Lsi09G010840 (gene) Bottle gourd (USVL1VR-Ls)
The following sequences are available for this feature:
Legend: five_prime_UTRCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.TGGAAGTTACCCATCAATATCACTATGAAAGCTACCATTCTCCCTCCACATTACACCAACCAGCTTTCCTTCAAAATTATTCATTCGATAAATGACTCATGCCCTTTCCTTCTCTTAATTCCCATCTCCAACCATGGCTTCCAAATCATGGCCTTTTTTTCTAATCTGCCTTGCCTTTCTATTCCCTTCCGCGATCGGCCAGGCCCCGGCACAGCCACCCAGCTTGCCAACCGTCTCCCCACCGCCTTCTACCCCACCTCCGACCGCAACAACTCCTCCACCCTTGTCAACACCACCTCCTACTGTTGCACCTTCTACAAGCCCAACCATTCCACCACCCCAACCACCACAAAGTTCACCCATCTCGCCCCCGTCGCTACCACCAGCATTGCCACCTCCGCGCGCTACGCCTCCGCCATTGCCGCCTCCTTTGCCACCACCACAAGTCTCTCCAACTCCTTCACAGACACCACCGGTGCCAGCTCCCACCCTAGCACCATTACCAACTCCGCCAACACCAATGCCTTCACCACCAACACCAGCACCCGTCGCGGTGCCAGAATTATCCCCTGCACCCGCACCGGGAAAGCATAAGCGTAGGAGGCATCACAAACATAAGAAGCATCAAGCACCGGCCCCGGCCCCAACCGTCCCGAGCCCACCGGCACCACCTACGGTGGTGGATTCACAAGATAGCACAGCGCCAGCACCCTCACCAAATCTGGTAAAGTTTTATTTGTTTTCATTATTATTTAGATATCTCTATGATTAATGAAGATTAATAAAAAAAAAAAAAATATGTAAGATATATTGTAATTAGAGAATTTGAGTTGGAGAGTTCTGTTGTTAATACCATATTTTATGTTTATGAACAGAATGGAGGAGAGCCAATGAAAGGAAAGGTGGGAACATGGACTAGAGTTGTATTCGGATTCACACTTCTGGTTGCTACCACGGGCTTCAATTTCTAATTTTGAAGAGAGGATTATTCACAAGGAACCCATTATGGTTCATAATATTATAGAATTTGGCCCAGAATCTGAGAGAAGTATTTCATATATATCATTTTTTGTTCAATGATTTGTGGATTGGATTGGAATAATAATGAATTTTTTTTTTATTTTGGTAATTAATAATAATCTTCAAGTTTCAAAGCTGATCCTCATTAATCTCAATCATGTTGAAAATTAAAAGATGATTGGTCCATGAACTATGATTTGGATAACATATATTGGAAACTGGTGAGAATTCATATTTGAT TGGAAGTTACCCATCAATATCACTATGAAAGCTACCATTCTCCCTCCACATTACACCAACCAGCTTTCCTTCAAAATTATTCATTCGATAAATGACTCATGCCCTTTCCTTCTCTTAATTCCCATCTCCAACCATGGCTTCCAAATCATGGCCTTTTTTTCTAATCTGCCTTGCCTTTCTATTCCCTTCCGCGATCGGCCAGGCCCCGGCACAGCCACCCAGCTTGCCAACCGTCTCCCCACCGCCTTCTACCCCACCTCCGACCGCAACAACTCCTCCACCCTTGTCAACACCACCTCCTACTGTTGCACCTTCTACAAGCCCAACCATTCCACCACCCCAACCACCACAAAGTTCACCCATCTCGCCCCCGTCGCTACCACCAGCATTGCCACCTCCGCGCGCTACGCCTCCGCCATTGCCGCCTCCTTTGCCACCACCACAAGTCTCTCCAACTCCTTCACAGACACCACCGGTGCCAGCTCCCACCCTAGCACCATTACCAACTCCGCCAACACCAATGCCTTCACCACCAACACCAGCACCCGTCGCGGTGCCAGAATTATCCCCTGCACCCGCACCGGGAAAGCATAAGCGTAGGAGGCATCACAAACATAAGAAGCATCAAGCACCGGCCCCGGCCCCAACCGTCCCGAGCCCACCGGCACCACCTACGGTGGTGGATTCACAAGATAGCACAGCGCCAGCACCCTCACCAAATCTGAATGGAGGAGAGCCAATGAAAGGAAAGGTGGGAACATGGACTAGAGTTGTATTCGGATTCACACTTCTGGTTGCTACCACGGGCTTCAATTTCTAATTTTGAAGAGAGGATTATTCACAAGGAACCCATTATGGTTCATAATATTATAGAATTTGGCCCAGAATCTGAGAGAAGTATTTCATATATATCATTTTTTGTTCAATGATTTGTGGATTGGATTGGAATAATAATGAATTTTTTTTTTATTTTGGTAATTAATAATAATCTTCAAGTTTCAAAGCTGATCCTCATTAATCTCAATCATGTTGAAAATTAAAAGATGATTGGTCCATGAACTATGATTTGGATAACATATATTGGAAACTGGTGAGAATTCATATTTGAT