truncatula]	[more]
gi\|922327209\|ref\|XP_013442997.1\|	6.6e-136	80.13	senescence-associated protein, putative [Medicago truncatula]	[more]

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **INTERPRO**
Term	Definition

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0008150	biological_process
cellular_component	GO:0005575	cellular_component
molecular_function	GO:0003674	molecular_function

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CmoCh15G010580.1	CmoCh15G010580.1	mRNA

InterPro

Analysis Name: InterPro Annotations of Cucurbita moschata
Date Performed: 2017-05-19


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	PANTHER	PTHR33047	FAMILY NOT NAMED	coord: 1..111 score: 3.2E-211coord: 189..317 score: 3.2E-211coord: 140..170 score: 3.2E
None	No IPR available	PANTHER	PTHR33047:SF4	SUBFAMILY NOT NAMED	coord: 189..317 score: 3.2E-211coord: 140..170 score: 3.2E-211coord: 1..111 score: 3.2E

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
CmoCh15G010580	Lsi09G009970	Bottle gourd (USVL1VR-Ls)	cmolsiB257

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:


Gene	Organism	Block
CmoCh15G010580	Watermelon (97103) v1	cmowmB242
CmoCh15G010580	Cucurbita pepo (Zucchini)	cmocpeB268
CmoCh15G010580	Cucurbita pepo (Zucchini)	cmocpeB293
CmoCh15G010580	Bottle gourd (USVL1VR-Ls)	cmolsiB247
CmoCh15G010580	Cucumber (Gy14) v2	cgybcmoB575
CmoCh15G010580	Cucumber (Gy14) v2	cgybcmoB593
CmoCh15G010580	Melon (DHL92) v3.6.1	cmomedB274
CmoCh15G010580	Silver-seed gourd	carcmoB0691
CmoCh15G010580	Cucumber (Chinese Long) v3	cmocucB0338
CmoCh15G010580	Cucumber (Chinese Long) v3	cmocucB0355
CmoCh15G010580	Watermelon (97103) v2	cmowmbB266
CmoCh15G010580	Wax gourd	cmowgoB0371
CmoCh15G010580	Cucurbita moschata (Rifu)	cmocmoB251
CmoCh15G010580	Cucumber (Gy14) v1	cgycmoB0598
CmoCh15G010580	Cucumber (Gy14) v1	cgycmoB0600
CmoCh15G010580	Cucurbita maxima (Rimu)	cmacmoB287
CmoCh15G010580	Cucurbita maxima (Rimu)	cmacmoB584
CmoCh15G010580	Wild cucumber (PI 183967)	cmocpiB303
CmoCh15G010580	Cucumber (Chinese Long) v2	cmocuB279
CmoCh15G010580	Cucumber (Chinese Long) v2	cmocuB293
CmoCh15G010580	Melon (DHL92) v3.5.1	cmomeB242
CmoCh15G010580	Watermelon (Charleston Gray)	cmowcgB243