ATGGCTTCCAAATCATGGCCTTTTTTTCTAATCTGCCTTGCCTTTCTATTCCCTTCCGCGATCGGCCAGGCCCCGGCACAGCCACCCAGCTTGCCAACCGTCTCCCCACCGCCTTCTACCCCACCTCCGACCGCAACAACTCCTCCACCCTTGTCAACACCACCTCCTACTGTTGCACCTTCTACAAGCCCAACCATTCCACCACCCCAACCACCACAAAGTTCACCCATCTCGCCCCCGTCGCTACCACCAGCATTGCCACCTCCGCGCGCTACGCCTCCGCCATTGCCGCCTCCTTTGCCACCACCACAAGTCTCTCCAACTCCTTCACAGACACCACCGGTGCCAGCTCCCACCCTAGCACCATTACCAACTCCGCCAACACCAATGCCTTCACCACCAACACCAGCACCCGTCGCGGTGCCAGAATTATCCCCTGCACCCGCACCGGGAAAGCATAAGCGTAGGAGGCATCACAAACATAAGAAGCATCAAGCACCGGCCCCGGCCCCAACCGTCCCGAGCCCACCGGCACCACCTACGGTGGTGGATTCACAAGATAGCACAGCGCCAGCACCCTCACCAAATCTGAATGGAGGAGAGCCAATGAAAGGAAAGGTGGGAACATGGACTAGAGTTGTATTCGGATTCACACTTCTGGTTGCTACCACGGGCTTCAATTTCTAA MASKSWPFFLICLAFLFPSAIGQAPAQPPSLPTVSPPPSTPPPTATTPPPLSTPPPTVAPSTSPTIPPPQPPQSSPISPPSLPPALPPPRATPPPLPPPLPPPQVSPTPSQTPPVPAPTLAPLPTPPTPMPSPPTPAPVAVPELSPAPAPGKHKRRRHHKHKKHQAPAPAPTVPSPPAPPTVVDSQDSTAPAPSPNLNGGEPMKGKVGTWTRVVFGFTLLVATTGFNF
BLAST of Lsi09G010840 vs. Swiss-Prot
Match: AGP19_ARATH (Lysine-rich arabinogalactan protein 19 OS=Arabidopsis thaliana GN=AGP19 PE=2 SV=2) HSP 1 Score: 92.8 bits (229), Expect = 5.1e-18 Identity = 110/253 (43.48%), Postives = 131/253 (51.78%), Query Frame = 1
BLAST of Lsi09G010840 vs. TrEMBL
Match: A0A0A0LHJ4_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_2G115750 PE=4 SV=1) HSP 1 Score: 306.2 bits (783), Expect = 3.3e-80 Identity = 192/230 (83.48%), Postives = 201/230 (87.39%), Query Frame = 1
BLAST of Lsi09G010840 vs. TrEMBL
Match: A0A067FVG5_CITSI (Uncharacterized protein OS=Citrus sinensis GN=CISIN_1g023867mg PE=4 SV=1) HSP 1 Score: 167.2 bits (422), Expect = 2.4e-38 Identity = 143/280 (51.07%), Postives = 167/280 (59.64%), Query Frame = 1
BLAST of Lsi09G010840 vs. TrEMBL
Match: A0A061ECT3_THECC (Uncharacterized protein OS=Theobroma cacao GN=TCM_011899 PE=4 SV=1) HSP 1 Score: 129.4 bits (324), Expect = 5.5e-27 Identity = 122/265 (46.04%), Postives = 150/265 (56.60%), Query Frame = 1
BLAST of Lsi09G010840 vs. TrEMBL
Match: A9PG83_POPTR (Uncharacterized protein OS=Populus trichocarpa GN=POPTR_0010s14250g PE=2 SV=1) HSP 1 Score: 129.0 bits (323), Expect = 7.2e-27 Identity = 120/248 (48.39%), Postives = 142/248 (57.26%), Query Frame = 1
BLAST of Lsi09G010840 vs. TrEMBL
Match: W9R2D8_9ROSA (Uncharacterized protein OS=Morus notabilis GN=L484_025822 PE=4 SV=1) HSP 1 Score: 122.1 bits (305), Expect = 8.8e-25 Identity = 127/269 (47.21%), Postives = 150/269 (55.76%), Query Frame = 1
BLAST of Lsi09G010840 vs. TAIR10
Match: AT1G68725.1 (AT1G68725.1 arabinogalactan protein 19) HSP 1 Score: 92.8 bits (229), Expect = 2.9e-19 Identity = 110/253 (43.48%), Postives = 131/253 (51.78%), Query Frame = 1
BLAST of Lsi09G010840 vs. NCBI nr
Match: gi|778668213|ref|XP_011649058.1| (PREDICTED: lysine-rich arabinogalactan protein 19-like [Cucumis sativus]) HSP 1 Score: 306.2 bits (783), Expect = 4.7e-80 Identity = 192/230 (83.48%), Postives = 201/230 (87.39%), Query Frame = 1
BLAST of Lsi09G010840 vs. NCBI nr
Match: gi|700206281|gb|KGN61400.1| (hypothetical protein Csa_2G115750 [Cucumis sativus]) HSP 1 Score: 306.2 bits (783), Expect = 4.7e-80 Identity = 192/230 (83.48%), Postives = 201/230 (87.39%), Query Frame = 1
BLAST of Lsi09G010840 vs. NCBI nr
Match: gi|659114696|ref|XP_008457186.1| (PREDICTED: lysine-rich arabinogalactan protein 19 [Cucumis melo]) HSP 1 Score: 304.7 bits (779), Expect = 1.4e-79 Identity = 193/230 (83.91%), Postives = 199/230 (86.52%), Query Frame = 1
BLAST of Lsi09G010840 vs. NCBI nr
Match: gi|641851274|gb|KDO70145.1| (hypothetical protein CISIN_1g023867mg [Citrus sinensis]) HSP 1 Score: 167.2 bits (422), Expect = 3.4e-38 Identity = 143/280 (51.07%), Postives = 167/280 (59.64%), Query Frame = 1
BLAST of Lsi09G010840 vs. NCBI nr
Match: gi|568861793|ref|XP_006484384.1| (PREDICTED: lysine-rich arabinogalactan protein 19 [Citrus sinensis]) HSP 1 Score: 164.9 bits (416), Expect = 1.7e-37 Identity = 142/287 (49.48%), Postives = 167/287 (58.19%), Query Frame = 1
The following BLAST results are available for this feature:
GO Assignments
This gene is annotated with the following GO terms.
The following mRNA feature(s) are a part of this gene:
The following gene(s) are orthologous to this gene:
The following gene(s) are paralogous to this gene: None The following block(s) are covering this gene:
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